BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033152
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07760|RL23_TOBAC 60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1
Length = 140
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 126/140 (90%), Gaps = 14/140 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKPDLRKKVMPAV+VRQRKPWRRKDGVFMYFE GSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAIV 126
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>sp|P49690|RL23_ARATH 60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2
SV=3
Length = 140
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/140 (87%), Positives = 126/140 (90%), Gaps = 14/140 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFE GSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAIV 126
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>sp|Q9XEK8|RL23_TORRU 60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1
Length = 139
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/140 (82%), Positives = 120/140 (85%), Gaps = 15/140 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS G++GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 59
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEG--------------SAITGP 106
VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE SAITGP
Sbjct: 60 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 119
Query: 107 IGKECADLWPRIASAANAIV 126
IGKECADLWPRIASAANAIV
Sbjct: 120 IGKECADLWPRIASAANAIV 139
>sp|Q6PC14|RL23_DANRE 60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1
Length = 140
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/139 (76%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62832|RL23_RAT 60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1
Length = 140
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62831|RL23_PIG 60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1
Length = 140
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62830|RL23_MOUSE 60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=1 SV=1
Length = 140
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q90YU5|RL23_ICTPU 60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2
Length = 140
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62829|RL23_HUMAN 60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1
Length = 140
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q3T057|RL23_BOVIN 60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2
Length = 140
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q5REU2|RL23_PONAB 60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1
Length = 140
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKG+LNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q9GNE2|RL23_AEDAE 60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1
Length = 140
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 116/139 (83%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
+ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFE GSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q9XSU3|RL23_CANFA 60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1
Length = 140
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 114/139 (82%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
VMATVKKGKP LRKKV PAV++RQRK +RRKDGVF+YFE GSAITGP
Sbjct: 61 VMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWP IAS A +I
Sbjct: 121 VXKECADLWPXIASNAGSI 139
>sp|P48159|RL23_DROME 60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=2
SV=2
Length = 140
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 117/139 (84%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG+AG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
+ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFE GSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A++I
Sbjct: 121 VAKECADLWPRIASNASSI 139
>sp|O42867|RL23_SCHPO 60S ribosomal protein L23 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl23a PE=3 SV=1
Length = 139
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 108/137 (78%), Gaps = 14/137 (10%)
Query: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
RGRG ++G K+RM+LGLPV A +NCADN+GAKNLYI+SV G RLNRLP+A GDMV+A
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLA 62
Query: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGK 109
TVKKGKPDLRKK+MPA++VRQRK WRRKDGV++YFE GSAITGP+ K
Sbjct: 63 TVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAK 122
Query: 110 ECADLWPRIASAANAIV 126
ECADLWPRIAS A +V
Sbjct: 123 ECADLWPRIASNAGTVV 139
>sp|P48158|RL23_CAEEL 60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=3
SV=1
Length = 140
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 111/139 (79%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++ISV GI+GRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
+ +VKKGKP+LRKKV+ V++RQRK +RRKDG F+YFE GSAITGP
Sbjct: 61 FVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIA+ A +I
Sbjct: 121 VAKECADLWPRIAANAGSI 139
>sp|Q93140|RL23_BRUMA 60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1
Length = 140
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 111/139 (79%), Gaps = 14/139 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++I+V GIKGRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
+A+VKKGKP+LRKKV+ AV+VRQRK +RR DG +YFE GSAITGP
Sbjct: 61 FVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 107 IGKECADLWPRIASAANAI 125
+ KECADLWPRIAS A +I
Sbjct: 121 VTKECADLWPRIASNAGSI 139
>sp|P0CX42|RL23B_YEAST 60S ribosomal protein L23-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL23B PE=1 SV=1
Length = 137
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 106/133 (79%), Gaps = 14/133 (10%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECAD 113
GKP+LRKKVMPA++VRQ K WRR+DGVF+YFE GSAITGP+GKECAD
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 114 LWPRIASAANAIV 126
LWPR+AS + +V
Sbjct: 125 LWPRVASNSGVVV 137
>sp|P0CX41|RL23A_YEAST 60S ribosomal protein L23-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL23A PE=1 SV=1
Length = 137
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/133 (66%), Positives = 106/133 (79%), Gaps = 14/133 (10%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECAD 113
GKP+LRKKVMPA++VRQ K WRR+DGVF+YFE GSAITGP+GKECAD
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 114 LWPRIASAANAIV 126
LWPR+AS + +V
Sbjct: 125 LWPRVASNSGVVV 137
>sp|Q54G86|RL23_DICDI 60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3
SV=1
Length = 136
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/131 (62%), Positives = 102/131 (77%), Gaps = 13/131 (9%)
Query: 9 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68
+ G+ +R+SLGLPV A +N ADN+GAKNLY+I+VKGIKGRLNRLPSA VGDMVMATVKKG
Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKG 65
Query: 69 KPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEGSA-------------ITGPIGKECADLW 115
KP+LRKKV ++VRQRK W+RKDGV++YFE +A I GP+ KEC+DLW
Sbjct: 66 KPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGNILGPVAKECSDLW 125
Query: 116 PRIASAANAIV 126
P++A+ A IV
Sbjct: 126 PKVATNAGTIV 136
>sp|P0DJ53|RL23_TETTS 60S ribosomal protein L23 OS=Tetrahymena thermophila (strain SB210)
GN=RPL23 PE=1 SV=1
Length = 141
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 104/137 (75%), Gaps = 14/137 (10%)
Query: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
RGRGG G K ++SLGLPV A +NCADN+GAKNLY I+ GIKG L++LPSA +GDM++
Sbjct: 5 RGRGGQVGTKAKVSLGLPVGAVMNCADNSGAKNLYTIACFGIKGHLSKLPSASIGDMILC 64
Query: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGK 109
+VKKG P LRKKV+ A+++RQR+PWRR+DGVF+YFE GS ITGP+ K
Sbjct: 65 SVKKGSPKLRKKVLQAIVIRQRRPWRRRDGVFIYFEDNAGVIANPKGEMKGSQITGPVAK 124
Query: 110 ECADLWPRIASAANAIV 126
ECAD+WP++AS A ++V
Sbjct: 125 ECADIWPKVASNAGSVV 141
>sp|Q94776|RL23_TRYCR 60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1
Length = 141
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 95/132 (71%), Gaps = 16/132 (12%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
G +FR+SL LPV A VNCADNTGAKNLYIISVKG GRLNRLP+A +GD+VMA+VKKGKP
Sbjct: 10 GCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKP 69
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFEGSA---------------ITGPIGKECA-DL 114
+LR+KV+ AVI+RQRK WRRKDG +YFE +A I GP+ KE
Sbjct: 70 ELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPS 129
Query: 115 WPRIASAANAIV 126
P+I+S A AIV
Sbjct: 130 GPKISSHAPAIV 141
>sp|A3DNB7|RL14_STAMF 50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1
Length = 140
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 93/140 (66%), Gaps = 14/140 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
M K+G+G A ++ R++ GL V + V ADN+GAK + II V G KGRL R+P A +GD+
Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDL 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
V+ TVKKG P++RK+V+ AVIVRQ++P+RR DG ++ FE GS I GP
Sbjct: 61 VVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGP 120
Query: 107 IGKECADLWPRIASAANAIV 126
I KE A+ WP++A+ A +V
Sbjct: 121 IAKEVAERWPQLANIATIVV 140
>sp|Q9HIR9|RL14_THEAC 50S ribosomal protein L14P OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 84/126 (66%), Gaps = 14/126 (11%)
Query: 15 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK 74
R + GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM MA+VKKG P++R
Sbjct: 7 RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRS 66
Query: 75 KVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIAS 120
KV+ AV++RQ++P+RR DG + FE GS I GP+ +E A+ WPRIA+
Sbjct: 67 KVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAA 126
Query: 121 AANAIV 126
A+ IV
Sbjct: 127 IASIIV 132
>sp|Q9YF82|RL14_AERPE 50S ribosomal protein L14P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl14p
PE=3 SV=1
Length = 140
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 91/140 (65%), Gaps = 14/140 (10%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
M+K+ + G +++ ++ GL V + V ADN+GAK + IISV +K RL RLPSA VGD+
Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDL 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
V+ +VKKG P +R++V+ AV+VRQR+P+RR DG ++ FE GS + GP
Sbjct: 61 VVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGP 120
Query: 107 IGKECADLWPRIASAANAIV 126
I +E A+ WPR+A A IV
Sbjct: 121 IAREAAERWPRVAKIATMIV 140
>sp|Q8SRA7|RL23_ENCCU 60S ribosomal protein L23 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL23 PE=3 SV=1
Length = 146
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 14/127 (11%)
Query: 13 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 72
+++M+ G+ V + CADN+GAK L I VK +GRLNRLP+A GD+ + +VKKGKP+L
Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPEL 78
Query: 73 RKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRI 118
RKKV A+++RQ+K WRR DG + FE G+ I GP+ +E AD+WP+I
Sbjct: 79 RKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPKI 138
Query: 119 ASAANAI 125
+S A++I
Sbjct: 139 SSQASSI 145
>sp|Q2NFW7|RL14_METST 50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl14p PE=3 SV=1
Length = 132
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 81/125 (64%), Gaps = 14/125 (11%)
Query: 16 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 75
+S LP+ A + C DNTGA+ + IISVKG KG RL SA VGDMV+ +VKKG D+R++
Sbjct: 8 VSKSLPIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRRE 67
Query: 76 VMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASA 121
V AV+VRQ+K +RR DG+ + FE GS I GPI KE ADLWP I SA
Sbjct: 68 VTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPIAKEAADLWPAIGSA 127
Query: 122 ANAIV 126
A+ IV
Sbjct: 128 ASIIV 132
>sp|Q8TW20|RL14_METKA 50S ribosomal protein L14P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl14p PE=3 SV=1
Length = 133
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 14/121 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LPV A + CADNTGA+ L II+VKG KG RLP+A +GDMV+ +VK+G PD+RK+V+ A
Sbjct: 13 LPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVNA 72
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
VIVRQRK +RR DG + FE GS I GP+ KE A+ WPRI S A+ I
Sbjct: 73 VIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAERWPRIGSIASII 132
Query: 126 V 126
V
Sbjct: 133 V 133
>sp|Q97BW6|RL14_THEVO 50S ribosomal protein L14P OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 17/133 (12%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G AG + R GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM +A+VKK
Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKK 59
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECAD 113
G P++R KV+ AV++RQ++P+RR DG + FE GS I GP+ +E A+
Sbjct: 60 GTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAE 119
Query: 114 LWPRIASAANAIV 126
WPRIA+ A+ IV
Sbjct: 120 RWPRIAAIASIIV 132
>sp|A2BMC9|RL14_HYPBU 50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl14p PE=3 SV=1
Length = 138
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 86/131 (65%), Gaps = 14/131 (10%)
Query: 10 AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGK 69
AG + ++ GL V + V ADN+GAK II V G KGRL R+P A VGDMV+ TVKKG
Sbjct: 8 AGPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGT 67
Query: 70 PDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLW 115
P++RK+V+ A+++RQR+P+RR DG ++ FE GS I GP+ +E A+ W
Sbjct: 68 PEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAERW 127
Query: 116 PRIASAANAIV 126
P++A+ A+ I+
Sbjct: 128 PKVANIASIII 138
>sp|Q6L1B7|RL14_PICTO 50S ribosomal protein L14P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl14p
PE=3 SV=1
Length = 132
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 14/126 (11%)
Query: 15 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK 74
R + GLP+ A + C DNTGAK + +I VK + R+P+A VGDM +A+VKKG P++R
Sbjct: 7 RETRGLPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRS 66
Query: 75 KVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIAS 120
KV+ AV+VRQR+P+RR DG + FE GS I GP+ +E A+ WPRIA+
Sbjct: 67 KVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAA 126
Query: 121 AANAIV 126
++ IV
Sbjct: 127 ISSTIV 132
>sp|O26121|RL14_METTH 50S ribosomal protein L14P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl14p PE=3 SV=1
Length = 132
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 14/126 (11%)
Query: 15 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK 74
+++ LPV A + C DNTGA+ + IISV+G KG RL +A VGDMV+ +VKKG D+R+
Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRR 66
Query: 75 KVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIAS 120
+V+ AVIVRQ+K +RR DG+ + FE GS I GP+ KE AD WP + S
Sbjct: 67 EVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRWPSVGS 126
Query: 121 AANAIV 126
AA+ IV
Sbjct: 127 AASIIV 132
>sp|A5UL78|RL14_METS3 50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1
Length = 132
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 81/125 (64%), Gaps = 14/125 (11%)
Query: 16 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 75
+S LP+ AT+ C DNTGA+ + IISVKG KG RL A VGD+V+A+VKKG D+R++
Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRRE 67
Query: 76 VMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASA 121
V+ AV++RQ+K + R DG+ + FE GS + GP+ KE AD WP + SA
Sbjct: 68 VVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWPSVGSA 127
Query: 122 ANAIV 126
A+ +V
Sbjct: 128 ASILV 132
>sp|Q8U009|RL14_PYRFU 50S ribosomal protein L14P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl14p PE=1 SV=1
Length = 141
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 15/141 (10%)
Query: 1 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
M+K+G G + G + R + LPV A + ADN+GAK + II V G RL SA VGD
Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGD 60
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITG 105
MV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FE G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 106 PIGKECADLWPRIASAANAIV 126
P+ +E A+ W RI S A+ IV
Sbjct: 121 PVAREAAERWVRIGSIASIIV 141
>sp|P54037|RL14_METJA 50S ribosomal protein L14P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 19 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMP 78
LPV A CADNTGAK + II+V+ KG RLP+A VGDMV+ TVKKG P++RK+V+P
Sbjct: 11 ALPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLP 70
Query: 79 AVIVRQRKPWRRKDGVFMYF--------------EGSAITGPIGKECADLWPRIASAANA 124
AV++RQRK RR DG + F +GS I GP+ KE A+ WP IA A
Sbjct: 71 AVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAERWPGIARIAKI 130
Query: 125 IV 126
I+
Sbjct: 131 II 132
>sp|A8ACD2|RL14_IGNH4 50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1
Length = 137
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 16/134 (11%)
Query: 9 SAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVK 66
++ NK R + GL V + V DN+GAK II V G GRL R+P A VGDMV+ TVK
Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVK 63
Query: 67 KGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECA 112
KG P++R +V+ A++VRQRKP+RR DG ++ FE GS I GP+ +E
Sbjct: 64 KGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAV 123
Query: 113 DLWPRIASAANAIV 126
+ WPRI + A+ +V
Sbjct: 124 ERWPRIGNVASIVV 137
>sp|B1L776|RL14_KORCO 50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl14p PE=3 SV=1
Length = 141
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 79/130 (60%), Gaps = 14/130 (10%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
G K +++ GLPV A + CADNTGAK L II V G KGR +R+P+A VGDMV VK+GK
Sbjct: 12 GVKPKITHGLPVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKY 71
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWP 116
DL K A++VRQR P+RRK+G ++ FE GS GPI KE + WP
Sbjct: 72 DLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPIAKEAIERWP 131
Query: 117 RIASAANAIV 126
++ + +V
Sbjct: 132 SLSVISAQVV 141
>sp|Q9V1U6|RL14_PYRAB 50S ribosomal protein L14P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl14p PE=3 SV=1
Length = 141
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 86/141 (60%), Gaps = 15/141 (10%)
Query: 1 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
M+K+G G + G R + +PV A + ADN+GAK + +I V G RL SA VGD
Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITG 105
MV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FE G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 106 PIGKECADLWPRIASAANAIV 126
P+ +E A+ W RI S A+ IV
Sbjct: 121 PVAREAAERWVRIGSIASIIV 141
>sp|O59427|RL14_PYRHO 50S ribosomal protein L14P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl14p PE=3 SV=2
Length = 141
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 15/141 (10%)
Query: 1 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
M+K+G G + G + R + +P+ A + ADN+GAK + +I V G RL SA VGD
Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITG 105
MV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FE G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 106 PIGKECADLWPRIASAANAIV 126
P+ +E A+ W RI S A+ IV
Sbjct: 121 PVAREAAEKWVRIGSIASIIV 141
>sp|A6UQ54|RL14_METVS 50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1
Length = 132
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 14/120 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
+I+RQ+K ++R DG + FE GS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
>sp|P14031|RL14_METVA 50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p
PE=3 SV=1
Length = 132
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 14/120 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
+I+RQ+K ++R DG + FE GS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
>sp|A6VGZ5|RL14_METM7 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl14p PE=3 SV=1
Length = 132
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L II+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
+I+RQ+K ++R DG + FE GS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|Q6LXE3|RL14_METMP 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl14p PE=3 SV=1
Length = 132
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
+I+RQ+K +RR DG + FE GS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|A0B9W0|RL14_METTP 50S ribosomal protein L14P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl14p PE=3 SV=1
Length = 132
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 14/130 (10%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
GNK ++ + + CADNTGA+ L+++SVK +G NR P A +GDMV+ +VKKG P
Sbjct: 3 GNKAKIPRSINTGTYLECADNTGARTLFVVSVKKYRGVKNRQPCAGIGDMVVVSVKKGTP 62
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWP 116
++RK++ AVI+RQ+K +RR DG+ + FE GS I GP+ +E A+ +
Sbjct: 63 EMRKQIFNAVIIRQKKEFRRPDGLRVKFEDNAAVITDDAGVPKGSEIKGPVAREVAERFG 122
Query: 117 RIASAANAIV 126
+IAS+A IV
Sbjct: 123 KIASSAAIIV 132
>sp|Q975J0|RL14_SULTO 50S ribosomal protein L14P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl14p PE=3 SV=2
Length = 138
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 14/130 (10%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
G++ ++ GL TV ADN+GAK II + G KG L R+P A + D+VM +V+KG P
Sbjct: 9 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTP 68
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWP 116
++RK+ AVIVRQR P+RR DG ++ FE G+ I GPI KE A+ WP
Sbjct: 69 EVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWP 128
Query: 117 RIASAANAIV 126
++AS A ++
Sbjct: 129 KVASIATMVI 138
>sp|A9A9Q4|RL14_METM6 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl14p PE=3 SV=1
Length = 132
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
+I+RQ+K ++R DG + FE GS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|A0RVY3|RL14_CENSY 50S ribosomal protein L14P OS=Cenarchaeum symbiosum (strain A)
GN=rpl14p PE=3 SV=1
Length = 144
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 17/140 (12%)
Query: 4 RGRGGSAG-NKFR--MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
R RG + G +FR ++ LPV A V CADN+GAK L II V+ K R++RLP+A VGD
Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDY 64
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGP 106
V VKKG +LRK+V AVI+RQ+ P RR +GV + FE G+ I GP
Sbjct: 65 VNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGP 124
Query: 107 IGKECADLWPRIASAANAIV 126
+ E ++ WPR+A+ A+ +V
Sbjct: 125 VAAEASEKWPRLANLASMVV 144
>sp|O24787|RL14_HALSA 50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl14p PE=3 SV=1
Length = 132
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 13 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 72
K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++
Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEM 64
Query: 73 RKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRI 118
R++V+ AV+VRQRKP RR DG + FE G+ I GPI +E A+ + I
Sbjct: 65 RRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTI 124
Query: 119 ASAANAIV 126
AS A IV
Sbjct: 125 ASTATMIV 132
>sp|B0R666|RL14_HALS3 50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1
Length = 132
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 13 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 72
K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++
Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEM 64
Query: 73 RKKVMPAVIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRI 118
R++V+ AV+VRQRKP RR DG + FE G+ I GPI +E A+ + I
Sbjct: 65 RRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTI 124
Query: 119 ASAANAIV 126
AS A IV
Sbjct: 125 ASTATMIV 132
>sp|O28364|RL14_ARCFU 50S ribosomal protein L14P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 14/121 (11%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGA+ L II+VKG KG R P+A VGD+V+ TVKKG P++RK+V A
Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYA 71
Query: 80 VIVRQRKPWRRKDGVFMYFE--------------GSAITGPIGKECADLWPRIASAANAI 125
VIVRQRK +RR DG + FE GS I G + +E A+ + +I + A+ I
Sbjct: 72 VIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVI 131
Query: 126 V 126
V
Sbjct: 132 V 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,033,567
Number of Sequences: 539616
Number of extensions: 1656756
Number of successful extensions: 5241
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 858
Number of HSP's that attempted gapping in prelim test: 4044
Number of HSP's gapped (non-prelim): 1017
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)