Query 033158
Match_columns 126
No_of_seqs 132 out of 533
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 17:18:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l57_A Uncharacterized protein 94.4 0.21 7E-06 33.0 7.4 62 55-118 29-95 (126)
2 3uvt_A Thioredoxin domain-cont 93.9 0.27 9.3E-06 31.1 7.0 62 55-118 24-90 (111)
3 1thx_A Thioredoxin, thioredoxi 92.9 0.31 1.1E-05 31.0 6.0 62 55-118 28-91 (115)
4 2xc2_A Thioredoxinn; oxidoredu 92.8 0.48 1.6E-05 30.7 6.9 62 55-118 36-97 (117)
5 1t00_A Thioredoxin, TRX; redox 92.7 0.29 1E-05 31.2 5.7 62 55-118 26-89 (112)
6 1fb6_A Thioredoxin M; electron 92.6 0.61 2.1E-05 29.0 7.0 62 55-118 21-84 (105)
7 1w4v_A Thioredoxin, mitochondr 92.5 0.31 1.1E-05 32.0 5.7 62 55-118 34-97 (119)
8 1nsw_A Thioredoxin, TRX; therm 92.4 0.33 1.1E-05 30.5 5.5 62 55-118 20-83 (105)
9 3d6i_A Monothiol glutaredoxin- 92.3 0.51 1.8E-05 30.1 6.5 62 55-118 24-88 (112)
10 1dby_A Chloroplast thioredoxin 92.3 0.26 8.9E-06 31.1 5.0 62 55-118 22-85 (107)
11 2i1u_A Thioredoxin, TRX, MPT46 92.1 0.38 1.3E-05 31.0 5.6 62 55-118 33-96 (121)
12 1fo5_A Thioredoxin; disulfide 92.0 0.074 2.5E-06 32.4 2.0 59 55-117 5-65 (85)
13 2i4a_A Thioredoxin; acidophIle 92.0 0.3 1E-05 30.6 5.0 61 56-118 24-86 (107)
14 3die_A Thioredoxin, TRX; elect 91.9 0.29 9.9E-06 30.7 4.8 62 55-118 22-85 (106)
15 2l6c_A Thioredoxin; oxidoreduc 91.9 0.6 2.1E-05 30.2 6.5 62 55-118 22-84 (110)
16 3emx_A Thioredoxin; structural 91.9 0.48 1.7E-05 32.0 6.2 62 55-118 34-104 (135)
17 1nho_A Probable thioredoxin; b 91.7 0.07 2.4E-06 32.5 1.6 59 55-117 4-64 (85)
18 2trx_A Thioredoxin; electron t 91.7 0.32 1.1E-05 30.7 4.8 61 56-118 24-86 (108)
19 3tco_A Thioredoxin (TRXA-1); d 91.6 0.37 1.3E-05 30.2 5.1 61 56-118 25-87 (109)
20 2djk_A PDI, protein disulfide- 91.6 0.46 1.6E-05 32.2 5.9 59 59-118 30-92 (133)
21 2vim_A Thioredoxin, TRX; thior 91.4 0.48 1.6E-05 29.5 5.4 62 55-118 22-84 (104)
22 3qfa_C Thioredoxin; protein-pr 91.2 0.84 2.9E-05 29.9 6.7 62 55-118 34-96 (116)
23 1x5d_A Protein disulfide-isome 91.1 0.28 9.6E-06 32.2 4.2 60 56-117 29-94 (133)
24 1xwb_A Thioredoxin; dimerizati 91.1 0.53 1.8E-05 29.4 5.4 62 55-118 23-86 (106)
25 3gnj_A Thioredoxin domain prot 91.0 0.56 1.9E-05 29.6 5.5 62 55-118 25-88 (111)
26 3m9j_A Thioredoxin; oxidoreduc 91.0 0.57 2E-05 29.3 5.5 62 55-118 23-85 (105)
27 1gh2_A Thioredoxin-like protei 90.8 0.59 2E-05 29.7 5.5 62 55-118 24-86 (107)
28 1syr_A Thioredoxin; SGPP, stru 90.7 0.54 1.8E-05 30.3 5.3 61 56-118 30-91 (112)
29 1ep7_A Thioredoxin CH1, H-type 90.6 0.55 1.9E-05 29.8 5.2 62 55-118 27-90 (112)
30 1ti3_A Thioredoxin H, PTTRXH1; 90.4 0.4 1.4E-05 30.4 4.4 61 56-118 30-91 (113)
31 2vlu_A Thioredoxin, thioredoxi 90.3 0.68 2.3E-05 30.0 5.6 62 55-118 37-99 (122)
32 2e0q_A Thioredoxin; electron t 90.3 0.6 2E-05 28.8 5.1 61 56-118 20-81 (104)
33 3msz_A Glutaredoxin 1; alpha-b 90.3 1.1 3.7E-05 27.5 6.2 46 55-102 5-54 (89)
34 1wjk_A C330018D20RIK protein; 90.2 0.5 1.7E-05 31.0 4.9 47 55-101 18-64 (100)
35 2yzu_A Thioredoxin; redox prot 90.2 0.68 2.3E-05 28.8 5.3 61 56-118 22-84 (109)
36 2wz9_A Glutaredoxin-3; protein 90.1 0.63 2.2E-05 32.1 5.5 62 55-118 35-97 (153)
37 2vm1_A Thioredoxin, thioredoxi 89.9 0.71 2.4E-05 29.4 5.3 62 55-118 31-93 (118)
38 3f3q_A Thioredoxin-1; His TAG, 89.9 0.75 2.6E-05 29.7 5.4 61 56-118 28-89 (109)
39 3h79_A Thioredoxin-like protei 89.9 1.6 5.4E-05 28.7 7.2 59 56-116 37-102 (127)
40 2j23_A Thioredoxin; immune pro 89.8 1.2 4.2E-05 29.2 6.6 62 55-118 36-100 (121)
41 1xfl_A Thioredoxin H1; AT3G510 89.7 0.8 2.7E-05 30.5 5.6 61 56-118 42-103 (124)
42 2dj1_A Protein disulfide-isome 89.7 0.79 2.7E-05 30.4 5.6 60 56-117 38-102 (140)
43 3ul3_B Thioredoxin, thioredoxi 89.7 0.72 2.5E-05 30.6 5.3 61 56-118 46-108 (128)
44 2voc_A Thioredoxin; electron t 89.6 0.41 1.4E-05 31.0 4.0 62 55-118 20-83 (112)
45 1kng_A Thiol:disulfide interch 89.0 0.91 3.1E-05 30.3 5.5 36 54-89 44-79 (156)
46 2e7p_A Glutaredoxin; thioredox 88.7 0.93 3.2E-05 29.3 5.3 46 55-102 21-71 (116)
47 3p2a_A Thioredoxin 2, putative 88.5 1 3.5E-05 30.4 5.6 61 56-118 59-121 (148)
48 3cxg_A Putative thioredoxin; m 88.3 1 3.5E-05 30.4 5.4 61 55-117 43-105 (133)
49 1v98_A Thioredoxin; oxidoreduc 88.3 1.1 3.8E-05 30.0 5.6 61 56-118 54-116 (140)
50 2o8v_B Thioredoxin 1; disulfid 88.2 0.44 1.5E-05 32.1 3.5 61 56-118 44-106 (128)
51 2ppt_A Thioredoxin-2; thiredox 88.2 0.94 3.2E-05 31.6 5.3 62 55-118 67-130 (155)
52 4euy_A Uncharacterized protein 88.1 0.81 2.8E-05 29.1 4.6 61 56-118 22-83 (105)
53 1a8l_A Protein disulfide oxido 87.9 3.2 0.00011 29.7 8.2 59 56-116 26-88 (226)
54 2l5l_A Thioredoxin; structural 87.8 1.9 6.5E-05 28.8 6.5 62 55-118 41-105 (136)
55 3gv1_A Disulfide interchange p 87.5 0.51 1.8E-05 33.6 3.6 23 55-77 17-39 (147)
56 1mek_A Protein disulfide isome 87.5 0.3 1E-05 31.1 2.2 60 56-117 28-92 (120)
57 2dml_A Protein disulfide-isome 87.3 1.5 5.1E-05 28.6 5.6 60 55-116 38-99 (130)
58 1r26_A Thioredoxin; redox-acti 87.3 1 3.6E-05 30.2 5.0 62 55-118 40-102 (125)
59 3aps_A DNAJ homolog subfamily 87.3 1.1 3.7E-05 29.0 4.9 58 55-114 24-83 (122)
60 3l9s_A Thiol:disulfide interch 87.3 1.4 4.8E-05 32.1 6.0 51 36-88 7-64 (191)
61 2oe3_A Thioredoxin-3; electron 87.2 0.92 3.2E-05 29.7 4.5 61 56-118 34-95 (114)
62 2lrn_A Thiol:disulfide interch 87.1 2.7 9.2E-05 28.2 7.0 62 55-118 32-122 (152)
63 1x5e_A Thioredoxin domain cont 87.0 1.1 3.8E-05 29.3 4.9 62 55-118 25-89 (126)
64 3hxs_A Thioredoxin, TRXP; elec 87.0 1.9 6.5E-05 28.6 6.1 61 55-117 54-117 (141)
65 1zma_A Bacterocin transport ac 86.5 1.7 5.8E-05 28.1 5.5 62 55-118 32-99 (118)
66 3uem_A Protein disulfide-isome 86.3 2.1 7.1E-05 33.3 6.8 59 57-115 140-202 (361)
67 2k8s_A Thioredoxin; dimer, str 85.8 1.9 6.6E-05 26.4 5.3 48 55-102 3-53 (80)
68 1faa_A Thioredoxin F; electron 85.6 1.8 6.1E-05 28.1 5.3 62 55-118 40-103 (124)
69 3hz4_A Thioredoxin; NYSGXRC, P 85.5 1.9 6.3E-05 29.1 5.5 62 55-118 27-90 (140)
70 3zzx_A Thioredoxin; oxidoreduc 85.2 2.4 8.2E-05 27.9 5.8 58 59-118 27-85 (105)
71 2f51_A Thioredoxin; electron t 85.2 1.4 4.8E-05 28.9 4.6 59 55-115 26-85 (118)
72 3ga4_A Dolichyl-diphosphooligo 85.0 1.8 6.3E-05 32.1 5.7 60 56-117 40-114 (178)
73 1h75_A Glutaredoxin-like prote 84.8 3.1 0.00011 25.1 5.9 46 55-102 2-48 (81)
74 2pu9_C TRX-F, thioredoxin F-ty 84.7 1.7 6E-05 27.5 4.8 62 55-118 27-90 (111)
75 3fkf_A Thiol-disulfide oxidore 84.4 2.4 8.2E-05 27.7 5.5 34 55-88 36-73 (148)
76 3tdg_A DSBG, putative uncharac 84.3 0.43 1.5E-05 38.2 2.0 35 53-87 148-182 (273)
77 1a8l_A Protein disulfide oxido 84.1 2.7 9.2E-05 30.1 6.1 60 56-117 138-203 (226)
78 3d22_A TRXH4, thioredoxin H-ty 83.9 1.8 6.1E-05 28.7 4.8 62 55-118 49-111 (139)
79 2yj7_A LPBCA thioredoxin; oxid 84.2 0.22 7.4E-06 31.0 0.0 62 55-118 22-85 (106)
80 1v58_A Thiol:disulfide interch 83.6 0.74 2.5E-05 34.8 3.0 31 55-85 100-130 (241)
81 2rem_A Disulfide oxidoreductas 83.6 1.8 6.2E-05 30.4 5.0 50 37-88 7-65 (193)
82 3raz_A Thioredoxin-related pro 83.5 4 0.00014 27.3 6.5 35 55-89 27-64 (151)
83 3ha9_A Uncharacterized thiored 83.1 3.7 0.00013 27.8 6.2 35 55-89 40-75 (165)
84 1lu4_A Soluble secreted antige 82.8 2 7E-05 27.7 4.6 36 54-89 26-62 (136)
85 2es7_A Q8ZP25_salty, putative 82.8 1.6 5.6E-05 30.5 4.4 63 54-118 35-103 (142)
86 2dj3_A Protein disulfide-isome 82.4 0.89 3E-05 29.9 2.7 59 56-116 29-91 (133)
87 3ipz_A Monothiol glutaredoxin- 82.2 3.5 0.00012 27.3 5.7 43 55-99 18-67 (109)
88 2fgx_A Putative thioredoxin; N 82.1 1.2 4E-05 30.5 3.3 58 55-117 31-90 (107)
89 1r7h_A NRDH-redoxin; thioredox 82.0 4.7 0.00016 23.6 5.7 46 55-102 2-48 (75)
90 3ia1_A THIO-disulfide isomeras 81.5 1.1 3.8E-05 30.0 3.0 34 55-88 33-68 (154)
91 2lja_A Putative thiol-disulfid 81.4 3.2 0.00011 27.5 5.3 35 55-89 33-70 (152)
92 2ju5_A Thioredoxin disulfide i 80.8 0.73 2.5E-05 31.9 1.9 91 24-118 16-129 (154)
93 3apq_A DNAJ homolog subfamily 80.7 2.7 9.4E-05 30.3 5.1 62 55-118 117-180 (210)
94 2dj0_A Thioredoxin-related tra 80.7 1.7 5.9E-05 29.0 3.7 63 56-118 30-99 (137)
95 1zzo_A RV1677; thioredoxin fol 80.4 2.9 9.8E-05 26.7 4.6 36 54-89 27-63 (136)
96 1aba_A Glutaredoxin; electron 80.3 5.2 0.00018 24.9 5.8 31 57-89 3-37 (87)
97 3hdc_A Thioredoxin family prot 80.0 5.1 0.00017 27.0 6.0 62 55-118 44-128 (158)
98 4dvc_A Thiol:disulfide interch 79.7 3.9 0.00013 28.1 5.4 50 37-88 8-61 (184)
99 3erw_A Sporulation thiol-disul 79.7 2.3 7.8E-05 27.6 4.0 36 55-90 37-75 (145)
100 3h93_A Thiol:disulfide interch 79.4 2.5 8.5E-05 29.9 4.4 32 55-86 28-61 (192)
101 3gyk_A 27KDA outer membrane pr 79.1 1.5 5E-05 30.5 3.0 33 55-87 25-60 (175)
102 3gx8_A Monothiol glutaredoxin- 78.8 5.3 0.00018 27.2 5.8 45 55-99 16-68 (121)
103 1fov_A Glutaredoxin 3, GRX3; a 78.5 4.8 0.00016 24.1 5.0 45 55-101 2-48 (82)
104 1z6m_A Conserved hypothetical 78.0 2.2 7.5E-05 29.7 3.7 34 55-88 30-69 (175)
105 2b5x_A YKUV protein, TRXY; thi 77.8 4 0.00014 26.5 4.8 36 54-89 31-68 (148)
106 1o73_A Tryparedoxin; electron 77.2 12 0.00041 24.4 7.1 62 55-118 31-122 (144)
107 3ic4_A Glutaredoxin (GRX-1); s 76.8 8.5 0.00029 23.7 6.0 33 55-89 13-45 (92)
108 2b1k_A Thiol:disulfide interch 76.8 2 6.9E-05 29.3 3.2 33 55-88 54-86 (168)
109 2fwh_A Thiol:disulfide interch 76.6 11 0.00037 24.9 6.8 60 55-118 34-104 (134)
110 2wem_A Glutaredoxin-related pr 76.1 5.7 0.00019 27.2 5.3 44 55-99 20-70 (118)
111 2klx_A Glutaredoxin; thioredox 75.4 6 0.00021 24.5 4.9 44 55-100 7-50 (89)
112 4evm_A Thioredoxin family prot 75.3 8.2 0.00028 24.3 5.7 34 55-88 25-60 (138)
113 1kte_A Thioltransferase; redox 74.9 10 0.00035 23.9 6.1 37 54-90 12-49 (105)
114 1i5g_A Tryparedoxin II; electr 74.1 9 0.00031 25.2 5.8 62 55-118 31-122 (144)
115 3fk8_A Disulphide isomerase; A 74.0 2.6 9.1E-05 27.6 3.1 63 56-118 33-104 (133)
116 3or5_A Thiol:disulfide interch 74.0 9.1 0.00031 25.4 5.9 35 55-89 37-74 (165)
117 1eej_A Thiol:disulfide interch 74.0 1.4 4.9E-05 32.4 1.9 32 55-86 89-121 (216)
118 2ywm_A Glutaredoxin-like prote 73.9 3.9 0.00013 29.5 4.2 56 58-117 142-198 (229)
119 3idv_A Protein disulfide-isome 73.5 10 0.00035 27.0 6.4 60 56-117 36-100 (241)
120 3dxb_A Thioredoxin N-terminall 73.5 6.2 0.00021 28.7 5.3 61 56-118 34-96 (222)
121 2znm_A Thiol:disulfide interch 73.0 1.7 5.7E-05 30.8 2.0 40 37-76 5-46 (195)
122 1r4w_A Glutathione S-transfera 73.0 4 0.00014 30.0 4.1 35 55-89 7-43 (226)
123 3idv_A Protein disulfide-isome 72.9 8.8 0.0003 27.4 5.9 61 56-118 151-216 (241)
124 1wik_A Thioredoxin-like protei 72.8 6 0.00021 25.9 4.6 34 55-90 16-54 (109)
125 1qgv_A Spliceosomal protein U5 72.8 3.8 0.00013 28.0 3.8 61 56-118 27-89 (142)
126 3bci_A Disulfide bond protein 72.5 4.3 0.00015 28.5 4.1 21 54-74 13-33 (186)
127 1t3b_A Thiol:disulfide interch 72.4 1.6 5.6E-05 32.1 1.9 32 55-86 89-121 (211)
128 3gmf_A Protein-disulfide isome 72.2 4.2 0.00014 30.1 4.1 32 55-86 18-54 (205)
129 2ywm_A Glutaredoxin-like prote 72.1 8.9 0.0003 27.5 5.8 58 57-116 25-91 (229)
130 2kuc_A Putative disulphide-iso 72.0 3.1 0.00011 27.0 3.0 62 55-118 30-99 (130)
131 3kcm_A Thioredoxin family prot 71.7 11 0.00036 24.9 5.7 34 55-88 31-67 (154)
132 2qgv_A Hydrogenase-1 operon pr 71.6 18 0.00063 25.7 7.3 53 64-118 48-103 (140)
133 3c7m_A Thiol:disulfide interch 71.4 8.6 0.00029 26.7 5.4 37 37-74 3-39 (195)
134 2wul_A Glutaredoxin related pr 71.3 7.6 0.00026 27.0 5.0 43 56-99 21-70 (118)
135 2lrt_A Uncharacterized protein 70.6 6.6 0.00022 26.6 4.6 35 55-89 38-75 (152)
136 1o8x_A Tryparedoxin, TRYX, TXN 70.4 20 0.00068 23.5 7.7 62 55-118 31-122 (146)
137 2trc_P Phosducin, MEKA, PP33; 70.4 7.7 0.00026 28.9 5.3 61 55-118 123-184 (217)
138 3gl3_A Putative thiol:disulfid 70.3 6.5 0.00022 25.9 4.4 34 55-88 31-67 (152)
139 3l9v_A Putative thiol-disulfid 70.3 7.8 0.00027 27.7 5.1 21 53-73 15-35 (189)
140 3zyw_A Glutaredoxin-3; metal b 70.2 9.6 0.00033 25.4 5.3 43 55-99 16-65 (111)
141 3qou_A Protein YBBN; thioredox 70.0 5.6 0.00019 29.7 4.4 61 56-118 30-92 (287)
142 2in3_A Hypothetical protein; D 69.1 3.6 0.00012 29.5 3.1 34 55-88 9-46 (216)
143 3s9f_A Tryparedoxin; thioredox 69.0 22 0.00077 24.3 7.2 61 56-118 52-142 (165)
144 2yan_A Glutaredoxin-3; oxidore 69.0 8.2 0.00028 24.9 4.6 34 55-90 18-56 (105)
145 4f9z_D Endoplasmic reticulum r 68.8 18 0.00062 26.3 7.0 56 59-114 138-197 (227)
146 1jfu_A Thiol:disulfide interch 68.7 5.9 0.0002 27.4 4.0 49 55-103 63-119 (186)
147 2l5o_A Putative thioredoxin; s 68.5 6 0.00021 26.1 3.9 34 55-88 31-67 (153)
148 3hd5_A Thiol:disulfide interch 68.5 4.1 0.00014 28.8 3.2 24 55-78 28-51 (195)
149 3fw2_A Thiol-disulfide oxidore 68.2 22 0.00076 23.4 6.8 34 55-88 36-75 (150)
150 1ttz_A Conserved hypothetical 68.0 12 0.0004 24.0 5.1 56 55-117 2-57 (87)
151 1wmj_A Thioredoxin H-type; str 67.7 0.9 3.1E-05 29.5 -0.4 62 55-118 39-101 (130)
152 2khp_A Glutaredoxin; thioredox 67.6 8.3 0.00028 23.8 4.3 45 55-101 7-53 (92)
153 1ego_A Glutaredoxin; electron 67.6 3.9 0.00013 24.7 2.6 46 56-101 3-53 (85)
154 1ilo_A Conserved hypothetical 67.4 14 0.00047 21.5 5.1 44 56-102 3-48 (77)
155 3iv4_A Putative oxidoreductase 66.9 24 0.00081 24.4 6.8 61 57-118 28-93 (112)
156 3hcz_A Possible thiol-disulfid 66.5 4.4 0.00015 26.4 2.8 34 55-88 34-70 (148)
157 3kh7_A Thiol:disulfide interch 66.3 8.9 0.0003 26.7 4.6 34 55-89 61-94 (176)
158 2cq9_A GLRX2 protein, glutared 66.3 8.4 0.00029 26.1 4.4 34 55-90 28-61 (130)
159 3lwa_A Secreted thiol-disulfid 66.2 16 0.00054 25.1 5.9 48 55-102 62-123 (183)
160 3hz8_A Thiol:disulfide interch 66.1 6.3 0.00022 28.3 3.9 32 55-86 27-60 (193)
161 2hze_A Glutaredoxin-1; thiored 65.4 14 0.00048 24.1 5.3 50 53-102 18-73 (114)
162 3gix_A Thioredoxin-like protei 65.4 21 0.00072 24.4 6.4 61 56-118 27-89 (149)
163 3gn3_A Putative protein-disulf 63.6 7.1 0.00024 28.3 3.7 19 55-73 17-35 (182)
164 3qmx_A Glutaredoxin A, glutare 63.4 18 0.0006 23.5 5.4 41 55-97 17-58 (99)
165 1oaz_A Thioredoxin 1; immune s 63.4 5.8 0.0002 26.2 3.0 61 56-118 25-101 (123)
166 1wou_A Thioredoxin -related pr 63.1 9.1 0.00031 25.0 3.9 59 56-116 28-102 (123)
167 3gha_A Disulfide bond formatio 63.1 6.8 0.00023 28.6 3.6 18 55-72 32-49 (202)
168 4fo5_A Thioredoxin-like protei 62.6 20 0.00068 23.4 5.7 34 55-88 35-71 (143)
169 3kzq_A Putative uncharacterize 62.2 9.1 0.00031 27.5 4.1 34 55-88 4-41 (208)
170 3q6o_A Sulfhydryl oxidase 1; p 62.0 16 0.00054 26.7 5.5 58 56-115 34-98 (244)
171 2ywi_A Hypothetical conserved 61.9 6.6 0.00023 27.3 3.2 35 55-89 49-86 (196)
172 3dml_A Putative uncharacterize 61.4 7.2 0.00025 26.9 3.3 62 55-118 21-88 (116)
173 3drn_A Peroxiredoxin, bacterio 60.9 14 0.00047 25.1 4.7 33 56-88 33-69 (161)
174 1z3e_A Regulatory protein SPX; 60.8 28 0.00096 23.7 6.3 33 56-90 3-35 (132)
175 3ewl_A Uncharacterized conserv 60.6 5.1 0.00018 26.2 2.3 34 55-88 30-69 (142)
176 3eyt_A Uncharacterized protein 60.4 8.8 0.0003 25.5 3.5 34 56-89 32-69 (158)
177 2hls_A Protein disulfide oxido 59.5 21 0.00071 26.6 5.8 56 56-113 29-93 (243)
178 3lor_A Thiol-disulfide isomera 59.3 22 0.00076 23.4 5.4 34 56-89 34-71 (160)
179 2wci_A Glutaredoxin-4; redox-a 58.8 19 0.00065 25.1 5.2 34 63-98 49-83 (135)
180 3rhb_A ATGRXC5, glutaredoxin-C 57.8 25 0.00087 22.6 5.4 34 55-90 20-53 (113)
181 2imf_A HCCA isomerase, 2-hydro 57.8 6.5 0.00022 28.2 2.6 35 55-89 2-38 (203)
182 2cvb_A Probable thiol-disulfid 57.0 7.8 0.00027 26.9 2.9 36 55-90 36-73 (188)
183 2r2j_A Thioredoxin domain-cont 57.0 22 0.00074 28.1 5.8 60 56-117 26-93 (382)
184 1xvq_A Thiol peroxidase; thior 54.4 7.7 0.00026 27.0 2.5 33 56-88 48-81 (175)
185 3ed3_A Protein disulfide-isome 54.0 55 0.0019 25.1 7.6 60 56-117 39-102 (298)
186 3feu_A Putative lipoprotein; a 53.7 14 0.00048 26.4 3.9 51 38-88 8-60 (185)
187 3rpp_A Glutathione S-transfera 53.7 15 0.00051 27.4 4.1 35 54-88 6-42 (234)
188 2b5e_A Protein disulfide-isome 53.5 21 0.00072 29.0 5.3 60 56-117 35-97 (504)
189 2ht9_A Glutaredoxin-2; thiored 53.5 19 0.00065 25.2 4.4 34 55-90 50-83 (146)
190 2lqo_A Putative glutaredoxin R 52.7 44 0.0015 21.6 6.5 43 55-99 5-48 (92)
191 1t1v_A SH3BGRL3, SH3 domain-bi 52.6 26 0.00088 21.9 4.7 45 55-101 3-55 (93)
192 2k6v_A Putative cytochrome C o 52.6 30 0.001 23.0 5.2 35 55-89 38-79 (172)
193 2yzh_A Probable thiol peroxida 52.5 29 0.00098 23.6 5.2 42 61-102 57-102 (171)
194 3l78_A Regulatory protein SPX; 52.3 25 0.00085 23.8 4.8 47 56-104 2-53 (120)
195 2obi_A PHGPX, GPX-4, phospholi 52.2 16 0.00055 25.3 3.9 34 55-88 50-86 (183)
196 3fz4_A Putative arsenate reduc 52.0 43 0.0015 22.6 6.0 50 55-106 4-58 (120)
197 3c1r_A Glutaredoxin-1; oxidize 51.7 26 0.00089 23.2 4.8 36 55-90 26-63 (118)
198 2vup_A Glutathione peroxidase- 51.5 15 0.00052 25.7 3.7 37 52-88 48-87 (190)
199 3nzn_A Glutaredoxin; structura 51.2 13 0.00046 23.7 3.1 34 55-90 23-56 (103)
200 2h30_A Thioredoxin, peptide me 51.2 15 0.0005 24.4 3.4 25 54-78 40-64 (164)
201 3fz5_A Possible 2-hydroxychrom 50.9 11 0.00037 27.2 2.9 36 54-89 5-42 (202)
202 1a0r_P Phosducin, MEKA, PP33; 50.9 16 0.00054 28.1 4.0 60 56-118 137-197 (245)
203 2k9u_B Filamin-binding LIM pro 50.8 15 0.00051 19.6 2.6 18 22-39 8-25 (26)
204 3f4s_A Alpha-DSBA1, putative u 50.4 9.2 0.00031 28.7 2.5 18 55-72 42-59 (226)
205 2ct6_A SH3 domain-binding glut 50.0 51 0.0017 21.5 6.1 43 55-99 9-58 (111)
206 3u5r_E Uncharacterized protein 49.9 17 0.00058 26.3 3.8 36 55-90 62-100 (218)
207 2hls_A Protein disulfide oxido 49.8 17 0.00058 27.1 3.9 47 56-102 142-194 (243)
208 3apo_A DNAJ homolog subfamily 49.3 28 0.00095 30.0 5.7 60 56-117 459-520 (780)
209 1nm3_A Protein HI0572; hybrid, 49.2 33 0.0011 24.9 5.4 47 53-101 169-216 (241)
210 3f8u_A Protein disulfide-isome 49.2 24 0.00082 28.3 5.0 60 56-117 25-86 (481)
211 2f9s_A Thiol-disulfide oxidore 49.1 12 0.00042 24.6 2.7 34 55-88 29-65 (151)
212 3gkx_A Putative ARSC family re 48.9 36 0.0012 23.1 5.2 50 55-106 5-59 (120)
213 1psq_A Probable thiol peroxida 48.2 49 0.0017 22.3 5.9 42 61-102 52-97 (163)
214 3ctg_A Glutaredoxin-2; reduced 48.1 32 0.0011 23.3 4.8 36 55-90 38-75 (129)
215 1xvw_A Hypothetical protein RV 46.4 30 0.001 22.9 4.4 32 57-88 41-76 (160)
216 2p5q_A Glutathione peroxidase 46.3 25 0.00086 23.4 4.0 35 55-89 35-72 (170)
217 1hyu_A AHPF, alkyl hydroperoxi 46.1 18 0.00061 30.0 3.8 48 55-102 120-168 (521)
218 1sji_A Calsequestrin 2, calseq 45.1 36 0.0012 26.3 5.3 58 56-117 32-100 (350)
219 2gs3_A PHGPX, GPX-4, phospholi 44.8 30 0.001 24.0 4.4 49 55-103 52-114 (185)
220 3apo_A DNAJ homolog subfamily 44.7 28 0.00094 30.0 4.9 60 56-117 679-740 (780)
221 3h8q_A Thioredoxin reductase 3 44.3 19 0.00063 23.7 3.0 33 55-89 18-50 (114)
222 2lst_A Thioredoxin; structural 50.1 4.8 0.00016 26.2 0.0 61 56-118 23-92 (130)
223 2lus_A Thioredoxion; CR-Trp16, 49.3 5 0.00017 26.1 0.0 23 55-77 29-51 (143)
224 3ppu_A Glutathione-S-transfera 42.8 41 0.0014 27.0 5.4 47 42-88 64-110 (352)
225 2dbc_A PDCL2, unnamed protein 42.2 24 0.00083 23.4 3.4 58 56-118 34-92 (135)
226 3p7x_A Probable thiol peroxida 42.1 42 0.0014 22.7 4.7 42 61-102 56-100 (166)
227 2p31_A CL683, glutathione pero 41.9 22 0.00075 24.6 3.3 34 55-88 52-88 (181)
228 2qsi_A Putative hydrogenase ex 40.7 93 0.0032 21.9 7.1 61 56-118 36-101 (137)
229 3eur_A Uncharacterized protein 39.7 20 0.00069 23.4 2.6 35 55-89 34-74 (142)
230 3kij_A Probable glutathione pe 39.7 64 0.0022 22.1 5.4 33 56-88 42-77 (180)
231 1xzo_A BSSCO, hypothetical pro 39.5 46 0.0016 22.2 4.6 52 52-103 33-97 (174)
232 3rdw_A Putative arsenate reduc 38.7 46 0.0016 22.5 4.5 48 56-105 7-60 (121)
233 1z6n_A Hypothetical protein PA 37.5 67 0.0023 22.7 5.3 63 56-118 58-123 (167)
234 2kok_A Arsenate reductase; bru 37.3 78 0.0027 21.0 5.4 44 56-101 7-55 (120)
235 1rw1_A Conserved hypothetical 37.0 58 0.002 21.5 4.7 44 56-101 2-50 (114)
236 3ixr_A Bacterioferritin comigr 36.3 91 0.0031 21.5 5.8 17 61-77 61-77 (179)
237 2a4v_A Peroxiredoxin DOT5; yea 35.7 88 0.003 20.7 5.5 31 61-91 45-79 (159)
238 4f03_A Glutathione transferase 35.1 1.2E+02 0.004 21.4 6.4 46 55-102 3-58 (253)
239 3gl5_A Putative DSBA oxidoredu 34.8 28 0.00094 26.1 3.0 34 55-88 4-43 (239)
240 1un2_A DSBA, thiol-disulfide i 32.9 30 0.001 25.2 2.9 22 53-74 114-135 (197)
241 3qcp_A QSOX from trypanosoma b 32.6 75 0.0025 26.9 5.6 57 56-114 46-112 (470)
242 2r2j_A Thioredoxin domain-cont 32.5 1.4E+02 0.0048 23.2 7.0 59 56-114 240-301 (382)
243 3evi_A Phosducin-like protein 32.0 68 0.0023 21.3 4.4 57 57-118 28-85 (118)
244 3f0i_A Arsenate reductase; str 31.7 61 0.0021 21.8 4.1 47 55-103 5-56 (119)
245 2ggt_A SCO1 protein homolog, m 29.6 70 0.0024 20.9 4.1 22 56-77 27-49 (164)
246 2djj_A PDI, protein disulfide- 28.6 59 0.002 20.2 3.4 57 55-116 28-91 (121)
247 3bj5_A Protein disulfide-isome 28.3 88 0.003 21.5 4.6 37 78-114 60-98 (147)
248 2v1m_A Glutathione peroxidase; 28.0 47 0.0016 21.9 3.0 35 55-89 34-71 (169)
249 1ews_A RK-1 defensin, alpha-de 27.8 15 0.00051 20.2 0.3 14 55-68 10-23 (32)
250 3n1s_A HIT-like protein HINT; 27.6 29 0.001 23.2 1.9 9 60-68 1-9 (119)
251 1dt9_A ERF1, protein (eukaryot 27.5 59 0.002 26.8 4.0 39 63-101 358-407 (437)
252 2js3_A Uncharacterized protein 27.4 1.1 3.9E-05 30.5 -5.3 19 61-79 49-71 (96)
253 1q98_A Thiol peroxidase, TPX; 27.4 40 0.0014 22.9 2.6 28 61-88 53-81 (165)
254 2qc7_A ERP31, ERP28, endoplasm 27.1 2E+02 0.0068 21.6 6.7 62 56-117 25-94 (240)
255 3a2v_A Probable peroxiredoxin; 27.1 1.6E+02 0.0054 22.3 6.2 24 54-77 33-59 (249)
256 3f9u_A Putative exported cytoc 26.8 63 0.0021 21.8 3.5 15 56-70 51-65 (172)
257 3uma_A Hypothetical peroxiredo 26.7 1.7E+02 0.0058 20.7 6.6 43 61-103 66-116 (184)
258 2jsy_A Probable thiol peroxida 26.6 28 0.00097 23.4 1.7 23 55-77 47-70 (167)
259 2wfc_A Peroxiredoxin 5, PRDX5; 26.5 1.6E+02 0.0054 20.3 5.7 43 61-103 41-91 (167)
260 2rli_A SCO2 protein homolog, m 26.4 1E+02 0.0036 20.2 4.6 33 56-88 30-70 (171)
261 2x8g_A Thioredoxin glutathione 26.2 98 0.0033 25.7 5.2 35 54-90 18-52 (598)
262 1n8j_A AHPC, alkyl hydroperoxi 26.1 1.5E+02 0.005 20.6 5.5 39 62-100 41-85 (186)
263 1sen_A Thioredoxin-like protei 25.9 62 0.0021 22.2 3.4 62 56-118 50-116 (164)
264 3us3_A Calsequestrin-1; calciu 25.9 2.3E+02 0.008 22.0 7.2 61 56-118 34-103 (367)
265 3cmi_A Peroxiredoxin HYR1; thi 25.1 55 0.0019 22.1 3.0 33 55-88 35-70 (171)
266 2ls5_A Uncharacterized protein 29.8 16 0.00056 24.3 0.0 35 55-89 36-75 (159)
267 3l4n_A Monothiol glutaredoxin- 24.0 66 0.0023 22.0 3.2 36 55-90 15-51 (127)
268 3kp8_A Vkorc1/thioredoxin doma 23.6 61 0.0021 20.9 2.8 57 55-117 15-75 (106)
269 2av4_A Thioredoxin-like protei 22.1 89 0.003 22.9 3.7 60 57-118 46-107 (160)
270 4g10_A Glutathione S-transfera 22.1 1.4E+02 0.0048 22.0 4.9 36 53-88 4-39 (265)
271 2pwj_A Mitochondrial peroxired 22.1 86 0.0029 21.7 3.5 42 61-102 53-102 (171)
272 3t58_A Sulfhydryl oxidase 1; o 21.6 1.7E+02 0.0058 24.6 5.9 57 56-114 34-97 (519)
273 4hde_A SCO1/SENC family lipopr 21.4 1.3E+02 0.0043 20.7 4.3 27 62-88 46-74 (170)
274 2f8a_A Glutathione peroxidase 21.2 1.3E+02 0.0045 21.5 4.5 34 55-88 50-86 (208)
275 3me7_A Putative uncharacterize 20.5 1.4E+02 0.0048 20.3 4.4 34 55-88 31-70 (170)
276 2hyx_A Protein DIPZ; thioredox 20.1 81 0.0028 25.2 3.4 34 56-89 86-122 (352)
No 1
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=94.42 E-value=0.21 Score=32.96 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=44.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEecc--chhHHHHHHhcCCCccCCcEEEEEE-CCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQ--SESGKKLLRRSGRAPDDISSVVLVE-KDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQ--S~~g~~lL~~~Gl~~e~~dsvllv~-~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-. .+.+.|+.+. .....++.+.+|+. .+=++++++ +|+.
T Consensus 29 ~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~--~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 29 TIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDAN--IVPTTVFLDKEGNK 95 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCC--SSSEEEEECTTCCE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCc--ceeEEEEECCCCCE
Confidence 4566889999999998887755432 2568888877 66666778888863 334777776 6764
No 2
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=93.93 E-value=0.27 Score=31.06 Aligned_cols=62 Identities=10% Similarity=0.210 Sum_probs=46.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-----CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-----RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-----~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.... ..+.|+.+......++.+.+|+. .+=+++++.+|+.
T Consensus 24 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~~ 90 (111)
T 3uvt_A 24 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVR--GYPTLLLFRGGKK 90 (111)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCC--cccEEEEEeCCcE
Confidence 35779999999999998888776543 47899888777767788898874 3346766676653
No 3
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=92.91 E-value=0.31 Score=31.00 Aligned_cols=62 Identities=10% Similarity=0.253 Sum_probs=43.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+... .+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 28 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 91 (115)
T 1thx_A 28 VLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVE--GVPALRLVKGEQI 91 (115)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCC--ceeEEEEEcCCEE
Confidence 3577899999999999887765432 245888888665556678888864 3346665577764
No 4
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=92.82 E-value=0.48 Score=30.70 Aligned_cols=62 Identities=5% Similarity=0.184 Sum_probs=45.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||--.|+.|......+.+...+-.+.|..+......++.+.+|+. .+=++++..+|+.
T Consensus 36 ~vv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 97 (117)
T 2xc2_A 36 VVVDFFATWCGPCKTIAPLFKELSEKYDAIFVKVDVDKLEETARKYNIS--AMPTFIAIKNGEK 97 (117)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTSSSEEEEEETTTSHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHhHHHHhHHHHHHHHHcCcEEEEEECCccHHHHHHcCCC--ccceEEEEeCCcE
Confidence 3566899999999999998887765447888888666666678888864 3336666667664
No 5
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=92.72 E-value=0.29 Score=31.24 Aligned_cols=62 Identities=10% Similarity=0.150 Sum_probs=42.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+... .+++.|..+......++.+.+|+. ..=++++..+|+.
T Consensus 26 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 89 (112)
T 1t00_A 26 VLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVM--SIPTLNVYQGGEV 89 (112)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCC--cccEEEEEeCCEE
Confidence 3577899999999998877755432 246888777655555677888864 2336666666664
No 6
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=92.64 E-value=0.61 Score=29.05 Aligned_cols=62 Identities=10% Similarity=0.177 Sum_probs=43.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.- -.+++.|..+......++.+.+|+. ..=++++..+|+.
T Consensus 21 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 84 (105)
T 1fb6_A 21 VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIR--SIPTVLFFKNGER 84 (105)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCC--cccEEEEEeCCeE
Confidence 457789999999999988775532 2345888888666556677888863 2336666666664
No 7
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=92.50 E-value=0.31 Score=32.00 Aligned_cols=62 Identities=6% Similarity=0.067 Sum_probs=43.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.- ..+++.|..+.-....++.+.+|+. ..=+++++.+|+.
T Consensus 34 vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 97 (119)
T 1w4v_A 34 VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVS--AVPTVLAMKNGDV 97 (119)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCC--cccEEEEEeCCcE
Confidence 357789999999999988776542 2346888888666556677888864 2336665566664
No 8
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=92.37 E-value=0.33 Score=30.51 Aligned_cols=62 Identities=11% Similarity=0.235 Sum_probs=42.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+.. ..+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 20 ~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 83 (105)
T 1nsw_A 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIM--SIPTLILFKGGRP 83 (105)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCc--cccEEEEEeCCeE
Confidence 357789999999999988775532 2345788777655555677888864 2336665577764
No 9
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=92.34 E-value=0.51 Score=30.13 Aligned_cols=62 Identities=3% Similarity=0.142 Sum_probs=41.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC---CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN---RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~---~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.... +.+.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 24 ~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 88 (112)
T 3d6i_A 24 IVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEIS--AVPYFIIIHKGTI 88 (112)
T ss_dssp EEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCC--cccEEEEEECCEE
Confidence 34668899999999998887655432 45888888666556677888863 3346666677764
No 10
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=92.31 E-value=0.26 Score=31.14 Aligned_cols=62 Identities=10% Similarity=0.227 Sum_probs=42.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.. -.+++.|..+......++.+.+|+. ..=++++..+|+.
T Consensus 22 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 85 (107)
T 1dby_A 22 VLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIR--SIPTIMVFKGGKK 85 (107)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCC--SSCEEEEESSSSE
T ss_pred EEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCC--cCCEEEEEeCCEE
Confidence 356789999999999988776543 2346888888665555677888864 2336665566654
No 11
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=92.06 E-value=0.38 Score=31.03 Aligned_cols=62 Identities=10% Similarity=0.197 Sum_probs=43.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+... .+++.|..+.-....++.+.+|+. ..=+++++.+|+.
T Consensus 33 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~--~~Pt~~~~~~g~~ 96 (121)
T 2i1u_A 33 VLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVV--SIPTLILFKDGQP 96 (121)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCC--cCCEEEEEECCEE
Confidence 4678899999999999988765432 246888877655555677888864 3346666666664
No 12
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=92.05 E-value=0.074 Score=32.38 Aligned_cols=59 Identities=10% Similarity=0.247 Sum_probs=38.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHh--CCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDN--DKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~--Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
..++||.-.|+.|......+.+. +..+++.|..+.-....++.+.+|+. .+=++++ +|+
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~--~G~ 65 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIM--AVPTIVI--NGD 65 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTC--CSSEEEE--TTE
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCc--ccCEEEE--CCE
Confidence 35789999999999999888763 23346777777544434456667653 2235544 555
No 13
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=92.04 E-value=0.3 Score=30.62 Aligned_cols=61 Identities=10% Similarity=0.166 Sum_probs=42.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+... .+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 24 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 86 (107)
T 2i4a_A 24 LVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVR--SIPTLMLVRDGKV 86 (107)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCC--ccCEEEEEeCCEE
Confidence 466899999999999887765432 246888888665555677888863 3346665577764
No 14
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=91.89 E-value=0.29 Score=30.66 Aligned_cols=62 Identities=6% Similarity=0.167 Sum_probs=44.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+... .+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 22 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 85 (106)
T 3die_A 22 QLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVM--SIPTLIVFKDGQP 85 (106)
T ss_dssp EEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SBSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCc--ccCEEEEEeCCeE
Confidence 4677899999999999887765432 345888888766666778888864 3347776677764
No 15
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=91.88 E-value=0.6 Score=30.22 Aligned_cols=62 Identities=13% Similarity=0.345 Sum_probs=43.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.... ..+.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 22 ~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 84 (110)
T 2l6c_A 22 AIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFE--RVPTLVFIRDGKV 84 (110)
T ss_dssp EEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCC--SSCEEEEEESSSE
T ss_pred EEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCc--ccCEEEEEECCEE
Confidence 45778999999999999988776543 35777776655555677888863 3346666577764
No 16
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=91.85 E-value=0.48 Score=31.99 Aligned_cols=62 Identities=11% Similarity=0.247 Sum_probs=46.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc---------hhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS---------ESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS---------~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||--.|+-|......+.+.-.+-.+.|+.+.. ....++.+.+|+. .+=+++++.+|+.
T Consensus 34 vlv~F~a~wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 104 (135)
T 3emx_A 34 AILAVYSKTCPHCHRDWPQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGVE--GTPTLVFYKEGRI 104 (135)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCcCHhhhHhChhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCCc--eeCeEEEEcCCEE
Confidence 467899999999999998888776543477776665 6666778888874 2337887777764
No 17
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=91.73 E-value=0.07 Score=32.49 Aligned_cols=59 Identities=10% Similarity=0.217 Sum_probs=38.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
..++||+-.|+.|......+.+.. ..+++.|..+.-....++.+.+|+. .+=++++ +|+
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~--~G~ 64 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLM--AVPAIAI--NGV 64 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSS--CSSEEEE--TTT
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCce--eeCEEEE--CCE
Confidence 457888999999999998886632 2335666666444444567777763 2235544 555
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=91.65 E-value=0.32 Score=30.74 Aligned_cols=61 Identities=10% Similarity=0.208 Sum_probs=42.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+.- -.+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 24 ~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 86 (108)
T 2trx_A 24 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIR--GIPTLLLFKNGEV 86 (108)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCc--ccCEEEEEeCCEE
Confidence 46789999999999988776543 2346888888655555677788863 2336666577764
No 19
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=91.61 E-value=0.37 Score=30.18 Aligned_cols=61 Identities=8% Similarity=0.203 Sum_probs=44.1
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||...|+.|......+.+... .+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 25 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~--~~Pt~~~~~~g~~ 87 (109)
T 3tco_A 25 LVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVL--NIPTTLIFVNGQL 87 (109)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcc--cCCEEEEEcCCcE
Confidence 567899999999999877765543 346888888766666788888864 3346665577764
No 20
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=91.56 E-value=0.46 Score=32.24 Aligned_cols=59 Identities=5% Similarity=0.022 Sum_probs=44.8
Q ss_pred EEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEEC--Cch
Q 033158 59 LYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEK--DRY 118 (126)
Q Consensus 59 ~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~--Gr~ 118 (126)
||+. |+-|......+.+.. .++++.|+-+..+...++++.+|+..+++=+++++.+ |+.
T Consensus 30 f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~~~g~~ 92 (133)
T 2djk_A 30 FAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKNQK 92 (133)
T ss_dssp ECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECTTTCCB
T ss_pred EecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEecCcCcc
Confidence 4445 999998877776544 3578999999888777889999998777778877764 554
No 21
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=91.44 E-value=0.48 Score=29.51 Aligned_cols=62 Identities=8% Similarity=0.235 Sum_probs=42.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+.-.. ..+.|..+......++.+.+|+. ..=++++..+|+.
T Consensus 22 ~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 84 (104)
T 2vim_A 22 IVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVT--AMPTFVFIKDGKE 84 (104)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCc--cccEEEEEeCCcE
Confidence 34668999999999998887654322 36778777665555677888863 3346666667764
No 22
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=91.19 E-value=0.84 Score=29.85 Aligned_cols=62 Identities=5% Similarity=0.086 Sum_probs=45.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||--.|+-|......+.+.... +.+.|+.+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 34 vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 96 (116)
T 3qfa_C 34 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVK--SMPTFQFFKKGQK 96 (116)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCC--SSSEEEEESSSSE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCc--cccEEEEEeCCeE
Confidence 45668999999999999888776543 34888888777667788888864 3346766676654
No 23
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.09 E-value=0.28 Score=32.21 Aligned_cols=60 Identities=13% Similarity=0.264 Sum_probs=41.1
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC------CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK------NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr------~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||.-.|+.|......+.+.-. .+++.|+.+.-....++.+.+++. .+=+++++++|+
T Consensus 29 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~ 94 (133)
T 1x5d_A 29 MVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIR--GFPTIKIFQKGE 94 (133)
T ss_dssp EEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCC--SSSEEEEEETTE
T ss_pred EEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCC--eeCeEEEEeCCC
Confidence 567889999999987766644322 156888888665555677788763 334677766665
No 24
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=91.07 E-value=0.53 Score=29.40 Aligned_cols=62 Identities=5% Similarity=0.092 Sum_probs=43.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-. ++.+.|..+......++.+.+|+. ..=++++..+|+.
T Consensus 23 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 86 (106)
T 1xwb_A 23 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNIS--SMPTFVFLKNGVK 86 (106)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCC--cccEEEEEcCCcE
Confidence 3567899999999998877765432 257888888766666678888864 2336666667664
No 25
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=91.00 E-value=0.56 Score=29.64 Aligned_cols=62 Identities=13% Similarity=0.303 Sum_probs=44.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+... .+++.|..+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 25 vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~~ 88 (111)
T 3gnj_A 25 CLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLK--GVPQILYFKDGEY 88 (111)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCC--SSCEEEEEETTEE
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCC--cCCEEEEEECCEE
Confidence 4577999999999998877765442 246888888766666788888864 3346666677653
No 26
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=90.98 E-value=0.57 Score=29.27 Aligned_cols=62 Identities=8% Similarity=0.158 Sum_probs=45.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-.. +.+.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 23 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVK--SMPTFQFFKKGQK 85 (105)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCC--BSSEEEEEETTEE
T ss_pred EEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCC--cCcEEEEEECCeE
Confidence 45779999999999998888665432 34888888776667788888863 3346776677664
No 27
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=90.79 E-value=0.59 Score=29.69 Aligned_cols=62 Identities=3% Similarity=-0.001 Sum_probs=43.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.... +++.|..+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 24 v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 86 (107)
T 1gh2_A 24 AVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNIS--ATPTFQFFRNKVR 86 (107)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCC--cccEEEEEECCeE
Confidence 35678999999999998877654322 46888777655555677888863 3347776677764
No 28
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=90.70 E-value=0.54 Score=30.31 Aligned_cols=61 Identities=7% Similarity=0.222 Sum_probs=42.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||...|+.|......+.+... .+.+.|..+......++.+.+|+. .+=++++..+|+.
T Consensus 30 lv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 91 (112)
T 1syr_A 30 IVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENIT--SMPTFKVYKNGSS 91 (112)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCC--cccEEEEEECCcE
Confidence 466889999999999988866432 235888777665556677888863 3336666667764
No 29
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=90.60 E-value=0.55 Score=29.81 Aligned_cols=62 Identities=5% Similarity=0.102 Sum_probs=43.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+... .+++.|..+......++.+.+|+. .+=++++..+|+.
T Consensus 27 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 90 (112)
T 1ep7_A 27 IVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGIT--AMPTFHVYKDGVK 90 (112)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCC--BSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCC--cccEEEEEECCeE
Confidence 4577899999999999888765432 236888888666666677888864 2336666667764
No 30
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=90.43 E-value=0.4 Score=30.42 Aligned_cols=61 Identities=7% Similarity=0.172 Sum_probs=41.8
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||...|+.|......+.+.... +.+.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 30 vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 91 (113)
T 1ti3_A 30 VVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVE--AMPTFIFLKDGKL 91 (113)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCS--STTEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCC--cccEEEEEeCCEE
Confidence 4557899999999988777654332 36888888665555677777763 3336666677764
No 31
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=90.35 E-value=0.68 Score=29.99 Aligned_cols=62 Identities=10% Similarity=0.109 Sum_probs=42.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-. .+.+.|..+.-....++.+.+|+. .+=++++..+|+.
T Consensus 37 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 99 (122)
T 2vlu_A 37 VVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVE--AMPTFLFMKEGDV 99 (122)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCC--cccEEEEEeCCEE
Confidence 4577899999999999887765432 123788877665555677888864 2336666677764
No 32
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=90.32 E-value=0.6 Score=28.76 Aligned_cols=61 Identities=11% Similarity=0.293 Sum_probs=41.9
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||...|+.|......+.+.... +.+.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 20 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 81 (104)
T 2e0q_A 20 VVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVM--SLPTVIFFKDGEP 81 (104)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SSCEEEEEETTEE
T ss_pred EEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCcc--ccCEEEEEECCeE
Confidence 5678899999999998877654321 22888887666556677888864 2346666566664
No 33
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=90.27 E-value=1.1 Score=27.51 Aligned_cols=46 Identities=11% Similarity=0.239 Sum_probs=29.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc--ch--hHHHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ--SE--SGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ--S~--~g~~lL~~~Gl 102 (126)
+.++|.--.|+.|.+...++..+.. .+.+..+. .. ..+++.+..|.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i--~~~~~~vd~~~~~~~~~el~~~~g~ 54 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNI--AFDETIIDDYAQRSKFYDEMNQSGK 54 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTC--CCEEEECCSHHHHHHHHHHHHTTTC
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCC--CceEEEeecCCChhHHHHHHHHhCC
Confidence 4556666899999999999988764 45555442 22 22445566664
No 34
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.25 E-value=0.5 Score=31.02 Aligned_cols=47 Identities=9% Similarity=0.169 Sum_probs=33.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccchhHHHHHHhcC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSESGKKLLRRSG 101 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~G 101 (126)
..++|+--.|+.|.....++.+...+-.+..+++..+...++.+.+|
T Consensus 18 ~v~~f~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~~~~~~el~~~~g 64 (100)
T 1wjk_A 18 VLTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYK 64 (100)
T ss_dssp EEEEEECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSS
T ss_pred EEEEEeCCCCcchHHHHHHHHHhhhCCeEEEEECCCcchHHHHHHHC
Confidence 45666666899999999998866554455566666334466777877
No 35
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=90.17 E-value=0.68 Score=28.85 Aligned_cols=61 Identities=15% Similarity=0.231 Sum_probs=42.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+... .+++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 22 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 84 (109)
T 2yzu_A 22 LVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVM--SIPTVILFKDGQP 84 (109)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCC--cCCEEEEEeCCcE
Confidence 577899999999998877755432 246888888655555677888864 3346665576664
No 36
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=90.12 E-value=0.63 Score=32.07 Aligned_cols=62 Identities=6% Similarity=0.155 Sum_probs=44.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.-. .+++.|+.+.-....++.+.+|+. .+=+++++++|+.
T Consensus 35 vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 97 (153)
T 2wz9_A 35 LVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEIS--SVPTFLFFKNSQK 97 (153)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCC--CCCEEEEEECCEE
Confidence 4577899999999998887765532 246888888666556677888863 3447777667764
No 37
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=89.91 E-value=0.71 Score=29.44 Aligned_cols=62 Identities=8% Similarity=0.112 Sum_probs=43.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-.. +.+.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 31 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 93 (118)
T 2vm1_A 31 VIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVE--AMPTFLFIKDGEK 93 (118)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC--SBSEEEEEETTEE
T ss_pred EEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCC--cCcEEEEEeCCeE
Confidence 45778999999999998887665332 36788877666666677888864 3346666677764
No 38
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=89.87 E-value=0.75 Score=29.70 Aligned_cols=61 Identities=8% Similarity=0.229 Sum_probs=43.6
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+-|......+.+... .+.+.|+.+.-....++.+.+|+. .+=+++++++|+.
T Consensus 28 lv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 89 (109)
T 3f3q_A 28 VVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVS--AMPTLLLFKNGKE 89 (109)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCC--ccCEEEEEECCEE
Confidence 456899999999999888866543 245778777666666678888864 3347777777764
No 39
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=89.86 E-value=1.6 Score=28.73 Aligned_cols=59 Identities=7% Similarity=0.066 Sum_probs=43.7
Q ss_pred cEEEEeCCCcchHHHHHHHHHh-------CCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDN-------DKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~-------Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
.+.||--.|+-|......+.+. +..+++.|+.+....-.++.+++++. .+=+++++.+|
T Consensus 37 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g 102 (127)
T 3h79_A 37 FVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVS--GFPTMRYYTRI 102 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCC--SSSEEEEECSS
T ss_pred EEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCc--cCCEEEEEeCC
Confidence 5668899999999998887765 23467999998777767788888864 34477766543
No 40
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=89.83 E-value=1.2 Score=29.20 Aligned_cols=62 Identities=8% Similarity=0.187 Sum_probs=43.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC--Cc-EEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN--RR-IRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~--~~-~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.... ++ +.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 36 vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~--~~Pt~~~~~~G~~ 100 (121)
T 2j23_A 36 VVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIR--AMPTFVFFKNGQK 100 (121)
T ss_dssp EEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCC--cccEEEEEECCeE
Confidence 35778899999999999888765543 22 788777665555677888864 3346766677764
No 41
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=89.73 E-value=0.8 Score=30.50 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=44.1
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+.-.+ +.+.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 42 vv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 103 (124)
T 1xfl_A 42 VVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQ--AMPTFMFLKEGKI 103 (124)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCC--ccCEEEEEECCEE
Confidence 4668999999999998888664332 36888888766666778888864 3336666677764
No 42
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.71 E-value=0.79 Score=30.39 Aligned_cols=60 Identities=12% Similarity=0.204 Sum_probs=41.3
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC-----CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND-----KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D-----r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||.-.|+.|......+.+.. ....+.|+.+......++.+.+|+. .+=+++++.+|+
T Consensus 38 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~ 102 (140)
T 2dj1_A 38 LLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVS--GYPTIKILKKGQ 102 (140)
T ss_dssp EEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCC--SSSEEEEEETTE
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCC--ccCeEEEEECCc
Confidence 46678889999998877665432 2234888888766556678888864 334666667665
No 43
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=89.66 E-value=0.72 Score=30.57 Aligned_cols=61 Identities=13% Similarity=0.313 Sum_probs=44.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+-|......+.+... .+++.|+.+.-....++.+++|+. .+=+++++.+|+.
T Consensus 46 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 108 (128)
T 3ul3_B 46 VLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVK--SLPTIILLKNKTM 108 (128)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCC--CcCEEEEEECCEE
Confidence 455899999999999888766543 257888888777667788888863 3346666677764
No 44
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=89.57 E-value=0.41 Score=30.95 Aligned_cols=62 Identities=6% Similarity=0.183 Sum_probs=41.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+... .+++.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 20 ~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 83 (112)
T 2voc_A 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVM--SIPTLLVLKDGEV 83 (112)
T ss_dssp EEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCC--SBSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCC--cccEEEEEeCCEE
Confidence 3567899999999998877755332 246788777655545577788863 3346665577764
No 45
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=88.99 E-value=0.91 Score=30.31 Aligned_cols=36 Identities=11% Similarity=0.373 Sum_probs=28.6
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ 89 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ 89 (126)
.-.+.||...|+.|......+.+.-.++++.|+.+.
T Consensus 44 ~~ll~f~~~~C~~C~~~~~~l~~l~~~~~v~~v~v~ 79 (156)
T 1kng_A 44 VSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGIN 79 (156)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred EEEEEEEcccCHhHHHHHHHHHHHHhcCCeEEEEEE
Confidence 346778999999999999999887665667777664
No 46
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=88.74 E-value=0.93 Score=29.32 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=34.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccchhH-----HHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSESG-----KKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g-----~~lL~~~Gl 102 (126)
..++|+-..|+.|......+.+... .+.++.+..... .++.+.+|+
T Consensus 21 ~vv~f~a~~C~~C~~~~~~l~~~~~--~~~~v~v~~~~~~~~~~~~l~~~~~v 71 (116)
T 2e7p_A 21 PVVVFSKTYCGYCNRVKQLLTQVGA--SYKVVELDELSDGSQLQSALAHWTGR 71 (116)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHHTC--CCEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred CEEEEECCCChhHHHHHHHHHHcCC--CeEEEEccCCCChHHHHHHHHHHhCC
Confidence 5677899999999999999988864 477888854332 345667775
No 47
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=88.47 E-value=1 Score=30.44 Aligned_cols=61 Identities=15% Similarity=0.309 Sum_probs=44.7
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+.|......+.+... .+++.|+.+......++.+.+|+. .+=+++++.+|+.
T Consensus 59 lv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 121 (148)
T 3p2a_A 59 VIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIR--SIPTIMLYRNGKM 121 (148)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCC--ccCEEEEEECCeE
Confidence 466899999999998877765432 356888888777777788888874 3347777677764
No 48
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=88.31 E-value=1 Score=30.38 Aligned_cols=61 Identities=10% Similarity=0.112 Sum_probs=44.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEE--CCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVE--KDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~--~Gr 117 (126)
-.+.||--.|+-|......+.+....-.+.|+.+......++.+.+|+. .+=+++++. +|+
T Consensus 43 vvv~F~a~wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 43 IVIKFGAVWCKPCNKIKEYFKNQLNYYYVTLVDIDVDIHPKLNDQHNIK--ALPTFEFYFNLNNE 105 (133)
T ss_dssp EEEEEECTTCHHHHHTHHHHHGGGGTEECEEEEEETTTCHHHHHHTTCC--SSSEEEEEEEETTE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHhcCEEEEEEeccchHHHHHhcCCC--CCCEEEEEEecCCC
Confidence 3566889999999999999888765546788888666666677888863 334666653 554
No 49
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=88.30 E-value=1.1 Score=30.02 Aligned_cols=61 Identities=13% Similarity=0.263 Sum_probs=44.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+... .+++.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 54 vv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 116 (140)
T 1v98_A 54 LVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVR--SVPTLVLFRRGAP 116 (140)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCC--ccCEEEEEeCCcE
Confidence 567889999999999888865432 346999888776666777888863 3346666677764
No 50
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=88.24 E-value=0.44 Score=32.07 Aligned_cols=61 Identities=8% Similarity=0.148 Sum_probs=41.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+.. -.+++.|+.+......++.+.+|+. .+=+++++.+|+.
T Consensus 44 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 106 (128)
T 2o8v_B 44 LVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIR--GIPTLLLFKNGEV 106 (128)
T ss_dssp EEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCC--ccCEEEEEeCCEE
Confidence 46789999999999887775543 2346888888665555567777763 3336665577764
No 51
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=88.21 E-value=0.94 Score=31.63 Aligned_cols=62 Identities=13% Similarity=0.236 Sum_probs=44.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-. .+++.|+.+..+.-.++.+++|+. .+=+++++.+|+.
T Consensus 67 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~--~~Pt~~~~~~G~~ 130 (155)
T 2ppt_A 67 LLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQ--GIPAFILFHKGRE 130 (155)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCC--cCCEEEEEeCCeE
Confidence 3577899999999999887765432 346888888766666678888863 3346666677764
No 52
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=88.05 E-value=0.81 Score=29.07 Aligned_cols=61 Identities=11% Similarity=0.130 Sum_probs=36.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|......+.+.... +++.|..+......++.+++|+. .+=+++++.+|+.
T Consensus 22 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 83 (105)
T 4euy_A 22 LLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVF--TGPTVLLFYNGKE 83 (105)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------C--CCCEEEEEETTEE
T ss_pred EEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCC--CCCEEEEEeCCeE
Confidence 4558899999999998888665432 47888887655555567777763 3346776677764
No 53
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=87.90 E-value=3.2 Score=29.72 Aligned_cols=59 Identities=17% Similarity=0.401 Sum_probs=41.8
Q ss_pred cEEEEeC-CCcchHHHHHHHHHhCC-CCcEEEEeccchh--HHHHHHhcCCCccCCcEEEEEECC
Q 033158 56 PIMLYDG-VCNLCNGGVKFVRDNDK-NRRIRYEALQSES--GKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 56 ~iV~FDG-~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~--g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
.+.||+. .|+.|......+.+... .+++.|+.+.-.. ..++.+.+|+. ..=++++..+|
T Consensus 26 lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~--~~Pt~~~~~~g 88 (226)
T 1a8l_A 26 LIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRID--RAPATTITQDG 88 (226)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCC--SSSEEEEEETT
T ss_pred EEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCC--cCceEEEEcCC
Confidence 3567777 89999999888876543 3568877775444 67788899875 34477666655
No 54
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=87.83 E-value=1.9 Score=28.81 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=43.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEE-ECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLV-EKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv-~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-. .+++.|+.+.-....++.+.+|+. .+=+++++ .+|+.
T Consensus 41 ~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 41 AIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIR--SIPSILFIPMEGKP 105 (136)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SSCEEEEECSSSCC
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCC--CCCEEEEECCCCcE
Confidence 3577899999999999887765432 346888888665555677888863 33466666 45654
No 55
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=87.54 E-value=0.51 Score=33.63 Aligned_cols=23 Identities=13% Similarity=0.221 Sum_probs=20.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHh
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDN 77 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~ 77 (126)
..++|+|=.||+|.+....+.+.
T Consensus 17 ~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 17 KVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp EEEEEECTTCHHHHHHHHHHTTC
T ss_pred EEEEEECCCChhHHHHHHHHhhc
Confidence 57899999999999999988776
No 56
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=87.53 E-value=0.3 Score=31.07 Aligned_cols=60 Identities=12% Similarity=0.232 Sum_probs=39.8
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-----CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-----NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-----~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||.-.|+.|......+.+... ..++.|+.+......++.+.+|+. .+=+++++.+|+
T Consensus 28 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~g~ 92 (120)
T 1mek_A 28 LVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVR--GYPTIKFFRNGD 92 (120)
T ss_dssp EEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCC--SSSEEEEEESSC
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCC--cccEEEEEeCCC
Confidence 577899999999988776654322 146778777655444567777763 234666666664
No 57
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.34 E-value=1.5 Score=28.64 Aligned_cols=60 Identities=10% Similarity=0.196 Sum_probs=40.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
-.+.||.-.|+.|......+.+.- -.+.+.|+.+.-....++.+.+++. .+=+++++++|
T Consensus 38 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~~ 99 (130)
T 2dml_A 38 WLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQ--GFPTIKIFGAN 99 (130)
T ss_dssp EEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCC--SSSEEEEESSC
T ss_pred EEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCC--ccCEEEEEeCC
Confidence 357789999999998887775532 2345788777655556677888863 33477776643
No 58
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=87.33 E-value=1 Score=30.16 Aligned_cols=62 Identities=3% Similarity=0.206 Sum_probs=43.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.-.. +.+.|..+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 40 vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~--~~Pt~~i~~~G~~ 102 (125)
T 1r26_A 40 TVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVL--QLPTFIIARSGKM 102 (125)
T ss_dssp EEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCC--cccEEEEEeCCeE
Confidence 45778999999999988877654322 45888888666556677888864 3346666666764
No 59
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=87.28 E-value=1.1 Score=29.01 Aligned_cols=58 Identities=14% Similarity=0.198 Sum_probs=41.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVE 114 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~ 114 (126)
-.+.||.-.|+.|......+.+... .+++.|+.+......++.+.+|+. .+=++++++
T Consensus 24 ~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~ 83 (122)
T 3aps_A 24 WVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIK--AYPSVKLYQ 83 (122)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCC--ccceEEEEe
Confidence 3577889999999998887765432 236888888766666678888864 334666664
No 60
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=87.28 E-value=1.4 Score=32.12 Aligned_cols=51 Identities=10% Similarity=0.148 Sum_probs=33.9
Q ss_pred CCcccceeecccCCCCCCCccEEEEeCCCcchHHHHHH------H-HHhCCCCcEEEEec
Q 033158 36 RDKVDYWVDATSSFFEPDSRPIMLYDGVCNLCNGGVKF------V-RDNDKNRRIRYEAL 88 (126)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~iV~FDG~C~LC~~~V~f------l-~r~Dr~~~~~F~~l 88 (126)
.+..||.+-..+.. .+...+.|||=.||.|...-.- + .++..+-++.+.++
T Consensus 7 ~eG~~Y~~l~~p~~--~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~ 64 (191)
T 3l9s_A 7 SDGKQYITLDKPVA--GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHV 64 (191)
T ss_dssp CBTTTEEECSSCCC--SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEEC
T ss_pred cCCCCceEcCCCCC--CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEec
Confidence 34568777655443 4557899999999999998642 3 33333457777665
No 61
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=87.18 E-value=0.92 Score=29.73 Aligned_cols=61 Identities=11% Similarity=0.217 Sum_probs=41.9
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+.|......+.+...+ +.+.|..+......++.+.+|+. .+=++++..+|+.
T Consensus 34 vv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 95 (114)
T 2oe3_A 34 VIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVT--AMPTFVLGKDGQL 95 (114)
T ss_dssp EEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SBSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCC--cccEEEEEeCCeE
Confidence 5678999999999998887665321 23778777655555677888763 3346666667764
No 62
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=87.11 E-value=2.7 Score=28.20 Aligned_cols=62 Identities=11% Similarity=0.274 Sum_probs=38.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEeccchh-------------------------HHHHHHhcCCCccC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQSES-------------------------GKKLLRRSGRAPDD 106 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQS~~-------------------------g~~lL~~~Gl~~e~ 106 (126)
-.+.||...|+.|......+.+.- ....+.++.+.... ..++.+.+|+. .
T Consensus 32 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~ 109 (152)
T 2lrn_A 32 VLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV--G 109 (152)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC--S
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC--c
Confidence 456789999999999887775532 22346666653222 34566777763 2
Q ss_pred CcEEEEEE-CCch
Q 033158 107 ISSVVLVE-KDRY 118 (126)
Q Consensus 107 ~dsvllv~-~Gr~ 118 (126)
.-++++++ +|+.
T Consensus 110 ~P~~~lid~~G~i 122 (152)
T 2lrn_A 110 FPHIILVDPEGKI 122 (152)
T ss_dssp SCEEEEECTTSEE
T ss_pred CCeEEEECCCCeE
Confidence 34666664 6664
No 63
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.04 E-value=1.1 Score=29.30 Aligned_cols=62 Identities=10% Similarity=0.111 Sum_probs=42.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+... ...+.|..+.-....++.+.+++. .+=+++++.+|+.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 89 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIIN--ALPTIYHCKDGEF 89 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCc--ccCEEEEEeCCeE
Confidence 4577889999999998887765432 126778777655555677888863 3346666677664
No 64
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=86.97 E-value=1.9 Score=28.60 Aligned_cols=61 Identities=18% Similarity=0.291 Sum_probs=43.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEE-CCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVE-KDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~-~Gr 117 (126)
-.+.||.-.|+.|......+.+... .+++.|+.+.-....++.+.+|+. .+=++++++ +|+
T Consensus 54 vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~~g~ 117 (141)
T 3hxs_A 54 AIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQ--SIPTIWFVPMKGE 117 (141)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEECSSSC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCC--CcCEEEEEeCCCC
Confidence 3566899999999998877765432 346888888766666788888864 334677664 555
No 65
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=86.49 E-value=1.7 Score=28.08 Aligned_cols=62 Identities=10% Similarity=0.147 Sum_probs=41.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccch----hHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSE----SGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~----~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+.|......+.+.-. ..++.++++... ...++.+.+|+. .+=+++++.+|+.
T Consensus 32 ~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~--~~Pt~~~~~~G~~ 99 (118)
T 1zma_A 32 ATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIP--TVPGFVHITDGQI 99 (118)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCC--SSCEEEEEETTEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCC--CCCeEEEEECCEE
Confidence 3577899999999998777655432 357888876542 234566777763 3346666677754
No 66
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=86.31 E-value=2.1 Score=33.27 Aligned_cols=59 Identities=12% Similarity=0.261 Sum_probs=45.2
Q ss_pred EEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccch--hHHHHHHhcCCCccCCcEEEEEEC
Q 033158 57 IMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSE--SGKKLLRRSGRAPDDISSVVLVEK 115 (126)
Q Consensus 57 iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~--~g~~lL~~~Gl~~e~~dsvllv~~ 115 (126)
++||+-.|+-|......+.+..+ ++++.|+.+... ....+++.+|+..++.-+++++..
T Consensus 140 v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~ 202 (361)
T 3uem_A 140 LLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITL 202 (361)
T ss_dssp EEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEEC
T ss_pred EEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEc
Confidence 56788899999988888776553 467888888766 577889999998666667766653
No 67
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=85.84 E-value=1.9 Score=26.38 Aligned_cols=48 Identities=13% Similarity=0.254 Sum_probs=34.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC--CcEEEEeccch-hHHHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN--RRIRYEALQSE-SGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~~lQS~-~g~~lL~~~Gl 102 (126)
+.++|+--.|+.|......+.+.-.+ ..+.+..+..+ ...++.+.+|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv 53 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGV 53 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTC
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCC
Confidence 56888889999999999977765543 35778888643 23456677775
No 68
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=85.62 E-value=1.8 Score=28.08 Aligned_cols=62 Identities=10% Similarity=0.215 Sum_probs=41.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccch-hHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSE-SGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~-~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.-.+ +.+.|+.+... ...++.+++|+. .+=++++..+|+.
T Consensus 40 ~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 103 (124)
T 1faa_A 40 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIR--VVPTFKILKENSV 103 (124)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCS--SSSEEEEEETTEE
T ss_pred EEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCC--eeeEEEEEeCCcE
Confidence 45778999999999998887654321 34777777544 345577788863 2336666667764
No 69
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=85.52 E-value=1.9 Score=29.09 Aligned_cols=62 Identities=11% Similarity=0.240 Sum_probs=43.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.-. .+++.|+.+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 27 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 90 (140)
T 3hz4_A 27 VVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQ--GTPTFKFFCHGRP 90 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCC--EESEEEEEETTEE
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCC--cCCEEEEEeCCcE
Confidence 3577899999999998877755432 245888887666566778888864 2236666676664
No 70
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=85.20 E-value=2.4 Score=27.87 Aligned_cols=58 Identities=7% Similarity=0.205 Sum_probs=44.3
Q ss_pred EEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 59 LYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 59 ~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
||=-.|+-|......+.+... .+.+.|+.+..+...++.+++|+. .+=+++++.+|+.
T Consensus 27 F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~--~~PT~~~~~~G~~ 85 (105)
T 3zzx_A 27 FYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIA--CMPTFLFMKNGQK 85 (105)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCC--BSSEEEEEETTEE
T ss_pred EECCCCCCccCCCcchhhhhhccCCeEEEEEecccCHHHHHHcCCC--eecEEEEEECCEE
Confidence 789999999999888766543 357888888777777788898873 3347777777764
No 71
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=85.15 E-value=1.4 Score=28.91 Aligned_cols=59 Identities=10% Similarity=0.249 Sum_probs=40.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEEC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEK 115 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~ 115 (126)
-.+.||--.|+.|......+.+.-.. +.+.|+.+.-..-.++.+.+|+. .+=+++++++
T Consensus 26 vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~--~~Pt~~~~~~ 85 (118)
T 2f51_A 26 VLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVS--SIPALFFVKK 85 (118)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC--SSSEEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCC--CCCEEEEEeC
Confidence 35678899999999988777554322 56777777655555677888864 3346666665
No 72
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=85.02 E-value=1.8 Score=32.15 Aligned_cols=60 Identities=12% Similarity=0.155 Sum_probs=45.8
Q ss_pred cEEEEeC--------CCcchHHHHHHHHHhCCC-------CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDG--------VCNLCNGGVKFVRDNDKN-------RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG--------~C~LC~~~V~fl~r~Dr~-------~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+|+|.. .|+.|....--+.+.... +++.|+-+.-+..+++..++|+ ..+=+++++.+|.
T Consensus 40 vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I--~siPtl~~F~~g~ 114 (178)
T 3ga4_A 40 NILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKL--QNVPHLVVYPPAE 114 (178)
T ss_dssp EEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTC--CSSCEEEEECCCC
T ss_pred EEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCC--CCCCEEEEEcCCC
Confidence 5888888 899999887777654431 7899999988888889999987 3445777776543
No 73
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=84.78 E-value=3.1 Score=25.05 Aligned_cols=46 Identities=13% Similarity=0.227 Sum_probs=32.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-hhHHHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-ESGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-~~g~~lL~~~Gl 102 (126)
+.++|+.-.|+.|.....++.+++ -.+...++.. +...+.++.+|+
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~~~--i~~~~vdi~~~~~~~~~~~~~g~ 48 (81)
T 1h75_A 2 RITIYTRNDCVQCHATKRAMENRG--FDFEMINVDRVPEAAEALRAQGF 48 (81)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT--CCCEEEETTTCHHHHHHHHHTTC
T ss_pred EEEEEcCCCChhHHHHHHHHHHCC--CCeEEEECCCCHHHHHHHHHhCC
Confidence 356777889999999999998764 3677788853 444444555664
No 74
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=84.69 E-value=1.7 Score=27.55 Aligned_cols=62 Identities=8% Similarity=0.142 Sum_probs=40.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccch-hHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSE-SGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~-~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+.-. .+.+.|..+... ...++.+.+|+. .+=++++..+|+.
T Consensus 27 vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 90 (111)
T 2pu9_C 27 VVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIR--VVPTFKILKENSV 90 (111)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCS--BSSEEEEESSSSE
T ss_pred EEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCC--eeeEEEEEeCCcE
Confidence 3567899999999999888766432 134777777544 344577788863 2236655556654
No 75
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=84.39 E-value=2.4 Score=27.72 Aligned_cols=34 Identities=9% Similarity=0.150 Sum_probs=24.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC----CCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND----KNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D----r~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.- ....+.++.+
T Consensus 36 vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v 73 (148)
T 3fkf_A 36 LLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGI 73 (148)
T ss_dssp EEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEE
Confidence 456688999999999988775543 2234766666
No 76
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=84.34 E-value=0.43 Score=38.24 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=25.8
Q ss_pred CCccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEe
Q 033158 53 DSRPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEA 87 (126)
Q Consensus 53 ~~~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~ 87 (126)
+...++|+|=.||+|.+.-..+.+.-.+.++++..
T Consensus 148 k~~I~vFtDp~CPYCkkl~~~l~~~l~~~~Vr~i~ 182 (273)
T 3tdg_A 148 DKILYIVSDPMCPHCQKELTKLRDHLKENTVRMVV 182 (273)
T ss_dssp TCEEEEEECTTCHHHHHHHHTHHHHHHHCEEEEEE
T ss_pred CeEEEEEECcCChhHHHHHHHHHHHhhCCcEEEEE
Confidence 34689999999999999988887332336666654
No 77
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=84.10 E-value=2.7 Score=30.14 Aligned_cols=60 Identities=8% Similarity=0.160 Sum_probs=42.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC------CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK------NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr------~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||.-.|+.|......+.+... .+++.|+.+......++.+.+|+. .+=+++++.+|.
T Consensus 138 ~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~ 203 (226)
T 1a8l_A 138 ILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVM--AVPKIVIQVNGE 203 (226)
T ss_dssp EEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCC--SSCEEEEEETTE
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCc--ccCeEEEEeCCc
Confidence 567999999999999887765432 147888888666656677888863 333666655554
No 78
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=83.87 E-value=1.8 Score=28.73 Aligned_cols=62 Identities=2% Similarity=-0.015 Sum_probs=43.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||--.|+-|......+.+.-. .+.+.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 49 vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 111 (139)
T 3d22_A 49 VLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIK--ATPTFFFLRDGQQ 111 (139)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCC--EESEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCC--cccEEEEEcCCeE
Confidence 3567899999999999888766432 245788777666666778888864 2235666677764
No 79
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=84.16 E-value=0.22 Score=30.98 Aligned_cols=62 Identities=10% Similarity=0.239 Sum_probs=41.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC--CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN--RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+.... +++.|..+......++.+.+|+. ..=+++++.+|+.
T Consensus 22 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 85 (106)
T 2yj7_A 22 VLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIR--SIPTLLLFKNGQV 85 (106)
Confidence 35778999999999998887665432 36888877665555666777753 2235554465653
No 80
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=83.64 E-value=0.74 Score=34.80 Aligned_cols=31 Identities=13% Similarity=0.195 Sum_probs=22.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRY 85 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F 85 (126)
..++|+|=.||.|...-.-+.+.-..+++++
T Consensus 100 ~v~~F~D~~Cp~C~~~~~~l~~~~~~g~v~v 130 (241)
T 1v58_A 100 IVYVFADPFCPYCKQFWQQARPWVDSGKVQL 130 (241)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTTSEEE
T ss_pred EEEEEECCCChhHHHHHHHHHHHHhCCcEEE
Confidence 5677999999999999887765433355544
No 81
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=83.62 E-value=1.8 Score=30.43 Aligned_cols=50 Identities=10% Similarity=0.072 Sum_probs=31.5
Q ss_pred CcccceeecccCCCCCCC-----ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEE--Eec
Q 033158 37 DKVDYWVDATSSFFEPDS-----RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRY--EAL 88 (126)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~-----~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F--~~l 88 (126)
...+|++-.. |-. +.. ..++|||=.||.|......+.+.-. .+++.| .++
T Consensus 7 ~g~~y~~~~~-p~~-g~~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 7 VGEDYVEIPD-GRP-FAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp BTTTEEECTT-CCC-SSCCTTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCcceeccC-CCC-CCCCCCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 4468665443 333 222 5788999999999998887765432 235555 455
No 82
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=83.51 E-value=4 Score=27.29 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=24.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQ 89 (126)
-.+.||--.|+-|.....-+.+.- +...+.++.+.
T Consensus 27 vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~ 64 (151)
T 3raz_A 27 RIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIA 64 (151)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEE
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 346688999999999988876642 23457766663
No 83
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=83.12 E-value=3.7 Score=27.79 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=25.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQ 89 (126)
-.+.||...|+.|......+.+.-.+ +.+.|+.+.
T Consensus 40 ~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~ 75 (165)
T 3ha9_A 40 VILWFMAAWCPSCVYMADLLDRLTEKYREISVIAID 75 (165)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred EEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEE
Confidence 45668899999999999888665432 267776663
No 84
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=82.82 E-value=2 Score=27.65 Aligned_cols=36 Identities=11% Similarity=0.345 Sum_probs=24.5
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEecc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQ 89 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQ 89 (126)
.-.+.||...|+.|......+.+.-. .+.+.|+.+.
T Consensus 26 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~ 62 (136)
T 1lu4_A 26 PAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIA 62 (136)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred EEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 34577899999999998877755432 1256666653
No 85
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=82.75 E-value=1.6 Score=30.45 Aligned_cols=63 Identities=5% Similarity=0.071 Sum_probs=37.8
Q ss_pred CccEEEEeCC---CcchHHHHHHHHHhCCC-CcEE--EEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 54 SRPIMLYDGV---CNLCNGGVKFVRDNDKN-RRIR--YEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 54 ~~~iV~FDG~---C~LC~~~V~fl~r~Dr~-~~~~--F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
+..+|+|.+. |+-|....-.+.+.-.+ +++. |+.+.-....++..++|+. .+=+++++.+|+.
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~--~iPT~~~fk~G~~ 103 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVR--RFPATLVFTDGKL 103 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCC--SSSEEEEESCC--
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCC--cCCeEEEEeCCEE
Confidence 3467778764 88898877666554322 5677 8888766666777888863 3446666677764
No 86
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=82.39 E-value=0.89 Score=29.87 Aligned_cols=59 Identities=7% Similarity=0.125 Sum_probs=38.1
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC----CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND----KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D----r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
.+.||--.|+-|......+.+.- ..+.+.|+.+.......+.+++++. .+=+++++++|
T Consensus 29 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~g 91 (133)
T 2dj3_A 29 LIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVE--GFPTIYFAPSG 91 (133)
T ss_dssp EEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCS--SSSEEEEECTT
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCC--cCCEEEEEeCC
Confidence 46688889999999887775532 2257899888655443344455542 33467776644
No 87
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=82.21 E-value=3.5 Score=27.34 Aligned_cols=43 Identities=14% Similarity=0.313 Sum_probs=30.1
Q ss_pred ccEEEEeC------CCcchHHHHHHHHHhCCCCcEEEEec-cchhHHHHHHh
Q 033158 55 RPIMLYDG------VCNLCNGGVKFVRDNDKNRRIRYEAL-QSESGKKLLRR 99 (126)
Q Consensus 55 ~~iV~FDG------~C~LC~~~V~fl~r~Dr~~~~~F~~l-QS~~g~~lL~~ 99 (126)
.++++|=- .||+|.+..+++.++.- .+...++ +.+..++.+..
T Consensus 18 ~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi--~~~~~dI~~~~~~~~~l~~ 67 (109)
T 3ipz_A 18 EKVVLFMKGTRDFPMCGFSNTVVQILKNLNV--PFEDVNILENEMLRQGLKE 67 (109)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTC--CCEEEEGGGCHHHHHHHHH
T ss_pred CCEEEEEecCCCCCCChhHHHHHHHHHHcCC--CcEEEECCCCHHHHHHHHH
Confidence 35666654 79999999999998754 5777777 44554444443
No 88
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=82.12 E-value=1.2 Score=30.54 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=36.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
..++|+=-.|++|.....++.+... .-.+.-+++.... ++.+++|+. +=+++++.+|+
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e~~i~~~~vDId~d~--~l~~~ygv~---VP~l~~~~dG~ 90 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKKSWFELEVINIDGNE--HLTRLYNDR---VPVLFAVNEDK 90 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHHSCCCCEEEETTTCH--HHHHHSTTS---CSEEEETTTTE
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHhcCCeEEEEECCCCH--HHHHHhCCC---CceEEEEECCE
Confidence 4566666699999999999987422 2345556665322 356778862 44555444454
No 89
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=82.04 E-value=4.7 Score=23.62 Aligned_cols=46 Identities=9% Similarity=0.134 Sum_probs=31.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-hhHHHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-ESGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-~~g~~lL~~~Gl 102 (126)
+.++|+...|+.|.....++.+++ -.+...++.. +...+.++.+|+
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~--i~~~~~di~~~~~~~~~~~~~~~ 48 (75)
T 1r7h_A 2 SITLYTKPACVQCTATKKALDRAG--LAYNTVDISLDDEARDYVMALGY 48 (75)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT--CCCEEEETTTCHHHHHHHHHTTC
T ss_pred eEEEEeCCCChHHHHHHHHHHHcC--CCcEEEECCCCHHHHHHHHHcCC
Confidence 356778889999999999998864 3677778754 333333445654
No 90
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=81.48 E-value=1.1 Score=29.97 Aligned_cols=34 Identities=9% Similarity=0.193 Sum_probs=23.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~l 88 (126)
-.+.||-..|+.|......+.+.-. +-.+..+++
T Consensus 33 vll~f~~~~C~~C~~~~~~l~~l~~~~~v~~v~v~~ 68 (154)
T 3ia1_A 33 AVIVFWASWCTVCKAEFPGLHRVAEETGVPFYVISR 68 (154)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred EEEEEEcccChhHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 4577889999999999888765533 234444444
No 91
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=81.37 E-value=3.2 Score=27.45 Aligned_cols=35 Identities=17% Similarity=0.438 Sum_probs=23.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQ 89 (126)
-.+.||...|+.|......+.+.- ....+.++.+.
T Consensus 33 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~ 70 (152)
T 2lja_A 33 IYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLS 70 (152)
T ss_dssp EEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEE
T ss_pred EEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEE
Confidence 456688899999998877665432 22357776663
No 92
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=80.78 E-value=0.73 Score=31.94 Aligned_cols=91 Identities=8% Similarity=0.195 Sum_probs=52.7
Q ss_pred ceeeeeeeCCCCCCcccceeecccCCCC-----CCCccEEEE-eCCCcchHHHHHHH---HHhC--CCCcEEEEeccch-
Q 033158 24 RTAVVATLSPPKRDKVDYWVDATSSFFE-----PDSRPIMLY-DGVCNLCNGGVKFV---RDND--KNRRIRYEALQSE- 91 (126)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~iV~F-DG~C~LC~~~V~fl---~r~D--r~~~~~F~~lQS~- 91 (126)
....++.+.......++ | +.....+. +..-.+.|| --.|+-|......+ .+.. ...++.++.+..+
T Consensus 16 ~~~~~~~l~~~~~~~~~-~-~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~ 93 (154)
T 2ju5_A 16 SGENLQQTRPIAAANLQ-W-ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQ 93 (154)
T ss_dssp CCCCSSCCCSSCCCCCC-E-ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCS
T ss_pred hhhcchhhhhcccCCCC-C-CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCcc
Confidence 35566677777777888 8 43322221 111233345 67999999998766 2211 1246777776542
Q ss_pred ----------hHHHHHHhcCCCccCCcEEEEEE-CCch
Q 033158 92 ----------SGKKLLRRSGRAPDDISSVVLVE-KDRY 118 (126)
Q Consensus 92 ----------~g~~lL~~~Gl~~e~~dsvllv~-~Gr~ 118 (126)
...++.+.+|+. .+=++++++ +|+.
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~v~--~~Pt~~~~d~~G~~ 129 (154)
T 2ju5_A 94 KNHQPEEQRQKNQELKAQYKVT--GFPELVFIDAEGKQ 129 (154)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCC--SSSEEEEECTTCCE
T ss_pred ccCCChhhHhhHHHHHHHcCCC--CCCEEEEEcCCCCE
Confidence 234577888864 234777774 6654
No 93
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=80.74 E-value=2.7 Score=30.28 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=44.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||.-.|+-|......+.+.- -.+.+.|+.+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 117 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~G~~ 180 (210)
T 3apq_A 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVN--SYPSLFIFRSGMA 180 (210)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCC--SSSEEEEECTTSC
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCC--cCCeEEEEECCCc
Confidence 357799999999999888776543 2356888888766666778888864 3347776676664
No 94
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.67 E-value=1.7 Score=29.00 Aligned_cols=63 Identities=8% Similarity=0.159 Sum_probs=43.8
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEeccchhHHHHHHhcCCCc----cCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQSESGKKLLRRSGRAP----DDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQS~~g~~lL~~~Gl~~----e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|......+.+.- ...++.|+.+.-....++.+++++.. ..+=+++++.+|+.
T Consensus 30 lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~ 99 (137)
T 2dj0_A 30 IVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKE 99 (137)
T ss_dssp EEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEE
Confidence 67889999999998877665432 22378999887766667788888751 12336666666664
No 95
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=80.43 E-value=2.9 Score=26.72 Aligned_cols=36 Identities=11% Similarity=0.350 Sum_probs=24.9
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEecc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQ 89 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQ 89 (126)
.-.+.||...|+.|......+.+.-. .+++.|+.+.
T Consensus 27 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~ 63 (136)
T 1zzo_A 27 PAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVA 63 (136)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred eEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 34677899999999999887766432 1256666554
No 96
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=80.31 E-value=5.2 Score=24.91 Aligned_cols=31 Identities=6% Similarity=0.262 Sum_probs=24.8
Q ss_pred EEEEeC----CCcchHHHHHHHHHhCCCCcEEEEecc
Q 033158 57 IMLYDG----VCNLCNGGVKFVRDNDKNRRIRYEALQ 89 (126)
Q Consensus 57 iV~FDG----~C~LC~~~V~fl~r~Dr~~~~~F~~lQ 89 (126)
+|+.=. .|++|.+..+++.++.- .+.+.++.
T Consensus 3 ~iY~~~~~~~~Cp~C~~ak~~L~~~gi--~y~~idI~ 37 (87)
T 1aba_A 3 KVYGYDSNIHKCGPCDNAKRLLTVKKQ--PFEFINIM 37 (87)
T ss_dssp EEEECCTTTSCCHHHHHHHHHHHHTTC--CEEEEESC
T ss_pred EEEEeCCCCCcCccHHHHHHHHHHcCC--CEEEEEee
Confidence 455555 89999999999988754 68888887
No 97
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=79.99 E-value=5.1 Score=27.02 Aligned_cols=62 Identities=13% Similarity=0.221 Sum_probs=39.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEeccchh-------------------HHHHHHhcCCCccCCcEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQSES-------------------GKKLLRRSGRAPDDISSVVL 112 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQS~~-------------------g~~lL~~~Gl~~e~~dsvll 112 (126)
-.+.||-..|+.|......+.+.- ....+.++.+.... ..++.+.+|+. ..-++++
T Consensus 44 vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~l 121 (158)
T 3hdc_A 44 VLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGAN--RLPDTFI 121 (158)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCC--SSSEEEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCC--CcceEEE
Confidence 356688999999999877775543 23578887775433 23466777763 2335566
Q ss_pred EE-CCch
Q 033158 113 VE-KDRY 118 (126)
Q Consensus 113 v~-~Gr~ 118 (126)
++ +|+.
T Consensus 122 id~~G~i 128 (158)
T 3hdc_A 122 VDRKGII 128 (158)
T ss_dssp ECTTSBE
T ss_pred EcCCCCE
Confidence 64 6654
No 98
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=79.67 E-value=3.9 Score=28.10 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=29.4
Q ss_pred CcccceeecccCCCCCCCccEEEEeCCCcchHHHHHHH----HHhCCCCcEEEEec
Q 033158 37 DKVDYWVDATSSFFEPDSRPIMLYDGVCNLCNGGVKFV----RDNDKNRRIRYEAL 88 (126)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~iV~FDG~C~LC~~~V~fl----~r~Dr~~~~~F~~l 88 (126)
+..+|=|-..+.- .+...+.|||=.||.|...-..+ .++....++.+.++
T Consensus 8 eG~~Y~vl~~p~~--~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 8 EGEHYQVLKTPAS--SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp BTTTEEECSSCCC--SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCCcEECCCCCC--CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 3455544333322 34457789999999999876544 33333456665554
No 99
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=79.65 E-value=2.3 Score=27.64 Aligned_cols=36 Identities=6% Similarity=0.194 Sum_probs=26.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQS 90 (126)
-.+.||...|+.|......+.+.- +...+.++.+..
T Consensus 37 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~ 75 (145)
T 3erw_A 37 TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNL 75 (145)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEEC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEc
Confidence 457799999999999887775543 224677777743
No 100
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=79.40 E-value=2.5 Score=29.93 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=24.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC--CcEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN--RRIRYE 86 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~ 86 (126)
..+.|||=.||.|...-..+.+.-.+ .++.|.
T Consensus 28 ~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~ 61 (192)
T 3h93_A 28 EVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFV 61 (192)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEE
T ss_pred EEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEE
Confidence 57889999999999999888655332 355554
No 101
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=79.09 E-value=1.5 Score=30.54 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=23.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC-CC--cEEEEe
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK-NR--RIRYEA 87 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr-~~--~~~F~~ 87 (126)
..++|+|=.||.|......+.+.-. .+ ++.|..
T Consensus 25 ~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~ 60 (175)
T 3gyk_A 25 TVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYRE 60 (175)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 5678999999999999888866532 23 455544
No 102
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=78.78 E-value=5.3 Score=27.21 Aligned_cols=45 Identities=7% Similarity=0.264 Sum_probs=30.7
Q ss_pred ccEEEEeC------CCcchHHHHHHHHHhCCCC-cEEEEecc-chhHHHHHHh
Q 033158 55 RPIMLYDG------VCNLCNGGVKFVRDNDKNR-RIRYEALQ-SESGKKLLRR 99 (126)
Q Consensus 55 ~~iV~FDG------~C~LC~~~V~fl~r~Dr~~-~~~F~~lQ-S~~g~~lL~~ 99 (126)
.++++|=- .||+|.+..+++.++.-.. .+...++. ++..++.+..
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~ 68 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKE 68 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHH
Confidence 45777765 7999999999999886432 27777773 4444444543
No 103
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=78.45 E-value=4.8 Score=24.10 Aligned_cols=45 Identities=11% Similarity=0.332 Sum_probs=30.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc--hhHHHHHHhcC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS--ESGKKLLRRSG 101 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS--~~g~~lL~~~G 101 (126)
+.++|+--.|+.|.....++....- .+...++.. +...++.+.+|
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i--~~~~~~i~~~~~~~~~~~~~~~ 48 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGV--SFQELPIDGNAAKREEMIKRSG 48 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTC--CCEEEECTTCSHHHHHHHHHHS
T ss_pred cEEEEECCCChhHHHHHHHHHHCCC--CcEEEECCCCHHHHHHHHHHhC
Confidence 3566777789999999999988753 577777753 22233444555
No 104
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=77.97 E-value=2.2 Score=29.68 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=22.9
Q ss_pred ccEEEEeCCCcchHHHHH----HHHHh--CCCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVK----FVRDN--DKNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~----fl~r~--Dr~~~~~F~~l 88 (126)
..++|+|=.||.|...-. ++.++ +.+=++.|.++
T Consensus 30 ~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 30 KMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 578899999999999884 44444 22224555554
No 105
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=77.79 E-value=4 Score=26.48 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=25.1
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEecc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQ 89 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQ 89 (126)
.-.+.||...|+.|......+.+.-. .+++.|+.+.
T Consensus 31 ~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~ 68 (148)
T 2b5x_A 31 PTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVH 68 (148)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEE
Confidence 34677899999999998887755432 1227777664
No 106
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=77.22 E-value=12 Score=24.35 Aligned_cols=62 Identities=10% Similarity=0.193 Sum_probs=38.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC----CCcEEEEec--cch----------------------hHHHHHHhcCCCccC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK----NRRIRYEAL--QSE----------------------SGKKLLRRSGRAPDD 106 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr----~~~~~F~~l--QS~----------------------~g~~lL~~~Gl~~e~ 106 (126)
-.+.||-..|+.|......+.+.-. ++.+.++.+ ..+ ...++.+.+|+. .
T Consensus 31 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~ 108 (144)
T 1o73_A 31 VFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE--S 108 (144)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC--S
T ss_pred EEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC--C
Confidence 3566888899999998887765421 235555444 432 133456666653 3
Q ss_pred CcEEEEEE--CCch
Q 033158 107 ISSVVLVE--KDRY 118 (126)
Q Consensus 107 ~dsvllv~--~Gr~ 118 (126)
+-++++++ +|+.
T Consensus 109 ~Pt~~lid~~~G~i 122 (144)
T 1o73_A 109 IPTLITINADTGAI 122 (144)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCEEEEEECCCCeE
Confidence 34677777 7775
No 107
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=76.79 E-value=8.5 Score=23.73 Aligned_cols=33 Identities=12% Similarity=0.283 Sum_probs=26.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ 89 (126)
+.+||..-.|+.|.+...++.++.- .+.+.++.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~gi--~~~~~~v~ 45 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREGV--DFEVIWID 45 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHTC--CCEEEEGG
T ss_pred eEEEEECCCChHHHHHHHHHHHcCC--CcEEEEee
Confidence 4567778889999999999988754 57777776
No 108
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=76.76 E-value=2 Score=29.25 Aligned_cols=33 Identities=12% Similarity=0.329 Sum_probs=23.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.-.+ .+.++.+
T Consensus 54 vll~F~a~~C~~C~~~~~~l~~l~~~-~v~vv~v 86 (168)
T 2b1k_A 54 VLLNVWATWCPTCRAEHQYLNQLSAQ-GIRVVGM 86 (168)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHC-CCEEEEE
Confidence 45678999999999998888665443 3444444
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=76.59 E-value=11 Score=24.91 Aligned_cols=60 Identities=12% Similarity=0.175 Sum_probs=39.4
Q ss_pred ccEEEEeCCCcchHHHHHHH------HHhCCCCcEEEEeccc----hhHHHHHHhcCCCccCCcEEEEE-ECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFV------RDNDKNRRIRYEALQS----ESGKKLLRRSGRAPDDISSVVLV-EKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl------~r~Dr~~~~~F~~lQS----~~g~~lL~~~Gl~~e~~dsvllv-~~Gr~ 118 (126)
-.+.||--.|+-|......+ .+.-. .+.++.+.- +...++.+.+|+. .+=+++++ .+|+.
T Consensus 34 vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~~~~~~l~~~~~v~--~~Pt~~~~d~~G~~ 104 (134)
T 2fwh_A 34 VMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTANDAQDVALLKHLNVL--GLPTILFFDGQGQE 104 (134)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCCHHHHHHHHHTTCC--SSSEEEEECTTSCB
T ss_pred EEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCcchHHHHHHHcCCC--CCCEEEEECCCCCE
Confidence 45668889999999876433 22222 377776655 5666788888874 33477777 46664
No 110
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=76.11 E-value=5.7 Score=27.17 Aligned_cols=44 Identities=9% Similarity=0.166 Sum_probs=30.4
Q ss_pred ccEEEEeC------CCcchHHHHHHHHHhCCCCcEEEEecc-chhHHHHHHh
Q 033158 55 RPIMLYDG------VCNLCNGGVKFVRDNDKNRRIRYEALQ-SESGKKLLRR 99 (126)
Q Consensus 55 ~~iV~FDG------~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-S~~g~~lL~~ 99 (126)
.++++|=- .||+|.+..+++.++.-. .+...++. ++..++.+..
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~-~~~~vdV~~d~~~~~~l~~ 70 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVR-DYAAYNVLDDPELRQGIKD 70 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC-CCEEEESSSCHHHHHHHHH
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHHcCCC-CCEEEEcCCCHHHHHHHHH
Confidence 35777766 799999999999887542 47777774 4555445544
No 111
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=75.37 E-value=6 Score=24.45 Aligned_cols=44 Identities=9% Similarity=0.234 Sum_probs=30.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccchhHHHHHHhc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSESGKKLLRRS 100 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~ 100 (126)
+.++|+--.|+.|.+...++.+.. -.+...++..+..+++.+.+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~--i~~~~vdv~~~~~~~l~~~~ 50 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG--VKYTDIDASTSLRQEMVQRA 50 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT--CCEEEECSCHHHHHHHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHHcC--CCcEEEECCHHHHHHHHHHh
Confidence 345555678999999999998875 36778888722333455555
No 112
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=75.33 E-value=8.2 Score=24.28 Aligned_cols=34 Identities=9% Similarity=0.191 Sum_probs=25.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.-. ...+.++.+
T Consensus 25 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 25 VYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 3456889999999999888855433 346888777
No 113
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=74.85 E-value=10 Score=23.86 Aligned_cols=37 Identities=5% Similarity=0.301 Sum_probs=28.9
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQS 90 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS 90 (126)
.+.++|+=..|+.|.....++.++... +.+.+.++..
T Consensus 12 ~~v~~f~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~ 49 (105)
T 1kte_A 12 GKVVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITA 49 (105)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGG
T ss_pred CCEEEEEcCCCHhHHHHHHHHHHcCCCCCccEEEEccC
Confidence 356778888999999999999887543 2388888865
No 114
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=74.11 E-value=9 Score=25.17 Aligned_cols=62 Identities=11% Similarity=0.019 Sum_probs=38.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC----CCCcEEEEec--cch----------------------hHHHHHHhcCCCccC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND----KNRRIRYEAL--QSE----------------------SGKKLLRRSGRAPDD 106 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D----r~~~~~F~~l--QS~----------------------~g~~lL~~~Gl~~e~ 106 (126)
-.+.||-..|+.|......+.+.- .++.+.++.+ ... ...++.+.+|+. .
T Consensus 31 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~ 108 (144)
T 1i5g_A 31 VFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK--S 108 (144)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC--S
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC--C
Confidence 346678889999999887765432 1235555544 431 134566777753 3
Q ss_pred CcEEEEEE--CCch
Q 033158 107 ISSVVLVE--KDRY 118 (126)
Q Consensus 107 ~dsvllv~--~Gr~ 118 (126)
+-++++++ +|+.
T Consensus 109 ~P~~~lid~~~G~i 122 (144)
T 1i5g_A 109 IPTLVGVEADSGNI 122 (144)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 34677776 6775
No 115
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=74.05 E-value=2.6 Score=27.64 Aligned_cols=63 Identities=19% Similarity=0.302 Sum_probs=41.1
Q ss_pred cEEEEeCCCcchHHHHHHHH--HhCC--CCcEEEEeccc---hhHHHHHHhcCCCc-cCCcEEEEE-ECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVR--DNDK--NRRIRYEALQS---ESGKKLLRRSGRAP-DDISSVVLV-EKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~--r~Dr--~~~~~F~~lQS---~~g~~lL~~~Gl~~-e~~dsvllv-~~Gr~ 118 (126)
.+.||--.|+-|......+. +... ++++.++.+.- ....++.+.+|+.. ..+=+++++ .+|+.
T Consensus 33 lv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 33 LLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp EEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred EEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 46688999999999887766 3222 13577766655 55566888888732 233467777 35653
No 116
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=73.98 E-value=9.1 Score=25.44 Aligned_cols=35 Identities=9% Similarity=0.266 Sum_probs=24.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~lQ 89 (126)
-.+.||...|+.|......+.+.- +...+.++.+.
T Consensus 37 vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~ 74 (165)
T 3or5_A 37 YIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIA 74 (165)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 456688999999999888775543 22347777663
No 117
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=73.97 E-value=1.4 Score=32.41 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=23.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYE 86 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~ 86 (126)
..++|+|-.||.|......+.+.... -++.+.
T Consensus 89 ~vv~F~d~~Cp~C~~~~~~l~~l~~~~v~v~~~ 121 (216)
T 1eej_A 89 VITVFTDITCGYCHKLHEQMADYNALGITVRYL 121 (216)
T ss_dssp EEEEEECTTCHHHHHHHTTHHHHHHTTEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHhCCcEEEEE
Confidence 56889999999999998888776432 234443
No 118
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=73.89 E-value=3.9 Score=29.49 Aligned_cols=56 Identities=13% Similarity=0.277 Sum_probs=39.3
Q ss_pred EEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 58 MLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 58 V~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.||.-.|+.|......+.+... .+.+.|..+......++.+.+|+. .+=++++ +|+
T Consensus 142 ~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~--~G~ 198 (229)
T 2ywm_A 142 VFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQDLAEQFQVV--GVPKIVI--NKG 198 (229)
T ss_dssp EEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGCHHHHHHTTCC--SSSEEEE--GGG
T ss_pred EEECCCCcchHHHHHHHHHHHHHCCCeEEEEEECCCCHHHHHHcCCc--ccCEEEE--CCE
Confidence 4999999999999888765432 247888888666556678888863 2335544 454
No 119
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=73.55 E-value=10 Score=27.01 Aligned_cols=60 Identities=15% Similarity=0.225 Sum_probs=42.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC-----CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND-----KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D-----r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||--.|+-|......+.+.. ....+.|+.+......++.+++|+. .+=+++++.+|+
T Consensus 36 ~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~ 100 (241)
T 3idv_A 36 LLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVS--GYPTIKILKKGQ 100 (241)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCC--SSSEEEEEETTE
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCC--cCCEEEEEcCCC
Confidence 56688999999999887776553 2234778777666666788898874 334777666665
No 120
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=73.47 E-value=6.2 Score=28.74 Aligned_cols=61 Identities=10% Similarity=0.222 Sum_probs=42.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|......+.+.-. .+++.|+.+.......+.+.+|+. .+=+++++.+|+.
T Consensus 34 vv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 96 (222)
T 3dxb_A 34 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIR--GIPTLLLFKNGEV 96 (222)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCC--SBSEEEEEETTEE
T ss_pred EEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCC--cCCEEEEEECCeE
Confidence 456899999999998887765532 345888877665555667787763 3346777777754
No 121
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=73.04 E-value=1.7 Score=30.77 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=24.2
Q ss_pred CcccceeecccCCCC--CCCccEEEEeCCCcchHHHHHHHHH
Q 033158 37 DKVDYWVDATSSFFE--PDSRPIMLYDGVCNLCNGGVKFVRD 76 (126)
Q Consensus 37 ~~~~~~~~~~~~~~~--~~~~~iV~FDG~C~LC~~~V~fl~r 76 (126)
+..||++-..+-.=. .+...++|||=.||.|......+.+
T Consensus 5 ~g~~y~~~~~p~~g~~~~~~~i~~f~d~~Cp~C~~~~~~l~~ 46 (195)
T 2znm_A 5 EGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLK 46 (195)
T ss_dssp BTTTEEECSSCCCCSSSSSEEEEEEECTTSCCTTSSCHHHHH
T ss_pred CCCcceEecCCCCCCCCCCcEEEEEECCCChhHHHHhHHHHH
Confidence 345766543322210 1225688999999999877666544
No 122
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=72.97 E-value=4 Score=30.04 Aligned_cols=35 Identities=9% Similarity=0.088 Sum_probs=27.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCC--cEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNR--RIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~--~~~F~~lQ 89 (126)
+..++||=.||+|......+.+.-.+. ++.|.+++
T Consensus 7 ~I~~~~D~~CP~Cy~~~~~l~~l~~~~~~~v~~~p~~ 43 (226)
T 1r4w_A 7 VLELFYDVLSPYSWLGFEVLCRYQHLWNIKLKLRPAL 43 (226)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTTSSEEEEEEECC
T ss_pred eEEEEEeCCChHHHHHHHHHHHHHHHcCCeEEEEeee
Confidence 468999999999999999888775433 46777763
No 123
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=72.94 E-value=8.8 Score=27.39 Aligned_cols=61 Identities=13% Similarity=0.230 Sum_probs=39.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHh-----CCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDN-----DKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~-----Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+-|......+.+. ++...+.|+.+......++.+++|+. .+=+++++.+|+.
T Consensus 151 ~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~~ 216 (241)
T 3idv_A 151 LVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVS--GYPTLKIFRKGRP 216 (241)
T ss_dssp EEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCc--ccCEEEEEECCeE
Confidence 4568899999998755444332 12334777777655555678888874 3447777776654
No 124
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=72.80 E-value=6 Score=25.89 Aligned_cols=34 Identities=3% Similarity=0.145 Sum_probs=26.1
Q ss_pred ccEEEEe-----CCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 55 RPIMLYD-----GVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FD-----G~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
+.+||+- -.|++|.+..+++.++.- .+...++..
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i--~~~~vdi~~ 54 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNSTGV--EYETFDILE 54 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHTCS--CEEEEESSS
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHcCC--CeEEEECCC
Confidence 4556666 599999999999988753 577888853
No 125
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=72.75 E-value=3.8 Score=28.04 Aligned_cols=61 Identities=7% Similarity=-0.074 Sum_probs=40.9
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|......+.+... .+++.|..+.-....++.+.+|+. .+=+++++.+|+.
T Consensus 27 lv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~--~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 27 VIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELY--DPCTVMFFFRNKH 89 (142)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSC--SSCEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCC--CCCEEEEEECCcE
Confidence 456889999999999887765432 346888877655444566677753 3346666666653
No 126
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=72.51 E-value=4.3 Score=28.54 Aligned_cols=21 Identities=19% Similarity=0.195 Sum_probs=17.9
Q ss_pred CccEEEEeCCCcchHHHHHHH
Q 033158 54 SRPIMLYDGVCNLCNGGVKFV 74 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl 74 (126)
...++|+|=.||.|...-..+
T Consensus 13 ~~i~~f~D~~Cp~C~~~~~~l 33 (186)
T 3bci_A 13 PLVVVYGDYKCPYCKELDEKV 33 (186)
T ss_dssp CEEEEEECTTCHHHHHHHHHH
T ss_pred eEEEEEECCCChhHHHHHHHH
Confidence 357889999999999988766
No 127
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=72.45 E-value=1.6 Score=32.13 Aligned_cols=32 Identities=16% Similarity=0.297 Sum_probs=23.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYE 86 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~ 86 (126)
..++|+|-.||.|......+.+.... -+++|.
T Consensus 89 ~vv~F~d~~Cp~C~~~~~~l~~~~~~~v~v~~~ 121 (211)
T 1t3b_A 89 VVTVFMDITCHYCHLLHQQLKEYNDLGITVRYL 121 (211)
T ss_dssp EEEEEECTTCHHHHHHHTTHHHHHHTTEEEEEE
T ss_pred EEEEEECCCCHhHHHHHHHHHHHHhCCcEEEEE
Confidence 57889999999999998888776432 244443
No 128
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=72.18 E-value=4.2 Score=30.13 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=22.0
Q ss_pred ccEEEEeCCCcchHHHHH----HHH-HhCCCCcEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVK----FVR-DNDKNRRIRYE 86 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~----fl~-r~Dr~~~~~F~ 86 (126)
..++|+|=.||+|.+.-. .|+ +.-..++++++
T Consensus 18 tivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v 54 (205)
T 3gmf_A 18 RLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIE 54 (205)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEE
Confidence 578899999999998764 334 33235666555
No 129
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=72.13 E-value=8.9 Score=27.51 Aligned_cols=58 Identities=14% Similarity=0.378 Sum_probs=35.8
Q ss_pred EEEE-eC-CCcchHHHHHHHHHhCC-------CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECC
Q 033158 57 IMLY-DG-VCNLCNGGVKFVRDNDK-------NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 57 iV~F-DG-~C~LC~~~V~fl~r~Dr-------~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
+++| |. .|+.|...-.++-.... .+++.++.+.-..-.++.+.+|+. ..=++++..+|
T Consensus 25 v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Ptl~~~~~~ 91 (229)
T 2ywm_A 25 IKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVD--RVPTIVIEGDK 91 (229)
T ss_dssp EEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCC--BSSEEEEESSS
T ss_pred EEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCC--cCcEEEEECCC
Confidence 4444 44 46666666555543332 467988888766666788899874 33466666443
No 130
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=71.95 E-value=3.1 Score=27.04 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=38.9
Q ss_pred ccEEEEeCCCcchHHHHHHH---HHh--CCCCcEEEEeccch--hHHHHHHhcCCCccCCcEEEEEE-CCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFV---RDN--DKNRRIRYEALQSE--SGKKLLRRSGRAPDDISSVVLVE-KDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl---~r~--Dr~~~~~F~~lQS~--~g~~lL~~~Gl~~e~~dsvllv~-~Gr~ 118 (126)
-.+.||--.|+-|......+ ... ..+.++.+..+... ...++.+.+|+. .+=++++++ +|+.
T Consensus 30 vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~--~~Pt~~~~d~~G~~ 99 (130)
T 2kuc_A 30 LFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVH--AYPTLLFINSSGEV 99 (130)
T ss_dssp EEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCC--SSCEEEEECTTSCE
T ss_pred EEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCC--CCCEEEEECCCCcE
Confidence 35667889999999987766 211 11245677766543 345677888863 334676764 5654
No 131
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=71.67 E-value=11 Score=24.89 Aligned_cols=34 Identities=9% Similarity=0.219 Sum_probs=23.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.- ....+.++.+
T Consensus 31 vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v 67 (154)
T 3kcm_A 31 VIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCV 67 (154)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 456689999999999887775542 2235666655
No 132
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=71.63 E-value=18 Score=25.75 Aligned_cols=53 Identities=8% Similarity=0.051 Sum_probs=42.8
Q ss_pred CcchHHHHHHHHHhCC--CCc-EEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 64 CNLCNGGVKFVRDNDK--NRR-IRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 64 C~LC~~~V~fl~r~Dr--~~~-~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
|+=|....-.+.+... .++ ++|+-+.-+.-.++..+||+. .+=++++..+|+.
T Consensus 48 CgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~--sIPTlilFk~G~~ 103 (140)
T 2qgv_A 48 TPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAF--RFPATLVFTGGNY 103 (140)
T ss_dssp CTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCC--SSSEEEEEETTEE
T ss_pred CCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCc--cCCEEEEEECCEE
Confidence 8889888888876654 367 999999998888999999973 4458888888875
No 133
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=71.41 E-value=8.6 Score=26.73 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=24.9
Q ss_pred CcccceeecccCCCCCCCccEEEEeCCCcchHHHHHHH
Q 033158 37 DKVDYWVDATSSFFEPDSRPIMLYDGVCNLCNGGVKFV 74 (126)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~iV~FDG~C~LC~~~V~fl 74 (126)
+..+|+|-..+.- +.+...+.|||=.||.|...-..+
T Consensus 3 ~g~~y~~lg~p~~-~~~~~~ief~d~~CP~C~~~~~~l 39 (195)
T 3c7m_A 3 EGTDYMVLEKPIP-NADKTLIKVFSYACPFCYKYDKAV 39 (195)
T ss_dssp BTTTEEECSSCCS-SCTTEEEEEECTTCHHHHHHHHHT
T ss_pred CCceeeeccCCCC-CCCcEEEEEEeCcCcchhhCcHHH
Confidence 3457777655411 023356789999999999887666
No 134
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=71.29 E-value=7.6 Score=27.00 Aligned_cols=43 Identities=14% Similarity=0.331 Sum_probs=27.9
Q ss_pred cEEEE-eCC-----CcchHHHHHHHHHhCCCCcEEEEec-cchhHHHHHHh
Q 033158 56 PIMLY-DGV-----CNLCNGGVKFVRDNDKNRRIRYEAL-QSESGKKLLRR 99 (126)
Q Consensus 56 ~iV~F-DG~-----C~LC~~~V~fl~r~Dr~~~~~F~~l-QS~~g~~lL~~ 99 (126)
++|+| =|. ||+|.+..+.+....- ..+....+ .++..++.+..
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv-~~~~~~~v~~~~~~r~~l~~ 70 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRLHGV-RDYAAYNVLDDPELRQGIKD 70 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTC-CSCEEEETTSCHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHHHhCC-cCeEeecccCCHHHHHHHHH
Confidence 45555 564 9999999999987653 24666665 44554544544
No 135
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=70.62 E-value=6.6 Score=26.57 Aligned_cols=35 Identities=6% Similarity=-0.120 Sum_probs=23.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQ 89 (126)
-.+.||-..|+.|.....-+.+.-. ...+.++.+.
T Consensus 38 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~ 75 (152)
T 2lrt_A 38 VLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQIS 75 (152)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 3566788999999998877655432 2236666663
No 136
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=70.40 E-value=20 Score=23.53 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=38.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC----CCcEEEEec--cch----------------------hHHHHHHhcCCCccC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK----NRRIRYEAL--QSE----------------------SGKKLLRRSGRAPDD 106 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr----~~~~~F~~l--QS~----------------------~g~~lL~~~Gl~~e~ 106 (126)
-.+.||-..|+.|......+.+.-. ++.+.++.+ ... ...++.+.+|+. .
T Consensus 31 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~ 108 (146)
T 1o8x_A 31 VFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE--S 108 (146)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC--S
T ss_pred EEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC--C
Confidence 3466788899999998876654321 235555444 431 134566777763 3
Q ss_pred CcEEEEEE--CCch
Q 033158 107 ISSVVLVE--KDRY 118 (126)
Q Consensus 107 ~dsvllv~--~Gr~ 118 (126)
+-++++++ +|+.
T Consensus 109 ~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 109 IPTLIGVDADSGDV 122 (146)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCEEEEEECCCCeE
Confidence 34677776 7775
No 137
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=70.38 E-value=7.7 Score=28.87 Aligned_cols=61 Identities=7% Similarity=0.119 Sum_probs=43.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||-..|+-|......+.+.-.. ..+.|+.+... ...+...+++ ..+=+++++.+|..
T Consensus 123 vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i--~~~PTl~~~~~G~~ 184 (217)
T 2trc_P 123 IVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSS--DVLPTLLVYKGGEL 184 (217)
T ss_dssp EEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCG--GGCSEEEEEETTEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCC--CCCCEEEEEECCEE
Confidence 35779999999999999988776543 57888888765 3334555554 33347777777764
No 138
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=70.30 E-value=6.5 Score=25.89 Aligned_cols=34 Identities=9% Similarity=0.280 Sum_probs=22.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.-. ...+.++.+
T Consensus 31 vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 67 (152)
T 3gl3_A 31 VYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAV 67 (152)
T ss_dssp EEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 3456889999999998877755432 222655555
No 139
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=70.29 E-value=7.8 Score=27.71 Aligned_cols=21 Identities=10% Similarity=0.194 Sum_probs=17.7
Q ss_pred CCccEEEEeCCCcchHHHHHH
Q 033158 53 DSRPIMLYDGVCNLCNGGVKF 73 (126)
Q Consensus 53 ~~~~iV~FDG~C~LC~~~V~f 73 (126)
....+.|||-.||.|...-..
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~ 35 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQT 35 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHT
T ss_pred CCEEEEEECCCChhHHHHhHh
Confidence 446788999999999998765
No 140
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=70.17 E-value=9.6 Score=25.43 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=30.3
Q ss_pred ccEEEEe------CCCcchHHHHHHHHHhCCCCcEEEEecc-chhHHHHHHh
Q 033158 55 RPIMLYD------GVCNLCNGGVKFVRDNDKNRRIRYEALQ-SESGKKLLRR 99 (126)
Q Consensus 55 ~~iV~FD------G~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-S~~g~~lL~~ 99 (126)
.++++|= -.||+|.+..+++..+.- .+...++. ++..++.+..
T Consensus 16 ~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi--~y~~~di~~d~~~~~~l~~ 65 (111)
T 3zyw_A 16 APCMLFMKGTPQEPRCGFSKQMVEILHKHNI--QFSSFDIFSDEEVRQGLKA 65 (111)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTC--CCEEEEGGGCHHHHHHHHH
T ss_pred CCEEEEEecCCCCCcchhHHHHHHHHHHcCC--CeEEEECcCCHHHHHHHHH
Confidence 4677775 489999999999998754 57777774 4454444443
No 141
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=69.98 E-value=5.6 Score=29.67 Aligned_cols=61 Identities=11% Similarity=0.170 Sum_probs=43.3
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|......+.+.-. .+++.|+.+....-.++.+.+|+. .+=+++++.+|+.
T Consensus 30 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~G~~ 92 (287)
T 3qou_A 30 LFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLR--AIPTVYLFQNGQP 92 (287)
T ss_dssp EEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCC--CCCeEEEEECCEE
Confidence 466899999999987777655432 246888888766666788888864 3347777677754
No 142
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=69.15 E-value=3.6 Score=29.45 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=23.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC----CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK----NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr----~~~~~F~~l 88 (126)
+..+|||=.||.|...-+.+.+... +=++.+.+.
T Consensus 9 ~I~~f~D~~CP~C~~~~~~~~~l~~~~~~~v~v~~~~~ 46 (216)
T 2in3_A 9 VLWYIADPMCSWCWGFAPVIENIRQEYSAFLTVKIMPG 46 (216)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred eEEEEECCCCchhhcchHHHHHHHhcCCCCeEEEEeec
Confidence 5688999999999987666655432 235566555
No 143
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=69.01 E-value=22 Score=24.34 Aligned_cols=61 Identities=10% Similarity=0.154 Sum_probs=38.0
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC----CCCcEEEEec--cchhH----------------------HHHHHhcCCCccCC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND----KNRRIRYEAL--QSESG----------------------KKLLRRSGRAPDDI 107 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D----r~~~~~F~~l--QS~~g----------------------~~lL~~~Gl~~e~~ 107 (126)
.+.||-..|+.|......+.+.- .++.+.++.+ ..... .++.+.+|+. .+
T Consensus 52 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~--~~ 129 (165)
T 3s9f_A 52 FFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE--SI 129 (165)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC--SS
T ss_pred EEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC--CC
Confidence 45578899999999887775542 2235555554 33321 4566777763 33
Q ss_pred cEEEEEE-C-Cch
Q 033158 108 SSVVLVE-K-DRY 118 (126)
Q Consensus 108 dsvllv~-~-Gr~ 118 (126)
-++++++ + |++
T Consensus 130 Pt~~lid~~~G~i 142 (165)
T 3s9f_A 130 PTLIGLNADTGDT 142 (165)
T ss_dssp SEEEEEETTTCCE
T ss_pred CEEEEEeCCCCEE
Confidence 4677777 4 775
No 144
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=69.00 E-value=8.2 Score=24.91 Aligned_cols=34 Identities=3% Similarity=0.145 Sum_probs=25.3
Q ss_pred ccEEEEe-----CCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 55 RPIMLYD-----GVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FD-----G~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
+.+||+- -.|+.|.+...++.++.- .+...++..
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i--~~~~vdi~~ 56 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGV--EYETFDILE 56 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTC--CCEEEEGGG
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCC--CeEEEECCC
Confidence 4455555 689999999999988763 577777743
No 145
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=68.85 E-value=18 Score=26.33 Aligned_cols=56 Identities=5% Similarity=0.095 Sum_probs=39.2
Q ss_pred EEeCCCcchHHHHHHHHHhC--CCCcEEEEeccc--hhHHHHHHhcCCCccCCcEEEEEE
Q 033158 59 LYDGVCNLCNGGVKFVRDND--KNRRIRYEALQS--ESGKKLLRRSGRAPDDISSVVLVE 114 (126)
Q Consensus 59 ~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS--~~g~~lL~~~Gl~~e~~dsvllv~ 114 (126)
|+|..|.=|..+...+++.- -++++.|+-+.. +..+.+++.+|++.++.=++.++.
T Consensus 138 f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~ 197 (227)
T 4f9z_D 138 IMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQ 197 (227)
T ss_dssp EECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEE
T ss_pred EEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEE
Confidence 44988998988776665432 346788888877 345668899999866555665554
No 146
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=68.69 E-value=5.9 Score=27.39 Aligned_cols=49 Identities=14% Similarity=0.255 Sum_probs=32.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec--cc---hhHHHHHHhcCCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL--QS---ESGKKLLRRSGRA 103 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l--QS---~~g~~lL~~~Gl~ 103 (126)
-.+.||-..|+.|......+.+.-. ...+.++.+ .. +..++.++.++++
T Consensus 63 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~ 119 (186)
T 1jfu_A 63 LLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLT 119 (186)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCC
T ss_pred EEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3566888999999998877755432 245655555 32 2346677788764
No 147
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=68.51 E-value=6 Score=26.10 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=23.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.- ....+.++.+
T Consensus 31 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 67 (153)
T 2l5o_A 31 TLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAV 67 (153)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 457788999999999887775542 2234766654
No 148
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=68.49 E-value=4.1 Score=28.84 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=19.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND 78 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D 78 (126)
..++|||=.||.|......+.+.-
T Consensus 28 ~vv~f~d~~Cp~C~~~~~~l~~l~ 51 (195)
T 3hd5_A 28 EVLEFFAYTCPHCAAIEPMVEDWA 51 (195)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCccHHHhhHHHHHHH
Confidence 468899999999999888876553
No 149
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=68.15 E-value=22 Score=23.41 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=23.9
Q ss_pred ccEEEEeCCCcc--hHHHHHHHHHhC----CCCcEEEEec
Q 033158 55 RPIMLYDGVCNL--CNGGVKFVRDND----KNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~L--C~~~V~fl~r~D----r~~~~~F~~l 88 (126)
-.+.||-..|+- |......+.+.- ....+.++.+
T Consensus 36 vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v 75 (150)
T 3fw2_A 36 LLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGI 75 (150)
T ss_dssp EEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred EEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 345678999999 999988775543 2234776665
No 150
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=67.97 E-value=12 Score=24.04 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=37.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
+.++|+=-.|++|.....++.+.... .+.-+++.... ++.+++|+. +=++++ .+|+
T Consensus 2 ~vv~f~a~~C~~C~~~~~~L~~~~~~-~~~~vdid~~~--~l~~~~g~~---vPtl~~-~~G~ 57 (87)
T 1ttz_A 2 ALTLYQRDDCHLCDQAVEALAQARAG-AFFSVFIDDDA--ALESAYGLR---VPVLRD-PMGR 57 (87)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHTTCC-CEEEEECTTCH--HHHHHHTTT---CSEEEC-TTCC
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHh-heEEEECCCCH--HHHHHhCCC---cCeEEE-ECCE
Confidence 46788888999999999999887543 25566775422 356677762 335544 4444
No 151
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=67.66 E-value=0.9 Score=29.54 Aligned_cols=62 Identities=8% Similarity=0.117 Sum_probs=40.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
-.+.||...|+.|......+.+.... +.+.|..+......++.+.+|+. .+=+++++.+|+.
T Consensus 39 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~--~~Pt~~~~~~g~~ 101 (130)
T 1wmj_A 39 VIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVE--AMPTFLFIKDGAE 101 (130)
T ss_dssp CBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCC--SSCCCCBCTTTTC
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCC--ccceEEEEeCCeE
Confidence 46778899999999888777654322 25777777665555677788763 2224544455553
No 152
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=67.60 E-value=8.3 Score=23.78 Aligned_cols=45 Identities=13% Similarity=0.227 Sum_probs=30.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-hh-HHHHHHhcC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-ES-GKKLLRRSG 101 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-~~-g~~lL~~~G 101 (126)
+.++|+--.|+.|.....++..+. -.+...++.. +. .+++.+.+|
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~~--i~~~~~di~~~~~~~~~l~~~~~ 53 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARKG--AEFNEIDASATPELRAEMQERSG 53 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT--CCCEEEESTTSHHHHHHHHHHHT
T ss_pred cEEEEECCCChhHHHHHHHHHHcC--CCcEEEECCCCHHHHHHHHHHhC
Confidence 456667788999999999998864 3577888853 23 233444454
No 153
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=67.56 E-value=3.9 Score=24.68 Aligned_cols=46 Identities=13% Similarity=0.372 Sum_probs=28.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEeccchh--HHHHHHhcC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQSES--GKKLLRRSG 101 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQS~~--g~~lL~~~G 101 (126)
.++|+-..|+.|.....++.+... .-.+...++.... .+++.+.+|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~ 53 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAG 53 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhC
Confidence 456666789999999999887432 2234445553321 134566666
No 154
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=67.45 E-value=14 Score=21.50 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=31.3
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC--CCCcEEEEeccchhHHHHHHhcCC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND--KNRRIRYEALQSESGKKLLRRSGR 102 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D--r~~~~~F~~lQS~~g~~lL~~~Gl 102 (126)
.+.||=..|+.|......+.+.. ...++.+..+.. .++.+.+|+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~---~~~~~~~~v 48 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIKE---MDQILEAGL 48 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEECS---HHHHHHHTC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEecC---HHHHHHCCC
Confidence 46677789999999988876532 235788888873 235667776
No 155
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=66.90 E-value=24 Score=24.37 Aligned_cols=61 Identities=8% Similarity=0.175 Sum_probs=40.9
Q ss_pred EEEE-eCCCcchHHHHHHHHHh--CCCCcEEEEeccchhH--HHHHHhcCCCccCCcEEEEEECCch
Q 033158 57 IMLY-DGVCNLCNGGVKFVRDN--DKNRRIRYEALQSESG--KKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 57 iV~F-DG~C~LC~~~V~fl~r~--Dr~~~~~F~~lQS~~g--~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
+|+| -..||-|......+.+. +.+-.+.+++++..-- .++.+++|+.-+- =+++++.+|+.
T Consensus 28 vi~khatwCgpc~~~~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~s-Pq~il~k~G~~ 93 (112)
T 3iv4_A 28 FVLKHSETCPISANAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHES-PQAFYFVNGEM 93 (112)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCS-SEEEEEETTEE
T ss_pred EEEEECCcCHhHHHHHHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCC-CeEEEEECCEE
Confidence 4444 66999999988777655 3345678888875421 3467888875332 37778888875
No 156
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=66.47 E-value=4.4 Score=26.39 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=23.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.-. ...+.++.+
T Consensus 34 vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 70 (148)
T 3hcz_A 34 TILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAA 70 (148)
T ss_dssp EEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEE
Confidence 3456889999999998877755421 223777666
No 157
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=66.29 E-value=8.9 Score=26.68 Aligned_cols=34 Identities=6% Similarity=0.106 Sum_probs=25.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ 89 (126)
-.+.||...|+.|......+.+.-.+ .+.++.+.
T Consensus 61 vll~F~a~~C~~C~~~~~~l~~l~~~-~v~vv~vs 94 (176)
T 3kh7_A 61 ALVNVWGTWCPSCRVEHPELTRLAEQ-GVVIYGIN 94 (176)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHC-CCEEEEEe
Confidence 45668899999999999888776554 46666654
No 158
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.25 E-value=8.4 Score=26.09 Aligned_cols=34 Identities=15% Similarity=0.303 Sum_probs=28.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
+.+||+--.|+.|.....++.++.- .+.+.++..
T Consensus 28 ~vvvf~~~~Cp~C~~~~~~L~~~~i--~~~~vdid~ 61 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTMAKKLFHDMNV--NYKVVELDL 61 (130)
T ss_dssp SEEEEECSSCSHHHHHHHHHHHHTC--CCEEEETTT
T ss_pred cEEEEEcCCChHHHHHHHHHHHcCC--CcEEEECcC
Confidence 5778888999999999999998764 577777754
No 159
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=66.22 E-value=16 Score=25.11 Aligned_cols=48 Identities=6% Similarity=0.124 Sum_probs=28.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcE------EEEec--cc---hhHHHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRI------RYEAL--QS---ESGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~------~F~~l--QS---~~g~~lL~~~Gl 102 (126)
-.+.||--.|+.|......+.+.-. ...+ .|+.+ .. +..++.++.+++
T Consensus 62 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~ 123 (183)
T 3lwa_A 62 VILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGL 123 (183)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTC
T ss_pred EEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCC
Confidence 3466889999999998877755421 1113 66555 33 344555565555
No 160
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=66.09 E-value=6.3 Score=28.33 Aligned_cols=32 Identities=9% Similarity=0.231 Sum_probs=23.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC--CcEEEE
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN--RRIRYE 86 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~ 86 (126)
..+.|||=.||.|...-..+.+.-.+ +++.|.
T Consensus 27 ~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~ 60 (193)
T 3hz8_A 27 EVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLR 60 (193)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEE
Confidence 46789999999999998888665432 255554
No 161
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=65.43 E-value=14 Score=24.08 Aligned_cols=50 Identities=6% Similarity=0.167 Sum_probs=34.2
Q ss_pred CCccEEEEeCCCcchHHHHHHHHHhCCC-CcEEEEeccch----hH-HHHHHhcCC
Q 033158 53 DSRPIMLYDGVCNLCNGGVKFVRDNDKN-RRIRYEALQSE----SG-KKLLRRSGR 102 (126)
Q Consensus 53 ~~~~iV~FDG~C~LC~~~V~fl~r~Dr~-~~~~F~~lQS~----~g-~~lL~~~Gl 102 (126)
..+.++|+--.|+.|.....++.+..-. +++...++... .. +++.+.+|.
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~ 73 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG 73 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSC
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCcCceEEEEccCCCChHHHHHHHHHHhCC
Confidence 3467888889999999999999776532 22888888543 22 344556664
No 162
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=65.41 E-value=21 Score=24.36 Aligned_cols=61 Identities=7% Similarity=-0.017 Sum_probs=42.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC--CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN--RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||=-.|+-|......+.+...+ +++.|..+.-....++.+.+++. .+=++++..+|+.
T Consensus 27 lv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 89 (149)
T 3gix_A 27 VLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDIS--YIPSTVFFFNGQH 89 (149)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCC--SSSEEEEEETTEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCC--ccCeEEEEECCeE
Confidence 3558889999999999888766542 45888877665556677888863 3335556566653
No 163
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=63.57 E-value=7.1 Score=28.28 Aligned_cols=19 Identities=5% Similarity=-0.008 Sum_probs=15.0
Q ss_pred ccEEEEeCCCcchHHHHHH
Q 033158 55 RPIMLYDGVCNLCNGGVKF 73 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~f 73 (126)
..++|+|=.||+|.+.-.-
T Consensus 17 tiv~f~D~~Cp~C~~~~~~ 35 (182)
T 3gn3_A 17 LFEVFLEPTCPFSVKAFFK 35 (182)
T ss_dssp EEEEEECTTCHHHHHHHTT
T ss_pred EEEEEECCCCHhHHHHHHH
Confidence 4677889999999987433
No 164
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=63.40 E-value=18 Score=23.45 Aligned_cols=41 Identities=5% Similarity=0.251 Sum_probs=30.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-hhHHHHH
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-ESGKKLL 97 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-~~g~~lL 97 (126)
+.+||.--.|++|.+...++.++.- .+...++.. +..++.+
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~~~i--~y~~idI~~~~~~~~~l 58 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKRKGV--EFQEYCIDGDNEAREAM 58 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHTC--CCEEEECTTCHHHHHHH
T ss_pred CEEEEEcCCChhHHHHHHHHHHCCC--CCEEEEcCCCHHHHHHH
Confidence 5677778899999999999998864 577778743 4444434
No 165
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=63.36 E-value=5.8 Score=26.20 Aligned_cols=61 Identities=10% Similarity=0.223 Sum_probs=39.9
Q ss_pred cEEEEeCCCc--------------chHHHHHHHHHhCCC--CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCN--------------LCNGGVKFVRDNDKN--RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~--------------LC~~~V~fl~r~Dr~--~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||.-.|+ .|......+.+...+ +++.|+.+.-....++.+++|+. .+=+++++.+|+.
T Consensus 25 lv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~--~~Pt~~~~~~G~~ 101 (123)
T 1oaz_A 25 LVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIR--GIPTLLLFKNGEV 101 (123)
T ss_dssp EEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGGGGTCC--BSSEEEEEESSSE
T ss_pred EEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCC--ccCEEEEEECCEE
Confidence 4668899999 999988877655432 46888887655555667788864 2346666577764
No 166
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=63.15 E-value=9.1 Score=25.01 Aligned_cols=59 Identities=10% Similarity=0.122 Sum_probs=38.3
Q ss_pred cEEEEeC-------CCcchHHHHHHHHHhCCC--CcEEEEeccc-------hhHHHHHHhcCCCccCCcEEEEEECC
Q 033158 56 PIMLYDG-------VCNLCNGGVKFVRDNDKN--RRIRYEALQS-------ESGKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 56 ~iV~FDG-------~C~LC~~~V~fl~r~Dr~--~~~~F~~lQS-------~~g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
.+.||-. .|+-|......+.+.-.+ +++.|+.+.. ....++.+.+|+. .+=++++++++
T Consensus 28 ~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~--~~Pt~~~~~~~ 102 (123)
T 1wou_A 28 FAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVT--AVPTLLKYGTP 102 (123)
T ss_dssp EEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCC--SSSEEEETTSS
T ss_pred EEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCC--eeCEEEEEcCC
Confidence 3556666 899999999988775432 4688877755 3344566677753 33466666543
No 167
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=63.13 E-value=6.8 Score=28.60 Aligned_cols=18 Identities=17% Similarity=0.119 Sum_probs=15.4
Q ss_pred ccEEEEeCCCcchHHHHH
Q 033158 55 RPIMLYDGVCNLCNGGVK 72 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~ 72 (126)
..++|+|=.||.|...-.
T Consensus 32 tvvef~D~~CP~C~~~~~ 49 (202)
T 3gha_A 32 TVVEFGDYKCPSCKVFNS 49 (202)
T ss_dssp EEEEEECTTCHHHHHHHH
T ss_pred EEEEEECCCChhHHHHHH
Confidence 578899999999998743
No 168
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=62.63 E-value=20 Score=23.43 Aligned_cols=34 Identities=3% Similarity=0.002 Sum_probs=24.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC---CcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN---RRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~---~~~~F~~l 88 (126)
-.+.|+-..|+-|......+.+.-.+ ..+.++.+
T Consensus 35 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (143)
T 4fo5_A 35 TLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSI 71 (143)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEE
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEE
Confidence 34567889999999998877665432 45777766
No 169
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=62.21 E-value=9.1 Score=27.53 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=24.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC----CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK----NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr----~~~~~F~~l 88 (126)
+..++||=.||.|...-..+.+.-. .=.+.+.+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p~ 41 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVG 41 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEEEEEEC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCCCceEEEEec
Confidence 5688999999999988876655432 245677775
No 170
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=61.98 E-value=16 Score=26.68 Aligned_cols=58 Identities=12% Similarity=0.184 Sum_probs=40.9
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--C---CcEEEEeccc--hhHHHHHHhcCCCccCCcEEEEEEC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--N---RRIRYEALQS--ESGKKLLRRSGRAPDDISSVVLVEK 115 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~---~~~~F~~lQS--~~g~~lL~~~Gl~~e~~dsvllv~~ 115 (126)
.+.||--.|+-|......+.+... . ..+.|+.+.- +...++.+.+|+. .+=+++++.+
T Consensus 34 lv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~--~~Pt~~~~~~ 98 (244)
T 3q6o_A 34 AVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP--GFPTVRFFXA 98 (244)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC--SSSEEEEECT
T ss_pred EEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC--ccCEEEEEeC
Confidence 466899999999998877765432 1 3688877764 5556788888863 3447777664
No 171
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=61.89 E-value=6.6 Score=27.27 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=23.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQ 89 (126)
-.+.||...|+.|......+.+.-. ...+.++.+.
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~ 86 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAIN 86 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 4567889999999988877755432 2236665553
No 172
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=61.40 E-value=7.2 Score=26.93 Aligned_cols=62 Identities=13% Similarity=0.029 Sum_probs=38.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCC------CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKN------RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~------~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
..+.||--.|+.|...-..+...-.. -.+..+++.....+.+-..+++ .-+=+++++++|+-
T Consensus 21 ~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V--~g~PT~i~f~~G~e 88 (116)
T 3dml_A 21 RLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPV--TFTPTFVLMAGDVE 88 (116)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCC--CSSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCC--CCCCEEEEEECCEE
Confidence 46889999999999987666433221 3577888876432223334443 23338888888764
No 173
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=60.88 E-value=14 Score=25.07 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=22.1
Q ss_pred cEEEE-eCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 56 PIMLY-DGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 56 ~iV~F-DG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
.+.|| -..|+.|.....-+.+.-. ...+.++.+
T Consensus 33 vl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v 69 (161)
T 3drn_A 33 VLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGV 69 (161)
T ss_dssp EEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEE
T ss_pred EEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 44466 8899999999887765432 223666555
No 174
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=60.83 E-value=28 Score=23.71 Aligned_cols=33 Identities=9% Similarity=0.234 Sum_probs=26.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
.+|+.--.|+.|.....|+..+. -.+.+.++..
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~g--i~y~~~di~~ 35 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEHE--IPFVERNIFS 35 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT--CCEEEEETTT
T ss_pred EEEEeCCCChHHHHHHHHHHHcC--CceEEEEccC
Confidence 56777889999999999998865 3678888843
No 175
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=60.61 E-value=5.1 Score=26.18 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=21.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHH------hCCCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRD------NDKNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r------~Dr~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+ .-+...+.++.+
T Consensus 30 vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v 69 (142)
T 3ewl_A 30 TMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAI 69 (142)
T ss_dssp EEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEE
Confidence 3456889999999998554433 111234666666
No 176
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=60.40 E-value=8.8 Score=25.49 Aligned_cols=34 Identities=12% Similarity=0.247 Sum_probs=23.4
Q ss_pred cEEEEeCCCcchHHH-HHHHHHhC---CCCcEEEEecc
Q 033158 56 PIMLYDGVCNLCNGG-VKFVRDND---KNRRIRYEALQ 89 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~-V~fl~r~D---r~~~~~F~~lQ 89 (126)
.+.||-..|+.|... ...+.+.- +...+.++.+.
T Consensus 32 lv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~ 69 (158)
T 3eyt_A 32 VIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLH 69 (158)
T ss_dssp EEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred EEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEE
Confidence 455889999999995 66665443 22467777664
No 177
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=59.49 E-value=21 Score=26.58 Aligned_cols=56 Identities=11% Similarity=0.312 Sum_probs=38.7
Q ss_pred cEEEEeCC--CcchHHHHHHHHHhCC-----CCc--EEEEeccchhHHHHHHhcCCCccCCcEEEEE
Q 033158 56 PIMLYDGV--CNLCNGGVKFVRDNDK-----NRR--IRYEALQSESGKKLLRRSGRAPDDISSVVLV 113 (126)
Q Consensus 56 ~iV~FDG~--C~LC~~~V~fl~r~Dr-----~~~--~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv 113 (126)
.+.+|-.+ |+-|.....++...-. +++ +.|+-+..+...++.+.+|++ .+=++++.
T Consensus 29 ~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~--~~Pt~~i~ 93 (243)
T 2hls_A 29 EVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVE--RVPTVAFL 93 (243)
T ss_dssp EEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCC--SSSEEEET
T ss_pred EEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCC--cCCEEEEE
Confidence 46677667 9999998888865432 233 888877655556788999986 44465554
No 178
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=59.34 E-value=22 Score=23.40 Aligned_cols=34 Identities=12% Similarity=0.286 Sum_probs=22.8
Q ss_pred cEEEEeCCCcchHHH-HHHHHHhC---CCCcEEEEecc
Q 033158 56 PIMLYDGVCNLCNGG-VKFVRDND---KNRRIRYEALQ 89 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~-V~fl~r~D---r~~~~~F~~lQ 89 (126)
.+.||-..|+-|... ...+.+.- +...+.++.+.
T Consensus 34 lv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~ 71 (160)
T 3lor_A 34 VVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLH 71 (160)
T ss_dssp EEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred EEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEe
Confidence 456889999999994 66654432 23347777764
No 179
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=58.84 E-value=19 Score=25.10 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=24.5
Q ss_pred CCcchHHHHHHHHHhCCCCcEEEEecc-chhHHHHHH
Q 033158 63 VCNLCNGGVKFVRDNDKNRRIRYEALQ-SESGKKLLR 98 (126)
Q Consensus 63 ~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-S~~g~~lL~ 98 (126)
.|++|.+..+++.++.- .+...++. .+..++.+.
T Consensus 49 ~Cp~C~~ak~~L~~~gv--~y~~vdI~~d~~~~~~L~ 83 (135)
T 2wci_A 49 SCGFSAQAVQALAACGE--RFAYVDILQNPDIRAELP 83 (135)
T ss_dssp SSHHHHHHHHHHHTTCS--CCEEEEGGGCHHHHHHHH
T ss_pred CCccHHHHHHHHHHcCC--ceEEEECCCCHHHHHHHH
Confidence 89999999999988754 57777874 444444443
No 180
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=57.78 E-value=25 Score=22.57 Aligned_cols=34 Identities=9% Similarity=0.158 Sum_probs=27.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
+.++|.--.||.|.+...++.++.- .+...++..
T Consensus 20 ~v~vy~~~~Cp~C~~~~~~L~~~~i--~~~~~di~~ 53 (113)
T 3rhb_A 20 TVVIYSKTWCSYCTEVKTLFKRLGV--QPLVVELDQ 53 (113)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHTTC--CCEEEEGGG
T ss_pred CEEEEECCCChhHHHHHHHHHHcCC--CCeEEEeec
Confidence 4677778899999999999988754 567778854
No 181
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=57.76 E-value=6.5 Score=28.22 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=26.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQ 89 (126)
+..++||=.||+|......+.+.-. .-++.|.+++
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~~v~~~p~~ 38 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGLTIRYNAID 38 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCCEEEEEECC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEeee
Confidence 3578999999999999888765422 2468888875
No 182
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=57.04 E-value=7.8 Score=26.86 Aligned_cols=36 Identities=6% Similarity=0.247 Sum_probs=23.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS 90 (126)
-.+.||...|+.|......+.+.-. .+++.++.+..
T Consensus 36 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~ 73 (188)
T 2cvb_A 36 LAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINA 73 (188)
T ss_dssp EEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEEC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEc
Confidence 4567889999999987766654321 12277777743
No 183
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=57.04 E-value=22 Score=28.07 Aligned_cols=60 Identities=7% Similarity=0.207 Sum_probs=41.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--------CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--------NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--------~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||--.|+-|.....-+.+... .+.+.|+.+....-.++.+++|+. ..=++++..+|+
T Consensus 26 lV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~--~~Pt~~~f~~G~ 93 (382)
T 2r2j_A 26 LVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRIS--KYPTLKLFRNGM 93 (382)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCC--EESEEEEEETTE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCC--cCCEEEEEeCCc
Confidence 467899999999998877655321 356999988766556678888874 233666666555
No 184
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=54.43 E-value=7.7 Score=26.99 Aligned_cols=33 Identities=9% Similarity=0.225 Sum_probs=21.1
Q ss_pred cEEEEeCC-CcchHHHHHHHHHhCCCCcEEEEec
Q 033158 56 PIMLYDGV-CNLCNGGVKFVRDNDKNRRIRYEAL 88 (126)
Q Consensus 56 ~iV~FDG~-C~LC~~~V~fl~r~Dr~~~~~F~~l 88 (126)
.+.||-+. |+.|...+..+.+.-.+..+.++.+
T Consensus 48 vl~F~~t~~C~~C~~~~~~l~~l~~~~~v~vv~I 81 (175)
T 1xvq_A 48 LLNIFPSVDTPVCATSVRTFDERAAASGATVLCV 81 (175)
T ss_dssp EEEECSCCCSSCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHhhcCCEEEEE
Confidence 44455577 9999999887765432244555554
No 185
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=53.99 E-value=55 Score=25.12 Aligned_cols=60 Identities=12% Similarity=0.216 Sum_probs=39.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CC--cEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NR--RIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~--~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||--.|+-|.....-+.+... .+ .+.++.+......++...+|+. .+=+++++.+|+
T Consensus 39 lV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~--~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 39 LVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVN--GFPTLMVFRPPK 102 (298)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCC--BSSEEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCC--ccceEEEEECCc
Confidence 466899999999998877655432 23 3455555543455678888864 344777776554
No 186
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=53.68 E-value=14 Score=26.37 Aligned_cols=51 Identities=18% Similarity=0.136 Sum_probs=29.2
Q ss_pred cccceeecccCCCCCCCccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEec
Q 033158 38 KVDYWVDATSSFFEPDSRPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEAL 88 (126)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~l 88 (126)
..+|=+-..+..-++....+.|||=.||.|.+.-..+.+.-+ +-.++..++
T Consensus 8 G~~Y~~l~~~~~~~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~v~~~~~p~ 60 (185)
T 3feu_A 8 GVQYEVLSTSLENDGMAPVTEVFALSCGHCRNMENFLPVISQEAGTDIGKMHI 60 (185)
T ss_dssp TTTEEECSSCCTTSCCCSEEEEECTTCHHHHHHGGGHHHHHHHHTSCCEEEEC
T ss_pred CCCceEcCCCCCCCCCCEEEEEECCCChhHHHhhHHHHHHHHHhCCeEEEEec
Confidence 345444333322113346788999999999987544432211 235666776
No 187
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=53.66 E-value=15 Score=27.44 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=28.2
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCCC--CcEEEEec
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDKN--RRIRYEAL 88 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~~l 88 (126)
.++.++||=.||+|--..+.+.+.-.. -.+.|.|+
T Consensus 6 ~~I~~~~D~~CPwcyi~~~~L~~~~~~~~v~v~~~p~ 42 (234)
T 3rpp_A 6 RTVELFYDVLSPYSWLGFEILCRYQNIWNINLQLRPS 42 (234)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTSSEEEEEEEC
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 367899999999999999999877543 35778876
No 188
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=53.52 E-value=21 Score=29.03 Aligned_cols=60 Identities=8% Similarity=0.151 Sum_probs=43.7
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CC-cEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NR-RIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~-~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||--.|+-|.....-+.+... ++ .+.|+.+....-..+.+++|+. ..=+++++.+|.
T Consensus 35 lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~ 97 (504)
T 2b5e_A 35 LAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIP--GFPSLKIFKNSD 97 (504)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEETTC
T ss_pred EEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCC--cCCEEEEEeCCc
Confidence 477999999999998877765432 23 5888888766666788898874 334777766665
No 189
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=53.45 E-value=19 Score=25.16 Aligned_cols=34 Identities=15% Similarity=0.303 Sum_probs=28.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
+.+||+.-.|+.|.....++.++.- .+...++..
T Consensus 50 ~Vvvf~~~~Cp~C~~~k~~L~~~~i--~~~~vdId~ 83 (146)
T 2ht9_A 50 CVVIFSKTSCSYCTMAKKLFHDMNV--NYKVVELDL 83 (146)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHHTC--CCEEEEGGG
T ss_pred CEEEEECCCChhHHHHHHHHHHcCC--CeEEEECcc
Confidence 5788999999999999999998764 577777753
No 190
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=52.68 E-value=44 Score=21.61 Aligned_cols=43 Identities=7% Similarity=0.103 Sum_probs=31.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc-chhHHHHHHh
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ-SESGKKLLRR 99 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-S~~g~~lL~~ 99 (126)
..+|+==-.||+|.+.-+++.++.- .+...++. ++.+.+.+..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~gi--~y~~idi~~d~~~~~~~~~ 48 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTANRI--AYDEVDIEHNRAAAEFVGS 48 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHTTC--CCEEEETTTCHHHHHHHHH
T ss_pred cEEEEcCCCCHhHHHHHHHHHhcCC--ceEEEEcCCCHHHHHHHHH
Confidence 3556667899999999999988654 67888884 4555555544
No 191
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=52.61 E-value=26 Score=21.95 Aligned_cols=45 Identities=4% Similarity=0.031 Sum_probs=30.3
Q ss_pred ccEEEEeCCCcch------HHHHHHHHHhCCCCcEEEEeccc-hhHHH-HHHhcC
Q 033158 55 RPIMLYDGVCNLC------NGGVKFVRDNDKNRRIRYEALQS-ESGKK-LLRRSG 101 (126)
Q Consensus 55 ~~iV~FDG~C~LC------~~~V~fl~r~Dr~~~~~F~~lQS-~~g~~-lL~~~G 101 (126)
+.+|+.=..|++| .+..+++..+.- .+...++.. +..++ +.+..|
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i--~~~~~di~~~~~~~~~l~~~~g 55 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGKRI--QYQLVDISQDNALRDEMRTLAG 55 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTC--CCEEEETTSCHHHHHHHHHHTT
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHCCC--ceEEEECCCCHHHHHHHHHHhC
Confidence 4566777789999 888888887643 577788843 34433 344445
No 192
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=52.55 E-value=30 Score=23.04 Aligned_cols=35 Identities=9% Similarity=0.155 Sum_probs=24.9
Q ss_pred ccEEEEeCCCc-chHHHHHHHHHhCCC-C-----cEEEEecc
Q 033158 55 RPIMLYDGVCN-LCNGGVKFVRDNDKN-R-----RIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~-LC~~~V~fl~r~Dr~-~-----~~~F~~lQ 89 (126)
-.+.|+-..|+ .|......+.+.-.+ + ++.++.+.
T Consensus 38 vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is 79 (172)
T 2k6v_A 38 VLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVS 79 (172)
T ss_dssp EEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEE
T ss_pred EEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEE
Confidence 45667899999 599999888765432 2 57777664
No 193
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=52.46 E-value=29 Score=23.65 Aligned_cols=42 Identities=7% Similarity=0.006 Sum_probs=26.8
Q ss_pred eCCCcchHHHHHHHHHhCCC-CcEEEEec--cchh-HHHHHHhcCC
Q 033158 61 DGVCNLCNGGVKFVRDNDKN-RRIRYEAL--QSES-GKKLLRRSGR 102 (126)
Q Consensus 61 DG~C~LC~~~V~fl~r~Dr~-~~~~F~~l--QS~~-g~~lL~~~Gl 102 (126)
-..|+.|..++.-+.+.-.+ ..+.++.+ +++. .++..+.+++
T Consensus 57 ~~~C~~C~~~~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2yzh_A 57 SLDTPVCETETKKFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNI 102 (171)
T ss_dssp CTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTC
T ss_pred CCCCCchHHHHHHHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCC
Confidence 46899999999988776433 45666555 3332 3344556655
No 194
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=52.33 E-value=25 Score=23.76 Aligned_cols=47 Identities=11% Similarity=0.256 Sum_probs=32.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-----hhHHHHHHhcCCCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-----ESGKKLLRRSGRAP 104 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-----~~g~~lL~~~Gl~~ 104 (126)
.+|+.--.|+.|....+|+..+.- .+.+.++.. +.-++++...|++.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi--~~~~~di~~~~~~~~el~~~l~~~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRHDV--VFQEHNIMTSPLSRDELLKILSYTENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTC--CEEEEETTTSCCCHHHHHHHHHHCSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC--CeEEEecccCCCcHHHHHHHHhhcCCCH
Confidence 466778889999999999998753 688888732 33334444445443
No 195
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=52.18 E-value=16 Score=25.29 Aligned_cols=34 Identities=12% Similarity=0.037 Sum_probs=23.2
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.|+-..|+.|......+.+.-. ...+.++.+
T Consensus 50 vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 50 CIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3556788899999988877755432 234777666
No 196
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=52.04 E-value=43 Score=22.64 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=35.9
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-----hhHHHHHHhcCCCccC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-----ESGKKLLRRSGRAPDD 106 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-----~~g~~lL~~~Gl~~e~ 106 (126)
..+|+.=-.|+.|....+|+..+.- .+.+.++.. +.-+++++..|++.++
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~gi--~~~~~di~~~~~~~~eL~~~l~~~g~~~~~ 58 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDLAW--DYDAIDIKKNPPAASLIRNWLENSGLELKK 58 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHHTC--CEEEEETTTSCCCHHHHHHHHHHSCCCGGG
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCC--ceEEEEeccCchhHHHHHHHHHHcCCCHHH
Confidence 4567778899999999999998764 588888722 2444566677765443
No 197
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=51.73 E-value=26 Score=23.18 Aligned_cols=36 Identities=8% Similarity=0.189 Sum_probs=26.7
Q ss_pred ccEEEEeCCCcchHHH-HHHHHHhCCC-CcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGG-VKFVRDNDKN-RRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~-V~fl~r~Dr~-~~~~F~~lQS 90 (126)
+.++|.-..|+.|... ..++.+.... -.+...++..
T Consensus 26 ~Vvvf~~~~Cp~C~~alk~~L~~~~~~~i~~~~vdid~ 63 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAALNTLFEKLKVPRSKVLVLQLND 63 (118)
T ss_dssp SEEEEECSSCHHHHHHHHHHHTTSCCCGGGEEEEEGGG
T ss_pred cEEEEEcCCCcCHHHHHHHHHHHcCCCCCCeEEEECcc
Confidence 4677788899999999 8888776521 3567778754
No 198
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=51.49 E-value=15 Score=25.71 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=24.0
Q ss_pred CCCccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 52 PDSRPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 52 ~~~~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
+..-.+.|+-..|+.|...+.-+.+.-. ...+.++.+
T Consensus 48 Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 48 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp TSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3334566788999999988877755432 123666555
No 199
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=51.21 E-value=13 Score=23.74 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=26.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
+.+||.--.||.|.+...++.++.- .+....+..
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~i--~y~~vdI~~ 56 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLGV--DFDYVYVDR 56 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTB--CEEEEEGGG
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCC--CcEEEEeec
Confidence 4556666789999999999988754 577788864
No 200
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=51.20 E-value=15 Score=24.42 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=19.9
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhC
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDND 78 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~D 78 (126)
.-.+.||.-.|+.|......+.+.-
T Consensus 40 ~vlv~F~a~~C~~C~~~~~~l~~l~ 64 (164)
T 2h30_A 40 PTLIKFWASWCPLCLSELGQAEKWA 64 (164)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHH
Confidence 3467788999999999988876654
No 201
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=50.95 E-value=11 Score=27.25 Aligned_cols=36 Identities=6% Similarity=0.002 Sum_probs=27.8
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEecc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQ 89 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQ 89 (126)
.+..++||=.||+|.-..+.+.+.-. .-.+.|.|++
T Consensus 5 ~~I~~~~D~~cPwcyi~~~~l~~~~~~~~~~v~~~p~~ 42 (202)
T 3fz5_A 5 NPIEFWFDFSSGYAFFAAQRIEALAAELGRTVLWRPYM 42 (202)
T ss_dssp SCEEEEECTTCHHHHHHHTTHHHHHHHHTCCEEEEECT
T ss_pred ceeEEEEeCCCHHHHHHHHHHHHHHHHhCCeEEEEeee
Confidence 46789999999999988887755432 3578888874
No 202
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=50.94 E-value=16 Score=28.06 Aligned_cols=60 Identities=7% Similarity=0.110 Sum_probs=41.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||-..|+-|......+.+.-. ...+.|+.+.... ..+...+++ ..+=+++++.+|..
T Consensus 137 vV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I--~~~PTll~~~~G~~ 197 (245)
T 1a0r_P 137 VVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSS--DVLPTLLVYKGGEL 197 (245)
T ss_dssp EEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCT--TTCSEEEEEETTEE
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCC--CCCCEEEEEECCEE
Confidence 466899999999999888866543 2458888887654 334555554 23347777777765
No 203
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=50.80 E-value=15 Score=19.58 Aligned_cols=18 Identities=39% Similarity=0.665 Sum_probs=13.8
Q ss_pred ccceeeeeeeCCCCCCcc
Q 033158 22 SRRTAVVATLSPPKRDKV 39 (126)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~ 39 (126)
|---.+|-||.||+++++
T Consensus 8 R~aSSvFITLapp~r~~a 25 (26)
T 2k9u_B 8 RVASSVFITLAPPRRDVX 25 (26)
T ss_dssp SCEEEEEEEECCSSCCC-
T ss_pred heeeeEEEEecCcccccc
Confidence 344678999999999875
No 204
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=50.41 E-value=9.2 Score=28.69 Aligned_cols=18 Identities=17% Similarity=0.058 Sum_probs=15.8
Q ss_pred ccEEEEeCCCcchHHHHH
Q 033158 55 RPIMLYDGVCNLCNGGVK 72 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~ 72 (126)
..++|+|=.||.|...-.
T Consensus 42 tIvef~Dy~CP~C~~~~~ 59 (226)
T 3f4s_A 42 LMIEYASLTCYHCSLFHR 59 (226)
T ss_dssp EEEEEECTTCHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHH
Confidence 578899999999999865
No 205
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.97 E-value=51 Score=21.54 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=29.9
Q ss_pred ccEEEEeCCCcchH------HHHHHHHHhCCCCcEEEEecc-chhHHHHHHh
Q 033158 55 RPIMLYDGVCNLCN------GGVKFVRDNDKNRRIRYEALQ-SESGKKLLRR 99 (126)
Q Consensus 55 ~~iV~FDG~C~LC~------~~V~fl~r~Dr~~~~~F~~lQ-S~~g~~lL~~ 99 (126)
+.+||.=-.|++|. +..+++..+. -.+...++. ++..++.+..
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~g--i~y~~vdI~~~~~~~~~l~~ 58 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEANK--IEFEEVDITMSEEQRQWMYK 58 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTT--CCEEEEETTTCHHHHHHHHH
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHcC--CCEEEEECCCCHHHHHHHHH
Confidence 45677788999999 7888887754 368888884 4454444443
No 206
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=49.86 E-value=17 Score=26.33 Aligned_cols=36 Identities=8% Similarity=0.020 Sum_probs=24.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQS 90 (126)
-.+.|+-..|+.|......+.+.-. ...+.++.+..
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~ 100 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINS 100 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 3566788999999998887755432 23377766644
No 207
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=49.81 E-value=17 Score=27.08 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=33.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC------CCcEEEEeccchhHHHHHHhcCC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK------NRRIRYEALQSESGKKLLRRSGR 102 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr------~~~~~F~~lQS~~g~~lL~~~Gl 102 (126)
.++||--.|+.|...+..+.+.-. .+.+.+..+......++.+.+|+
T Consensus 142 vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V 194 (243)
T 2hls_A 142 IETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGV 194 (243)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCC
Confidence 355889999999999998866321 14688877765544556677776
No 208
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=49.33 E-value=28 Score=30.01 Aligned_cols=60 Identities=7% Similarity=0.058 Sum_probs=43.0
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||--.|+-|.....-+.+... ++++.|+.+.......+.+.+|+.. +=+++++.+|.
T Consensus 459 lv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~--~Pt~~~~~~g~ 520 (780)
T 3apo_A 459 LVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQA--YPTTVVFNQSS 520 (780)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS--SSEEEEEETTE
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCc--CCeEEEEcCCc
Confidence 456788899999998877765443 3578888887666666888999853 44666666654
No 209
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=49.18 E-value=33 Score=24.92 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=33.2
Q ss_pred CCccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-hhHHHHHHhcC
Q 033158 53 DSRPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-ESGKKLLRRSG 101 (126)
Q Consensus 53 ~~~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-~~g~~lL~~~G 101 (126)
..+.+++.--.|++|.+...++.++.- .+...++.. +..+++.+.+|
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~~i--~~~~~~i~~~~~~~~l~~~~g 216 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDKGL--SFEEIILGHDATIVSVRAVSG 216 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHTC--CCEEEETTTTCCHHHHHHHTC
T ss_pred cceEEEEECCCChHHHHHHHHHHHcCC--ceEEEECCCchHHHHHHHHhC
Confidence 445677778899999999999988754 577777743 33344555555
No 210
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=49.15 E-value=24 Score=28.34 Aligned_cols=60 Identities=3% Similarity=0.088 Sum_probs=43.3
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||-..|+-|.....-+.+... .+.+.|+.+.-....++.+++|+. ..=++++..+|+
T Consensus 25 lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~--~~Ptl~~~~~g~ 86 (481)
T 3f8u_A 25 LVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVS--GYPTLKIFRDGE 86 (481)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCC--EESEEEEEETTE
T ss_pred EEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCC--CCCEEEEEeCCc
Confidence 567899999999998877755542 344888888766666788888874 223777777664
No 211
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=49.06 E-value=12 Score=24.63 Aligned_cols=34 Identities=12% Similarity=0.327 Sum_probs=23.5
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.||...|+.|......+.+.-. ...+.++.+
T Consensus 29 vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v 65 (151)
T 2f9s_A 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAV 65 (151)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 4566889999999998887755432 124666555
No 212
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=48.88 E-value=36 Score=23.08 Aligned_cols=50 Identities=18% Similarity=0.294 Sum_probs=35.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc-----chhHHHHHHhcCCCccC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ-----SESGKKLLRRSGRAPDD 106 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-----S~~g~~lL~~~Gl~~e~ 106 (126)
..+|+.=-.|+.|.+..+|+..+.- .+.+.++. .+.-+++++..|++.++
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~~~gi--~~~~~di~~~~~~~~eL~~~l~~~g~~~~~ 59 (120)
T 3gkx_A 5 KTLFLQYPACSTCQKAKKWLIENNI--EYTNRLIVDDNPTVEELKAWIPLSGLPVKK 59 (120)
T ss_dssp CCEEEECTTCHHHHHHHHHHHHTTC--CCEEEETTTTCCCHHHHHHHHHHHTSCGGG
T ss_pred EEEEEECCCChHHHHHHHHHHHcCC--ceEEEecccCcCCHHHHHHHHHHcCCCHHH
Confidence 4677888899999999999998754 57777772 23334456666765443
No 213
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=48.18 E-value=49 Score=22.30 Aligned_cols=42 Identities=7% Similarity=0.024 Sum_probs=26.0
Q ss_pred eCCCcchHHHHHHHHHhCCC-CcEEEEec--cchh-HHHHHHhcCC
Q 033158 61 DGVCNLCNGGVKFVRDNDKN-RRIRYEAL--QSES-GKKLLRRSGR 102 (126)
Q Consensus 61 DG~C~LC~~~V~fl~r~Dr~-~~~~F~~l--QS~~-g~~lL~~~Gl 102 (126)
-..|+.|..++.-+.+.-.+ ..+.+..+ +++. .++..+.+|+
T Consensus 52 ~~~c~~C~~~~~~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 97 (163)
T 1psq_A 52 SIDTGICSTQTRRFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGL 97 (163)
T ss_dssp CTTSHHHHHHHHHHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCC
Confidence 36899999999888775432 45666555 3332 2334555555
No 214
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=48.12 E-value=32 Score=23.34 Aligned_cols=36 Identities=8% Similarity=0.197 Sum_probs=27.5
Q ss_pred ccEEEEeCCCcchHHH-HHHHHHhCCC-CcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGG-VKFVRDNDKN-RRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~-V~fl~r~Dr~-~~~~F~~lQS 90 (126)
+.+||.=..||+|.+. ..++.++... -.+.+.++..
T Consensus 38 ~Vvvy~~~~Cp~C~~a~k~~L~~~~~~~i~~~~vdvd~ 75 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKATLSTLFQELNVPKSKALVLELDE 75 (129)
T ss_dssp SEEEEECTTCHHHHHHHHHHHTTSCCCGGGEEEEEGGG
T ss_pred CEEEEECCCCCchHHHHHHHHHhcCccCCCcEEEEccc
Confidence 5677788889999999 8888776521 3678888854
No 215
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=46.40 E-value=30 Score=22.94 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=22.2
Q ss_pred EEEE-eCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 57 IMLY-DGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 57 iV~F-DG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
+.|| -..|+.|......+.+.-. ...+.++.+
T Consensus 41 l~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~i 76 (160)
T 1xvw_A 41 LVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAI 76 (160)
T ss_dssp EEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEE
T ss_pred EEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEE
Confidence 4455 7789999999988876542 235666665
No 216
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=46.30 E-value=25 Score=23.38 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=23.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQ 89 (126)
-.+.|+-..|+.|...+.-+.+.-. ...+.++.+.
T Consensus 35 vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs 72 (170)
T 2p5q_A 35 LLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFP 72 (170)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEE
Confidence 3566788999999998877755432 1247777663
No 217
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=46.12 E-value=18 Score=30.02 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=36.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl 102 (126)
..++|+=-.|+.|...+..+.+... ..++.|.-+.....+++.+++|+
T Consensus 120 ~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i 168 (521)
T 1hyu_A 120 EFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNV 168 (521)
T ss_dssp EEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTC
T ss_pred ceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhHHHHHHhCC
Confidence 3456668899999999998866432 24799988877777778888886
No 218
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=45.12 E-value=36 Score=26.29 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=37.0
Q ss_pred cEEEEeCCCcchHHH-----------HHHHHHhCCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGG-----------VKFVRDNDKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~-----------V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||--.|+ |... .+....... ..+.|+.+.-..-.++.+++|+. ..=+++++.+|+
T Consensus 32 lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~-~~v~~~~Vd~~~~~~l~~~~~v~--~~Pt~~~~~~g~ 100 (350)
T 1sji_A 32 CLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEH-KDIGFVMVDAKKEAKLAKKLGFD--EEGSLYVLKGDR 100 (350)
T ss_dssp EEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGG-SSEEEEEEETTTTHHHHHHHTCC--STTEEEEEETTE
T ss_pred EEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhh-cCcEEEEEeCCCCHHHHHhcCCC--ccceEEEEECCc
Confidence 4668999999 9543 222233322 26889888666656678888864 334666666665
No 219
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=44.80 E-value=30 Score=24.00 Aligned_cols=49 Identities=10% Similarity=-0.073 Sum_probs=30.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEeccc-----------hhHHHHHHhcCCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQS-----------ESGKKLLRRSGRA 103 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQS-----------~~g~~lL~~~Gl~ 103 (126)
-.+.|+-..|+.|......+.+.-. ...+.++.+.. +..++.++.+|++
T Consensus 52 vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~ 114 (185)
T 2gs3_A 52 CIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVK 114 (185)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCC
T ss_pred EEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCC
Confidence 3556788899999988877755432 23477777631 2345555666653
No 220
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=44.67 E-value=28 Score=30.04 Aligned_cols=60 Identities=12% Similarity=0.103 Sum_probs=41.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+.||.-.|+-|......+.+... ++++.|+.+.......+.+.+|+. .+=+++++.+|+
T Consensus 679 ~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v~--~~Pt~~~~~~g~ 740 (780)
T 3apo_A 679 VVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIK--AYPSVKLYQYER 740 (780)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCC--SSSEEEEEEEET
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCCC--cCCEEEEEcCCC
Confidence 455788999999998877655432 347888888776666677888874 334666555554
No 221
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=44.29 E-value=19 Score=23.67 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=26.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ 89 (126)
+.+||.=-.||+|.+..+++.++.- .+....+.
T Consensus 18 ~v~vy~~~~Cp~C~~ak~~L~~~~i--~~~~~dvd 50 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRVKELFSSLGV--ECNVLELD 50 (114)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHTTC--CCEEEETT
T ss_pred CEEEEEcCCCCcHHHHHHHHHHcCC--CcEEEEec
Confidence 4666667789999999999988754 57777775
No 222
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=50.11 E-value=4.8 Score=26.16 Aligned_cols=61 Identities=16% Similarity=0.326 Sum_probs=35.7
Q ss_pred cEEEEeCCCcchHHHHHHH---HHhCC--CCcEEEEeccc--hhHHHHHHhcCCCccCCcEEEEE--ECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFV---RDNDK--NRRIRYEALQS--ESGKKLLRRSGRAPDDISSVVLV--EKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl---~r~Dr--~~~~~F~~lQS--~~g~~lL~~~Gl~~e~~dsvllv--~~Gr~ 118 (126)
.+.||.-.|+.|......+ .+... .+++.|+.+.- +...++.+.+|+. .+=+++++ ++|+.
T Consensus 23 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~--~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 23 MVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVP--GTPTFVFLVPKAGAW 92 (130)
Confidence 4558899999999988666 33222 23466665543 4445566676652 22355565 34543
No 223
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=49.29 E-value=5 Score=26.11 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=18.3
Q ss_pred ccEEEEeCCCcchHHHHHHHHHh
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDN 77 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~ 77 (126)
-.+.|+-..|+.|......+.+.
T Consensus 29 vll~F~a~wC~~C~~~~~~l~~~ 51 (143)
T 2lus_A 29 IGFYFSAHWCPPCRGFTPILADM 51 (143)
Confidence 35668889999999988877654
No 224
>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete chrysosporium}
Probab=42.83 E-value=41 Score=27.01 Aligned_cols=47 Identities=11% Similarity=0.197 Sum_probs=33.0
Q ss_pred eeecccCCCCCCCccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEec
Q 033158 42 WVDATSSFFEPDSRPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEAL 88 (126)
Q Consensus 42 ~~~~~~~~~~~~~~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~l 88 (126)
|+++.++|=..+++..|+.--.||+|++..-.+..+.-...|.+..+
T Consensus 64 ~i~~~~~~~~e~gry~Ly~s~~CP~a~Rv~i~l~lKGL~~~I~v~~v 110 (352)
T 3ppu_A 64 WIQPNGDFTPEKGRYHLYVSYACPWATRTLIVRKLKGLEDFIGVTVV 110 (352)
T ss_dssp CCCSSSSSCCCTTSEEEEECSSCHHHHHHHHHHHHTTCTTTSEEEEC
T ss_pred ccCCCCCCCCCCCcEEEEEeCCCchHHHHHHHHHHcCCCceeEEEEe
Confidence 77655555445668888889999999998777766555556655443
No 225
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.21 E-value=24 Score=23.42 Aligned_cols=58 Identities=9% Similarity=0.128 Sum_probs=39.0
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|......+.+.-. ...+.|+.+..... .+.+++ ..+=+++++.+|+.
T Consensus 34 vv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~---~~~~~i--~~~Pt~~~~~~G~~ 92 (135)
T 2dbc_A 34 VIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSC---IEHYHD--NCLPTIFVYKNGQI 92 (135)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSS---CSSCCS--SCCSEEEEESSSSC
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcC---cccCCC--CCCCEEEEEECCEE
Confidence 456888999999999888766543 24688888865442 144554 23347777777765
No 226
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=42.08 E-value=42 Score=22.71 Aligned_cols=42 Identities=7% Similarity=0.080 Sum_probs=27.1
Q ss_pred eCCCcchHHHHHHHHHhCCCCcEEEEec--cch-hHHHHHHhcCC
Q 033158 61 DGVCNLCNGGVKFVRDNDKNRRIRYEAL--QSE-SGKKLLRRSGR 102 (126)
Q Consensus 61 DG~C~LC~~~V~fl~r~Dr~~~~~F~~l--QS~-~g~~lL~~~Gl 102 (126)
-..|+.|..+..-+.+.-.+..+.++.+ +++ ..++..+.+|+
T Consensus 56 ~~~c~~C~~~~~~l~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 56 SIDTGVCDQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp CTTSHHHHHHHHHHHHHSCTTTSEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHhhcCCCEEEEEECCCHHHHHHHHHHcCC
Confidence 4579999999998877765455666555 332 23344556665
No 227
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=41.90 E-value=22 Score=24.65 Aligned_cols=34 Identities=6% Similarity=0.156 Sum_probs=23.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.|+-..|+.|...+.-+.+.-. ...+.++.+
T Consensus 52 vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~v 88 (181)
T 2p31_A 52 SLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAF 88 (181)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 3566788899999998877755422 224777666
No 228
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=40.68 E-value=93 Score=21.88 Aligned_cols=61 Identities=15% Similarity=0.222 Sum_probs=47.7
Q ss_pred cEEEEeC-CC--cchHHHHHHHHHhCC--CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDG-VC--NLCNGGVKFVRDNDK--NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG-~C--~LC~~~V~fl~r~Dr--~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+|.|=+ .| +=|....-.+.+... .++++|+-+.-+..+++-.+||+ ..+=++++..+|+.
T Consensus 36 vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV--~siPTlilFkdG~~ 101 (137)
T 2qsi_A 36 VVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGV--AVCPSLAVVQPERT 101 (137)
T ss_dssp EEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTC--CSSSEEEEEECCEE
T ss_pred EEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCC--ccCCEEEEEECCEE
Confidence 4555555 88 999999888866544 47899999998888899999997 34458888888875
No 229
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=39.74 E-value=20 Score=23.38 Aligned_cols=35 Identities=9% Similarity=0.332 Sum_probs=24.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHH----hC--CCCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRD----ND--KNRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r----~D--r~~~~~F~~lQ 89 (126)
-.+.||-..|+.|......+.+ .+ +...+.++.+.
T Consensus 34 vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~ 74 (142)
T 3eur_A 34 TLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIY 74 (142)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEE
Confidence 3456788899999999888776 11 12467776663
No 230
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=39.66 E-value=64 Score=22.06 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=22.4
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC---CCCcEEEEec
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND---KNRRIRYEAL 88 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D---r~~~~~F~~l 88 (126)
.+.|+=..|+.|......+.+.- +...+.++.+
T Consensus 42 lv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 42 LVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 34456788999999887775543 2334777776
No 231
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=39.53 E-value=46 Score=22.16 Aligned_cols=52 Identities=12% Similarity=0.106 Sum_probs=29.2
Q ss_pred CCCccEEEEeCCCc-chHHHHHHHHHh----CCCC-cEEEEeccc-------hhHHHHHHhcCCC
Q 033158 52 PDSRPIMLYDGVCN-LCNGGVKFVRDN----DKNR-RIRYEALQS-------ESGKKLLRRSGRA 103 (126)
Q Consensus 52 ~~~~~iV~FDG~C~-LC~~~V~fl~r~----Dr~~-~~~F~~lQS-------~~g~~lL~~~Gl~ 103 (126)
+..-.+.|+-..|+ .|......+.+. ..++ ++.++.+.. +..++.++.+|++
T Consensus 33 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~ 97 (174)
T 1xzo_A 33 GEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLS 97 (174)
T ss_dssp TCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCC
T ss_pred CCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33345668889999 997666655443 2222 455555532 2334555666654
No 232
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=38.72 E-value=46 Score=22.53 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=34.2
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc-----chhHHHHHHhcCC-Ccc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ-----SESGKKLLRRSGR-APD 105 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-----S~~g~~lL~~~Gl-~~e 105 (126)
.+|+.=-.|+.|.+..+|+..+.- .+.+.++. .+.-+++++..|. +..
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~~gi--~~~~~di~~~~~~~~eL~~~l~~~g~~~~~ 60 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQQGI--TPQVVLYLETPPSVDKLKELLQQLGFSDAR 60 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHTTTC--CCEEECTTTSCCCHHHHHHHHHHTTCSSGG
T ss_pred EEEEECCCCHHHHHHHHHHHHcCC--CcEEEeeccCCCcHHHHHHHHHhcCCcCHH
Confidence 567778899999999999988654 57777773 2344456667776 443
No 233
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=37.50 E-value=67 Score=22.70 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=39.0
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCC-ccCCcEEEEEEC-Cch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRA-PDDISSVVLVEK-DRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~-~e~~dsvllv~~-Gr~ 118 (126)
.+.|+=-.||-|....-.+.+.-. .+++.|.-+.-+...++.+.++-. ...+=+++++++ |+.
T Consensus 58 vv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 58 LLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 455667789999999988876532 346778777655555555555410 122336677764 443
No 234
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=37.34 E-value=78 Score=21.00 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=32.9
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCCCcEEEEecc--c---hhHHHHHHhcC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQ--S---ESGKKLLRRSG 101 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQ--S---~~g~~lL~~~G 101 (126)
.+|+.=-.|+.|....+|+..+.- .+.+.++. . +..+++++..|
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~gi--~y~~~di~~~~~~~~~l~~~~~~~g 55 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDHGI--DYTFHDYKKEGLDAETLDRFLKTVP 55 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHTC--CEEEEEHHHHCCCHHHHHHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHcCC--cEEEEeeeCCCCCHHHHHHHHHHcC
Confidence 466667899999999999998764 67888883 3 44445567777
No 235
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=37.02 E-value=58 Score=21.46 Aligned_cols=44 Identities=7% Similarity=0.200 Sum_probs=31.3
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc-----hhHHHHHHhcC
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS-----ESGKKLLRRSG 101 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS-----~~g~~lL~~~G 101 (126)
.+|+.=-.|+.|....+|+..+.- .+.+.++.. +.-+++++..|
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~gi--~~~~~di~~~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEHKV--AYDFHDYKAVGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTC--CEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--ceEEEeecCCCCCHHHHHHHHHhCC
Confidence 356667789999999999998654 688888842 33344555555
No 236
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=36.27 E-value=91 Score=21.49 Aligned_cols=17 Identities=0% Similarity=-0.470 Sum_probs=12.9
Q ss_pred eCCCcchHHHHHHHHHh
Q 033158 61 DGVCNLCNGGVKFVRDN 77 (126)
Q Consensus 61 DG~C~LC~~~V~fl~r~ 77 (126)
-..|+.|..++.-+.+.
T Consensus 61 ~~~c~~C~~el~~l~~l 77 (179)
T 3ixr_A 61 KDNTPGSSTEGLEFNLL 77 (179)
T ss_dssp CTTSHHHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHH
Confidence 34699999988777554
No 237
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=35.70 E-value=88 Score=20.74 Aligned_cols=31 Identities=13% Similarity=-0.066 Sum_probs=19.9
Q ss_pred eCCCcchHHHHHHHHHh----CCCCcEEEEeccch
Q 033158 61 DGVCNLCNGGVKFVRDN----DKNRRIRYEALQSE 91 (126)
Q Consensus 61 DG~C~LC~~~V~fl~r~----Dr~~~~~F~~lQS~ 91 (126)
-..|+.|..++.-+.+. ..++.+-.++.+++
T Consensus 45 ~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~ 79 (159)
T 2a4v_A 45 RASTPGSTRQASGFRDNYQELKEYAAVFGLSADSV 79 (159)
T ss_dssp SSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCH
Confidence 56899999998776552 22335666665543
No 238
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=35.15 E-value=1.2e+02 Score=21.39 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=26.9
Q ss_pred ccEEEEeC----------CCcchHHHHHHHHHhCCCCcEEEEeccchhHHHHHHhcCC
Q 033158 55 RPIMLYDG----------VCNLCNGGVKFVRDNDKNRRIRYEALQSESGKKLLRRSGR 102 (126)
Q Consensus 55 ~~iV~FDG----------~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~Gl 102 (126)
++|+|||- .||+|.+..-.|.-+.- .++.+.+.-..-...+...|.
T Consensus 3 ~pi~lYd~~~~~~~~~~~~SP~~~kvr~~L~~kgi--~y~~~~v~~~~~~~~~~~~g~ 58 (253)
T 4f03_A 3 QPIVFYDIPSNERIKHSPWSPNTWKIRYALNYKGL--KYKTEWVEYPDIAGVVQKLGG 58 (253)
T ss_dssp CCEEEEECCCCGGGTTCCCCHHHHHHHHHHHHHTC--CEEEEECCGGGHHHHHHHHTC
T ss_pred CCeEEeecCCCCCCCCCCcChhHHHHHHHHHHcCC--CCEEEEEccccchhhhhhcCC
Confidence 47999993 38899887655544332 455555544433344445443
No 239
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=34.75 E-value=28 Score=26.05 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=25.8
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC------CCCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND------KNRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D------r~~~~~F~~l 88 (126)
++.++||=.||+|.-.-+.+.+.- ..-.+.|.|+
T Consensus 4 ~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~ 43 (239)
T 3gl5_A 4 RVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSF 43 (239)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEEC
T ss_pred EEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEe
Confidence 578999999999998888887631 1235777776
No 240
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=32.89 E-value=30 Score=25.15 Aligned_cols=22 Identities=9% Similarity=0.258 Sum_probs=18.1
Q ss_pred CCccEEEEeCCCcchHHHHHHH
Q 033158 53 DSRPIMLYDGVCNLCNGGVKFV 74 (126)
Q Consensus 53 ~~~~iV~FDG~C~LC~~~V~fl 74 (126)
+...+-|||=.||.|....-.+
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~ 135 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVL 135 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTS
T ss_pred CCEEEEEECCCChhHHHhCccc
Confidence 4467889999999999998554
No 241
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=32.57 E-value=75 Score=26.92 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=41.3
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCCC-----C-----cEEEEeccchhHHHHHHhcCCCccCCcEEEEEE
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDKN-----R-----RIRYEALQSESGKKLLRRSGRAPDDISSVVLVE 114 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr~-----~-----~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~ 114 (126)
.+.||=-.|+-|......+.+.... + ++.|+.+.-....++.+.+|+. .+=+++++.
T Consensus 46 lV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~--~~PTlilf~ 112 (470)
T 3qcp_A 46 IVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDIN--FVPRLFFFY 112 (470)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCC--SSCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCC--ccCeEEEEE
Confidence 4668899999999988777655322 2 5889888766667788898863 445776664
No 242
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=32.50 E-value=1.4e+02 Score=23.25 Aligned_cols=59 Identities=10% Similarity=0.024 Sum_probs=39.5
Q ss_pred cEEEEeCCCc-chHHHHHHHHHh--CCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEE
Q 033158 56 PIMLYDGVCN-LCNGGVKFVRDN--DKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVE 114 (126)
Q Consensus 56 ~iV~FDG~C~-LC~~~V~fl~r~--Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~ 114 (126)
.+++|+.+|. -|..+...+.+. +.++++.|+-+........++.+|++.++.-.+++..
T Consensus 240 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~ 301 (382)
T 2r2j_A 240 LILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDS 301 (382)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTCCGGGCSEEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCCCccCCCEEEEEc
Confidence 3778888763 344454555442 2246899999988777778899999876654554444
No 243
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=31.98 E-value=68 Score=21.29 Aligned_cols=57 Identities=9% Similarity=0.128 Sum_probs=40.0
Q ss_pred EEEEeCCCcchHHHHHHHHHhCC-CCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 57 IMLYDGVCNLCNGGVKFVRDNDK-NRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 57 iV~FDG~C~LC~~~V~fl~r~Dr-~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
+-||--.|+-|......+.+... ...++|+-+..+.. .+++++ ..+=++++..+|+.
T Consensus 28 v~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v--~~~PT~~~fk~G~~ 85 (118)
T 3evi_A 28 IHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHD--NCLPTIFVYKNGQI 85 (118)
T ss_dssp EEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCG--GGCSEEEEEETTEE
T ss_pred EEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCC--CCCCEEEEEECCEE
Confidence 45899999999999888876543 24688888876552 245443 34447888888875
No 244
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=31.75 E-value=61 Score=21.84 Aligned_cols=47 Identities=11% Similarity=0.166 Sum_probs=33.6
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEec-----cchhHHHHHHhcCCC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEAL-----QSESGKKLLRRSGRA 103 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~l-----QS~~g~~lL~~~Gl~ 103 (126)
+.+++.=-.|+.|....+|+..+.- .+.+.++ ..+.-+++++..|.+
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~~~gi--~~~~~di~~~~~t~~eL~~~l~~~g~~ 56 (119)
T 3f0i_A 5 SVVIYHNPKCSKSRETLALLENQGI--APQVIKYLETSPSVEELKRLYQQLGLN 56 (119)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHTTC--CCEEECHHHHCCCHHHHHHHHHHHTCS
T ss_pred EEEEEECCCChHHHHHHHHHHHcCC--ceEEEEeccCcCcHHHHHHHHHHcCCc
Confidence 4567778899999999999998653 5777776 223444556666765
No 245
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=29.61 E-value=70 Score=20.92 Aligned_cols=22 Identities=14% Similarity=0.079 Sum_probs=16.4
Q ss_pred cEEEEeCCCcc-hHHHHHHHHHh
Q 033158 56 PIMLYDGVCNL-CNGGVKFVRDN 77 (126)
Q Consensus 56 ~iV~FDG~C~L-C~~~V~fl~r~ 77 (126)
.+.|+-..|+- |......+.+.
T Consensus 27 ll~f~~~~C~~~C~~~~~~l~~l 49 (164)
T 2ggt_A 27 LIYFGFTHCPDVCPEELEKMIQV 49 (164)
T ss_dssp EEEEECTTCSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCchhHHHHHHHHHH
Confidence 45567889996 99888766543
No 246
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=28.60 E-value=59 Score=20.22 Aligned_cols=57 Identities=11% Similarity=0.183 Sum_probs=34.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC--C-----CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECC
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK--N-----RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKD 116 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr--~-----~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~G 116 (126)
-.+.||--.|+.|......+.+.-. . .++.|+.+...... +.. ++ ..+=+++++++|
T Consensus 28 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~-~v--~~~Pt~~~~~~~ 91 (121)
T 2djj_A 28 VLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND--VPD-EI--QGFPTIKLYPAG 91 (121)
T ss_dssp EEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC--CSS-CC--SSSSEEEEECSS
T ss_pred EEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc--ccc-cc--CcCCeEEEEeCc
Confidence 3577899999999998877755321 1 26788777543321 112 22 223366776644
No 247
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=28.32 E-value=88 Score=21.51 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=28.2
Q ss_pred CCCCcEEEEeccc--hhHHHHHHhcCCCccCCcEEEEEE
Q 033158 78 DKNRRIRYEALQS--ESGKKLLRRSGRAPDDISSVVLVE 114 (126)
Q Consensus 78 Dr~~~~~F~~lQS--~~g~~lL~~~Gl~~e~~dsvllv~ 114 (126)
+-++++.|+-+.. +.....++.+|++.+++-.+.+++
T Consensus 60 ~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~ 98 (147)
T 3bj5_A 60 SFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLIT 98 (147)
T ss_dssp TTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEE
T ss_pred HcCCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEe
Confidence 3457899999988 676678999999987766665554
No 248
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=28.00 E-value=47 Score=21.94 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=23.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQ 89 (126)
-.+.|+-..|+.|......+.+.-. ...+.++.+.
T Consensus 34 vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 71 (169)
T 2v1m_A 34 CLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFP 71 (169)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 3456788899999988877754321 2347776663
No 249
>1ews_A RK-1 defensin, alpha-defisin; alpha defensin, triple-stranded beta-sheet, antimicrobial protein; NMR {Oryctolagus cuniculus} SCOP: g.9.1.1
Probab=27.77 E-value=15 Score=20.15 Aligned_cols=14 Identities=43% Similarity=0.805 Sum_probs=10.8
Q ss_pred ccEEEEeCCCcchH
Q 033158 55 RPIMLYDGVCNLCN 68 (126)
Q Consensus 55 ~~iV~FDG~C~LC~ 68 (126)
+|.-+.||.|+|=|
T Consensus 10 dpwevidgscglfn 23 (32)
T 1ews_A 10 DPWEVIDGSCGLFN 23 (32)
T ss_dssp CTTEEEEECCSSSS
T ss_pred Chhheecccccccc
Confidence 46678899999844
No 250
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=27.59 E-value=29 Score=23.23 Aligned_cols=9 Identities=0% Similarity=-0.130 Sum_probs=7.8
Q ss_pred EeCCCcchH
Q 033158 60 YDGVCNLCN 68 (126)
Q Consensus 60 FDG~C~LC~ 68 (126)
||.+|.||.
T Consensus 1 ~~~~CiFC~ 9 (119)
T 3n1s_A 1 MAEETIFSK 9 (119)
T ss_dssp CCCCCHHHH
T ss_pred CCCCChhhh
Confidence 578999997
No 251
>1dt9_A ERF1, protein (eukaryotic peptide chain release factor subunit 1); tRNA mimicry, protein sythesis, STOP codon recognition, peptidyl-tRNA hydrolysis; 2.70A {Homo sapiens} SCOP: c.55.4.2 d.79.3.2 d.91.1.1 PDB: 3e1y_A* 2ktu_A 2ktv_A 2lgt_A 2hst_A
Probab=27.51 E-value=59 Score=26.77 Aligned_cols=39 Identities=10% Similarity=0.191 Sum_probs=23.9
Q ss_pred CCcchHHH---------HHHHHHh--CCCCcEEEEeccchhHHHHHHhcC
Q 033158 63 VCNLCNGG---------VKFVRDN--DKNRRIRYEALQSESGKKLLRRSG 101 (126)
Q Consensus 63 ~C~LC~~~---------V~fl~r~--Dr~~~~~F~~lQS~~g~~lL~~~G 101 (126)
.||.|... +.++... +..+.+.|++-.++.|+++++.+|
T Consensus 358 ~~~~~g~~~~~~~~~d~ve~L~e~~~~~G~~V~ivs~~~e~G~q~l~~~g 407 (437)
T 1dt9_A 358 TDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFG 407 (437)
T ss_dssp C-----------CCCBHHHHHHHTCTTTTSCEEEECSSSHHHHHHHHTTT
T ss_pred cCcccCccccccccccHHHHHHHHHHHcCCEEEEECCCChhHHHHHHhCC
Confidence 48899874 5566553 346899999999999998777665
No 252
>2js3_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural G PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris}
Probab=27.44 E-value=1.1 Score=30.48 Aligned_cols=19 Identities=37% Similarity=0.962 Sum_probs=16.3
Q ss_pred eC----CCcchHHHHHHHHHhCC
Q 033158 61 DG----VCNLCNGGVKFVRDNDK 79 (126)
Q Consensus 61 DG----~C~LC~~~V~fl~r~Dr 79 (126)
|| .|.+|+++|-|+..-|-
T Consensus 49 dGGA~NqCklC~ASVpWl~tGDe 71 (96)
T 2js3_A 49 DGGAHNQCKLCGASVPWLQTGDE 71 (96)
T ss_dssp SSCEEEEETTSSCEEETTCCCSS
T ss_pred hCCccccCcccCccchhhhcCcc
Confidence 67 89999999999987763
No 253
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=27.37 E-value=40 Score=22.89 Aligned_cols=28 Identities=7% Similarity=0.082 Sum_probs=18.0
Q ss_pred eCCCcchHHHHHHHHHhCCC-CcEEEEec
Q 033158 61 DGVCNLCNGGVKFVRDNDKN-RRIRYEAL 88 (126)
Q Consensus 61 DG~C~LC~~~V~fl~r~Dr~-~~~~F~~l 88 (126)
-..|+.|..++.-+.+.-.+ ..+.+..+
T Consensus 53 ~~~c~~C~~e~~~l~~~~~~~~~v~vv~I 81 (165)
T 1q98_A 53 SIDTGVCATSVRKFNQQAAKLSNTIVLCI 81 (165)
T ss_dssp CSCSSCCCHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCCCCccHHHHHHHHHHHHHcCCCEEEEE
Confidence 56899999998777553211 34555554
No 254
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=27.11 E-value=2e+02 Score=21.62 Aligned_cols=62 Identities=6% Similarity=0.063 Sum_probs=37.8
Q ss_pred cEEEEe---CCCcchHHHHHHHHHhCCCCcEEEEecc-c----hhHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 56 PIMLYD---GVCNLCNGGVKFVRDNDKNRRIRYEALQ-S----ESGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 56 ~iV~FD---G~C~LC~~~V~fl~r~Dr~~~~~F~~lQ-S----~~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
.+|.|. -+|++.-.+-+........+++.|+.+. + ..-.++.+.+|+..+.+=+++++.+|.
T Consensus 25 vlV~FyA~~pWCgl~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~ 94 (240)
T 2qc7_A 25 VLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGD 94 (240)
T ss_dssp EEEEECCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTC
T ss_pred EEEEEeCCCCCCcchHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCC
Confidence 344455 5677544444444454434679998887 2 223557888988643555787777665
No 255
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=27.07 E-value=1.6e+02 Score=22.32 Aligned_cols=24 Identities=8% Similarity=0.214 Sum_probs=16.6
Q ss_pred CccEEEE---eCCCcchHHHHHHHHHh
Q 033158 54 SRPIMLY---DGVCNLCNGGVKFVRDN 77 (126)
Q Consensus 54 ~~~iV~F---DG~C~LC~~~V~fl~r~ 77 (126)
++.+|+| --.|+.|..+..-+.++
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l 59 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARR 59 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHT
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHH
Confidence 4445544 35799999998877654
No 256
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=26.81 E-value=63 Score=21.82 Aligned_cols=15 Identities=13% Similarity=0.086 Sum_probs=12.2
Q ss_pred cEEEEeCCCcchHHH
Q 033158 56 PIMLYDGVCNLCNGG 70 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~ 70 (126)
.+.|+--.|+-|...
T Consensus 51 lv~F~A~WC~~C~~~ 65 (172)
T 3f9u_A 51 MLDFTGYGCVNCRKM 65 (172)
T ss_dssp EEEEECTTCHHHHHH
T ss_pred EEEEECCCCHHHHHH
Confidence 345789999999986
No 257
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=26.70 E-value=1.7e+02 Score=20.68 Aligned_cols=43 Identities=14% Similarity=0.062 Sum_probs=24.5
Q ss_pred eCCCcchHH-HHHHHHHhC-----CCCc-EEEEeccchh-HHHHHHhcCCC
Q 033158 61 DGVCNLCNG-GVKFVRDND-----KNRR-IRYEALQSES-GKKLLRRSGRA 103 (126)
Q Consensus 61 DG~C~LC~~-~V~fl~r~D-----r~~~-~~F~~lQS~~-g~~lL~~~Gl~ 103 (126)
=..|+.|.. ++.-+.+.- +.-. +.-++.+++. .++..+++|++
T Consensus 66 a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~ 116 (184)
T 3uma_A 66 GAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGM 116 (184)
T ss_dssp CTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCT
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCC
Confidence 458999999 777665542 2223 5555555532 33445555554
No 258
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=26.61 E-value=28 Score=23.39 Aligned_cols=23 Identities=9% Similarity=0.322 Sum_probs=16.9
Q ss_pred ccEEEEeCC-CcchHHHHHHHHHh
Q 033158 55 RPIMLYDGV-CNLCNGGVKFVRDN 77 (126)
Q Consensus 55 ~~iV~FDG~-C~LC~~~V~fl~r~ 77 (126)
-.+.||-.. |+.|......+.+.
T Consensus 47 ~vl~F~~~~~C~~C~~~~~~l~~l 70 (167)
T 2jsy_A 47 TIISVIPSIDTGVCDAQTRRFNEE 70 (167)
T ss_dssp EEEEECSCSTTSHHHHTHHHHHHH
T ss_pred EEEEEecCCCCCchHHHHHHHHHH
Confidence 345567787 99999988777554
No 259
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=26.50 E-value=1.6e+02 Score=20.25 Aligned_cols=43 Identities=9% Similarity=-0.064 Sum_probs=24.6
Q ss_pred eCCCcchHH-HHHHHHHhC-----CCC-cEEEEeccchh-HHHHHHhcCCC
Q 033158 61 DGVCNLCNG-GVKFVRDND-----KNR-RIRYEALQSES-GKKLLRRSGRA 103 (126)
Q Consensus 61 DG~C~LC~~-~V~fl~r~D-----r~~-~~~F~~lQS~~-g~~lL~~~Gl~ 103 (126)
-..|+.|.. ++.-+.+.- +.- .+-.++.+++. .++..+.+|++
T Consensus 41 a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~ 91 (167)
T 2wfc_A 41 GAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGAD 91 (167)
T ss_dssp CTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 457999999 877665421 222 44445555543 34455666654
No 260
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=26.37 E-value=1e+02 Score=20.23 Aligned_cols=33 Identities=6% Similarity=0.004 Sum_probs=21.3
Q ss_pred cEEEEeCCCcc-hHHHHHHHHHhCC-------CCcEEEEec
Q 033158 56 PIMLYDGVCNL-CNGGVKFVRDNDK-------NRRIRYEAL 88 (126)
Q Consensus 56 ~iV~FDG~C~L-C~~~V~fl~r~Dr-------~~~~~F~~l 88 (126)
.+.|+-..|+- |......+.+.-. ...+.++.+
T Consensus 30 ll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~i 70 (171)
T 2rli_A 30 LMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFI 70 (171)
T ss_dssp EEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEE
Confidence 45567889996 9998877654321 135665555
No 261
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=26.17 E-value=98 Score=25.71 Aligned_cols=35 Identities=11% Similarity=0.238 Sum_probs=28.8
Q ss_pred CccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccc
Q 033158 54 SRPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQS 90 (126)
Q Consensus 54 ~~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS 90 (126)
.+.+||.=..||+|....+++.++.- .+.+.++..
T Consensus 18 ~~v~vy~~~~Cp~C~~~k~~L~~~~i--~~~~~dv~~ 52 (598)
T 2x8g_A 18 AAVILFSKTTCPYCKKVKDVLAEAKI--KHATIELDQ 52 (598)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTC--CCEEEEGGG
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC--CcEEEEccc
Confidence 36789999999999999999998754 577888753
No 262
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=26.07 E-value=1.5e+02 Score=20.55 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=22.2
Q ss_pred CCCcchHHHHHHHHHhC---CCCcEEEEec--cchh-HHHHHHhc
Q 033158 62 GVCNLCNGGVKFVRDND---KNRRIRYEAL--QSES-GKKLLRRS 100 (126)
Q Consensus 62 G~C~LC~~~V~fl~r~D---r~~~~~F~~l--QS~~-g~~lL~~~ 100 (126)
-.|+.|..++.-+.+.- +...+.++.+ +++. .++..+.+
T Consensus 41 ~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~ 85 (186)
T 1n8j_A 41 DFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSS 85 (186)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHC
T ss_pred CCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc
Confidence 58999999988776542 1234555544 4432 23344444
No 263
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=25.93 E-value=62 Score=22.21 Aligned_cols=62 Identities=8% Similarity=0.148 Sum_probs=37.5
Q ss_pred cEEEEeCCCcchHHHHHHHHHhC----CCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEE-CCch
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDND----KNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVE-KDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~D----r~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~-~Gr~ 118 (126)
.+.||=-.|+-|......+.+.. ..-.|..+++...... +...+++....+=++++++ +|+.
T Consensus 50 lv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~-~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 50 MVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEP-KDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp EEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSC-SCGGGCTTCSCSSEEEEECTTSCB
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchH-HHHHhcccCCcCCeEEEECCCCCE
Confidence 46678889999999998876532 1235666666543210 2345555433344777774 6664
No 264
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=25.86 E-value=2.3e+02 Score=21.96 Aligned_cols=61 Identities=8% Similarity=0.166 Sum_probs=38.8
Q ss_pred cEEEEeCCCcchHHHH---------HHHHHhCCCCcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 56 PIMLYDGVCNLCNGGV---------KFVRDNDKNRRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V---------~fl~r~Dr~~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
.+.||--.|+-|...- ..+.+.-....+.|+.+.-..-.++.+++|+. ..=+++++.+|+.
T Consensus 34 lV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~--~~PTl~~f~~G~~ 103 (367)
T 3us3_A 34 ALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLT--EEDSIYVFKEDEV 103 (367)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCC--STTEEEEEETTEE
T ss_pred EEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCC--cCceEEEEECCcE
Confidence 4558999998874432 12222212336999988776666788888874 3457777666653
No 265
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=25.10 E-value=55 Score=22.09 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=22.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.|+...|+.|. .+.-+.+.-. ...+.++.+
T Consensus 35 vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~v 70 (171)
T 3cmi_A 35 VLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGF 70 (171)
T ss_dssp EEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEE
Confidence 45668899999999 8877655422 224777666
No 266
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=29.80 E-value=16 Score=24.27 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=24.0
Q ss_pred ccEEEEeCCCcchHHHHHHHHH-hC---C-CCcEEEEecc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRD-ND---K-NRRIRYEALQ 89 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r-~D---r-~~~~~F~~lQ 89 (126)
-.+.|+-..|+.|......+.+ .- . ...+.++.+.
T Consensus 36 vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~ 75 (159)
T 2ls5_A 36 VMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGID 75 (159)
Confidence 3566788899999998887766 21 1 3456666664
No 267
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=23.98 E-value=66 Score=21.96 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=25.7
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhC-CCCcEEEEeccc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDND-KNRRIRYEALQS 90 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~D-r~~~~~F~~lQS 90 (126)
+.+||.=-.||+|.+..+++.+.- -.-.+....+..
T Consensus 15 ~Vvvysk~~Cp~C~~ak~lL~~~~~~~v~~~~idid~ 51 (127)
T 3l4n_A 15 PIIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDK 51 (127)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHHEEEESCCEEEEGGG
T ss_pred CEEEEEcCCCccHHHHHHHHHHhcccCCCcEEEEecC
Confidence 456666678999999999998852 123567777753
No 268
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=23.62 E-value=61 Score=20.87 Aligned_cols=57 Identities=11% Similarity=0.170 Sum_probs=37.1
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEeccch----hHHHHHHhcCCCccCCcEEEEEECCc
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEALQSE----SGKKLLRRSGRAPDDISSVVLVEKDR 117 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~lQS~----~g~~lL~~~Gl~~e~~dsvllv~~Gr 117 (126)
..+.||=-.|+-|......+.+... .+.++.+... ...++.+.+|+. .+=++++ +|+
T Consensus 15 ~vV~F~A~WC~~C~~~~p~~~~~a~--~~~~v~~~~~~~~~~~~~l~~~~~V~--~~PT~~i--~G~ 75 (106)
T 3kp8_A 15 GGTMYGAYWCPHCQDQKELFGAAFD--QVPYVECSPNGPGTPQAQECTEAGIT--SYPTWII--NGR 75 (106)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGG--GSCEEESCTTCTTSCCCHHHHHTTCC--SSSEEEE--TTE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHH--hCCEEEEecccccchhHHHHHHcCCe--EeCEEEE--CCE
Confidence 4688999999999999998877653 3446666521 223466777763 3335544 554
No 269
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=22.13 E-value=89 Score=22.87 Aligned_cols=60 Identities=8% Similarity=-0.067 Sum_probs=43.0
Q ss_pred EEEEeCCCcchHHHHHHHHHhCCC--CcEEEEeccchhHHHHHHhcCCCccCCcEEEEEECCch
Q 033158 57 IMLYDGVCNLCNGGVKFVRDNDKN--RRIRYEALQSESGKKLLRRSGRAPDDISSVVLVEKDRY 118 (126)
Q Consensus 57 iV~FDG~C~LC~~~V~fl~r~Dr~--~~~~F~~lQS~~g~~lL~~~Gl~~e~~dsvllv~~Gr~ 118 (126)
+=|+--+|+-|..-.-.+.+...+ +++.|.-+.-+.-.++-..||+. .+=++++..+|+.
T Consensus 46 VdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~--siPT~~fFk~G~~ 107 (160)
T 2av4_A 46 IRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELY--DPVSVMFFYRNKH 107 (160)
T ss_dssp EEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCC--SSEEEEEEETTEE
T ss_pred EEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCC--CCCEEEEEECCEE
Confidence 337889999999988888666542 56778877666666677788763 4458877776664
No 270
>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}
Probab=22.07 E-value=1.4e+02 Score=22.01 Aligned_cols=36 Identities=3% Similarity=-0.135 Sum_probs=23.2
Q ss_pred CCccEEEEeCCCcchHHHHHHHHHhCCCCcEEEEec
Q 033158 53 DSRPIMLYDGVCNLCNGGVKFVRDNDKNRRIRYEAL 88 (126)
Q Consensus 53 ~~~~iV~FDG~C~LC~~~V~fl~r~Dr~~~~~F~~l 88 (126)
+++.+|++--.||+|.+..-.+....-.-....+++
T Consensus 4 p~~~~LY~~~~sP~~~rv~i~L~e~gi~ye~~~vd~ 39 (265)
T 4g10_A 4 PQELTIYHIPGCPFSERVEIMLELKGLRMKDVEIDI 39 (265)
T ss_dssp CCCCEEEECTTCHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 446788888999999987655555443323344444
No 271
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=22.06 E-value=86 Score=21.66 Aligned_cols=42 Identities=12% Similarity=0.101 Sum_probs=23.9
Q ss_pred eCCCcchHHH-HHHHHHhC-----CCCc-EEEEeccchh-HHHHHHhcCC
Q 033158 61 DGVCNLCNGG-VKFVRDND-----KNRR-IRYEALQSES-GKKLLRRSGR 102 (126)
Q Consensus 61 DG~C~LC~~~-V~fl~r~D-----r~~~-~~F~~lQS~~-g~~lL~~~Gl 102 (126)
-..|+.|..+ +.-+.+.- +.-. +--++.+++. .++..+.+|+
T Consensus 53 a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2pwj_A 53 GAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQA 102 (171)
T ss_dssp CTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 3579999998 77665432 2223 4445555433 3445566664
No 272
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=21.58 E-value=1.7e+02 Score=24.57 Aligned_cols=57 Identities=11% Similarity=0.177 Sum_probs=40.0
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC-----CCcEEEEeccc--hhHHHHHHhcCCCccCCcEEEEEE
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK-----NRRIRYEALQS--ESGKKLLRRSGRAPDDISSVVLVE 114 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr-----~~~~~F~~lQS--~~g~~lL~~~Gl~~e~~dsvllv~ 114 (126)
.+.||--.|+-|......+.+... +..+.|+.+.- +...++.+.+|+. .+=++++++
T Consensus 34 lV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~--~~PTl~~f~ 97 (519)
T 3t58_A 34 AVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIA--GFPTVRFFQ 97 (519)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCC--SBSEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCc--ccCEEEEEc
Confidence 466899999999999887765432 23688877764 4456788888873 334666665
No 273
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=21.39 E-value=1.3e+02 Score=20.68 Aligned_cols=27 Identities=7% Similarity=0.257 Sum_probs=14.7
Q ss_pred CCCcchHHHHHHHHHhC--CCCcEEEEec
Q 033158 62 GVCNLCNGGVKFVRDND--KNRRIRYEAL 88 (126)
Q Consensus 62 G~C~LC~~~V~fl~r~D--r~~~~~F~~l 88 (126)
+.|+.|...+.-+.+.- ...+++++.+
T Consensus 46 ~~Cp~~~~~l~~l~~~~~~~~~~v~~v~i 74 (170)
T 4hde_A 46 TVCPPMTANMAKLQKMAKEEKLDVQFVSF 74 (170)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CcccHHHHHHHHHHHhhhcccccceeEee
Confidence 45666666666554432 2345666655
No 274
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=21.21 E-value=1.3e+02 Score=21.50 Aligned_cols=34 Identities=6% Similarity=-0.070 Sum_probs=22.4
Q ss_pred ccEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEec
Q 033158 55 RPIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~l 88 (126)
-.+.|+--.|+.|..+...+.+.-. ...+.++.+
T Consensus 50 vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 50 LLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 3455788899999997766654432 224666665
No 275
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=20.48 E-value=1.4e+02 Score=20.26 Aligned_cols=34 Identities=9% Similarity=-0.042 Sum_probs=22.0
Q ss_pred ccEEEEeCCCc-chHHHHHHHHHhC----C-CCcEEEEec
Q 033158 55 RPIMLYDGVCN-LCNGGVKFVRDND----K-NRRIRYEAL 88 (126)
Q Consensus 55 ~~iV~FDG~C~-LC~~~V~fl~r~D----r-~~~~~F~~l 88 (126)
-.+.|+=..|+ .|..+...+.+.- . ...+.++.+
T Consensus 31 vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~i 70 (170)
T 3me7_A 31 IILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITF 70 (170)
T ss_dssp EEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEE
T ss_pred EEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEE
Confidence 34567789997 6999888775542 1 234665554
No 276
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=20.11 E-value=81 Score=25.21 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=24.1
Q ss_pred cEEEEeCCCcchHHHHHHHHHhCC---CCcEEEEecc
Q 033158 56 PIMLYDGVCNLCNGGVKFVRDNDK---NRRIRYEALQ 89 (126)
Q Consensus 56 ~iV~FDG~C~LC~~~V~fl~r~Dr---~~~~~F~~lQ 89 (126)
.+.||--.|+.|......+.+.-. ...+.++.+.
T Consensus 86 Ll~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs 122 (352)
T 2hyx_A 86 LIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVH 122 (352)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 456788999999998887755432 2357777774
Done!