BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033149
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86KK2|FHIT_DICDI Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium discoideum GN=fhit
PE=3 SV=1
Length = 149
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P+R R DLT +E DLWL+AQ + + +E + + FAIQDG AGQTV HVHI
Sbjct: 39 VCPKRIVPRVKDLTKEEFTDLWLSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHI 98
Query: 74 HIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLL 123
HI+PRK E ND + EK++ + R+ EEM +E+ E R L
Sbjct: 99 HIIPRKKFDFENNDQIYNEIEKER-------EPRSYEEMEKESSELRPLF 141
>sp|O76463|NFT1_CAEEL Nitrilase and fragile histidine triad fusion protein NitFhit
OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1
Length = 440
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 10 GPFKIDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVP 69
G + P+R R DLT ET DL++ A+ V LE +H +S +QDG AGQTVP
Sbjct: 330 GHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVP 389
Query: 70 HVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLL 123
HVHIHI+PR+A +N+ + + K + + K R+ E+MA+EA YR+L+
Sbjct: 390 HVHIHILPRRAGDFGDNEIYQKLASHDK---EPERKPRSNEQMAEEAVVYRNLM 440
>sp|Q1KZG4|FHIT_BOVIN Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1
Length = 149
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P R RF D++ +E DL+ AQ VGT +E + + +SL F++QDGP+AGQTV HVH+
Sbjct: 38 VCPLRPVERFRDMSPEEVADLFQAAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHV 97
Query: 74 HIVPRKAASSEENDGNKDVKEKQ 96
HI+PRKA ND D EK
Sbjct: 98 HILPRKAGDFHRNDSIYDALEKH 120
>sp|P49789|FHIT_HUMAN Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3
Length = 147
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P R RF DL DE DL+ T Q VGT +E + +SL F++QDGP+AGQTV HVH+
Sbjct: 38 VCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHV 97
Query: 74 HIVPRKAASSEEND 87
H++PRKA ND
Sbjct: 98 HVLPRKAGDFHRND 111
>sp|O89106|FHIT_MOUSE Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN=Fhit PE=2 SV=3
Length = 150
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P R RF DL DE DL+ Q VGT +E + + +S+ F++QDGP+AGQTV HVH+
Sbjct: 38 VCPLRPVERFRDLHPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHV 97
Query: 74 HIVPRKAASSEENDGNKDVKEKQKLD 99
H++PRKA ND D E QK D
Sbjct: 98 HVLPRKAGDFPRNDNIYD--ELQKHD 121
>sp|Q9JIX3|FHIT_RAT Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegicus GN=Fhit PE=1
SV=1
Length = 150
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 16 PRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHI 75
P R RF DL DE DL+ Q VGT +E + + +S+ F++QDGP+AGQTV HVH+HI
Sbjct: 40 PLRPVERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHI 99
Query: 76 VPRKAASSEENDGNKDVKEKQKLD 99
+PRK+ ND D E QK D
Sbjct: 100 LPRKSGDFRRNDNIYD--ELQKHD 121
>sp|P49776|APH1_SCHPO Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=aph1 PE=1 SV=2
Length = 182
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 27/139 (19%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P+R R DLT E DL+ + + V +E AS+ IQDG AGQTVPHVH+
Sbjct: 39 VIPQRAVPRLKDLTPSELTDLFTSVRKVQQVIEKVFSASASNIGIQDGVDAGQTVPHVHV 98
Query: 74 HIVPRKAASSEEND-------------------GNK--------DVKEKQKLDLDIQMKN 106
HI+PRK A END GN+ +Q + D K
Sbjct: 99 HIIPRKKADFSENDLVYSELEKNEGNLASLYLTGNERYAGDERPPTSMRQAIPKDEDRKP 158
Query: 107 RTMEEMAQEADEYRSLLSK 125
RT+EEM +EA + S+
Sbjct: 159 RTLEEMEKEAQWLKGYFSE 177
>sp|O76464|NFT1_DROME Nitrilase and fragile histidine triad fusion protein NitFhit
OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1
Length = 460
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 10 GPFKIDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVP 69
G + +R R L E D++ T V LE ++ +S +QDG QAGQTVP
Sbjct: 347 GHVLVSTKRVTPRLCGLDCAEMADMFTTVCLVQRLLEKIYQTTSATVTVQDGAQAGQTVP 406
Query: 70 HVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMK-NRTMEEMAQEADEYRSLLSKI 126
HVH HI+PR+ ND + KLD + K RT+EE +EA YR L+ I
Sbjct: 407 HVHFHIMPRRLGDFGHND-----QIYVKLDERAEEKPPRTIEERIEEAQIYRKFLTDI 459
>sp|P49775|HNT2_YEAST Bis(5'-adenosyl)-triphosphatase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HNT2 PE=1 SV=2
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 10 GPFKIDPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTV 68
G I P R V DLT E++D + T Q + ++ +KA S+ AIQDGP+AGQ+V
Sbjct: 35 GHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSV 94
Query: 69 PHVHIHIVPR 78
PH+H HI+PR
Sbjct: 95 PHLHTHIIPR 104
>sp|C8Z5L6|HNT2_YEAS8 Bis(5'-adenosyl)-triphosphatase OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=HNT2 PE=3 SV=2
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 10 GPFKIDPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTV 68
G I P R V DLT E++D + T Q + ++ +KA S+ AIQDGP+AGQ+V
Sbjct: 35 GHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSV 94
Query: 69 PHVHIHIVPR 78
PH+H HI+PR
Sbjct: 95 PHLHTHIIPR 104
>sp|A6ZYQ3|HNT2_YEAS7 Bis(5'-adenosyl)-triphosphatase OS=Saccharomyces cerevisiae (strain
YJM789) GN=HNT2 PE=3 SV=2
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 10 GPFKIDPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTV 68
G I P R V DLT E++D + T Q + ++ +KA S+ AIQDGP+AGQ+V
Sbjct: 35 GHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSV 94
Query: 69 PHVHIHIVPR 78
PH+H HI+PR
Sbjct: 95 PHLHTHIIPR 104
>sp|B5VGI4|HNT2_YEAS6 Bis(5'-adenosyl)-triphosphatase OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=HNT2 PE=3 SV=2
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 10 GPFKIDPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTV 68
G I P R V DLT E++D + T Q + ++ +KA S+ AIQDGP+AGQ+V
Sbjct: 35 GHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSV 94
Query: 69 PHVHIHIVPR 78
PH+H HI+PR
Sbjct: 95 PHLHTHIIPR 104
>sp|C7GQV5|HNT2_YEAS2 Bis(5'-adenosyl)-triphosphatase OS=Saccharomyces cerevisiae (strain
JAY291) GN=HNT2 PE=3 SV=2
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 10 GPFKIDPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTV 68
G I P R V DLT E++D + T Q + ++ +KA S+ AIQDGP+AGQ+V
Sbjct: 35 GHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSV 94
Query: 69 PHVHIHIVPR 78
PH+H HI+PR
Sbjct: 95 PHLHTHIIPR 104
>sp|B3LFZ1|HNT2_YEAS1 Bis(5'-adenosyl)-triphosphatase OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=HNT2 PE=3 SV=2
Length = 206
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 10 GPFKIDPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTV 68
G I P R V DLT E++D + T Q + ++ +KA S+ AIQDGP+AGQ+V
Sbjct: 35 GHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSV 94
Query: 69 PHVHIHIVPR 78
PH+H HI+PR
Sbjct: 95 PHLHTHIIPR 104
>sp|P47378|YHIT_MYCGE Uncharacterized HIT-like protein MG132 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG132 PE=4
SV=1
Length = 141
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P++ AV F E + + L A+ + +L+ K S L + +G AGQ V H H+
Sbjct: 46 VIPKKHAVDFSSTDQKELQAVSLLAKQIALKLKMTLKPSGLNYVSNEGAIAGQVVFHFHL 105
Query: 74 HIVPR 78
HIVP+
Sbjct: 106 HIVPK 110
>sp|P75504|YHIT_MYCPN Uncharacterized 16.1 kDa HIT-like protein OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_273 PE=4 SV=1
Length = 144
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 37/65 (56%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ P++ AV + + + + L A+ + +L+ + + L + + +G +AGQ V H H+
Sbjct: 49 VIPKKHAVNYSSTDDESLKAVSLLAKEMALKLQQRLQPAGLNYVVNEGAKAGQEVFHYHM 108
Query: 74 HIVPR 78
H+VP+
Sbjct: 109 HVVPK 113
>sp|Q11066|YHI2_MYCTU Uncharacterized HIT-like protein Rv1262c/MT1300 OS=Mycobacterium
tuberculosis GN=Rv1262c PE=4 SV=2
Length = 144
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 4 IEQYAFGPFKIDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQ 63
I + G + P+R V D + D+ Q + + A + AI DG
Sbjct: 30 IRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADATHIAINDGRA 89
Query: 64 AGQTVPHVHIHIVP 77
A QTV HVH+H++P
Sbjct: 90 AFQTVFHVHLHVLP 103
>sp|Q58276|Y866_METJA Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0866 PE=4 SV=2
Length = 129
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 16 PRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAI--QDGPQAGQTVPHVHI 73
P++ RF ++ DE L + V +E K + I +G AGQ V HVH
Sbjct: 41 PKKHYERFDEMPDDE---LCNFIKGVKKTVEVLKKLGFDGYNIVNNNGRVAGQEVNHVHF 97
Query: 74 HIVPRKAASSE 84
HI+PR E
Sbjct: 98 HIIPRYEGDGE 108
>sp|Q9Z863|YHIT_CHLPN HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 OS=Chlamydia
pneumoniae GN=CPn_0488 PE=4 SV=1
Length = 110
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
I P++ RF D+ DE + + V + A I +G + GQ V H+HI
Sbjct: 39 IIPKKPIPRFQDIPGDEMILMAEAGKIVQELAAEFGIADGYRVVINNGAEGGQAVFHLHI 98
Query: 74 HIV 76
H++
Sbjct: 99 HLL 101
>sp|Q3ZX01|RPOB_DEHSC DNA-directed RNA polymerase subunit beta OS=Dehalococcoides sp.
(strain CBDB1) GN=rpoB PE=3 SV=1
Length = 1273
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 23 FGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAAS 82
FGD+ ++T+ T + ++ + F I D P G+ P H +++P + A
Sbjct: 117 FGDIPLMTALGTFITSGTERVVVSQLLRSPGVYFTISDDPATGR--PLCHTNLIPSRGAW 174
Query: 83 SEENDGNKDV 92
E N+DV
Sbjct: 175 LEFETSNRDV 184
>sp|Q3Z8V4|RPOB_DEHE1 DNA-directed RNA polymerase subunit beta OS=Dehalococcoides
ethenogenes (strain 195) GN=rpoB PE=3 SV=1
Length = 1272
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 23 FGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAAS 82
FGD+ ++T+ T + ++ + F I D P G+ P H +++P + A
Sbjct: 117 FGDIPLMTALGTFITSGTERVVVSQLLRSPGVYFTISDDPATGR--PLCHTNLIPSRGAW 174
Query: 83 SEENDGNKDV 92
E N+DV
Sbjct: 175 LEFETSNRDV 184
>sp|A5FRK5|RPOB_DEHSB DNA-directed RNA polymerase subunit beta OS=Dehalococcoides sp.
(strain BAV1) GN=rpoB PE=3 SV=2
Length = 1273
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 23 FGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAAS 82
FGD+ ++T+ T + ++ + F I D P G+ P H +++P + A
Sbjct: 117 FGDIPLMTALGTFITSGTERVVVSQLLRSPGVYFTISDDPATGR--PLCHTNLIPSRGAW 174
Query: 83 SEENDGNKDV 92
E N+DV
Sbjct: 175 LEFETSNRDV 184
>sp|O83079|Y036_TREPA Probable metal transport system membrane protein TP_0036
OS=Treponema pallidum (strain Nichols) GN=TP_0036 PE=3
SV=1
Length = 266
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 19 DAVRFGDLTADETRDLW----LTAQTVGTQLESYHKASSLAF 56
D+ FG + TRDLW L+ VGT YH+ LAF
Sbjct: 113 DSYLFGSILVVSTRDLWIMLALSVFCVGTLALRYHQLLYLAF 154
>sp|P32083|YHIT_MYCHR Uncharacterized 13.1 kDa HIT-like protein in P37 5'region
OS=Mycoplasma hyorhinis PE=4 SV=1
Length = 111
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 1 MSSIEQYAF--GPFKIDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAI 58
++ +++YA G F + P+ + ++ ++ L + A+ Q A+ I
Sbjct: 29 IAFLDKYAHTKGHFLVVPKNYSRNLFSISDEDLSYLIVKAREFALQEIKKLGATGFKLLI 88
Query: 59 QDGPQAGQTVPHVHIHIVP 77
+ P A Q++ H H+HI+P
Sbjct: 89 NNEPDAEQSIFHTHVHIIP 107
>sp|P94252|YHIT_BORBU Uncharacterized HIT-like protein BB_0379 OS=Borrelia burgdorferi
(strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
GN=BB_0379 PE=4 SV=1
Length = 139
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Query: 61 GPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQ 103
G AGQ V H H H++PR +NDG K KL+L+++
Sbjct: 90 GAGAGQEVFHTHFHVIPR-----FKNDG-FGFKRGNKLNLEVE 126
>sp|P95937|YHIT_SULSO Uncharacterized HIT-like protein SSO2163 OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=SSO2163 PE=4 SV=1
Length = 139
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 14 IDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHI 73
+ PR F +++ D L + + ++ KA + G AGQ V H H
Sbjct: 39 VVPRTHYENFLEISEDVIPYLCTAVRKISIAVKKALKADGIRILTNIGKSAGQVVFHSHF 98
Query: 74 HIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEA 116
HIVP S++ D KD +++ ++R E Q+A
Sbjct: 99 HIVP---TWSQDPDIMKDFVPRKE-------QSREYYEYVQKA 131
>sp|P97467|AMD_MOUSE Peptidyl-glycine alpha-amidating monooxygenase OS=Mus musculus
GN=Pam PE=1 SV=2
Length = 979
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 12 FKIDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHV 71
F + R +A G ++DE +L++ +E+ H S + P +T+P
Sbjct: 294 FTGEGRTEATHIGGTSSDEMCNLYIM-----YYMEAKHAVSFMTCTQNVAPDMFRTIPEE 348
Query: 72 HIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLLSKI 126
+P K+ + +K+ + K+K L IQ + EE ++ D Y SLLSK+
Sbjct: 349 ANIPIPVKSDMVMIHGHHKETENKEKSAL-IQQPKQGEEEAFEQGDFY-SLLSKL 401
>sp|O07513|HIT_BACSU Protein hit OS=Bacillus subtilis (strain 168) GN=hit PE=1 SV=1
Length = 145
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 59 QDGPQAGQTVPHVHIHIVPR 78
+G +AGQ+V H H+HI+PR
Sbjct: 89 NNGEKAGQSVFHYHMHIIPR 108
>sp|P42855|ZB14_BRAJU 14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1
Length = 113
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 56 FAIQDGPQAGQTVPHVHIHIV 76
I DGPQ Q+V H+H+H++
Sbjct: 83 IVINDGPQGCQSVYHIHVHLI 103
>sp|O06201|AP4A_MYCTU AP-4-A phosphorylase OS=Mycobacterium tuberculosis GN=MT2688 PE=1
SV=1
Length = 195
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 3 SIEQYAFGPFKIDPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGP 62
++ Y G + P R DLT E+ +L Q +++ + + G
Sbjct: 83 NLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPHGFNVGLNLGT 142
Query: 63 QAGQTVP-HVHIHIVPR 78
AG ++ H+H+H+VPR
Sbjct: 143 SAGGSLAEHLHVHVVPR 159
>sp|O50401|OTSB_MYCTU Trehalose-phosphate phosphatase OS=Mycobacterium tuberculosis
GN=otsB PE=1 SV=1
Length = 391
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 9 FGPFKIDPRR-DAVRFGDLTADETRDLWLTAQTVG 42
GP IDPRR DAV F D T D T++L Q VG
Sbjct: 4 LGPVTIDPRRHDAVLF-DTTLDATQELVRQLQEVG 37
>sp|A5U846|OTSB_MYCTA Trehalose-phosphate phosphatase OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=otsB PE=3 SV=1
Length = 391
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 9 FGPFKIDPRR-DAVRFGDLTADETRDLWLTAQTVG 42
GP IDPRR DAV F D T D T++L Q VG
Sbjct: 4 LGPVTIDPRRHDAVLF-DTTLDATQELVRQLQEVG 37
>sp|A1KP65|OTSB_MYCBP Trehalose-phosphate phosphatase OS=Mycobacterium bovis (strain
BCG / Pasteur 1173P2) GN=otsB PE=3 SV=1
Length = 391
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 9 FGPFKIDPRR-DAVRFGDLTADETRDLWLTAQTVG 42
GP IDPRR DAV F D T D T++L Q VG
Sbjct: 4 LGPVTIDPRRHDAVLF-DTTLDATQELVRQLQEVG 37
>sp|Q7TWL7|OTSB_MYCBO Trehalose-phosphate phosphatase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=otsB PE=3 SV=1
Length = 391
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 9 FGPFKIDPRR-DAVRFGDLTADETRDLWLTAQTVG 42
GP IDPRR DAV F D T D T++L Q VG
Sbjct: 4 LGPVTIDPRRHDAVLF-DTTLDATQELVRQLQEVG 37
>sp|Q1KVT5|RR4_SCEOB 30S ribosomal protein S4, chloroplastic OS=Scenedesmus obliquus
GN=rps4 PE=3 SV=1
Length = 251
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 37 TAQTVGTQLESYHKASSLAFAIQDGPQ---AGQTVPHVHIHIVPRKAASSEENDGNKDVK 93
T Q + LE + ++ F + P A Q + H HIH+ +K + KDV
Sbjct: 100 TGQVLLQLLEM--RLDNIVFRLNMAPTICAARQLISHGHIHVNSKKVNIASYMCKPKDVI 157
Query: 94 EKQKLDLDIQMKNRTMEEMAQEADEYRSLLSK 125
+++ NR ++E +Q+ Y+ L +
Sbjct: 158 SVSMKQSSLKLVNRNLQEYSQKMSAYKKRLER 189
>sp|P0A5B5|YHI1_MYCTU Uncharacterized HIT-like protein Rv0759c/MT0784 OS=Mycobacterium
tuberculosis GN=Rv0759c PE=4 SV=1
Length = 133
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 50 KASSLAFAIQDGPQ--AGQTVPHVHIHIVPRKAAS 82
KA AF+ Q AG VPH+HIH+ P ++ S
Sbjct: 68 KAVCRAFSTQRAGMIIAGLEVPHLHIHVFPTRSLS 102
>sp|P0A5B6|YHI1_MYCBO Uncharacterized HIT-like protein Mb0782c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0782c PE=4 SV=1
Length = 133
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 50 KASSLAFAIQDGPQ--AGQTVPHVHIHIVPRKAAS 82
KA AF+ Q AG VPH+HIH+ P ++ S
Sbjct: 68 KAVCRAFSTQRAGMIIAGLEVPHLHIHVFPTRSLS 102
>sp|P33235|FLGK_ECOLI Flagellar hook-associated protein 1 OS=Escherichia coli (strain
K12) GN=flgK PE=3 SV=3
Length = 547
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 77 PRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLLSKI 126
+ A +SEE+ G+ D + Q L LD+Q ++T+ D Y SL+S I
Sbjct: 431 AKIAMASEEDAGDSDNRNGQAL-LDLQSNSKTVGGAKSFNDAYASLVSDI 479
>sp|P32084|Y1390_SYNE7 Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1
Length = 114
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 57 AIQDGPQAGQTVPHVHIHIV 76
I GP GQTV H+HIH++
Sbjct: 85 VINTGPAGGQTVYHLHIHLL 104
>sp|Q2QS71|H2A7_ORYSJ Probable histone H2A.7 OS=Oryza sativa subsp. japonica
GN=Os12g0438000 PE=2 SV=1
Length = 135
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 64 AGQTVPHVHIHIVPRKAASSEENDGNKD 91
+G +P++H H++P+KA SS+ + + D
Sbjct: 106 SGGVMPNIHQHLLPKKAGSSKASHADDD 133
>sp|A2ZK29|H2A7_ORYSI Probable histone H2A.7 OS=Oryza sativa subsp. indica GN=OsI_036922
PE=3 SV=1
Length = 135
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 64 AGQTVPHVHIHIVPRKAASSEENDGNKD 91
+G +P++H H++P+KA SS+ + + D
Sbjct: 106 SGGVMPNIHQHLLPKKAGSSKASHADDD 133
>sp|A2ZK26|H2A8_ORYSI Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919
PE=3 SV=1
Length = 135
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 64 AGQTVPHVHIHIVPRKAASSEENDGNKD 91
+G +P++H H++P+KA SS+ + + D
Sbjct: 106 SGGVMPNIHQHLLPKKAGSSKASHADDD 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,970,737
Number of Sequences: 539616
Number of extensions: 1593194
Number of successful extensions: 4684
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 4634
Number of HSP's gapped (non-prelim): 109
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)