BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033159
(126 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5
pdb|3NER|B Chain B, Structure Of Human Type B Cytochrome B5
Length = 92
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K W + +VYDV+ F+++HPGG+EVL+ G DA+ FEDVGHS AREM+ +YYIGD
Sbjct: 24 KELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGD 83
Query: 72 IDPS 75
I PS
Sbjct: 84 IHPS 87
>pdb|2IBJ|A Chain A, Structure Of House Fly Cytochrome B5
Length = 88
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 17 WFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDI 72
WF + VYDV++F+++HPGG+EVLI GKDAT FEDVGHS AREMM +Y +G++
Sbjct: 24 WFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGEL 81
>pdb|1B5M|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 84
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 21 QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 75
+VYD++ F+ +HPGG+EVL+ G DAT FEDVGHS AREM+ +YYIGD+ P+
Sbjct: 26 RVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPN 80
>pdb|3MUS|A Chain A, 2a Resolution Structure Of Rat Type B Cytochrome B5
pdb|3MUS|B Chain B, 2a Resolution Structure Of Rat Type B Cytochrome B5
Length = 87
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 18 FYMQVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 75
+ +VYD++ F+ +HPGG+EVL+ G DAT FEDVGHS AREM+ +YYIGD+ P+
Sbjct: 25 IHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPN 82
>pdb|1EUE|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1EUE|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 86
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%)
Query: 21 QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 75
+VYD++ F+ +HPGG+E+L+ G DAT FED+GHS AREM+ +YYIGD+ P+
Sbjct: 28 RVYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPDAREMLKQYYIGDVHPN 82
>pdb|1ICC|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|C Chain C, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|D Chain D, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 87
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 18 FYMQVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 75
+ +VYD++ F+ +HPGG+EVL G DAT FEDVGHS AREM+ +YYIGD+ P+
Sbjct: 25 IHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREMLKQYYIGDVHPN 82
>pdb|1AWP|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1AWP|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 92
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 18 FYMQVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTV 77
+ +VYD++ F+ +HPGG+E+L+ G DAT FED+GHS AREM+ +YYIGD+ P+ +
Sbjct: 30 IHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPDAREMLKQYYIGDVHPNDL 89
Query: 78 PRK 80
K
Sbjct: 90 KPK 92
>pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|B Chain B, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|C Chain C, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|D Chain D, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
Length = 93
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
++ W + +VYD++ F+ +HPGG+EVL G DAT FEDVGHS AREM +YYIGD
Sbjct: 25 ESTWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREMSKQYYIGD 84
Query: 72 IDPSTVPRK 80
+ P+ + K
Sbjct: 85 VHPNDLKPK 93
>pdb|1LJ0|A Chain A, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|B Chain B, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|C Chain C, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|D Chain D, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5
Length = 92
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 18 FYMQVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTV 77
+ +VYD++ F+ +HPGG+EVL G DAT FEDVGHS AREM +YYIGD+ P+ +
Sbjct: 30 LHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPDAREMSKQYYIGDVHPNDL 89
Query: 78 PRK 80
K
Sbjct: 90 KPK 92
>pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human
Cytochrome B5
Length = 108
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS AREM + IG+
Sbjct: 24 KSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGE 83
Query: 72 IDPSTVPR 79
+ P P+
Sbjct: 84 LHPDDRPK 91
>pdb|3OZZ|B Chain B, Structure Of A Cytochrome B5 Core-Swap Mutant
Length = 82
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+ +HPGG+EVL+ G DAT FEDVGHS AREM+ + IG+
Sbjct: 17 KSTWMIIHYKVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome
B5 In The Presence Of 2 M Guanidinium Chloride:
Monitoring The Early Steps In Protein Unfolding
pdb|1AW3|A Chain A, The Solution Nmr Structure Of Oxidized Rat Microsomal
Cytochrome B5, Minimized Average Structure
pdb|1AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 19 Structures
pdb|1B5A|A Chain A, Rat Ferrocytochrome B5 A Conformation, Nmr, 1 Structure
pdb|1B5B|A Chain A, Rat Ferrocytochrome B5 B Conformation, Nmr, 1 Structure
Length = 94
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ Y IG+
Sbjct: 19 KSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGE 78
Query: 72 IDP 74
+ P
Sbjct: 79 LHP 81
>pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1I8C|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1IET|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, Minimized Average
Structure
pdb|1IEU|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, 10 Structures
Length = 98
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ Y IG+
Sbjct: 23 KSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGE 82
Query: 72 IDP 74
+ P
Sbjct: 83 LHP 85
>pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat
Microsomal Cytochrome B5, Minimized Average Structure
Length = 99
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ Y IG+
Sbjct: 24 KSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGE 83
Query: 72 IDP 74
+ P
Sbjct: 84 LHP 86
>pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5
Length = 104
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 23 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 82
Query: 72 IDP 74
+ P
Sbjct: 83 LHP 85
>pdb|1CYO|A Chain A, Bovine Cytochrome B(5)
Length = 93
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 19 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 78
Query: 72 IDP 74
+ P
Sbjct: 79 LHP 81
>pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome
B5, Nmr, Minimized Average Structure
pdb|1MNY|A Chain A, Dimethyl Propionate Ester Heme-Containing Cytochrome B5
pdb|2AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 21 Structures
Length = 94
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ Y IG+
Sbjct: 19 KSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGE 78
Query: 72 IDP 74
+ P
Sbjct: 79 LHP 81
>pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized
Microsomal Rabbit Cytochrome B5
Length = 104
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 24 KSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 83
Query: 72 IDP 74
+ P
Sbjct: 84 LHP 86
>pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized
Fragment Of Cytochrome B5
pdb|1NX7|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5
Length = 82
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit
Cytochrome B5. Factors Determining The Heterogeneous
Binding Of The Heme
Length = 94
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 19 KSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 78
Query: 72 IDP 74
+ P
Sbjct: 79 LHP 81
>pdb|1IB7|A Chain A, Solution Structure Of F35y Mutant Of Rat Ferro
Cytochrome B5, A Conformation, Ensemble Of 20
Structures
Length = 94
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ ++++HPGG+EVL G DAT +FEDVGHS ARE+ Y IG+
Sbjct: 19 KSTWVILHHKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGE 78
Query: 72 IDP 74
+ P
Sbjct: 79 LHP 81
>pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro
Cytochrome B5
Length = 94
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FEDVGHS RE+ Y IG+
Sbjct: 19 KSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDVRELSKTYIIGE 78
Query: 72 IDP 74
+ P
Sbjct: 79 LHP 81
>pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5
Length = 82
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT ++EDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENYEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ ++++HPGG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|B Chain B, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|C Chain C, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|D Chain D, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|E Chain E, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|F Chain F, Crystal Structure Of F58w Mutant Of Cytochrome B5
Length = 82
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT ++EDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENWEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant
(E48aE56AD60A)
Length = 82
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL + G DAT +FE VGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEVLRAQAGGDATANFEAVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5
Length = 82
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+E L G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEELREQAGGDATENFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5
Length = 82
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+E L G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEYLREQAGGDATENFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5
Length = 82
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+ VL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEAVLREQAGGDATANFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V45h
Length = 82
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+E L G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEHLREQAGGDATENFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of
Trypsin-Solubilized Fragment Of Cytochrome B5
Length = 82
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FED GHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V61h
Length = 82
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+EVL G DAT +FED GHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1M59|A Chain A, Crystal Structure Of P40v Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++H GG+EVL G DAT +FEDVGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHVGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF
Cytochrome B5
Length = 82
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+ VL + G DAT +FE VGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
pdb|1F04|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
Length = 82
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 14 KNKWFYM--QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD 71
K+ W + +VYD++ F+++HPGG+ VL + G DAT +FE VGHS ARE+ + IG+
Sbjct: 17 KSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHSTDARELSKTFIIGE 76
Query: 72 IDP 74
+ P
Sbjct: 77 LHP 79
>pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
pdb|3LF5|B Chain B, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
Length = 88
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 22 VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGD--IDPSTV 77
VY+VS +M+ HPGG++ L+ A G D T F+ V + M+ + +G I P+ +
Sbjct: 30 VYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIKPAVL 87
>pdb|3KS0|A Chain A, Crystal Structure Of The Heme Domain Of Flavocytochrome
B2 In Complex With Fab B2b4
pdb|3KS0|B Chain B, Crystal Structure Of The Heme Domain Of Flavocytochrome
B2 In Complex With Fab B2b4
Length = 95
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 22 VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKY 67
VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY
Sbjct: 28 VYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKY 69
>pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
Length = 511
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 17 WFYMQ--VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY-----I 69
W + VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY +
Sbjct: 26 WVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKYIAPEKKL 81
Query: 70 GDIDPSTVPRKRAYIPPQQPAYNQD 94
G + S P PP P ++
Sbjct: 82 GPLQGSMPP--ELVCPPYAPGETKE 104
>pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
Length = 511
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 17 WFYMQ--VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY-----I 69
W + VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY +
Sbjct: 26 WVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKYIAPEKKL 81
Query: 70 GDIDPSTVPRKRAYIPPQQPAYNQD 94
G + S P PP P ++
Sbjct: 82 GPLQGSMPP--ELVCPPYAPGETKE 104
>pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
Length = 511
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 17 WFYMQ--VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY-----I 69
W + VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY +
Sbjct: 26 WVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKYIAPEKKL 81
Query: 70 GDIDPSTVPRKRAYIPPQQPAYNQD 94
G + S P PP P ++
Sbjct: 82 GPLQGSMPP--ELVCPPYAPGETKE 104
>pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound
pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound
Length = 511
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 17 WFYMQ--VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY-----I 69
W + VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY +
Sbjct: 26 WVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKYIAPEKKL 81
Query: 70 GDIDPSTVPRKRAYIPPQQPAYNQD 94
G + S P PP P ++
Sbjct: 82 GPLQGSMPP--ELVCPPYAPGETKE 104
>pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
Length = 506
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 17 WFYMQ--VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY-----I 69
W + VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY +
Sbjct: 21 WVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKYIAPEKKL 76
Query: 70 GDIDPSTVPRKRAYIPPQQPAYNQD 94
G + S P PP P ++
Sbjct: 77 GPLQGSMPP--ELVCPPYAPGETKE 99
>pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate
pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate
Length = 511
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 17 WFYMQ--VYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYY-----I 69
W + VYD++ F+ +HPGG +V+ GKD T FE + A ++DKY +
Sbjct: 26 WVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL----HAPNVIDKYIAPEKKL 81
Query: 70 GDIDPSTVPRKRAYIPPQQPAYNQD 94
G + S P PP P ++
Sbjct: 82 GPLQGSMPP--ELVCPPYAPGETKE 104
>pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira
Vacuolata Cytochrome B558, A Prokaryotic Homologue Of
Cytochrome B5
Length = 90
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 21 QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVG----HSDSAREMMDKYYIGDIDPST 76
+VYD++ ++ +HPG +++ G+++T +E HS A ++ +Y IG ++ T
Sbjct: 31 KVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYLIGTLEEIT 90
>pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain
Of Human Sulfite Oxidase
Length = 82
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 13 EKNKWFYM--QVYDVSSFMDDHPGGDEVLISATGK--DATNDFEDVGHSDSAREMMDKYY 68
E W + +V+DV+ F+D HPGG L+ A G + V + RE++ +Y
Sbjct: 19 ETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQSHVRELLAQYK 78
Query: 69 IGDI 72
IG++
Sbjct: 79 IGEL 82
>pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 33.9 bits (76), Expect = 0.022, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 22 VYDVSSFMDDHPGG-DEVLISATGK-DATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 79
V+DV+ F++ HPGG D++L++A G + V E++ +Y +G++ P P
Sbjct: 30 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAPA 89
Query: 80 KR------AYIPPQQPAYNQDKTPEF 99
A PP+ P + F
Sbjct: 90 APDAQDPFAGDPPRHPGLRVNSQKPF 115
>pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr
322 Phe
Length = 466
Score = 33.9 bits (76), Expect = 0.022, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 22 VYDVSSFMDDHPGG-DEVLISATGK-DATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 79
V+DV+ F++ HPGG D++L++A G + V E++ +Y +G++ P P
Sbjct: 30 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAPA 89
Query: 80 KR------AYIPPQQPAYNQDKTPEF 99
A PP+ P + F
Sbjct: 90 APDAQDPFAGDPPRHPGLRVNSQKPF 115
>pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant Cys 185 Ala
Length = 466
Score = 33.9 bits (76), Expect = 0.023, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 22 VYDVSSFMDDHPGG-DEVLISATGK-DATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 79
V+DV+ F++ HPGG D++L++A G + V E++ +Y +G++ P P
Sbjct: 30 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAPA 89
Query: 80 KR------AYIPPQQPAYNQDKTPEF 99
A PP+ P + F
Sbjct: 90 APDAQDPFAGDPPRHPGLRVNSQKPF 115
>pdb|3HBG|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant C185s
pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant
Sulfite Oxidase With Bound Substrate, Sulfite, At The
Active Site
Length = 466
Score = 33.9 bits (76), Expect = 0.023, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 22 VYDVSSFMDDHPGG-DEVLISATGK-DATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 79
V+DV+ F++ HPGG D++L++A G + V E++ +Y +G++ P P
Sbjct: 30 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAPA 89
Query: 80 KR------AYIPPQQPAYNQDKTPEF 99
A PP+ P + F
Sbjct: 90 APDAQDPFAGDPPRHPGLRVNSQKPF 115
>pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver
pdb|1SOX|B Chain B, Sulfite Oxidase From Chicken Liver
Length = 466
Score = 33.9 bits (76), Expect = 0.023, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 22 VYDVSSFMDDHPGG-DEVLISATGK-DATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 79
V+DV+ F++ HPGG D++L++A G + V E++ +Y +G++ P P
Sbjct: 30 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAPA 89
Query: 80 KR------AYIPPQQPAYNQDKTPEF 99
A PP+ P + F
Sbjct: 90 APDAQDPFAGDPPRHPGLRVNSQKPF 115
>pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 33.9 bits (76), Expect = 0.023, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 22 VYDVSSFMDDHPGG-DEVLISATGK-DATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPR 79
V+DV+ F++ HPGG D++L++A G + V E++ +Y +G++ P P
Sbjct: 30 VFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSPDEAPA 89
Query: 80 KR------AYIPPQQPAYNQDKTPEF 99
A PP+ P + F
Sbjct: 90 APDAQDPFAGDPPRHPGLRVNSQKPF 115
>pdb|1X3X|A Chain A, Crystal Structure Of Cytochrome B5 From Ascaris Suum
pdb|1X3X|B Chain B, Crystal Structure Of Cytochrome B5 From Ascaris Suum
Length = 82
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 21 QVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVG-HSDSAREMMDK 66
+V+D++SF +HPGG +V+++ G+DAT+ + + H +A +M K
Sbjct: 27 EVHDMTSFYKEHPGG-KVILNKAGQDATSVLKTLAPHVKAADVVMKK 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,614,458
Number of Sequences: 62578
Number of extensions: 135343
Number of successful extensions: 253
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 201
Number of HSP's gapped (non-prelim): 52
length of query: 126
length of database: 14,973,337
effective HSP length: 87
effective length of query: 39
effective length of database: 9,529,051
effective search space: 371632989
effective search space used: 371632989
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)