Query 033144
Match_columns 126
No_of_seqs 151 out of 1067
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 17:00:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 6.5E-44 2.2E-48 242.2 13.3 113 2-116 7-120 (125)
2 2h2y_A Ubiquitin-conjugating e 100.0 3.1E-43 1.1E-47 242.0 14.3 113 2-116 21-134 (136)
3 4gpr_A Ubiquitin-conjugating e 100.0 2.4E-43 8E-48 246.3 13.8 116 1-118 4-119 (151)
4 2ayv_A Ubiquitin-conjugating e 100.0 4.8E-43 1.6E-47 248.2 14.6 115 1-117 21-135 (166)
5 1z2u_A Ubiquitin-conjugating e 100.0 4.2E-43 1.4E-47 244.8 12.9 114 1-116 4-117 (150)
6 2r0j_A Ubiquitin carrier prote 100.0 3.7E-43 1.3E-47 244.8 12.7 114 2-117 2-115 (149)
7 2c4o_A Ubiquitin-conjugating e 100.0 8.2E-43 2.8E-47 246.8 14.0 114 1-116 19-132 (165)
8 1fxt_A Ubiquitin-conjugating e 100.0 3E-43 1E-47 245.3 11.4 115 1-117 1-117 (149)
9 2c2v_B Ubiquitin-conjugating e 100.0 4.5E-43 1.5E-47 245.6 11.5 114 2-117 6-119 (154)
10 1ayz_A UBC2, ubiquitin-conjuga 100.0 9.2E-43 3.1E-47 247.4 13.2 113 2-116 5-117 (169)
11 1zdn_A Ubiquitin-conjugating e 100.0 1.3E-42 4.6E-47 244.1 13.6 117 2-120 14-130 (158)
12 1jat_A Ubiquitin-conjugating e 100.0 8.9E-43 3.1E-47 244.3 12.6 115 1-117 5-119 (155)
13 2e2c_A Ubiquitin conjugating e 100.0 1.3E-42 4.5E-47 243.7 13.3 115 1-117 9-123 (156)
14 3h8k_A Ubiquitin-conjugating e 100.0 2.7E-42 9.2E-47 243.8 14.3 115 2-118 4-132 (164)
15 2ucz_A UBC7, ubiquitin conjuga 100.0 3.8E-42 1.3E-46 243.3 14.7 115 2-118 5-133 (165)
16 2a7l_A Hypothetical ubiquitin- 100.0 1.7E-42 5.8E-47 238.3 12.3 109 3-113 24-136 (136)
17 1yh2_A HSPC150 protein similar 100.0 3.9E-42 1.3E-46 244.2 14.5 114 2-117 5-122 (169)
18 2aak_A UBC1, ubiquitin conjuga 100.0 2.7E-42 9.4E-47 241.1 13.4 114 2-117 5-118 (152)
19 1i7k_A Ubiquitin-conjugating e 100.0 2.4E-42 8.3E-47 247.1 12.7 117 1-119 30-146 (179)
20 3rcz_B SUMO-conjugating enzyme 100.0 6.6E-42 2.2E-46 241.7 12.8 114 2-117 11-131 (163)
21 2awf_A Ubiquitin-conjugating e 100.0 1.4E-41 4.7E-46 241.9 14.4 117 1-119 17-147 (172)
22 3rz3_A Ubiquitin-conjugating e 100.0 1.7E-41 5.6E-46 243.6 14.2 114 2-117 8-135 (183)
23 3bzh_A Ubiquitin-conjugating e 100.0 2E-41 6.7E-46 245.1 14.5 113 2-116 49-161 (194)
24 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2E-41 6.8E-46 244.9 13.3 116 1-118 32-161 (193)
25 1yrv_A Ubiquitin-conjugating l 100.0 8.9E-42 3E-46 242.3 11.2 115 2-118 24-141 (169)
26 2bep_A Ubiquitin-conjugating e 100.0 3.3E-41 1.1E-45 237.2 13.7 114 2-117 9-126 (159)
27 2pwq_A Ubiquitin conjugating e 100.0 1.2E-41 4.2E-46 249.7 11.8 115 2-118 24-139 (216)
28 3k9o_A Ubiquitin-conjugating e 100.0 5.8E-41 2E-45 243.8 13.9 117 1-119 5-125 (201)
29 2gjd_A Ubiquitin-conjugating e 100.0 3.8E-41 1.3E-45 236.5 12.2 114 2-117 5-125 (157)
30 1wzv_A Ubiquitin-conjugating e 100.0 4.7E-41 1.6E-45 235.5 12.3 114 1-117 4-119 (155)
31 2a4d_A Ubiquitin-conjugating e 100.0 2.5E-40 8.5E-45 232.9 14.0 111 2-114 26-143 (160)
32 2grr_A Ubiquitin-conjugating e 100.0 1.3E-40 4.4E-45 234.7 12.4 114 2-117 8-128 (161)
33 1tte_A Ubiquitin-conjugating e 100.0 3E-41 1E-45 247.4 8.0 115 1-117 2-118 (215)
34 1y8x_A Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44 232.5 12.7 111 2-117 7-118 (160)
35 2q0v_A Ubiquitin-conjugating e 100.0 8.2E-40 2.8E-44 229.5 12.8 117 2-121 22-145 (156)
36 3e46_A Ubiquitin-conjugating e 100.0 1E-39 3.5E-44 244.2 13.8 116 2-119 58-177 (253)
37 2nvu_C NEDD8-conjugating enzym 100.0 7.7E-40 2.6E-44 234.4 12.0 112 2-118 27-139 (180)
38 1jat_B Ubiquitin-conjugating e 100.0 1.1E-39 3.9E-44 224.7 12.4 118 2-122 7-131 (138)
39 1c4z_D UBCH7, ubiquitin conjug 100.0 3.8E-40 1.3E-44 230.7 9.8 114 1-117 2-117 (154)
40 2hlw_A Ubiquitin-conjugating e 100.0 8.9E-40 3.1E-44 232.1 11.2 112 2-115 36-154 (170)
41 3fn1_B NEDD8-conjugating enzym 100.0 2E-39 6.7E-44 229.7 12.5 111 2-115 15-132 (167)
42 2y9m_A Ubiquitin-conjugating e 100.0 3.7E-39 1.3E-43 229.4 13.4 115 2-118 7-136 (172)
43 4ddg_A Ubiquitin-conjugating e 100.0 3.9E-39 1.3E-43 254.5 12.9 118 1-120 3-120 (399)
44 2onu_A Ubiquitin-conjugating e 100.0 4.4E-40 1.5E-44 230.1 6.4 110 2-116 3-114 (152)
45 2z5d_A Ubiquitin-conjugating e 100.0 3E-39 1E-43 231.0 8.4 110 2-117 26-137 (179)
46 2f4w_A Ubiquitin-conjugating e 100.0 2.6E-38 8.7E-43 227.7 13.2 112 1-116 14-128 (187)
47 3o2u_A NEDD8-conjugating enzym 100.0 2E-38 6.7E-43 228.8 12.3 115 2-121 30-151 (190)
48 1zuo_A Hypothetical protein LO 100.0 8.9E-39 3E-43 229.9 8.8 114 2-117 28-158 (186)
49 4ds2_A Ubiquitin-conjugating e 100.0 1.5E-38 5.3E-43 225.2 9.1 111 2-113 9-133 (167)
50 1yf9_A Ubiquitin carrier prote 100.0 3.5E-38 1.2E-42 224.2 9.0 109 2-116 13-123 (171)
51 3ceg_A Baculoviral IAP repeat- 100.0 1.8E-36 6.1E-41 232.7 13.0 110 2-113 77-203 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 9.4E-32 3.2E-36 188.3 2.9 105 3-114 34-153 (172)
53 3kpa_A Probable ubiquitin fold 99.8 2.4E-21 8.1E-26 133.2 3.8 105 3-114 36-155 (168)
54 3r3q_A Suppressor protein STP2 99.8 1.5E-19 5E-24 127.0 8.2 109 4-115 31-157 (162)
55 3obq_A Tumor susceptibility ge 99.6 2.5E-15 8.5E-20 103.8 7.0 102 5-114 24-138 (146)
56 2ebm_A RWD domain-containing p 97.0 0.005 1.7E-07 40.5 8.1 66 4-71 13-78 (128)
57 3zqs_A E3 ubiquitin-protein li 96.8 0.027 9.1E-07 39.9 10.8 86 4-115 4-89 (186)
58 2day_A Ring finger protein 25; 96.7 0.015 5E-07 38.1 8.5 67 5-71 12-82 (128)
59 2yz0_A Serine/threonine-protei 96.6 0.028 9.7E-07 37.2 9.6 67 5-72 14-86 (138)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 95.3 0.13 4.3E-06 33.9 8.0 67 4-71 13-86 (137)
61 2ebk_A RWD domain-containing p 94.5 0.1 3.4E-06 34.1 5.9 65 5-70 11-78 (128)
62 2dax_A Protein C21ORF6; RWD do 91.8 0.12 4.2E-06 34.8 3.0 24 49-72 74-97 (152)
63 2daw_A RWD domain containing p 91.7 0.17 5.8E-06 34.3 3.7 24 49-72 76-99 (154)
64 3u3c_B Paxillin LD2 peptide; 4 74.4 2.5 8.5E-05 19.5 2.0 19 3-21 7-25 (26)
65 2bum_A Protocatechuate 3,4-dio 49.3 17 0.00058 25.7 3.6 25 46-70 109-138 (209)
66 3rls_A YAF9, protein AF-9 homo 38.6 95 0.0032 21.4 6.1 43 28-72 30-72 (175)
67 2bum_B Protocatechuate 3,4-dio 32.1 28 0.00094 25.3 2.4 25 46-70 134-165 (241)
68 3qrl_A Transcription initiatio 31.1 1.2E+02 0.004 20.1 5.6 43 30-74 32-77 (140)
69 3t63_M 3,4-PCD, protocatechuat 30.9 30 0.001 25.1 2.4 25 46-70 133-164 (238)
70 2xsu_A Catechol 1,2 dioxygenas 30.4 29 0.001 26.1 2.4 25 46-70 187-229 (312)
71 2azq_A Catechol 1,2-dioxygenas 29.6 31 0.001 26.0 2.4 24 47-70 184-225 (311)
72 3t63_A 3,4-PCD, protocatechuat 29.6 36 0.0012 23.9 2.6 23 48-70 102-129 (200)
73 1tmx_A Hydroxyquinol 1,2-dioxy 29.5 31 0.0011 25.7 2.4 25 46-70 183-225 (293)
74 3pft_A Flavin reductase; desul 29.2 31 0.001 22.8 2.2 30 63-92 43-75 (157)
75 3g9r_A Fusion complex of HIV-1 28.9 37 0.0013 17.6 1.9 13 3-15 30-42 (42)
76 3n9t_A PNPC; phospholipid bind 28.6 33 0.0011 25.6 2.4 24 47-70 181-222 (290)
77 2boy_A 3-chlorocatechol 1,2-di 27.6 36 0.0012 24.8 2.4 24 47-70 154-195 (254)
78 1dmh_A 1,2-CTD, catechol 1,2-d 26.8 37 0.0013 25.5 2.4 24 47-70 187-228 (311)
79 3hhy_A 1,2-CTD, catechol 1,2-d 25.9 36 0.0012 25.2 2.2 24 47-70 183-224 (280)
80 3th1_A Chlorocatechol 1,2-diox 25.4 62 0.0021 23.7 3.4 24 47-70 151-192 (260)
81 2ccv_A Helix pomatia agglutini 22.5 1.4E+02 0.0048 18.3 4.2 24 47-71 28-51 (101)
82 2jrw_A Cyclic extended PEP.1; 20.7 19 0.00065 16.5 -0.1 8 69-76 12-19 (26)
83 2ecu_A Flavin reductase (HPAC) 20.7 27 0.00092 22.8 0.5 31 62-92 40-73 (149)
84 1m46_B IQ4, IQ4 motif from MYO 20.6 67 0.0023 14.6 1.7 11 3-13 10-20 (26)
85 1b33_N Phycobilisome 7.8 KD li 20.5 97 0.0033 17.9 2.9 26 3-28 33-58 (67)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-44 Score=242.24 Aligned_cols=113 Identities=34% Similarity=0.687 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccc-ccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKV-FHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPnV~~ 80 (126)
|.+||++|++++++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
+|+||+++|+++|+|+++|++||+ +|+++|.+..
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~--si~~ll~~p~ 120 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVL--SIISMLSSAK 120 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHH--HHHHHHC---
T ss_pred CCEEEchhcCCCCCCCCcHHHHHH--HHHHHHhCcc
Confidence 999999999999999999999999 9999998654
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-43 Score=242.03 Aligned_cols=113 Identities=33% Similarity=0.687 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccc-ccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKV-FHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPnV~~ 80 (126)
|.+||++|++++++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
+|+||+++|+++|+|+++|++||+ +|+++|.+.+
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~vL~--si~sll~~p~ 134 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISGLIL--SIISMLSSAK 134 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHH--HHHHHHSSSC
T ss_pred CCEEECccccCCCCCCCcHHHHHH--HHHHHHhCcC
Confidence 999999999999999999999999 9999998653
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.4e-43 Score=246.33 Aligned_cols=116 Identities=61% Similarity=1.179 Sum_probs=111.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|+||+++|.++|+|+++|++||+ +|+++|.....-
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~p~~~ 119 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLL--SISSLLTDPNPS 119 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHCCCTT
T ss_pred CCEEEcccccCCCCCCCcHHHHHH--HHHHHhcCCCCC
Confidence 999999999999999999999999 999999975543
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-43 Score=248.20 Aligned_cols=115 Identities=69% Similarity=1.237 Sum_probs=110.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
+|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
+|.||+++|+++|+|+++|++||+ +|+++|.+...
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~--sI~sll~~pn~ 135 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLL--SISSLLTDPNP 135 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCT
T ss_pred CCeEEcccccccCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 999999999999999999999999 99999986543
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=4.2e-43 Score=244.80 Aligned_cols=114 Identities=69% Similarity=1.253 Sum_probs=110.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
+|.||+++|+++|+|+++|++||+ +|+++|....
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~pn 117 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLL--SICSLLCDPN 117 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHH--HHHHHhhCCC
Confidence 999999999999999999999999 9999998654
No 6
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=3.7e-43 Score=244.84 Aligned_cols=114 Identities=43% Similarity=0.866 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 82 GNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
|+||+++|+++|+|+++|++||+ +|+++|.+...
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~p~~ 115 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLL--SIQALLSSPEP 115 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHH--HHHHHHHSCCT
T ss_pred CEEechhcCCCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 99999999999999999999999 99999986544
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=8.2e-43 Score=246.81 Aligned_cols=114 Identities=72% Similarity=1.274 Sum_probs=110.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
+|.||+++|+++|+|+++|++||+ +|+++|....
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~--si~~ll~~pn 132 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLL--SICSLLCDPN 132 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHH--HHHHHHhCCC
Confidence 999999999999999999999999 9999998654
No 8
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3e-43 Score=245.29 Aligned_cols=115 Identities=47% Similarity=0.899 Sum_probs=110.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCC-CCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~-n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 79 (126)
||.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6889999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 80 S-NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
. +|.||+++|.++|+|+++|++||+ +|+++|.+...
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~p~~ 117 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALI--SLQALLQSPEP 117 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHH--HHHHHHHSCCS
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 8 999999999999999999999999 99999986553
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-43 Score=245.63 Aligned_cols=114 Identities=39% Similarity=0.799 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 82 GNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
|.||+++|+++|+|+++|++||+ +|+++|.+...
T Consensus 86 G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~pn~ 119 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRTVLL--SIQALLSAPNP 119 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHHHHH--HHHHHTTSCCC
T ss_pred CeEEchhccCCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 99999999999999999999999 99999986543
No 10
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.2e-43 Score=247.37 Aligned_cols=113 Identities=36% Similarity=0.887 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 82 GNICLDILKEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
|.||+++|+++|+|+++|++||+ +|+++|....
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~--si~~ll~~Pn 117 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILT--SIQSLFNDPN 117 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHH--HHHHHHTCCC
T ss_pred CeEeehhhccCCCCcCcHHHHHH--HHHHHHhCCC
Confidence 99999999999999999999999 9999998654
No 11
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-42 Score=244.15 Aligned_cols=117 Identities=36% Similarity=0.694 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhhh
Q 033144 82 GNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLEK 120 (126)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~~ 120 (126)
|.||+++|.++|+|+++|++||+ +|+++|.....-..
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~--~i~~ll~~pn~~~p 130 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLL--TIKCLLIHPNPESA 130 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHH--HHHHHHHSCCGGGC
T ss_pred CEEehhhcCCCCCCCCcHHHHHH--HHHHHHhCCCCCCc
Confidence 99999999999999999999999 99999987654433
No 12
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=8.9e-43 Score=244.32 Aligned_cols=115 Identities=43% Similarity=0.798 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
.|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
+|.||+++|.++|+|+++|++||+ +|+++|.....
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~p~~ 119 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLL--SIQALLASPNP 119 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCT
T ss_pred CCEEEchhhccCCCCCCCHHHHHH--HHHHHHhCCCC
Confidence 999999999999999999999999 99999987543
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-42 Score=243.70 Aligned_cols=115 Identities=39% Similarity=0.780 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
.|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 88 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ 88 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
+|.||+++|.++|+|+++|++||+ +|+++|.....
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~--si~~ll~~pn~ 123 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILL--SLQSLLGEPNN 123 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHTTSCCC
T ss_pred CceEECccccccCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 999999999999999999999999 99999986543
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.7e-42 Score=243.76 Aligned_cols=115 Identities=38% Similarity=0.854 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCC-CCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~-n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
|.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 789999999999999999999998876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCC-------------CCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 81 NGNICLDILK-------------EQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|+||+++|. ++|+|+++|++||+ +|+++|.+...-
T Consensus 84 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~--~i~~ll~~pn~~ 132 (164)
T 3h8k_A 84 DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILL--SVVSMLAEPNDE 132 (164)
T ss_dssp TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHH--HHHHHHHSCCCS
T ss_pred CCcEeeecccCcccccccccccccCCCCCCcHHHHHH--HHHHHHcCCCCC
Confidence 9999999997 88999999999999 999999875543
No 15
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-42 Score=243.27 Aligned_cols=115 Identities=42% Similarity=0.904 Sum_probs=109.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecC-CCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVA-EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~-~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
|.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 68999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCC-------------CCCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 81 NGNICLDIL-------------KEQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 81 ~G~icl~~l-------------~~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|+||+++| .++|+|+++|++||+ +|+++|.....-
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~--si~~ll~~Pn~~ 133 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILL--SVMSMLSEPNIE 133 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHH--HHHHHHHSCCGG
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHH--HHHHHHhCCCCC
Confidence 999999999 689999999999999 999999875543
No 16
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-42 Score=238.30 Aligned_cols=109 Identities=37% Similarity=0.753 Sum_probs=104.9
Q ss_pred HHHHHHHHHHhhcCCCCCeEEe--ecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccc--cccc
Q 033144 3 SKRILKELRDLQRDPPTSCSAG--PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVF--HPNI 78 (126)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~--~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~--HPnV 78 (126)
.+||++|++++++++++|+.+. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 3999999999999999999865 88899999999999999999999999999999999999999999999999 9999
Q ss_pred cCCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHh
Q 033144 79 NSNGNICLDILKEQWSPALTISKVTIFNNLQNYMK 113 (126)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~ 113 (126)
+.+|+||+++|+++|+|+++|++||+ +||++|+
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~--sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCL--SIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHH--HHHHHTC
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHH--HHHHHhC
Confidence 99999999999999999999999999 9999874
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-42 Score=244.16 Aligned_cols=114 Identities=37% Similarity=0.743 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCC----CCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 82 GNICLDILK----EQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 82 G~icl~~l~----~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
|.||+|+|+ ++|+|+++|++||+ +|+++|.+...
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~--si~~ll~~p~~ 122 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLT--SIQLLMSEPNP 122 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHH--HHHHHHHSCCT
T ss_pred CeEecccccCCcccCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 999999998 89999999999999 99999987544
No 18
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.7e-42 Score=241.12 Aligned_cols=114 Identities=40% Similarity=0.914 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
|.+||++|++++++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 82 GNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
|.||+++|.++|+|+++|++||+ +|+++|.....
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~p~~ 118 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILT--SIQSLLCDPNP 118 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHH--HHHHHHTSCCT
T ss_pred CEEechhhcCCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 99999999999999999999999 99999986543
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-42 Score=247.13 Aligned_cols=117 Identities=32% Similarity=0.623 Sum_probs=111.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
.|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 30 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 109 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 109 (179)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLE 119 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~ 119 (126)
+|.||+++|.++|+|+++|++||+ +|+++|.....-.
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~--sI~sll~~Pn~~~ 146 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILL--SIQSLLGEPNIDS 146 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCTTS
T ss_pred CCeEEcccCcCcCCCCCCHHHHHH--HHHHHHhCCCCcc
Confidence 999999999999999999999999 9999998655433
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-42 Score=241.74 Aligned_cols=114 Identities=33% Similarity=0.779 Sum_probs=108.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCC-----CCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccc
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAE-----DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHP 76 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~-----n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 76 (126)
|.+||++|+++|++++++|+.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999999876 899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEccCCCC--CCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 77 NINSNGNICLDILKE--QWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 77 nV~~~G~icl~~l~~--~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
||+.+|+||+++|.+ +|+|+++|++||+ +|+++|.....
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~--~i~~ll~~P~~ 131 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILL--GIQDLLDDPNI 131 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHH--HHHHHHTSCCT
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHH--HHHHHHhCCCC
Confidence 999999999999975 4999999999999 99999986544
No 21
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.4e-41 Score=241.92 Aligned_cols=117 Identities=36% Similarity=0.813 Sum_probs=108.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecC-CCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVA-EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~-~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 79 (126)
.|.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 368999999999999999999999876 6999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEccCCC-------------CCCCCcCcHHHHHhHHHHHHHHhhhhhhh
Q 033144 80 SNGNICLDILK-------------EQWSPALTISKVTIFNNLQNYMKVLHTLE 119 (126)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~~~l~~~~~~~~~~~ 119 (126)
.+|+||+++|. ++|+|+++|++||+ +|+++|.+...-.
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~--sI~sll~~Pn~~~ 147 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMI--SVISMLADPNGDS 147 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHH--HHHHHHSCC----
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHH--HHHHHHHCcCCCC
Confidence 99999999996 68999999999999 9999998654433
No 22
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.7e-41 Score=243.61 Aligned_cols=114 Identities=33% Similarity=0.784 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEe-ecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
|.|||++|+++|++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 67999999999999999999999 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCC-------------CCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 81 NGNICLDILK-------------EQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
+|+||+++|. ++|+|+++|++||+ +|+++|.....
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~--si~~ll~~Pn~ 135 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILL--SVISLLNEPNT 135 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHH--HHHHHHHSCCC
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHH--HHHHHHhCCCC
Confidence 9999999996 88999999999999 99999987543
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2e-41 Score=245.11 Aligned_cols=113 Identities=55% Similarity=1.078 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSN 81 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 81 (126)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.+++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 82 GNICLDILKEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
|.||+++|.++|+|+++|++||+ +|+++|....
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~--sI~~ll~~pn 161 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLL--SICSLLTDCN 161 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCC
T ss_pred CceechhhhccCCCcCcHHHHHH--HHHHHHhCCC
Confidence 99999999999999999999999 9999998654
No 24
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2e-41 Score=244.86 Aligned_cols=116 Identities=45% Similarity=0.834 Sum_probs=107.5
Q ss_pred ChHHHHHHHHHHhhcCCC-------------CCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeE
Q 033144 1 MASKRILKELRDLQRDPP-------------TSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKV 67 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~-------------~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v 67 (126)
+|.+||++|+++|+++++ .|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 368999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccccc-CCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 68 AFKTKVFHPNIN-SNGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 68 ~f~t~i~HPnV~-~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|.|+||||||+ .+|.||+++|.++|+|+++|++||+ +|+++|.....-
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~--sI~sll~~pnp~ 161 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALL--SIQAMLADPVPT 161 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHH--HHHHHHHSCCTT
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHH--HHHHHHhCCCCC
Confidence 999999999999 5999999999999999999999999 999999876543
No 25
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-42 Score=242.29 Aligned_cols=115 Identities=35% Similarity=0.639 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccc-cC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNI-NS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV-~~ 80 (126)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCcEEccCCC--CCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 81 NGNICLDILK--EQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 81 ~G~icl~~l~--~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|.||+++|+ ++|+|+++|++||+ +|+++|.....-
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~--sI~sll~~Pn~~ 141 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILL--ALQVMLSNPVLE 141 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHH--HHHHHHTSCCTT
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHH--HHHHHHhCCCCC
Confidence 9999999998 89999999999999 999999875443
No 26
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.3e-41 Score=237.23 Aligned_cols=114 Identities=39% Similarity=0.795 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHhhcC---CCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccc
Q 033144 2 ASKRILKELRDLQRD---PPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNI 78 (126)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 78 (126)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 679999999999985 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 79 N-SNGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
+ .+|.||+++|.++|+|+++|++||+ +|+++|.+...
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~--~i~~ll~~p~~ 126 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLL--SLQALLAAAEP 126 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCT
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 9 5999999999999999999999999 99999987654
No 27
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.2e-41 Score=249.65 Aligned_cols=115 Identities=40% Similarity=0.811 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc-C
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN-S 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~-~ 80 (126)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|.||+++|+++|+|+++|++||+ +|+++|.....-
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~--sI~sLL~~Pnp~ 139 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALL--SIQALLSDPQPD 139 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHH--HHHHHHHSCCTT
T ss_pred CCEEEchhhcccCCCCCcHHHHHH--HHHHHHhCCCCC
Confidence 899999999999999999999999 999999876543
No 28
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=5.8e-41 Score=243.85 Aligned_cols=117 Identities=38% Similarity=0.778 Sum_probs=110.0
Q ss_pred ChHHHHHHHHHHhhcC---CCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccc
Q 033144 1 MASKRILKELRDLQRD---PPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~---~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (126)
+|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4789999999999987 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhh
Q 033144 78 IN-SNGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLE 119 (126)
Q Consensus 78 V~-~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~ 119 (126)
|+ .+|.||+++|.++|+|+++|++||+ +|+++|.+.+--.
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~--~i~~ll~~p~p~~ 125 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLL--SLQALLAAAEPDD 125 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCTTS
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHH--HHHHHhcCCCCCC
Confidence 99 5999999999999999999999999 9999999765433
No 29
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.8e-41 Score=236.52 Aligned_cols=114 Identities=36% Similarity=0.791 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecC-----CCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccc
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVA-----EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHP 76 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~-----~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 76 (126)
|.+||++|++++++++++|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 67999999999999999999999875 3899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEccCCCC--CCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 77 NINSNGNICLDILKE--QWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 77 nV~~~G~icl~~l~~--~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
||+.+|.||+++|.+ +|+|+++|++||+ +|+++|.....
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~--~i~~ll~~p~~ 125 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVL--GVQDLLDSPNP 125 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHH--HHHHHHTSCCT
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 999999999999987 7999999999999 99999986543
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.7e-41 Score=235.51 Aligned_cols=114 Identities=39% Similarity=0.827 Sum_probs=108.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEE-eecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc
Q 033144 1 MASKRILKELRDLQRDPPTSCSA-GPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~-~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 79 (126)
+|.+||++|+++|++++++|+.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 37899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEEccCC-CCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 80 SNGNICLDIL-KEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
.+|.||+++| .++|+|+++|++||+ +|+++|.....
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~--~i~~ll~~p~~ 119 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLE--ALNVLVNRPNI 119 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHH--HHHHHHHSCCS
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHH--HHHHHHhCCCC
Confidence 9999999999 899999999999999 99999986543
No 31
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.5e-40 Score=232.89 Aligned_cols=111 Identities=31% Similarity=0.510 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHhhcCCCCC-eEEeec-CCC--CceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccc
Q 033144 2 ASKRILKELRDLQRDPPTS-CSAGPV-AED--MFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-i~~~~~-~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (126)
+.+||++|++++++++++| +.+.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 5689999999999998888 777773 454 899999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEEccCCC--CCCCCcCcHHHHHhHHHHHHHHhh
Q 033144 78 IN-SNGNICLDILK--EQWSPALTISKVTIFNNLQNYMKV 114 (126)
Q Consensus 78 V~-~~G~icl~~l~--~~W~p~~~i~~il~~~~l~~~~~~ 114 (126)
|+ .+|+||+++|. ++|+|+++|++||+ +||++|.+
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~--sI~~ll~~ 143 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQ--ELRRLMMS 143 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHH--HHHHHHTS
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHH--HHHHHHcc
Confidence 99 69999999998 89999999999999 99999964
No 32
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.3e-40 Score=234.65 Aligned_cols=114 Identities=33% Similarity=0.761 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecC-----CCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccc
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVA-----EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHP 76 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~-----~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 76 (126)
|.+||++|+++|++++++|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998864 5899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEEccCCCC--CCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 77 NINSNGNICLDILKE--QWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 77 nV~~~G~icl~~l~~--~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
||+.+|.||+++|.+ +|+|+++|++||+ +|+++|.....
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~--~i~~ll~~p~~ 128 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILL--GIQELLNEPNI 128 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHH--HHHHHHHSCCT
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHH--HHHHHHhCCCC
Confidence 999999999999975 8999999999999 99999986543
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=3e-41 Score=247.44 Aligned_cols=115 Identities=45% Similarity=0.886 Sum_probs=109.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCC-CceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAED-MFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n-~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 79 (126)
+|.+||++|++++++++++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999998774 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 80 S-NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
. +|.||+++|+++|+|+++|++||+ +|+++|.+...
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~--sI~sLL~~Pnp 118 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALI--SLQALLQSPEP 118 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHH--HHHHHHTSCCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHH--HHHHHHhCCCC
Confidence 8 999999999999999999999999 99999987543
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-40 Score=232.51 Aligned_cols=111 Identities=36% Similarity=0.746 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEe-ecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
|.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 689999999999 467899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
+|.||+++|.++|+|+++|++||+ +|+++|.....
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~--~i~~ll~~Pn~ 118 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIY--GLQYLFLEPNP 118 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCC
T ss_pred CCeEEcccchhhccCCCCHHHHHH--HHHHHHhCCCC
Confidence 999999999999999999999999 99999986543
No 35
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.2e-40 Score=229.51 Aligned_cols=117 Identities=28% Similarity=0.468 Sum_probs=106.9
Q ss_pred hHHHHHHHHHHhhcC-CCCCeEEeecC-C--CCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccc
Q 033144 2 ASKRILKELRDLQRD-PPTSCSAGPVA-E--DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (126)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~i~~~~~~-~--n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (126)
|.+||++|+++++++ +++|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 679999999999998 78899998854 3 5999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcE---EccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhhhh
Q 033144 78 INSNGNI---CLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLEKI 121 (126)
Q Consensus 78 V~~~G~i---cl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~~~ 121 (126)
|+.+|+| |+++|. +|+|+++|++||+ +|+++|.+...-..+
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~vL~--sI~~ll~~Pn~~~p~ 145 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIETILI--SLRQEMLSSANKRLP 145 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHHHHH--HHHHHTTSTTTTTCC
T ss_pred CccCCeEehhhccccc-CCCCcCcHHHHHH--HHHHHHhCCCCCCcC
Confidence 9999999 888886 5999999999999 999999876544433
No 36
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1e-39 Score=244.18 Aligned_cols=116 Identities=39% Similarity=0.777 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHhhcC---CCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccc
Q 033144 2 ASKRILKELRDLQRD---PPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNI 78 (126)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 78 (126)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 689999999999987 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhh
Q 033144 79 N-SNGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLE 119 (126)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~ 119 (126)
+ .+|.||+++|.++|+|+++|++||+ +|+++|.+.+.-.
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~--sI~~ll~~pnp~~ 177 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLL--SLQALLAAAEPDD 177 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHH--HHHHHHHSCCTTS
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHH--HHHHHhcCCCCCC
Confidence 9 5999999999999999999999999 9999999765433
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.7e-40 Score=234.39 Aligned_cols=112 Identities=35% Similarity=0.699 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEe-ecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
|.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 679999999999 577899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
+|.||+++|.++|+|+++|++||+ +|+++|.....-
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~--si~~ll~~Pn~~ 139 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIY--GLQYLFLEPNPE 139 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHH--HHHHHHHSCCTT
T ss_pred CCcEEcccccccCCCCCCHHHHHH--HHHHHHhCCCCC
Confidence 999999999999999999999999 999999865443
No 38
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.1e-39 Score=224.68 Aligned_cols=118 Identities=31% Similarity=0.585 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHhhcC-CCCCeEEeecC-C--CCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccc
Q 033144 2 ASKRILKELRDLQRD-PPTSCSAGPVA-E--DMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (126)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~i~~~~~~-~--n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (126)
+.+||++|+++++++ +++|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 568999999999998 78899998854 3 4899999999999999999999999999999999999999999999999
Q ss_pred ccCC-CcE--EccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhhhhh
Q 033144 78 INSN-GNI--CLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLEKIQ 122 (126)
Q Consensus 78 V~~~-G~i--cl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~~~~ 122 (126)
|+.+ |.| |+++|. +|+|+++|++||+ +|+++|.+...-..++
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~--~i~~ll~~pn~~~p~~ 131 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLL--DLRKEMATPANKKLRQ 131 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHH--HHHHHHTSHHHHTSCC
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHH--HHHHHHcCCCCCCCCC
Confidence 9986 999 899885 8999999999999 9999999866554444
No 39
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=3.8e-40 Score=230.71 Aligned_cols=114 Identities=36% Similarity=0.804 Sum_probs=105.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEee-cCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGP-VAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN 79 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 79 (126)
+|.+||++|+++|++++++|+.+.+ .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 3679999999999999999998554 6779999999997 9999999999999999999999999999999999999999
Q ss_pred CCCcEEccCCC-CCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 80 SNGNICLDILK-EQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
.+|.||+++|. ++|+|+++|++||+ +|+++|.....
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~--~i~~ll~~p~~ 117 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQ--SLIALVNDPQP 117 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHH--HHHHHHHSCCC
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHH--HHHHHHcCCCC
Confidence 99999999996 89999999999999 99999986543
No 40
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=232.13 Aligned_cols=112 Identities=30% Similarity=0.496 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHhhcCCCCC-eEEee-cCCC--CceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccc
Q 033144 2 ASKRILKELRDLQRDPPTS-CSAGP-VAED--MFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPN 77 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-i~~~~-~~~n--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (126)
+.+||++|++++++++++| +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 5799999999999998888 67776 4454 899999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEEccCCC--CCCCCcCcHHHHHhHHHHHHHHhhh
Q 033144 78 IN-SNGNICLDILK--EQWSPALTISKVTIFNNLQNYMKVL 115 (126)
Q Consensus 78 V~-~~G~icl~~l~--~~W~p~~~i~~il~~~~l~~~~~~~ 115 (126)
|+ .+|.||+++|. ++|+|+++|++||+ +|+++|.+.
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~--sI~~ll~~~ 154 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQ--ELRRLMMSK 154 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHH--HHHHHHHST
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHH--HHHHHHccC
Confidence 99 79999999998 89999999999999 999999853
No 41
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2e-39 Score=229.73 Aligned_cols=111 Identities=33% Similarity=0.678 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeec-CCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPV-AEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~-~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
+.+||++|+++|++++++|+++.+. ++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 5799999999999999999999855 57899999999 899999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCC------CCCCcCcHHHHHhHHHHHHHHhhh
Q 033144 81 NGNICLDILKE------QWSPALTISKVTIFNNLQNYMKVL 115 (126)
Q Consensus 81 ~G~icl~~l~~------~W~p~~~i~~il~~~~l~~~~~~~ 115 (126)
+|.||+++|.. +|+|+++|++||+ +|+++|...
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~--~i~~ll~~~ 132 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVW--GLNSLFTDL 132 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHH--HHHHTTTTT
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHH--HHHHHHcCC
Confidence 99999999975 7999999999999 999999873
No 42
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3.7e-39 Score=229.38 Aligned_cols=115 Identities=32% Similarity=0.662 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHhhc-C-C------CC---CeEEee-cCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEE
Q 033144 2 ASKRILKELRDLQR-D-P------PT---SCSAGP-VAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAF 69 (126)
Q Consensus 2 a~~RL~~E~~~l~~-~-~------~~---~i~~~~-~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f 69 (126)
|.+||++|+++|++ . + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 57999999999998 4 3 33 467778 77899999999999999999999999999999999999999999
Q ss_pred ec-cccccccc-CCCcEEccCCC-CCCCCcCcHHHHHhHHHHHHHHhhhhhh
Q 033144 70 KT-KVFHPNIN-SNGNICLDILK-EQWSPALTISKVTIFNNLQNYMKVLHTL 118 (126)
Q Consensus 70 ~t-~i~HPnV~-~~G~icl~~l~-~~W~p~~~i~~il~~~~l~~~~~~~~~~ 118 (126)
.| ++|||||+ .+|.||+++|. ++|+|+++|++||+ +|+++|.+...-
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~--si~~ll~~p~~~ 136 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVH--AVWRLLREPVCD 136 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHH--HHHHHHHSCCTT
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHH--HHHHHHhCCCCC
Confidence 99 99999996 79999999998 89999999999999 999999865443
No 43
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=3.9e-39 Score=254.50 Aligned_cols=118 Identities=69% Similarity=1.194 Sum_probs=112.7
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
+|.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLEK 120 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~~ 120 (126)
+|.||+++|+++|+|+++|++||+ +|+++|.....-.+
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~--~i~~ll~~pnp~~p 120 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLL--SICSLLCDPNPDDP 120 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHH--HHHHHHHSCCTTSC
T ss_pred CCeEeCcccccCCCccccHHHHHH--HHHHHHcCCCCCch
Confidence 999999999999999999999999 99999997654433
No 44
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=4.4e-40 Score=230.06 Aligned_cols=110 Identities=25% Similarity=0.605 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc-C
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN-S 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~-~ 80 (126)
|.+||++|++++++. |+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 568999999999873 788999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHH-HHHHHhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNN-LQNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~-l~~~~~~~~ 116 (126)
+|.||+++|+++|+|+++|++||+ + |+++|....
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~--~ii~~Ll~~Pn 114 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFE--VFLPQLLTYPN 114 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHH--THHHHHHHSCC
T ss_pred CCeEecccccccCCCCCCHHHHHH--HHHHHHHhCCC
Confidence 999999999999999999999998 8 689987544
No 45
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=231.03 Aligned_cols=110 Identities=26% Similarity=0.676 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC-
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS- 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~- 80 (126)
|.+||++|+++|++ +|+.+.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 57999999999985 57888887 67899999999999999999999999999999999999999999999999998
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHH-HHHHHhhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNN-LQNYMKVLHT 117 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~-l~~~~~~~~~ 117 (126)
+|.||+++|.++|+|+++|++||+ + |+++|.....
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~--s~I~~Ll~~Pn~ 137 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFE--SFLPQLLAYPNP 137 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHH--THHHHHHHSCCC
T ss_pred CCeEeccccccCCCCCCCHHHHHH--HHHHHHHhCCCC
Confidence 999999999999999999999999 9 9999986543
No 46
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-38 Score=227.68 Aligned_cols=112 Identities=28% Similarity=0.668 Sum_probs=100.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccC
Q 033144 1 MASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINS 80 (126)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 80 (126)
.|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 378999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred CCcEEccCC---CCCCCCcCcHHHHHhHHHHHHHHhhhh
Q 033144 81 NGNICLDIL---KEQWSPALTISKVTIFNNLQNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il~~~~l~~~~~~~~ 116 (126)
+|+||+++| .++|+|+++|++||+ +|+++|....
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~--si~sll~~p~ 128 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILT--GLLSFMVEKG 128 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHH--HHHHHHHSCC
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHH--HHHHHhcCCC
Confidence 999999999 689999999999999 9999998543
No 47
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2e-38 Score=228.78 Aligned_cols=115 Identities=31% Similarity=0.615 Sum_probs=106.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEe----ecCCCCc---eEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccc
Q 033144 2 ASKRILKELRDLQRDPPTSCSAG----PVAEDMF---HWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVF 74 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~----~~~~n~~---~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 74 (126)
|.+||++|+++|+ +++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 6899999999998 67899988 7889999 9999996 88899999999999999999999999999999999
Q ss_pred cccccCCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHhhhhhhhhh
Q 033144 75 HPNINSNGNICLDILKEQWSPALTISKVTIFNNLQNYMKVLHTLEKI 121 (126)
Q Consensus 75 HPnV~~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~~~~~~~ 121 (126)
||||+.+|.||+++|.++|+|+++|++||+ +|+++|.....-..+
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~--~i~~ll~~pn~~~pl 151 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIIT--GLLFLFLEPNPNDPL 151 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHH--HHHHHHHSCCTTSCS
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHH--HHHHHHhCCCCCcch
Confidence 999999999999999999999999999999 999999976544333
No 48
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=8.9e-39 Score=229.89 Aligned_cols=114 Identities=25% Similarity=0.548 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHhhcCC---CCCeEEeecCCCCceEEEEEECC-CCCCCCC-----------CEEEEEEeCCCCCCCCCCe
Q 033144 2 ASKRILKELRDLQRDP---PTSCSAGPVAEDMFHWQATIIGP-NDSPYAG-----------GVFVVTIHFPPDYPFKPPK 66 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~---~~~i~~~~~~~n~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~fp~~YP~~pP~ 66 (126)
|.+||++|+++|++++ +.++.+.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 6799999999999987 68899999999999999999997 9999998 8999999999999999999
Q ss_pred EEEecccccc-cccCCCcEEccCCC-CCCCCcCcHHHHHhHHHHHHHHhhhhh
Q 033144 67 VAFKTKVFHP-NINSNGNICLDILK-EQWSPALTISKVTIFNNLQNYMKVLHT 117 (126)
Q Consensus 67 v~f~t~i~HP-nV~~~G~icl~~l~-~~W~p~~~i~~il~~~~l~~~~~~~~~ 117 (126)
|+|.+++||| ||+.+|.||+++|. ++|+|+++|++||+ +|+++|...+.
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~--sI~slL~~p~a 158 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIM--QINATLVKGKA 158 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHH--HHHHHHHHTTC
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHH--HHHHHHcCCCh
Confidence 9999999999 69999999999997 79999999999999 99999987543
No 49
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.5e-38 Score=225.19 Aligned_cols=111 Identities=28% Similarity=0.608 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHhhcCC------------CCCeEEeecCCCCceEEEEEECCCCCCCC--CCEEEEEEeCCCCCCCCCCeE
Q 033144 2 ASKRILKELRDLQRDP------------PTSCSAGPVAEDMFHWQATIIGPNDSPYA--GGVFVVTIHFPPDYPFKPPKV 67 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~------------~~~i~~~~~~~n~~~w~~~i~gp~~tpy~--gg~f~~~i~fp~~YP~~pP~v 67 (126)
|.|||++|+++|++++ +.++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++||+|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 6799999999999876 67899999999999999999999999999 999999999999999999999
Q ss_pred EEecccccccccCCCcEEccCCCCCCCCcCcHHHHHhHHHHHHHHh
Q 033144 68 AFKTKVFHPNINSNGNICLDILKEQWSPALTISKVTIFNNLQNYMK 113 (126)
Q Consensus 68 ~f~t~i~HPnV~~~G~icl~~l~~~W~p~~~i~~il~~~~l~~~~~ 113 (126)
+|.|++|||||+.+|.||+++|.++|+|+++++++|+ ..|++++.
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll-~~l~~l~~ 133 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIK-LVLDRVFS 133 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHH-HHHHHHHT
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHH-HHHHHHHh
Confidence 9999999999999999999999999999999999764 14666655
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-38 Score=224.17 Aligned_cols=109 Identities=22% Similarity=0.635 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccccccccc-C
Q 033144 2 ASKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNIN-S 80 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~-~ 80 (126)
|.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999873 33 3578999999999999999999999999999999999999999999999999999 5
Q ss_pred CCcEEccCCCCCCCCcCcHHHHHhHHHH-HHHHhhhh
Q 033144 81 NGNICLDILKEQWSPALTISKVTIFNNL-QNYMKVLH 116 (126)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~~l-~~~~~~~~ 116 (126)
+|.||+++|.++|+|+++|++||+ +| +++|....
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~--sil~~ll~~Pn 123 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFD--VFLPQLLRYPN 123 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHH--THHHHHHHSCC
T ss_pred CCeEeccccccCCCCCCcHHHHHH--HHHHHHHhCCC
Confidence 999999999999999999999999 87 78887543
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=232.72 Aligned_cols=110 Identities=34% Similarity=0.657 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHhhcCCCCC----eEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc-----
Q 033144 2 ASKRILKELRDLQRDPPTS----CSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTK----- 72 (126)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~----i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~----- 72 (126)
+.+||++|+++|++++++| +.+.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 5799999999999987764 4567889999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCcEEccCCC-------CCCCCcC-cHHHHHhHHHHHHHHh
Q 033144 73 VFHPNINSNGNICLDILK-------EQWSPAL-TISKVTIFNNLQNYMK 113 (126)
Q Consensus 73 i~HPnV~~~G~icl~~l~-------~~W~p~~-~i~~il~~~~l~~~~~ 113 (126)
+|||||+.+|+||+++|. ++|+|++ +|++||+ +||++|.
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLl--sIqsLL~ 203 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLV--SVQSLIL 203 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHH--HHHHHTS
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHH--HHHHHHc
Confidence 999999999999999997 6999999 8999999 9999995
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.97 E-value=9.4e-32 Score=188.28 Aligned_cols=105 Identities=19% Similarity=0.331 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCC----------EEEEEEeCCCCCCCCCCeEEEecc
Q 033144 3 SKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGG----------VFVVTIHFPPDYPFKPPKVAFKTK 72 (126)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~t~ 72 (126)
.+||++|+++|++ ++.+.++|++.|.+.+.||+||+|+|| .|++++.||++||++||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999998 467788899999999999999999999 999999999999999999999998
Q ss_pred -cccccccCCCcEEccCC-CC---CCCCcCcHHHHHhHHHHHHHHhh
Q 033144 73 -VFHPNINSNGNICLDIL-KE---QWSPALTISKVTIFNNLQNYMKV 114 (126)
Q Consensus 73 -i~HPnV~~~G~icl~~l-~~---~W~p~~~i~~il~~~~l~~~~~~ 114 (126)
++|||||.+|+||||+| +. +|+|+++|.++|.| +|-.+|++
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~l-gl~pwla~ 153 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMAL-GLGPWLAV 153 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHH-THHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHhh-ccCchhhh
Confidence 99999999999999999 43 45599999999976 88888873
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.83 E-value=2.4e-21 Score=133.19 Aligned_cols=105 Identities=21% Similarity=0.366 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCC----------EEEEEEeCCCCCCCCCCeEEEecc
Q 033144 3 SKRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGG----------VFVVTIHFPPDYPFKPPKVAFKTK 72 (126)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~t~ 72 (126)
.+||.+||+.|-+ +++...++-.+|...+.|++||+|+|+ .|++++.||.+||..||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999876 455556666799999999999999999 899999999999999999999995
Q ss_pred -cccccccCCCcEEccCCC-C---CCCCcCcHHHHHhHHHHHHHHhh
Q 033144 73 -VFHPNINSNGNICLDILK-E---QWSPALTISKVTIFNNLQNYMKV 114 (126)
Q Consensus 73 -i~HPnV~~~G~icl~~l~-~---~W~p~~~i~~il~~~~l~~~~~~ 114 (126)
.+|||+|.+|+|||+++. . +=.|.++|...+.| +|--+|++
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahalal-gl~pwla~ 155 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVLAL-GLGPWLSI 155 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHHHH-THHHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHHHh-ccchHHhh
Confidence 899999999999999871 1 12456688888764 88888774
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.80 E-value=1.5e-19 Score=126.96 Aligned_cols=109 Identities=22% Similarity=0.339 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhcCCC---CCeEEeecCCCCceEEEEEECCCCCCCCCCE---EEEEEeCCCCCCCCCCeEEEecc-----
Q 033144 4 KRILKELRDLQRDPP---TSCSAGPVAEDMFHWQATIIGPNDSPYAGGV---FVVTIHFPPDYPFKPPKVAFKTK----- 72 (126)
Q Consensus 4 ~RL~~E~~~l~~~~~---~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t~----- 72 (126)
+|..+|..++.+.-+ +...+...++...++-+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 567788877655422 2233444555555666666666668999998 88999999999999999988651
Q ss_pred -----cc-cccccCCCcEEccCCCCCCCC-cCcHHHHHhHHHHHHHHhhh
Q 033144 73 -----VF-HPNINSNGNICLDILKEQWSP-ALTISKVTIFNNLQNYMKVL 115 (126)
Q Consensus 73 -----i~-HPnV~~~G~icl~~l~~~W~p-~~~i~~il~~~~l~~~~~~~ 115 (126)
|+ |||||.+|+||+++| ++|+| +.++.++|. +|++++...
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~--~l~~lf~ep 157 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQ--ELMSLLHEP 157 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHH--HHHHTTSCC
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHH--HHHHHhcCC
Confidence 77 999999999999999 56999 689999999 899887654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.59 E-value=2.5e-15 Score=103.79 Aligned_cols=102 Identities=18% Similarity=0.322 Sum_probs=77.1
Q ss_pred HHHHHHHHhhcCCCC---CeEEe-ecCCCCceEEEEEECCCCCCCCCCEEEE--EEeCCCCCCCCCCeEEEecc------
Q 033144 5 RILKELRDLQRDPPT---SCSAG-PVAEDMFHWQATIIGPNDSPYAGGVFVV--TIHFPPDYPFKPPKVAFKTK------ 72 (126)
Q Consensus 5 RL~~E~~~l~~~~~~---~i~~~-~~~~n~~~w~~~i~gp~~tpy~gg~f~~--~i~fp~~YP~~pP~v~f~t~------ 72 (126)
+..+|...+.+.-+. ..... -...+++.|.++|. .+|+|+.|.+ .|-||++||++||.| |+++
T Consensus 24 ~t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 24 LTVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hhHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 345666665544221 11111 22358999999997 6799999985 888999999999999 6655
Q ss_pred cccccccCCCcEEccCCCCCCCC-cCcHHHHHhHHHHHHHHhh
Q 033144 73 VFHPNINSNGNICLDILKEQWSP-ALTISKVTIFNNLQNYMKV 114 (126)
Q Consensus 73 i~HPnV~~~G~icl~~l~~~W~p-~~~i~~il~~~~l~~~~~~ 114 (126)
..|||||.+|+||++.|.+ |++ ..++.+++. .|++.+..
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~--~l~~~F~~ 138 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQ--VMIVVFGD 138 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHH--HHHHHHHH
T ss_pred CCCCCCCCCCCEecccccc-cCCCCCCHHHHHH--HHHHHHhh
Confidence 4899999999999999955 988 889999888 77776653
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.97 E-value=0.005 Score=40.45 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033144 4 KRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKT 71 (126)
Q Consensus 4 ~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 71 (126)
.+...|+..|+.--+..+.+. ......+.+.+....+..-+.-.+.+.+.||++||.+||.+.+.+
T Consensus 13 e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456778888876655555432 222355666665322222233478999999999999999998765
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.76 E-value=0.027 Score=39.90 Aligned_cols=86 Identities=15% Similarity=0.271 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhcCCCCCeEEeecCCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecccccccccCCCc
Q 033144 4 KRILKELRDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGN 83 (126)
Q Consensus 4 ~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~G~ 83 (126)
.+|.+|+.++-=+ .+.-.+.++....+++.... |..+.+++.++.+||.++|.+...-|. |.
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------ 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF------ 65 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------
Confidence 4688888887211 23334678889999987433 678999999999999999987655443 11
Q ss_pred EEccCCCCCCCCcCcHHHHHhHHHHHHHHhhh
Q 033144 84 ICLDILKEQWSPALTISKVTIFNNLQNYMKVL 115 (126)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~~~l~~~~~~~ 115 (126)
.-.|+|..++.+++. +.+..+...
T Consensus 66 ------~~~w~~~ssL~~v~~--qF~~~Le~l 89 (186)
T 3zqs_A 66 ------CASWTPQSSLISIYS--QFLAAIESL 89 (186)
T ss_dssp ------CCCCCTTCCHHHHHH--HHHHHHHHT
T ss_pred ------ccccCCCccHHHHHH--HHHHHHHHH
Confidence 146999999999887 555554443
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.67 E-value=0.015 Score=38.14 Aligned_cols=67 Identities=12% Similarity=0.167 Sum_probs=41.2
Q ss_pred HHHHHHHHhhcCCCCCeEEeecCC--CCceEEEEEECCCCCCC--CCCEEEEEEeCCCCCCCCCCeEEEec
Q 033144 5 RILKELRDLQRDPPTSCSAGPVAE--DMFHWQATIIGPNDSPY--AGGVFVVTIHFPPDYPFKPPKVAFKT 71 (126)
Q Consensus 5 RL~~E~~~l~~~~~~~i~~~~~~~--n~~~w~~~i~gp~~tpy--~gg~f~~~i~fp~~YP~~pP~v~f~t 71 (126)
+...|+..|+.--+..+.+..... +...+.+.+..+.+..- ..-.+.+.+.+|++||..+|.+...+
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 467788888776555554432211 23344444432222111 12468899999999999999998876
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.028 Score=37.25 Aligned_cols=67 Identities=13% Similarity=0.227 Sum_probs=42.3
Q ss_pred HHHHHHHHhhcCCCCCeEEeecC------CCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc
Q 033144 5 RILKELRDLQRDPPTSCSAGPVA------EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTK 72 (126)
Q Consensus 5 RL~~E~~~l~~~~~~~i~~~~~~------~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 72 (126)
+-..|+..|+.--+..+.+.-.. .....+.+.+....+ .-..-.+.+.+.+|++||.+||.|.+.+.
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 45667888876554444322110 124567777763222 11234788999999999999999998653
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.26 E-value=0.13 Score=33.87 Aligned_cols=67 Identities=16% Similarity=0.185 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhcCCCCCeEEeecCC-----CCceEEEEEECCCC-C-CCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033144 4 KRILKELRDLQRDPPTSCSAGPVAE-----DMFHWQATIIGPND-S-PYAGGVFVVTIHFPPDYPFKPPKVAFKT 71 (126)
Q Consensus 4 ~RL~~E~~~l~~~~~~~i~~~~~~~-----n~~~w~~~i~gp~~-t-py~gg~f~~~i~fp~~YP~~pP~v~f~t 71 (126)
.+...|+..|+.--+..+....... ......+.+. +.+ . .-..-.+.+.+.||++||.++|.|.+..
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 4556788888765555544321111 1345556664 221 1 0012468999999999999999998743
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.50 E-value=0.1 Score=34.09 Aligned_cols=65 Identities=15% Similarity=0.092 Sum_probs=39.3
Q ss_pred HHHHHHHHhhcCCCC--CeEEeec-CCCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEe
Q 033144 5 RILKELRDLQRDPPT--SCSAGPV-AEDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFK 70 (126)
Q Consensus 5 RL~~E~~~l~~~~~~--~i~~~~~-~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 70 (126)
+...|+..|+.--+. .+.+... ..+...+.+.+... +..=..-.+.+.+.+|++||..+|.+...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~-~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAE-GFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECC-TTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCC-CCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 345677777654322 3332211 12345777777632 21111247899999999999999998755
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.76 E-value=0.12 Score=34.78 Aligned_cols=24 Identities=21% Similarity=0.517 Sum_probs=21.2
Q ss_pred EEEEEEeCCCCCCCCCCeEEEecc
Q 033144 49 VFVVTIHFPPDYPFKPPKVAFKTK 72 (126)
Q Consensus 49 ~f~~~i~fp~~YP~~pP~v~f~t~ 72 (126)
.+.+.+.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999987654
No 63
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.74 E-value=0.17 Score=34.31 Aligned_cols=24 Identities=13% Similarity=0.364 Sum_probs=21.6
Q ss_pred EEEEEEeCCCCCCCCCCeEEEecc
Q 033144 49 VFVVTIHFPPDYPFKPPKVAFKTK 72 (126)
Q Consensus 49 ~f~~~i~fp~~YP~~pP~v~f~t~ 72 (126)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987653
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=74.42 E-value=2.5 Score=19.52 Aligned_cols=19 Identities=37% Similarity=0.695 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhcCCCCCe
Q 033144 3 SKRILKELRDLQRDPPTSC 21 (126)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i 21 (126)
+.||.-|+..++.+++.|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 5799999999999988774
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=49.33 E-value=17 Score=25.74 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=22.1
Q ss_pred CCCEEEEEEeCCCCCCC-----CCCeEEEe
Q 033144 46 AGGVFVVTIHFPPDYPF-----KPPKVAFK 70 (126)
Q Consensus 46 ~gg~f~~~i~fp~~YP~-----~pP~v~f~ 70 (126)
+.|.|.|+-.+|--||. .||.|+|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46889999999999998 89999885
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=38.60 E-value=95 Score=21.37 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=31.4
Q ss_pred CCCceEEEEEECCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc
Q 033144 28 EDMFHWQATIIGPNDSPYAGGVFVVTIHFPPDYPFKPPKVAFKTK 72 (126)
Q Consensus 28 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 72 (126)
+.-.+|.|.+.|+.+.-...-.=++.+.+.+.||. |.-.+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 35679999999987655555567788889999974 55555544
No 67
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=32.11 E-value=28 Score=25.25 Aligned_cols=25 Identities=28% Similarity=0.704 Sum_probs=21.7
Q ss_pred CCCEEEEEEeCCCCCC-------CCCCeEEEe
Q 033144 46 AGGVFVVTIHFPPDYP-------FKPPKVAFK 70 (126)
Q Consensus 46 ~gg~f~~~i~fp~~YP-------~~pP~v~f~ 70 (126)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 4588999999999998 479999885
No 68
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=31.07 E-value=1.2e+02 Score=20.14 Aligned_cols=43 Identities=16% Similarity=0.362 Sum_probs=31.8
Q ss_pred CceEE--EEEECCCCCCCC-CCEEEEEEeCCCCCCCCCCeEEEecccc
Q 033144 30 MFHWQ--ATIIGPNDSPYA-GGVFVVTIHFPPDYPFKPPKVAFKTKVF 74 (126)
Q Consensus 30 ~~~w~--~~i~gp~~tpy~-gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 74 (126)
+.+|. +.+.|+.+.... .-.=++.+.+.+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 46998 788898887654 456678888889887 47777766543
No 69
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=30.87 E-value=30 Score=25.06 Aligned_cols=25 Identities=20% Similarity=0.493 Sum_probs=22.0
Q ss_pred CCCEEEEEEeCCCCCCC-------CCCeEEEe
Q 033144 46 AGGVFVVTIHFPPDYPF-------KPPKVAFK 70 (126)
Q Consensus 46 ~gg~f~~~i~fp~~YP~-------~pP~v~f~ 70 (126)
+.|.|.|+=.+|--||. .||.|.|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 35889999999999996 79999886
No 70
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=30.36 E-value=29 Score=26.12 Aligned_cols=25 Identities=24% Similarity=0.509 Sum_probs=21.1
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033144 46 AGGVFVVTIHFPPDYP------------------FKPPKVAFK 70 (126)
Q Consensus 46 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 70 (126)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 3588999999999998 568998875
No 71
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=29.63 E-value=31 Score=26.01 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=20.8
Q ss_pred CCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033144 47 GGVFVVTIHFPPDYP------------------FKPPKVAFK 70 (126)
Q Consensus 47 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 70 (126)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 488999999999998 469999985
No 72
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=29.63 E-value=36 Score=23.89 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=20.8
Q ss_pred CEEEEEEeCCCCCCCC-----CCeEEEe
Q 033144 48 GVFVVTIHFPPDYPFK-----PPKVAFK 70 (126)
Q Consensus 48 g~f~~~i~fp~~YP~~-----pP~v~f~ 70 (126)
|.|.|+=.+|--||.. ||.|.|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8899999999999987 8888875
No 73
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=29.46 E-value=31 Score=25.73 Aligned_cols=25 Identities=20% Similarity=0.466 Sum_probs=21.3
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033144 46 AGGVFVVTIHFPPDYP------------------FKPPKVAFK 70 (126)
Q Consensus 46 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 70 (126)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4688999999999998 459999885
No 74
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=29.21 E-value=31 Score=22.79 Aligned_cols=30 Identities=27% Similarity=0.530 Sum_probs=23.7
Q ss_pred CCCeEEEe---cccccccccCCCcEEccCCCCC
Q 033144 63 KPPKVAFK---TKVFHPNINSNGNICLDILKEQ 92 (126)
Q Consensus 63 ~pP~v~f~---t~i~HPnV~~~G~icl~~l~~~ 92 (126)
+||.|-+. +.--|++|..+|..|+++|.++
T Consensus 43 ~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 75 (157)
T 3pft_A 43 EPPLVAFAVQNSSTTWPKLKDLPSLGISVLGEA 75 (157)
T ss_dssp TTTEEEEEEETTCSSHHHHTTSSCEEEEECBTT
T ss_pred CCcEEEEEECCCCchHHHHHhCCEEEEEECCHH
Confidence 68887774 3456899999999999999643
No 75
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=28.86 E-value=37 Score=17.59 Aligned_cols=13 Identities=31% Similarity=0.613 Sum_probs=10.4
Q ss_pred HHHHHHHHHHhhc
Q 033144 3 SKRILKELRDLQR 15 (126)
Q Consensus 3 ~~RL~~E~~~l~~ 15 (126)
.+|+.+|++++.+
T Consensus 30 ~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 30 IKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 5899999998753
No 76
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=28.60 E-value=33 Score=25.56 Aligned_cols=24 Identities=29% Similarity=0.735 Sum_probs=20.9
Q ss_pred CCEEEEEEeCCCCCCC------------------CCCeEEEe
Q 033144 47 GGVFVVTIHFPPDYPF------------------KPPKVAFK 70 (126)
Q Consensus 47 gg~f~~~i~fp~~YP~------------------~pP~v~f~ 70 (126)
.|.|.|+=.+|--||. .||.|.|.
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 5889999999999994 68999885
No 77
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=27.62 E-value=36 Score=24.84 Aligned_cols=24 Identities=21% Similarity=0.594 Sum_probs=20.3
Q ss_pred CCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033144 47 GGVFVVTIHFPPDYP------------------FKPPKVAFK 70 (126)
Q Consensus 47 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 70 (126)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 488999999999887 478999885
No 78
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=26.82 E-value=37 Score=25.54 Aligned_cols=24 Identities=21% Similarity=0.520 Sum_probs=20.8
Q ss_pred CCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033144 47 GGVFVVTIHFPPDYP------------------FKPPKVAFK 70 (126)
Q Consensus 47 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 70 (126)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 488999999999997 469999885
No 79
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=25.92 E-value=36 Score=25.24 Aligned_cols=24 Identities=21% Similarity=0.524 Sum_probs=20.2
Q ss_pred CCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033144 47 GGVFVVTIHFPPDYP------------------FKPPKVAFK 70 (126)
Q Consensus 47 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 70 (126)
.|.|.|+=.+|--|| ..||.|.|.
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 488999999998887 468988885
No 80
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=25.41 E-value=62 Score=23.66 Aligned_cols=24 Identities=33% Similarity=0.708 Sum_probs=19.4
Q ss_pred CCEEEEEEeCCCCC------------------CCCCCeEEEe
Q 033144 47 GGVFVVTIHFPPDY------------------PFKPPKVAFK 70 (126)
Q Consensus 47 gg~f~~~i~fp~~Y------------------P~~pP~v~f~ 70 (126)
.|.|.|+=.+|--| |..||.|+|.
T Consensus 151 ~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 151 QGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 47899999999666 5578888885
No 81
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=22.51 E-value=1.4e+02 Score=18.27 Aligned_cols=24 Identities=25% Similarity=0.366 Sum_probs=19.2
Q ss_pred CCEEEEEEeCCCCCCCCCCeEEEec
Q 033144 47 GGVFVVTIHFPPDYPFKPPKVAFKT 71 (126)
Q Consensus 47 gg~f~~~i~fp~~YP~~pP~v~f~t 71 (126)
+..+...+.|+..|+. +|+|.+.-
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~l 51 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLSI 51 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEEe
Confidence 3468888999999995 99998753
No 82
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=20.70 E-value=19 Score=16.48 Aligned_cols=8 Identities=38% Similarity=1.107 Sum_probs=3.9
Q ss_pred Eecccccc
Q 033144 69 FKTKVFHP 76 (126)
Q Consensus 69 f~t~i~HP 76 (126)
|..+.|||
T Consensus 12 fserpyhp 19 (26)
T 2jrw_A 12 FSERPYHP 19 (26)
T ss_dssp CCSSSCCS
T ss_pred cccCCCCC
Confidence 44444555
No 83
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=20.68 E-value=27 Score=22.81 Aligned_cols=31 Identities=26% Similarity=0.559 Sum_probs=24.2
Q ss_pred CCCCeEEEe---cccccccccCCCcEEccCCCCC
Q 033144 62 FKPPKVAFK---TKVFHPNINSNGNICLDILKEQ 92 (126)
Q Consensus 62 ~~pP~v~f~---t~i~HPnV~~~G~icl~~l~~~ 92 (126)
.+||.|-+. +.--|++|..+|..|+++|.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 368888775 3456899999999999999654
No 84
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=20.56 E-value=67 Score=14.59 Aligned_cols=11 Identities=45% Similarity=0.610 Sum_probs=7.7
Q ss_pred HHHHHHHHHHh
Q 033144 3 SKRILKELRDL 13 (126)
Q Consensus 3 ~~RL~~E~~~l 13 (126)
.++|.+|+++-
T Consensus 10 qkkirkelkqr 20 (26)
T 1m46_B 10 QKKIRKELKQR 20 (26)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 46788888763
No 85
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=20.53 E-value=97 Score=17.91 Aligned_cols=26 Identities=8% Similarity=0.041 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhcCCCCCeEEeecCC
Q 033144 3 SKRILKELRDLQRDPPTSCSAGPVAE 28 (126)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~~~~~ 28 (126)
..|+.+|++++++....-+++.|...
T Consensus 33 y~rms~emQrI~r~GGkIvSItp~~~ 58 (67)
T 1b33_N 33 YENWFREQQRIQKMGGKIVKVELATG 58 (67)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred HHHHhHHHHHHHHcCCeEEEEEECCC
Confidence 46899999999998776677777654
Done!