Query 033147
Match_columns 126
No_of_seqs 103 out of 274
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 17:04:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033147.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033147hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i51_A Uncharacterized conserv 99.9 1.8E-23 6.1E-28 154.5 16.8 119 2-124 74-195 (195)
2 2ou5_A Pyridoxamine 5'-phospha 99.8 5.8E-20 2E-24 133.6 12.8 97 2-124 78-175 (175)
3 1dnl_A Pyridoxine 5'-phosphate 99.7 1.2E-16 4.2E-21 118.1 8.7 110 2-124 79-199 (199)
4 1ci0_A Protein (PNP oxidase); 99.6 1.5E-15 5.1E-20 114.7 8.1 112 2-124 105-228 (228)
5 1nrg_A Pyridoxine 5'-phosphate 99.6 2.6E-15 9E-20 115.4 9.1 115 2-124 126-261 (261)
6 1ty9_A Phenazine biosynthesis 99.5 4.8E-15 1.7E-19 111.5 4.5 109 2-124 104-222 (222)
7 2a2j_A Pyridoxamine 5'-phospha 99.4 1.9E-13 6.4E-18 104.3 8.0 106 2-125 127-245 (246)
8 2ig6_A NIMC/NIMA family protei 98.1 4.1E-05 1.4E-09 53.3 9.8 69 2-101 77-145 (150)
9 2qea_A Putative general stress 98.0 9.6E-05 3.3E-09 51.8 10.5 74 3-106 65-139 (160)
10 3dmb_A Putative general stress 97.9 5E-05 1.7E-09 52.6 8.5 68 2-99 68-135 (147)
11 2hhz_A Pyridoxamine 5'-phospha 97.9 9.1E-05 3.1E-09 51.0 9.5 76 2-107 62-139 (150)
12 2re7_A Uncharacterized protein 97.8 7.2E-05 2.5E-09 50.3 7.5 65 2-96 68-132 (134)
13 3u35_A General stress protein; 97.7 0.00024 8.3E-09 51.3 8.6 75 2-106 87-163 (182)
14 2i02_A General stress protein 97.6 0.00037 1.3E-08 47.5 8.7 67 2-98 72-138 (148)
15 2hq7_A Protein, related to gen 97.2 0.0018 6.2E-08 43.7 8.2 68 2-99 67-134 (146)
16 3ec6_A General stress protein 97.0 0.006 2E-07 41.1 9.1 66 3-99 62-130 (139)
17 3db0_A LIN2891 protein; putati 96.4 0.008 2.7E-07 39.7 5.9 63 3-96 64-127 (128)
18 2fhq_A Putative general stress 96.3 0.022 7.6E-07 37.9 7.8 64 2-97 69-132 (141)
19 2iab_A Hypothetical protein; N 95.4 0.029 1E-06 38.6 5.4 73 3-106 73-147 (155)
20 3ba3_A Protein LP_0091, pyrido 94.4 0.07 2.4E-06 37.1 5.2 67 2-96 63-133 (145)
21 2htd_A Predicted flavin-nucleo 93.8 0.12 3.9E-06 35.1 5.1 27 2-28 87-113 (140)
22 1vl7_A Hypothetical protein AL 93.6 0.15 5.3E-06 34.8 5.6 69 2-96 78-153 (157)
23 1rfe_A Hypothetical protein RV 92.0 0.99 3.4E-05 30.4 8.0 75 3-98 70-147 (162)
24 3f7e_A Pyridoxamine 5'-phospha 91.0 1.2 3.9E-05 29.1 7.2 28 2-29 62-90 (131)
25 2asf_A Hypothetical protein RV 86.0 3.6 0.00012 26.9 7.1 24 3-28 71-94 (137)
26 2q9k_A Uncharacterized protein 68.5 7.4 0.00025 26.4 4.4 25 2-28 71-95 (151)
27 2aq6_A Pyridoxine 5'-phosphate 66.1 16 0.00056 23.6 5.7 26 3-28 67-92 (147)
28 3cp3_A Uncharacterized protein 48.8 40 0.0014 22.0 5.4 49 14-96 90-138 (148)
29 3a6r_A FMN-binding protein; el 48.4 20 0.00067 23.8 3.6 26 3-28 64-95 (122)
30 2hti_A BH0577 protein; structu 32.5 1.2E+02 0.004 20.6 6.4 21 78-98 145-165 (185)
No 1
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=99.91 E-value=1.8e-23 Score=154.49 Aligned_cols=119 Identities=34% Similarity=0.585 Sum_probs=101.4
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC-CCCCCCCCCCCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK-EFSLDPCAGPVD 80 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~-~~~~d~~~~~~~ 80 (126)
.|++|||+++...|+||+|+|.+++++..+.+|+.+|.++|++.+..+|.+|.||.||+++...... ........+.++
T Consensus 74 ~v~l~f~~~~~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg~~~~~~~~~~~~~~~~~~p~p~ 153 (195)
T 2i51_A 74 WAEICWYFPNTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESGAFEPSPPDPIEPVP 153 (195)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTTSBCCCCGGGGCCCCCCSSSCCT
T ss_pred eEEEEEEeCCCCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCCCCccchhHHhhhhccCCCCCCC
Confidence 4899999999999999999999999998888999999999999999999999999999999643311 101112346789
Q ss_pred cEEEEEEeccEEEeEEec--CCceEEEEeecCCCCCCCeEEEEccC
Q 033147 81 AFCVLILDPDQVDYLNLK--SNQKLKFMSRLSDNGEKYWASLKTSP 124 (126)
Q Consensus 81 nF~vl~~~p~~VD~L~L~--~h~R~~f~~~~~~~~~~~W~~~~l~P 124 (126)
||++++|.|++||+++++ .|+|.+|++..+ ++|..++|+|
T Consensus 154 ~w~~~~v~P~~iefwq~~~~rh~R~~y~~~~~----~~W~~~rl~P 195 (195)
T 2i51_A 154 NFCLLLLDPVQVDHLELRGEPQNRWLYHRNDQ----QEWSSEAINP 195 (195)
T ss_dssp TEEEEEEEEEEEEEEESSSSSCEEEEEEECTT----SCEEEEEBCC
T ss_pred ceEEEEEEccEEEEEecCCCCceEEEEEECCC----CCEEEEEeCC
Confidence 999999999999999998 589999998433 4799999998
No 2
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=99.83 E-value=5.8e-20 Score=133.64 Aligned_cols=97 Identities=21% Similarity=0.339 Sum_probs=87.0
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|++|||+++...|+||+|+|++++++ .++|+.+++.+|..|.++.||+++.+ . + .+.++|
T Consensus 78 ~v~l~f~~~~~~~qvri~G~a~~~~d~----------~~~w~~~~~~~~~~~~~~~~~~~~~~--~--l-----~~~p~~ 138 (175)
T 2ou5_A 78 RVAIHIWIPKASLQVRAKAIAKILPGD----------PNLFAQLPEAARMNYQGPVPGTPLPA--E--P-----DATPNR 138 (175)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEEEECC----------HHHHHHSCHHHHGGGSSSCTTCBSSC--C--C-----CCCSCC
T ss_pred cEEEEEEeCCCCEEEEEEEEEEEeCcH----------HHHHHHCCHhHHhcccCCCCCCcccc--c--c-----CCCCCc
Confidence 489999999999999999999999988 57999999999999988999999966 1 1 357899
Q ss_pred EEEEEEeccEEEeEEec-CCceEEEEeecCCCCCCCeEEEEccC
Q 033147 82 FCVLILDPDQVDYLNLK-SNQKLKFMSRLSDNGEKYWASLKTSP 124 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L~-~h~R~~f~~~~~~~~~~~W~~~~l~P 124 (126)
|+|+.|.|++|||++++ +|+|++|++. + |..++|+|
T Consensus 139 ~~~~~v~p~~vefw~~~~~h~R~~y~~~------~-W~~~~l~P 175 (175)
T 2ou5_A 139 FTRLICHLSEIDVLHLTTPHQRAVYTAP------D-WRGIWVSP 175 (175)
T ss_dssp EEEEEEEEEEEEEEECCSSCEEEEEETT------T-CCCEEECC
T ss_pred EEEEEEEeeEEEEEeCCCCceEEEEEcC------C-ceEEEecC
Confidence 99999999999999998 5899999872 3 99999998
No 3
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=99.68 E-value=1.2e-16 Score=118.11 Aligned_cols=110 Identities=6% Similarity=0.049 Sum_probs=86.0
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC--------CCCCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK--------EFSLD 73 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~--------~~~~d 73 (126)
.|++|||+++...|+||+|+|++++++. ..++|++.+..+|..+-..++|+++.+.... ..-.+
T Consensus 79 ~v~l~f~~~~~~~qvri~G~a~~v~d~~--------~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~ 150 (199)
T 1dnl_A 79 RVSLLFPWHTLERQVMVIGKAERLSTLE--------VMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQ 150 (199)
T ss_dssp EEEEEECCGGGTEEEEEEEEEEECCHHH--------HHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTT
T ss_pred eEEEEEEcCCCCEEEEEEEEEEEeCCcc--------HHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccC
Confidence 4899999999999999999999998752 3689999987777765445788888764210 00011
Q ss_pred CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147 74 PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP 124 (126)
Q Consensus 74 ~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P 124 (126)
...+.++||+++.|.|++|||++++ .|+|.+|++. +++|..++|+|
T Consensus 151 ~~~p~p~~~~~~~v~p~~vefw~~~~~rlh~R~~y~~~-----~~~W~~~~l~P 199 (199)
T 1dnl_A 151 GEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRE-----NDAWKIDRLAP 199 (199)
T ss_dssp SSCCCCTTEEEEEECCSEEEEEECCGGGCCEEEEEEEC-----SSSEEEEECCC
T ss_pred CCCCCCCceEEEEEECCEEEEEecCCCCCceEEEEEEC-----CCCEEEEEecC
Confidence 1235679999999999999999997 4999999983 24699999998
No 4
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=99.61 E-value=1.5e-15 Score=114.74 Aligned_cols=112 Identities=13% Similarity=0.213 Sum_probs=87.8
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCC--------CCCCCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP--------KEFSLD 73 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~--------~~~~~d 73 (126)
.|++|||+++...|+||+|+|.+++++ ...++|++.+..+|..+-..++|+++.+... ...-.+
T Consensus 105 ~val~f~~~~~~rqVrI~G~ae~v~~~--------~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~ 176 (228)
T 1ci0_A 105 NAAIVFFWKDLQRQVRVEGITEHVNRE--------TSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKD 176 (228)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEECCHH--------HHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTS
T ss_pred eEEEEEEeCCCCEEEEEEEEEEEcCch--------hhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcC
Confidence 489999999999999999999999865 3367999999999997655678999876210 000011
Q ss_pred CC-CCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147 74 PC-AGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP 124 (126)
Q Consensus 74 ~~-~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P 124 (126)
.. .+.++||+++.|.|++|||++++ -|.|.+|++... +++|..++|+|
T Consensus 177 ~~~~p~p~~w~g~rv~P~~iEfWq~~~~rlHdR~~y~r~~~---~~~W~~~rL~P 228 (228)
T 1ci0_A 177 AEDIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKTE---NDPWKVVRLAP 228 (228)
T ss_dssp CSSCCCCTTEEEEEEEEEEEEEEECCTTSCCEEEEEECSST---TSCCEEEEECC
T ss_pred CCCCCCCCcEEEEEEEccEEEEeeCCCCCcEEEEEEEecCC---CCCeEEEEecC
Confidence 12 45789999999999999999997 299999998420 24799999998
No 5
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=99.60 E-value=2.6e-15 Score=115.42 Aligned_cols=115 Identities=14% Similarity=0.254 Sum_probs=85.8
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC--------CCCCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK--------EFSLD 73 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~--------~~~~d 73 (126)
.|++|||+++...|+||+|+|.+++++. ..++|+..+..+|..+-...+|+++.+.... ..-.+
T Consensus 126 ~vaL~f~~~~~~rqVrI~G~ae~v~d~e--------~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~ 197 (261)
T 1nrg_A 126 FASLVFYWEPLNRQVRVEGPVKKLPEEE--------AECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQD 197 (261)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCHHH--------HHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEEeCCCCEEEEEEEEEEEecCcc--------hHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhccc
Confidence 4899999999999999999999998763 3578988777777655334788888652210 00011
Q ss_pred CCCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecC------C----CCCCCeEEEEccC
Q 033147 74 PCAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLS------D----NGEKYWASLKTSP 124 (126)
Q Consensus 74 ~~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~------~----~~~~~W~~~~l~P 124 (126)
...+.++||+++.|.|++|||++++ .|+|.+|++... + .++++|..++|+|
T Consensus 198 ~~vp~p~~w~g~rv~P~~vEfwq~~~~rlHdR~~y~r~~~~~~~~~~~~~~~~~~~W~~~rL~P 261 (261)
T 1nrg_A 198 QEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP 261 (261)
T ss_dssp SCCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred CCCCCCCcEEEEEEEccEEEEEECCCCCCeEEEEEEECCccccccccccccCCCCCeEEEEccC
Confidence 1235678999999999999999998 399999998430 0 0135799999998
No 6
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=99.53 E-value=4.8e-15 Score=111.46 Aligned_cols=109 Identities=12% Similarity=0.228 Sum_probs=74.5
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHh-------ccCCCCCCCcCCCCCCCCCCCCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARL-------QYLDPEQGCPSVNEQPKEFSLDP 74 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~-------~y~~p~PG~~~~~~~~~~~~~d~ 74 (126)
.|++|||+++...|+||+|+|.+++++. ..++|+..+..+|. +...+.||.......... ..+.
T Consensus 104 ~val~f~~~~~~rqvrI~G~ae~v~~~~--------~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~-~~~~ 174 (222)
T 1ty9_A 104 WASGVLYWRETSQQIILNGQAVRLPNAK--------ADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLA-ELQG 174 (222)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEECCHHH--------HHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHH-TSCS
T ss_pred eEEEEEEcCCCCeEEEEEEEEEEEccHH--------hHHHHHhCccccccceeeccCCCcCCChHHHHHHHHHHh-hccC
Confidence 4899999999999999999999998542 24577765544432 222222222211000000 0011
Q ss_pred CCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccC
Q 033147 75 CAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP 124 (126)
Q Consensus 75 ~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P 124 (126)
..+.++||+++.|.|++|||+++. .|+|.+|++.. ++|..++|+|
T Consensus 175 ~~p~p~~w~~~rv~P~~vEfwq~~~~rlHdR~~y~~~~-----~~W~~~rL~P 222 (222)
T 1ty9_A 175 PLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSD-----TGWNVRRLQP 222 (222)
T ss_dssp CCCCCTTEEEEEEEEEEEEEEEEEETTEEEEEEEEEET-----TEEEEEEECC
T ss_pred CCCCCCCEEEEEEEeeEEEEEECCCCCCcEEEEEEECC-----CCEEEEEecC
Confidence 235789999999999999999987 39999999842 3699999998
No 7
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.45 E-value=1.9e-13 Score=104.29 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=84.2
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCC---------CCCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPK---------EFSL 72 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~---------~~~~ 72 (126)
.|++|||+++...|+||+|+|.++++. ...++|++.+..+|..+-..++++++.+.... .. .
T Consensus 127 ~vaL~f~~~~~~rqVrI~G~ae~v~~~--------es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f-~ 197 (246)
T 2a2j_A 127 YASATFPWYQLGRQAHVQGPVSKVSTE--------EIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRF-A 197 (246)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCHH--------HHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHH-T
T ss_pred eEEEEEEeCCCCEEEEEEEEEEEeccH--------hHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhc-c
Confidence 489999999999999999999999865 23579999999999866545788898763210 01 1
Q ss_pred CC-CCCCCCcEEEEEEeccEEEeEEec---CCceEEEEeecCCCCCCCeEEEEccCC
Q 033147 73 DP-CAGPVDAFCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSPE 125 (126)
Q Consensus 73 d~-~~~~~~nF~vl~~~p~~VD~L~L~---~h~R~~f~~~~~~~~~~~W~~~~l~P~ 125 (126)
+. ..+.++||+++.|.|++|||++++ -|.|.+|++ + ..+.|+|.
T Consensus 198 ~~~~vp~pp~w~g~rv~P~~iEfWqg~~~rlHdR~~y~r-------~--~~~rL~P~ 245 (246)
T 2a2j_A 198 DQDQIPVPPGWGGYRIAPEIVEFWQGRENRMHNRIRVAN-------G--RLERLQPG 245 (246)
T ss_dssp TCSSCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEET-------T--EEEECCTT
T ss_pred cCCCCCCCCcEEEEEEEcCEEEEccCCCCCCeEEEEEEC-------C--CcEECCCC
Confidence 11 235789999999999999999997 299999986 1 88999985
No 8
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=98.06 E-value=4.1e-05 Score=53.34 Aligned_cols=69 Identities=16% Similarity=0.145 Sum_probs=54.5
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|++||+.+. ..|+||+|+|+++++. ....++|.. +|.+++.| .+ ..++
T Consensus 77 ~V~l~~~~~~-~~~v~i~G~a~~v~d~-------e~~~~~~~~-~p~~~~~~-~~---------------------~dp~ 125 (150)
T 2ig6_A 77 KVEISGMNKK-GQWIRLTGEVANDDRR-------EVKELALEA-VPSLKNMY-SV---------------------DDGI 125 (150)
T ss_dssp EEEEEEECTT-SCEEEEEEEEEECCCH-------HHHHHHHHH-SGGGGGTC-CT---------------------TSSC
T ss_pred CEEEEEEcCC-CeEEEEEEEEEEECCH-------HHHHHHHHh-ChHHHHhh-cC---------------------CCCc
Confidence 4789999998 6899999999999876 345779987 47777655 21 1357
Q ss_pred EEEEEEeccEEEeEEecCCc
Q 033147 82 FCVLILDPDQVDYLNLKSNQ 101 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L~~h~ 101 (126)
++|+.|.|.+++|++++++.
T Consensus 126 ~~l~~v~~~~a~~wd~~~~p 145 (150)
T 2ig6_A 126 FAVLYFTKGEGTICSFKGEN 145 (150)
T ss_dssp EEEEEEEEEEEEEECSSSCC
T ss_pred EEEEEEECCEEEEEeCCCCc
Confidence 99999999999999987543
No 9
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=97.98 E-value=9.6e-05 Score=51.81 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=53.7
Q ss_pred EEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCcE
Q 033147 3 HQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAF 82 (126)
Q Consensus 3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~nF 82 (126)
|.+||+.+....|+||+|+++++.+. ....++|. +..++-| |+.+ ..+++
T Consensus 65 v~l~~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~---~~~~~~~----~~~~----------------~~p~~ 114 (160)
T 2qea_A 65 AQFVVSDDGEGLYADLDGTLERSTDR-------EALDEFWS---FVADAWF----DGGQ----------------HDPDV 114 (160)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEECCH-------HHHHHSCC---HHHHHHC----TTCS----------------SCTTE
T ss_pred EEEEEECCCCCeEEEEEEEEEEEcCH-------HHHHHHHH---HHHHHHc----cCCC----------------CCCCE
Confidence 78999999999999999999999875 23345664 3344333 2111 23589
Q ss_pred EEEEEeccEEEeEEec-CCceEEEE
Q 033147 83 CVLILDPDQVDYLNLK-SNQKLKFM 106 (126)
Q Consensus 83 ~vl~~~p~~VD~L~L~-~h~R~~f~ 106 (126)
+|+.|.|+++++++.+ ++.|..|.
T Consensus 115 ~v~~i~p~~~e~w~~~~~~l~~~~~ 139 (160)
T 2qea_A 115 CLLKFTPASGEISITEGGGARFLYE 139 (160)
T ss_dssp EEEEEEEEEEEEEEECCSSHHHHHH
T ss_pred EEEEEECCEEEEEECCCChHHHHHH
Confidence 9999999999999987 45555554
No 10
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=97.94 E-value=5e-05 Score=52.61 Aligned_cols=68 Identities=15% Similarity=0.063 Sum_probs=51.1
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|.+||+.+....|+||+|+++++++. +..+++|. +..++-| |+.+ ..++
T Consensus 68 ~v~l~~~~~~~~~~v~v~G~a~~~~d~-------~~~~~~~~---~~~~~~~----~~g~----------------~dp~ 117 (147)
T 3dmb_A 68 RVIGAFSSKGHDLFASISGSLREDTDP-------AVVDRLWN---PYVAAWY----EGGK----------------DDPK 117 (147)
T ss_dssp EEEEEEECTTSSEEEEEEEEEEECCCH-------HHHHHHCC---HHHHHHC----TTGG----------------GCTT
T ss_pred eEEEEEEcCCCCeEEEEEEEEEEecCH-------HHHHHHhh---HHHHHHc----cCCC----------------CCCC
Confidence 378999999988999999999999765 34566773 4444433 1111 2368
Q ss_pred EEEEEEeccEEEeEEecC
Q 033147 82 FCVLILDPDQVDYLNLKS 99 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L~~ 99 (126)
++|+.|.|++++|++.++
T Consensus 118 ~~vl~v~p~~~e~W~~~~ 135 (147)
T 3dmb_A 118 LALLRLDADHAQIWLNGS 135 (147)
T ss_dssp CEEEEEEEEEEEEEECCC
T ss_pred EEEEEEEcCEEEEEECCC
Confidence 999999999999999874
No 11
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=97.93 E-value=9.1e-05 Score=50.99 Aligned_cols=76 Identities=13% Similarity=0.155 Sum_probs=54.6
Q ss_pred eEEEEEEECCC--CeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 033147 2 MHQICWYFTES--WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPV 79 (126)
Q Consensus 2 ~~E~~wy~~~t--~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~ 79 (126)
.|.+|++.+.. ..|+||+|+|+++++.. . .++|+. ++..+..| || +..
T Consensus 62 ~V~l~~~~~~~~~~~~v~i~G~a~~v~d~~-------~-~~~~~~-~p~~~~~~----~~-----------------~~~ 111 (150)
T 2hhz_A 62 RVAMTAISEEGYLIQVVRVEGTARPVENDY-------L-KTVFAD-NPYYQHIY----KD-----------------ESS 111 (150)
T ss_dssp EEEEEEEECSTTCCEEEEEEEEEEEECHHH-------H-HHHHTT-CGGGGGGC----C---------------------
T ss_pred eEEEEEEcCCcceeEEEEEEEEEEECCcHH-------H-HHHHHh-Chhhhhcc----cC-----------------CCC
Confidence 47889999876 38999999999998762 2 368865 46666555 11 123
Q ss_pred CcEEEEEEeccEEEeEEecCCceEEEEe
Q 033147 80 DAFCVLILDPDQVDYLNLKSNQKLKFMS 107 (126)
Q Consensus 80 ~nF~vl~~~p~~VD~L~L~~h~R~~f~~ 107 (126)
.+|+|+.|.|.++++++++++....|..
T Consensus 112 ~~~~v~~i~~~~~~~~d~~~~~~~~~~~ 139 (150)
T 2hhz_A 112 DTMQVFQIYAGHGFYHSLTQGHKYIFSI 139 (150)
T ss_dssp -CCEEEEEEEEEEEEEEGGGTEEEEEEE
T ss_pred CcEEEEEEEccEEEEEECCCCCcEEEEe
Confidence 5899999999999999998543337766
No 12
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=97.83 E-value=7.2e-05 Score=50.25 Aligned_cols=65 Identities=8% Similarity=0.083 Sum_probs=47.7
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|.+||+.+....|+||+|+|+++++. ....++|. +.+++-| |+. ...++
T Consensus 68 ~v~l~~~~~~~~~~v~v~G~a~~~~d~-------~~~~~~~~---~~~~~~~----~~~----------------~~~~~ 117 (134)
T 2re7_A 68 RIGLTYATQDEKNYVSISGDAELPTDK-------AKLDELWS---PVYSAFF----ANG----------------KEDAN 117 (134)
T ss_dssp EEEEEEECTTSSCEEEEEEEEECCCCH-------HHHHHHCC---HHHHHTS----TTG----------------GGCTT
T ss_pred cEEEEEEcCCCCeEEEEEEEEEEECCH-------HHHHHHhh---HHHHHHc----cCC----------------CCCCC
Confidence 478999999999999999999999875 23455663 3344333 211 12358
Q ss_pred EEEEEEeccEEEeEE
Q 033147 82 FCVLILDPDQVDYLN 96 (126)
Q Consensus 82 F~vl~~~p~~VD~L~ 96 (126)
++|+.|.|++|++++
T Consensus 118 ~~~~~i~~~~~~~w~ 132 (134)
T 2re7_A 118 IQLIKVVPHGVECWL 132 (134)
T ss_dssp EEEEEEEEEEEEEEC
T ss_pred EEEEEEEeCEEEEec
Confidence 999999999999986
No 13
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=97.67 E-value=0.00024 Score=51.31 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=54.4
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|.+||+.+....|++|+|+|.++.+. ....++|. +..++-| |+.+ ..++
T Consensus 87 ~v~l~~~~~~~~~~V~v~G~a~vv~D~-------e~~~~lw~---~~~~~~~----p~g~----------------~dP~ 136 (182)
T 3u35_A 87 RVIGAFSSKGHDLFASISGSLREDTDP-------AMVDRLWN---PYVAAWY----EGGK----------------TDPN 136 (182)
T ss_dssp EEEEEEECTTSSEEEEEEEEEEECCCH-------HHHHHHCC---HHHHTTC----TTGG----------------GCTT
T ss_pred cEEEEEECCCCCeEEEEEEEEEEEcCH-------HHHHHHHH---HHHHHhc----cCCC----------------CCCC
Confidence 378999999888999999999999765 34466783 4444333 1111 1358
Q ss_pred EEEEEEeccEEEeEEecC--CceEEEE
Q 033147 82 FCVLILDPDQVDYLNLKS--NQKLKFM 106 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L~~--h~R~~f~ 106 (126)
++||.|.|.+++|++..+ =-|+.+.
T Consensus 137 ~~vlrv~p~~~e~Wd~~~~~~~~~~~~ 163 (182)
T 3u35_A 137 LALLRLDADHAQIWLNESSLLAGIKVL 163 (182)
T ss_dssp EEEEEEEEEEEEEEEEEEEECCCEEEE
T ss_pred EEEEEEEeCEEEEEeCCCCceeeeeee
Confidence 999999999999999973 3455553
No 14
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=97.63 E-value=0.00037 Score=47.54 Aligned_cols=67 Identities=12% Similarity=0.193 Sum_probs=49.0
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|.++|+.+....|+||.|+|+++.++ ....++|+.+ ++. |. |+.+ ...+
T Consensus 72 ~v~l~~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~~~---~~~-~~---~~~~----------------~~~~ 121 (148)
T 2i02_A 72 QVNVSFSSPEQQRYVSISGTSQLVKDR-------NKMRELWKPE---LQT-WF---PKGL----------------DEPD 121 (148)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEECCH-------HHHHHHCCGG---GGG-TC---TTGG----------------GCTT
T ss_pred cEEEEEEcCCCCeEEEEEEEEEEEcCH-------HHHHHHHhHH---HHH-Hc---cCCC----------------CCCC
Confidence 378999999999999999999999865 3445677543 222 21 2211 1246
Q ss_pred EEEEEEeccEEEeEEec
Q 033147 82 FCVLILDPDQVDYLNLK 98 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L~ 98 (126)
|+|+.|.|+++++++.+
T Consensus 122 ~~v~~i~~~~~~~~~~~ 138 (148)
T 2i02_A 122 IALLKVNINQVNYWDST 138 (148)
T ss_dssp EEEEEEEEEEEEEEEGG
T ss_pred EEEEEEEeCEEEEEcCC
Confidence 99999999999999976
No 15
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=97.24 E-value=0.0018 Score=43.70 Aligned_cols=68 Identities=9% Similarity=0.145 Sum_probs=49.2
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|.++++.+....+++|.|+++++++. ....++|..+... -| |+.+ ...+
T Consensus 67 ~v~l~~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~~~~~~---~~----~~~~----------------~~~~ 116 (146)
T 2hq7_A 67 KICLYFVDDNKFAGLMLVGTIEILHDR-------ASKEMLWTDGCEI---YY----PLGI----------------DDPD 116 (146)
T ss_dssp EEEEEEECSSSSEEEEEEEEEEEECCH-------HHHHHHCCTTHHH---HC----TTGG----------------GCTT
T ss_pred eEEEEEECCCCceEEEEEEEEEEEcCH-------HHHHHHHHHHHHH---HC----CCCC----------------CCCC
Confidence 478899999888999999999999876 2345667544322 21 2111 1257
Q ss_pred EEEEEEeccEEEeEEecC
Q 033147 82 FCVLILDPDQVDYLNLKS 99 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L~~ 99 (126)
|+|+.|.|+++++++..+
T Consensus 117 ~~~~~i~p~~~~~w~~~~ 134 (146)
T 2hq7_A 117 YTALCFTAEWGNYYRHLK 134 (146)
T ss_dssp EEEEEEEEEEEEEEETTE
T ss_pred EEEEEEEccEEEEEeCCC
Confidence 999999999999998653
No 16
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=97.03 E-value=0.006 Score=41.12 Aligned_cols=66 Identities=12% Similarity=0.228 Sum_probs=44.4
Q ss_pred EEEEE-E--ECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 033147 3 HQICW-Y--FTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPV 79 (126)
Q Consensus 3 ~E~~w-y--~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~ 79 (126)
|.+|+ | .+....+++|+|+|+++.+. ....++|+ +.++.-| +| ...
T Consensus 62 v~l~v~~~~d~~~~~~v~v~G~a~~~~d~-------~~~~~~~~---~~~~~~~----~~-----------------~~~ 110 (139)
T 3ec6_A 62 VHVLLGREGKKLDEDYIEVEGLASIEEDS-------TLKNKFWN---NSLKRWL----LR-----------------PED 110 (139)
T ss_dssp EEEEECC---CTTCCEEEEEEEEEEECCH-------HHHHHHCC---GGGGGTC----SS-----------------TTC
T ss_pred EEEEEEecCCCCCccEEEEEEEEEEEcCH-------HHHHHHHH---HHHHHHh----CC-----------------CCC
Confidence 56776 3 35667899999999999865 34567886 3333222 11 013
Q ss_pred CcEEEEEEeccEEEeEEecC
Q 033147 80 DAFCVLILDPDQVDYLNLKS 99 (126)
Q Consensus 80 ~nF~vl~~~p~~VD~L~L~~ 99 (126)
.+|+||.|+|+++++++..+
T Consensus 111 ~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 111 PNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp TTEEEEEEEEEEEEEEC---
T ss_pred CCEEEEEEEeeEEEEEcCCC
Confidence 58999999999999999875
No 17
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=96.40 E-value=0.008 Score=39.70 Aligned_cols=63 Identities=22% Similarity=0.404 Sum_probs=41.5
Q ss_pred EEEEEEE-CCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 3 HQICWYF-TESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 3 ~E~~wy~-~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
|.+++.+ +....+++|.|+|.++.+. ....++|+.+ ++ .| . || ...++
T Consensus 64 v~l~v~~~~~~~~~v~v~G~a~~v~d~-------~~~~~~~~~~---~~-~~--~-~~-----------------~~~~~ 112 (128)
T 3db0_A 64 VCVLIGYDSPGSAFLEINGLASLEEDE-------SIKERIWENI---SK-DW--F-QG-----------------EDSPS 112 (128)
T ss_dssp EEEEECCCSTTCCEEEEEEEEEECCCH-------HHHHHHHHHH---CS-SC--C-C-----------------------
T ss_pred eEEEEEEcCCCCcEEEEEEEEEEEcCH-------HHHHHHHHHH---HH-Hh--C-CC-----------------CCCCC
Confidence 4555545 7788899999999999865 3456788532 11 12 1 21 01267
Q ss_pred EEEEEEeccEEEeEE
Q 033147 82 FCVLILDPDQVDYLN 96 (126)
Q Consensus 82 F~vl~~~p~~VD~L~ 96 (126)
|+||.|.|++++|++
T Consensus 113 ~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 113 FVVIKIVPEQIRILN 127 (128)
T ss_dssp CCEEEEEEEEEEEEC
T ss_pred EEEEEEEeEEEEEec
Confidence 999999999999985
No 18
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=96.30 E-value=0.022 Score=37.93 Aligned_cols=64 Identities=14% Similarity=0.345 Sum_probs=44.8
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCc
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDA 81 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~n 81 (126)
.|.++++.+. .+++|.|++++++++ ....++|..+. ++.| |+. ....+
T Consensus 69 ~v~l~~~~~~--~~v~v~G~a~~v~d~-------~~~~~~~~~~~---~~~~----p~~----------------~~~~~ 116 (141)
T 2fhq_A 69 KAGLCFQEKG--DSVALMGEVEVVTDE-------KLKQELWQDWF---IEHF----PGG----------------PTDPG 116 (141)
T ss_dssp EEEEEEEETT--EEEEEEEEEEEECCH-------HHHHHSCCGGG---GGTC----TTC----------------TTCTT
T ss_pred cEEEEEEeCC--CEEEEEEEEEEECCH-------HHHHHHHHHHH---HHHc----CCC----------------CCCCC
Confidence 3678888876 599999999999875 34456776442 2111 211 01257
Q ss_pred EEEEEEeccEEEeEEe
Q 033147 82 FCVLILDPDQVDYLNL 97 (126)
Q Consensus 82 F~vl~~~p~~VD~L~L 97 (126)
|+|+.|+|+++++++.
T Consensus 117 ~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 117 YVLLKFTANHATYWIE 132 (141)
T ss_dssp EEEEEEEEEEEEEEET
T ss_pred EEEEEEEcCEEEEeeC
Confidence 9999999999999986
No 19
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=95.39 E-value=0.029 Score=38.65 Aligned_cols=73 Identities=7% Similarity=-0.071 Sum_probs=47.2
Q ss_pred EEEEEEECCCCeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCcE
Q 033147 3 HQICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAF 82 (126)
Q Consensus 3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~nF 82 (126)
|.+|++.+ ..+++|.|+|+++.++... .++|+.+. ..|.+. |. + ....|
T Consensus 73 Vsl~v~~~--~~~v~v~G~a~~v~d~~~~-------~~~~~~~~----~k~~~~-~~-------------~----~~~~~ 121 (155)
T 2iab_A 73 VRLGIGPT--RDLVLVEGTALPLEPAGLP-------DGVGDTFA----EKTGFD-PR-------------R----LTTSY 121 (155)
T ss_dssp EEEEESST--TCEEEEEEEEEEECGGGCC-------TTHHHHHH----HHHSCC-GG-------------G----CSSCE
T ss_pred EEEEEEcC--CCEEEEEEEEEEecCchhH-------HHHHHHHH----HHhCCC-cc-------------c----cCCCE
Confidence 56666655 5799999999999865322 23343322 123110 10 0 11359
Q ss_pred EEEEEeccEEEeEEec--CCceEEEE
Q 033147 83 CVLILDPDQVDYLNLK--SNQKLKFM 106 (126)
Q Consensus 83 ~vl~~~p~~VD~L~L~--~h~R~~f~ 106 (126)
+++.|.|++|...+-. -|.|.+|.
T Consensus 122 ~~~ri~p~~v~~w~~~~~l~~r~~~~ 147 (155)
T 2iab_A 122 LYFRISPRRVQAWREANELSGRELMR 147 (155)
T ss_dssp EEEEEEEEEEEEESSGGGSTTCEEEE
T ss_pred EEEEEEEEEEEEecCCCCcCcceEEE
Confidence 9999999999998855 38999997
No 20
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=94.45 E-value=0.07 Score=37.06 Aligned_cols=67 Identities=4% Similarity=-0.143 Sum_probs=49.3
Q ss_pred eEEEEEEECCC---CeeEEEE-EEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCC
Q 033147 2 MHQICWYFTES---WDQFRIN-GRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAG 77 (126)
Q Consensus 2 ~~E~~wy~~~t---~~Q~Ri~-G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~ 77 (126)
.|++|.+.++. +.|+|++ |+|.+.++.. .+.+..+|++. |..+..|. .
T Consensus 63 ~V~i~~~~~d~~~~~~~IRi~~G~a~~~~~~~-----~~~k~~~~e~~-P~~k~~y~-------------------~--- 114 (145)
T 3ba3_A 63 DIAFITIPNDGTAGNPYLRAQHVKLQRSTKTM-----TDLLPQYLETV-PNYQQVWD-------------------A--- 114 (145)
T ss_dssp EEEEEEEECTTCTTCCEEEEEEEEEEECSCCH-----HHHHHHHHHHS-TTHHHHHH-------------------H---
T ss_pred CEEEEEECCCCCccceEEEEEeEEEEEcCCch-----HHHHHHHHHhC-hhhhhccc-------------------C---
Confidence 48999998887 7999999 9999975421 24567889744 45554440 0
Q ss_pred CCCcEEEEEEeccEEEeEE
Q 033147 78 PVDAFCVLILDPDQVDYLN 96 (126)
Q Consensus 78 ~~~nF~vl~~~p~~VD~L~ 96 (126)
..++|.|+.|.+.++.+..
T Consensus 115 ~~~~l~vf~i~~~~a~~~~ 133 (145)
T 3ba3_A 115 IGSTLVVFELKLTDLFVDA 133 (145)
T ss_dssp HGGGEEEEEEECSEEEEEC
T ss_pred CCCcEEEEEEECCEEEEEC
Confidence 1247999999999999887
No 21
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=93.75 E-value=0.12 Score=35.06 Aligned_cols=27 Identities=11% Similarity=0.028 Sum_probs=24.8
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGS 28 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~ 28 (126)
.|.++|+.+.++.++||.|++.++.++
T Consensus 87 ~V~l~~~~~~~~~~v~i~G~a~~v~d~ 113 (140)
T 2htd_A 87 KVALVAADVPSHTAVRVLATAEVHEDD 113 (140)
T ss_dssp CEEEEEEETTTTEEEEEEEEEEEESSS
T ss_pred eEEEEEEecCCCCEEEEEEEEEEecCh
Confidence 378999999999999999999999877
No 22
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=93.59 E-value=0.15 Score=34.83 Aligned_cols=69 Identities=9% Similarity=0.121 Sum_probs=42.7
Q ss_pred eEEEEEEECCC-------CeeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCC
Q 033147 2 MHQICWYFTES-------WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDP 74 (126)
Q Consensus 2 ~~E~~wy~~~t-------~~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~ 74 (126)
.|.++++.+.. ..+++|.|+|.+++++. +.|...+..+....+..++ .|
T Consensus 78 ~vsl~v~~~~~~~~~~~~~~~v~i~G~a~~v~~~~--~~~~~~~~~~~~~~p~~~~-~~--------------------- 133 (157)
T 1vl7_A 78 LVNVLFVDDEAKTNQIFARRRLSFDCTATLIERES--QKWNQVVDQFQERFGQIIE-VL--------------------- 133 (157)
T ss_dssp EEEEEEECCGGGCSSGGGCCEEEEEEEEEEECTTS--HHHHHHHHHHHHHHTHHHH-HH---------------------
T ss_pred cEEEEEEcCccccCCcccCceEEEEEEEEEcCCCc--HHHHHHHHHHHHHCchHHH-Hh---------------------
Confidence 36778876542 46899999999998763 2344443333332222111 00
Q ss_pred CCCCCCcEEEEEEeccEEEeEE
Q 033147 75 CAGPVDAFCVLILDPDQVDYLN 96 (126)
Q Consensus 75 ~~~~~~nF~vl~~~p~~VD~L~ 96 (126)
....+|+|+.|+|+++.|+.
T Consensus 134 --~~~~~~~l~~l~~~~~~~~~ 153 (157)
T 1vl7_A 134 --RGLADFRIFQLTPKEGRFVI 153 (157)
T ss_dssp --HHHSCCEEEEEEEEEEEEEC
T ss_pred --hccCCEEEEEEEEeEEEEEc
Confidence 01247999999999999874
No 23
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=92.02 E-value=0.99 Score=30.37 Aligned_cols=75 Identities=5% Similarity=0.080 Sum_probs=46.1
Q ss_pred EEEEEEECCCC---eeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 033147 3 HQICWYFTESW---DQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPV 79 (126)
Q Consensus 3 ~E~~wy~~~t~---~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~ 79 (126)
|.++++.+... ..++|.|++.++.++ ....++|+.+... |..+ . .+ ..... .....
T Consensus 70 v~l~~~~~~~~~~~~~v~~~G~a~~v~d~-------~~~~~~~~~l~~~----~~~~---~-~~--~~~~~----~~~~~ 128 (162)
T 1rfe_A 70 VSFLLEDGDTYDTLRGVSFEGVAEIVEEP-------EALHRVGVSVWER----YTGP---Y-TD--ECKPM----VDQMM 128 (162)
T ss_dssp EEEEEEECSSGGGCEEEEEEEEEEEECCH-------HHHHHHHHHHHHH----HTCC---C-CG--GGHHH----HHHHT
T ss_pred EEEEEEcCCCcccccEEEEEEEEEEeCCh-------HHHHHHHHHHHHH----hcCc---c-cc--hhHHH----HHhcc
Confidence 67888877653 469999999999875 2345567655422 2111 0 00 00000 00123
Q ss_pred CcEEEEEEeccEEEeEEec
Q 033147 80 DAFCVLILDPDQVDYLNLK 98 (126)
Q Consensus 80 ~nF~vl~~~p~~VD~L~L~ 98 (126)
.+++|+.|.|++|..++.+
T Consensus 129 ~~~~v~~i~~~~~~~~~~~ 147 (162)
T 1rfe_A 129 NKRVGVRIVARRTRSWDHR 147 (162)
T ss_dssp TTEEEEEEEEEEEEEEEGG
T ss_pred CceEEEEEEEEEEEEeccc
Confidence 6899999999999998864
No 24
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=90.95 E-value=1.2 Score=29.14 Aligned_cols=28 Identities=11% Similarity=0.123 Sum_probs=21.8
Q ss_pred eEEEEEEECCC-CeeEEEEEEEEEEcCCC
Q 033147 2 MHQICWYFTES-WDQFRINGRVDVIDGSN 29 (126)
Q Consensus 2 ~~E~~wy~~~t-~~Q~Ri~G~~~ii~~~~ 29 (126)
.|.++++.+.. ..+++|.|++.++.++.
T Consensus 62 ~v~l~v~~~~~~~~~v~v~G~a~~v~~~~ 90 (131)
T 3f7e_A 62 AVAMSVIDPDNPYRYLEVRGLVEDIVPDP 90 (131)
T ss_dssp EEEEEEECSSCTTCEEEEEEEEEEEEECT
T ss_pred cEEEEEEcCCCCeeEEEEEEEEEEeccCc
Confidence 36778887764 67999999998887653
No 25
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=86.05 E-value=3.6 Score=26.91 Aligned_cols=24 Identities=13% Similarity=0.061 Sum_probs=19.1
Q ss_pred EEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147 3 HQICWYFTESWDQFRINGRVDVIDGS 28 (126)
Q Consensus 3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~ 28 (126)
|.+|++.+. ..++|.|+++++.++
T Consensus 71 V~l~~~~~~--~~v~v~G~a~~~~d~ 94 (137)
T 2asf_A 71 AVLSQVDGA--RWLSLEGRAAVNSDI 94 (137)
T ss_dssp EEEEEEETT--EEEEEEEEEEEECCH
T ss_pred EEEEEECCC--CEEEEEEEEEEecCH
Confidence 677877764 678899999999865
No 26
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=68.49 E-value=7.4 Score=26.44 Aligned_cols=25 Identities=4% Similarity=0.116 Sum_probs=21.0
Q ss_pred eEEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147 2 MHQICWYFTESWDQFRINGRVDVIDGS 28 (126)
Q Consensus 2 ~~E~~wy~~~t~~Q~Ri~G~~~ii~~~ 28 (126)
.|++|++.+.. -++|+|+|.++.+.
T Consensus 71 ~Vsl~v~~~~~--~~~i~G~A~~v~d~ 95 (151)
T 2q9k_A 71 VFTLIFFADQS--TYSLTCTDVAAWET 95 (151)
T ss_dssp CEEEEEEETTE--EEEEEEEEEEEECC
T ss_pred cEEEEEECCCC--EEEEEEEEEEEeCc
Confidence 37889988764 68999999999986
No 27
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=66.14 E-value=16 Score=23.59 Aligned_cols=26 Identities=12% Similarity=0.175 Sum_probs=21.9
Q ss_pred EEEEEEECCCCeeEEEEEEEEEEcCC
Q 033147 3 HQICWYFTESWDQFRINGRVDVIDGS 28 (126)
Q Consensus 3 ~E~~wy~~~t~~Q~Ri~G~~~ii~~~ 28 (126)
|.++++.++...+++|.|++.++++.
T Consensus 67 v~l~~~~~~~~~~v~v~G~a~~~~d~ 92 (147)
T 2aq6_A 67 ASILVDADDGWSYAVAEGTAQLTPPA 92 (147)
T ss_dssp EEEEEECTTSSCEEEEEEECEECCCC
T ss_pred EEEEEEcCCCcEEEEEEEEEEEcCCC
Confidence 66788877766789999999999875
No 28
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=48.79 E-value=40 Score=22.05 Aligned_cols=49 Identities=8% Similarity=-0.031 Sum_probs=31.6
Q ss_pred eeEEEEEEEEEEcCCCCChHHHHHHHHHHhcCCHHHHhccCCCCCCCcCCCCCCCCCCCCCCCCCCCcEEEEEEeccEEE
Q 033147 14 DQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVD 93 (126)
Q Consensus 14 ~Q~Ri~G~~~ii~~~~~~~~~~~~r~~~W~~ls~~~R~~y~~p~PG~~~~~~~~~~~~~d~~~~~~~nF~vl~~~p~~VD 93 (126)
.-+.+.|+++++.+. .+..++|+.+. ..| .| ....+|+.|.|++|.
T Consensus 90 ~sV~v~G~a~~v~d~-------~e~~~~l~~~~----~~~---~~--------------------~~~~~viri~~~~~t 135 (148)
T 3cp3_A 90 WSVVLKGNAYVVRDT-------EEARHADTLGL----KPW---LP--------------------TLKYNFVRIDVREVS 135 (148)
T ss_dssp EEEEEEEEEEECCCH-------HHHHHHTTSCC----CCC---CT--------------------TCCCEEEEEEEEEEE
T ss_pred eEEEEEEEEEEECCH-------HHHHHHHhccc----ccc---CC--------------------CCceEEEEEEeEEEE
Confidence 368999999999876 23455666421 001 01 146799999999887
Q ss_pred eEE
Q 033147 94 YLN 96 (126)
Q Consensus 94 ~L~ 96 (126)
--.
T Consensus 136 gk~ 138 (148)
T 3cp3_A 136 GRA 138 (148)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 29
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=48.41 E-value=20 Score=23.85 Aligned_cols=26 Identities=12% Similarity=0.013 Sum_probs=20.5
Q ss_pred EEEEEEECC------CCeeEEEEEEEEEEcCC
Q 033147 3 HQICWYFTE------SWDQFRINGRVDVIDGS 28 (126)
Q Consensus 3 ~E~~wy~~~------t~~Q~Ri~G~~~ii~~~ 28 (126)
+.+.++.++ ...=|||+|++++++++
T Consensus 64 vai~v~~~e~~g~~g~~~gf~ikGta~~~~~G 95 (122)
T 3a6r_A 64 VLMTLGSRKVAGRNGPGTGFLIRGSAAFRTDG 95 (122)
T ss_dssp EEEEEEEEEEECSSSEEEEEEEEEEEEEESSS
T ss_pred EEEEEEecccccccCCCceEEEEEEEEEEecc
Confidence 556777665 44559999999999998
No 30
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=32.52 E-value=1.2e+02 Score=20.57 Aligned_cols=21 Identities=0% Similarity=-0.236 Sum_probs=15.9
Q ss_pred CCCcEEEEEEeccEEEeEEec
Q 033147 78 PVDAFCVLILDPDQVDYLNLK 98 (126)
Q Consensus 78 ~~~nF~vl~~~p~~VD~L~L~ 98 (126)
.....+|+.|.|++|.--.-.
T Consensus 145 ~~~~~~v~rI~i~~itgk~k~ 165 (185)
T 2hti_A 145 LGSRTAIYKISCRERTAKVNE 165 (185)
T ss_dssp CCSSEEEEEEEEEEEEEEEEC
T ss_pred HhCCeEEEEEEeEEEEEEecc
Confidence 356789999999988765444
Done!