Query 033161
Match_columns 126
No_of_seqs 104 out of 522
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 17:22:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033161.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033161hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fvt_A Conserved hypothetical 100.0 8.9E-45 3E-49 260.1 12.0 117 8-124 12-128 (135)
2 2fi9_A Outer membrane protein; 100.0 3.8E-44 1.3E-48 254.6 14.0 114 8-122 14-127 (128)
3 2gm2_A Conserved hypothetical 100.0 1.1E-43 3.8E-48 253.5 13.1 115 8-124 10-125 (132)
4 3cpk_A Uncharacterized protein 100.0 2.5E-42 8.5E-47 250.7 13.5 119 7-125 9-150 (150)
5 2ab1_A Hypothetical protein; H 100.0 3.4E-41 1.2E-45 237.8 12.8 109 11-121 5-120 (122)
6 2cyj_A Hypothetical protein PH 100.0 3.2E-38 1.1E-42 221.4 7.8 106 11-121 2-116 (118)
7 1ihn_A Hypothetical protein MT 100.0 4.5E-36 1.5E-40 209.2 4.4 101 10-121 2-111 (113)
8 3md9_A Hemin-binding periplasm 72.0 6.9 0.00024 28.3 5.2 35 59-97 55-89 (255)
9 1kjn_A MTH0777; hypotethical p 71.0 2.7 9.2E-05 30.1 2.6 47 66-112 10-58 (157)
10 3kkj_A Amine oxidase, flavin-c 66.8 3.6 0.00012 27.8 2.5 31 64-98 3-33 (336)
11 2r7a_A Bacterial heme binding 66.6 21 0.0007 25.7 6.8 35 59-97 55-89 (256)
12 3psh_A Protein HI_1472; substr 63.4 7.8 0.00027 29.2 4.1 35 59-98 80-114 (326)
13 3zqu_A Probable aromatic acid 62.9 6.4 0.00022 29.1 3.4 45 65-109 6-50 (209)
14 2bib_A CBPE, teichoic acid pho 62.3 8.2 0.00028 31.6 4.3 40 54-95 238-279 (547)
15 1id1_A Putative potassium chan 61.4 12 0.0004 25.0 4.3 46 63-112 3-50 (153)
16 3nbm_A PTS system, lactose-spe 61.3 4.5 0.00015 26.8 2.1 37 62-100 52-88 (108)
17 4hn9_A Iron complex transport 61.0 8.8 0.0003 29.2 4.0 33 59-97 112-144 (335)
18 3ahc_A Phosphoketolase, xylulo 57.8 2.5 8.6E-05 37.6 0.4 54 63-116 659-726 (845)
19 2ejb_A Probable aromatic acid 57.2 8.5 0.00029 27.8 3.2 43 65-107 3-45 (189)
20 2r79_A Periplasmic binding pro 55.9 18 0.00061 26.7 4.9 35 59-97 55-89 (283)
21 1n2z_A Vitamin B12 transport p 52.7 16 0.00055 26.2 4.1 35 59-97 53-87 (245)
22 3ju3_A Probable 2-oxoacid ferr 50.7 6.6 0.00023 26.0 1.6 35 62-97 12-46 (118)
23 2q8p_A Iron-regulated surface 49.9 10 0.00034 27.5 2.6 34 59-97 56-89 (260)
24 3hh1_A Tetrapyrrole methylase 49.4 30 0.001 22.4 4.7 40 58-97 74-115 (117)
25 1umd_B E1-beta, 2-OXO acid deh 49.1 5.4 0.00018 30.8 1.0 37 60-97 199-235 (324)
26 1p3y_1 MRSD protein; flavoprot 48.2 15 0.00051 26.6 3.2 45 64-108 9-53 (194)
27 1itz_A Transketolase; calvin c 48.1 6.6 0.00023 33.6 1.5 35 64-99 563-597 (675)
28 1w85_B Pyruvate dehydrogenase 45.0 6.7 0.00023 30.2 1.0 38 59-97 197-234 (324)
29 3mcu_A Dipicolinate synthase, 44.9 18 0.00061 26.6 3.2 42 65-106 7-49 (207)
30 3ipz_A Monothiol glutaredoxin- 44.7 20 0.00068 22.8 3.2 50 49-98 3-55 (109)
31 1wdi_A Hypothetical protein TT 44.7 38 0.0013 27.0 5.3 43 76-118 187-256 (345)
32 3m49_A Transketolase; alpha-be 44.6 7.8 0.00027 33.5 1.4 36 63-99 576-611 (690)
33 1iv0_A Hypothetical protein; r 44.6 58 0.002 20.8 5.4 37 61-97 49-92 (98)
34 3rim_A Transketolase, TK; TPP, 44.5 7.3 0.00025 33.8 1.2 36 63-99 584-619 (700)
35 2r8o_A Transketolase 1, TK 1; 44.0 7.1 0.00024 33.4 1.0 35 64-99 550-584 (669)
36 2obn_A Hypothetical protein; s 43.8 21 0.00073 28.3 3.8 39 52-93 64-106 (349)
37 1sbz_A Probable aromatic acid 43.7 18 0.00061 26.3 3.1 43 66-108 3-46 (197)
38 3l84_A Transketolase; TKT, str 43.7 7.2 0.00025 33.3 1.0 36 63-99 525-560 (632)
39 2nyt_A Probable C->U-editing e 43.5 84 0.0029 22.6 6.7 51 63-113 110-163 (190)
40 2e6k_A Transketolase; structur 43.1 8.2 0.00028 32.9 1.3 35 64-99 542-576 (651)
41 3rht_A (gatase1)-like protein; 42.1 20 0.00069 27.1 3.3 37 64-101 5-41 (259)
42 2yan_A Glutaredoxin-3; oxidore 40.6 26 0.00088 21.8 3.2 37 64-100 17-56 (105)
43 1gpu_A Transketolase; transfer 40.3 6.6 0.00023 33.7 0.3 35 64-99 555-589 (680)
44 1vky_A S-adenosylmethionine:tR 40.2 41 0.0014 26.9 4.8 43 76-118 189-259 (347)
45 1yy3_A S-adenosylmethionine:tR 39.1 43 0.0015 26.7 4.8 43 76-118 186-256 (346)
46 2ozl_B PDHE1-B, pyruvate dehyd 38.5 8.6 0.0003 30.0 0.7 38 59-97 212-249 (341)
47 2bfd_B 2-oxoisovalerate dehydr 38.3 8.9 0.0003 29.9 0.7 38 59-97 215-253 (342)
48 4g85_A Histidine-tRNA ligase, 38.3 17 0.00059 29.7 2.5 34 63-96 419-452 (517)
49 4f3y_A DHPR, dihydrodipicolina 38.3 13 0.00044 28.3 1.6 59 63-125 73-131 (272)
50 1vp8_A Hypothetical protein AF 38.0 54 0.0018 24.2 4.9 39 57-96 61-104 (201)
51 3qjg_A Epidermin biosynthesis 37.2 10 0.00034 27.2 0.8 43 65-107 7-49 (175)
52 1e2b_A Enzyme IIB-cellobiose; 36.8 13 0.00045 24.1 1.3 30 67-96 8-37 (106)
53 4gxw_A Adenosine deaminase; am 36.6 20 0.00069 28.5 2.6 31 69-100 239-269 (380)
54 1qv9_A F420-dependent methylen 36.4 19 0.00064 27.8 2.2 67 46-112 41-113 (283)
55 4g84_A Histidine--tRNA ligase, 36.3 15 0.00051 29.2 1.8 34 63-96 366-399 (464)
56 3uk1_A Transketolase; structur 36.3 9.6 0.00033 33.0 0.7 35 64-99 598-632 (711)
57 1g63_A Epidermin modifying enz 36.2 11 0.00037 27.1 0.8 43 65-107 4-46 (181)
58 3nkl_A UDP-D-quinovosamine 4-d 35.9 20 0.00068 23.3 2.1 41 62-102 64-104 (141)
59 2z6r_A Diphthine synthase; met 35.3 61 0.0021 23.8 5.0 41 63-103 77-118 (265)
60 3fwz_A Inner membrane protein 35.3 42 0.0014 21.9 3.7 37 63-103 7-44 (140)
61 2etv_A Iron(III) ABC transport 34.7 65 0.0022 24.5 5.2 34 60-98 93-126 (346)
62 3sho_A Transcriptional regulat 33.6 41 0.0014 22.9 3.6 49 48-97 23-72 (187)
63 3lgd_A Adenosine deaminase CEC 33.4 31 0.0011 28.7 3.3 37 63-102 352-388 (508)
64 1r61_A Metal-dependent hydrola 32.9 30 0.001 25.0 2.9 50 48-99 88-145 (207)
65 3kom_A Transketolase; rossmann 32.8 9.8 0.00034 32.6 0.2 35 63-98 549-583 (663)
66 2qip_A Protein of unknown func 32.7 31 0.001 23.7 2.8 37 61-100 106-143 (165)
67 1wik_A Thioredoxin-like protei 31.8 58 0.002 20.3 3.8 37 63-99 14-53 (109)
68 3mos_A Transketolase, TK; thia 30.5 9.8 0.00033 32.2 -0.2 34 63-97 498-531 (616)
69 2eq6_A Pyruvate dehydrogenase 30.5 1.4E+02 0.0049 23.3 6.7 76 16-96 119-198 (464)
70 3llv_A Exopolyphosphatase-rela 29.9 46 0.0016 21.4 3.1 37 64-104 7-44 (141)
71 3fxa_A SIS domain protein; str 29.6 21 0.00071 24.9 1.4 53 49-102 29-83 (201)
72 3fau_A NEDD4-binding protein 2 29.6 24 0.00082 21.5 1.6 29 67-95 39-71 (82)
73 2bcg_G Secretory pathway GDP d 29.2 30 0.001 27.3 2.5 32 62-97 10-41 (453)
74 2qbu_A Precorrin-2 methyltrans 29.1 59 0.002 23.1 3.9 39 60-98 91-130 (232)
75 3p94_A GDSL-like lipase; serin 28.6 78 0.0027 21.0 4.3 52 60-111 71-149 (204)
76 3oqb_A Oxidoreductase; structu 28.5 1.7E+02 0.0059 22.2 6.7 51 61-114 81-136 (383)
77 3ndc_A Precorrin-4 C(11)-methy 28.5 69 0.0023 23.7 4.3 37 61-97 74-111 (264)
78 3zyw_A Glutaredoxin-3; metal b 28.4 30 0.001 22.2 2.0 38 62-99 14-54 (111)
79 2d59_A Hypothetical protein PH 28.2 52 0.0018 22.0 3.3 51 46-98 7-57 (144)
80 2l2q_A PTS system, cellobiose- 27.6 24 0.00081 22.7 1.3 38 66-103 8-47 (109)
81 1eo1_A Hypothetical protein MT 27.5 1.2E+02 0.0043 19.3 5.2 40 61-106 63-105 (124)
82 3ijp_A DHPR, dihydrodipicolina 27.1 37 0.0013 26.1 2.6 59 63-125 88-146 (288)
83 3lqk_A Dipicolinate synthase s 27.0 20 0.00069 26.1 1.0 43 64-106 8-51 (201)
84 2we8_A Xanthine dehydrogenase; 26.8 25 0.00087 28.0 1.6 40 58-101 199-238 (386)
85 1qzu_A Hypothetical protein MD 26.6 17 0.00058 26.6 0.5 46 63-108 19-65 (206)
86 2wi8_A Iron-uptake system-bind 26.4 75 0.0026 23.5 4.2 32 59-95 92-123 (311)
87 3dhx_A Methionine import ATP-b 26.2 53 0.0018 21.0 2.9 18 80-97 79-96 (106)
88 1thf_D HISF protein; thermophI 25.9 23 0.0008 25.5 1.2 46 47-94 202-249 (253)
89 2yx6_A Hypothetical protein PH 25.8 95 0.0032 19.9 4.1 40 61-106 61-103 (121)
90 1cbf_A Cobalt-precorrin-4 tran 25.6 1.3E+02 0.0044 22.3 5.4 38 60-97 90-128 (285)
91 3on5_A BH1974 protein; structu 25.5 25 0.00084 28.0 1.3 41 58-102 194-234 (362)
92 3hp4_A GDSL-esterase; psychrot 25.5 1.2E+02 0.0042 19.7 4.8 49 62-110 65-130 (185)
93 1v95_A Nuclear receptor coacti 25.5 40 0.0014 23.0 2.2 35 63-97 8-42 (130)
94 2ioj_A Hypothetical protein AF 25.4 1.5E+02 0.005 19.4 5.6 50 59-111 69-121 (139)
95 3qhp_A Type 1 capsular polysac 25.2 39 0.0013 21.9 2.2 30 62-95 31-60 (166)
96 3oz2_A Digeranylgeranylglycero 25.2 37 0.0013 25.2 2.2 31 63-97 4-34 (397)
97 4e16_A Precorrin-4 C(11)-methy 25.0 68 0.0023 23.5 3.7 39 60-98 74-113 (253)
98 1va0_A Uroporphyrin-III C-meth 24.7 98 0.0034 22.2 4.4 40 60-99 72-112 (239)
99 1ve2_A Uroporphyrin-III C-meth 24.3 93 0.0032 22.2 4.3 49 60-108 75-128 (235)
100 3l7o_A Ribose-5-phosphate isom 24.2 24 0.00081 26.3 0.9 39 63-101 18-56 (225)
101 2dxa_A Protein YBAK; trans-edi 24.0 36 0.0012 23.3 1.9 32 76-107 5-46 (166)
102 1r02_A Orexin-A, hypocretin-1; 24.0 5.3 0.00018 21.2 -1.9 18 100-117 12-29 (33)
103 2lqo_A Putative glutaredoxin R 23.9 1.3E+02 0.0046 18.5 5.0 33 64-98 4-36 (92)
104 1s4d_A Uroporphyrin-III C-meth 23.9 91 0.0031 23.2 4.2 37 61-97 90-127 (280)
105 1ka9_F Imidazole glycerol phos 23.8 29 0.00098 25.0 1.3 45 47-93 203-249 (252)
106 1vdc_A NTR, NADPH dependent th 23.8 2E+02 0.0068 20.7 6.1 31 63-97 159-189 (333)
107 2l2d_A OTU domain-containing p 23.8 22 0.00076 21.8 0.6 34 83-125 36-69 (73)
108 2g0t_A Conserved hypothetical 23.7 36 0.0012 26.9 1.9 39 53-93 81-122 (350)
109 2g1u_A Hypothetical protein TM 23.7 47 0.0016 21.9 2.3 33 62-98 18-50 (155)
110 2w6r_A Imidazole glycerol phos 23.6 25 0.00084 25.7 0.9 46 47-94 207-254 (266)
111 2qtc_A Pyruvate dehydrogenase 23.6 19 0.00064 32.1 0.3 34 64-98 724-758 (886)
112 2htm_A Thiazole biosynthesis p 23.3 73 0.0025 24.4 3.6 57 20-87 4-62 (268)
113 2o5a_A BH1328 protein; BHR21, 23.3 23 0.0008 24.0 0.7 31 62-92 32-65 (125)
114 1wde_A Probable diphthine synt 23.3 83 0.0028 23.6 3.9 35 63-97 83-118 (294)
115 3gdo_A Uncharacterized oxidore 23.2 2.4E+02 0.0083 21.2 7.0 53 61-116 63-120 (358)
116 1p6o_A Cytosine deaminase; hyd 23.2 91 0.0031 21.5 3.8 50 61-113 103-152 (161)
117 2id1_A Hypothetical protein; a 23.1 28 0.00095 23.8 1.1 31 62-92 32-65 (130)
118 2ybo_A Methyltransferase; SUMT 23.1 1.1E+02 0.0039 22.9 4.7 38 60-97 99-137 (294)
119 2wfb_A Putative uncharacterize 23.0 1E+02 0.0035 19.7 3.9 39 62-106 66-108 (120)
120 3ced_A Methionine import ATP-b 22.7 69 0.0023 20.2 2.9 17 80-96 79-95 (98)
121 1wu7_A Histidyl-tRNA synthetas 22.7 46 0.0016 26.3 2.4 36 63-98 332-367 (434)
122 4h08_A Putative hydrolase; GDS 22.6 1.8E+02 0.006 19.4 5.7 50 61-110 72-146 (200)
123 1o13_A Probable NIFB protein; 22.5 1.1E+02 0.0038 20.3 4.1 39 61-105 74-115 (136)
124 2e0n_A Precorrin-2 C20-methylt 22.3 80 0.0027 23.0 3.6 39 60-98 93-132 (259)
125 3ing_A Homoserine dehydrogenas 22.3 1.5E+02 0.005 22.9 5.2 50 61-110 80-130 (325)
126 2obn_A Hypothetical protein; s 22.1 33 0.0011 27.2 1.4 39 64-102 153-193 (349)
127 1mvl_A PPC decarboxylase athal 22.1 35 0.0012 25.0 1.5 45 63-108 19-63 (209)
128 3fdx_A Putative filament prote 22.1 1.5E+02 0.0052 18.4 5.4 34 62-95 105-141 (143)
129 3c85_A Putative glutathione-re 21.6 64 0.0022 21.7 2.7 31 64-98 40-71 (183)
130 3v4n_A HMG-COA synthase; hydro 21.6 36 0.0012 26.9 1.5 44 63-106 75-120 (388)
131 2gjf_A Designed protein; proca 21.5 64 0.0022 19.1 2.4 17 80-96 59-75 (78)
132 2qrr_A Methionine import ATP-b 21.4 75 0.0026 19.9 2.9 17 80-96 81-97 (101)
133 1lss_A TRK system potassium up 21.4 80 0.0028 19.7 3.1 29 65-97 6-34 (140)
134 2r85_A PURP protein PF1517; AT 21.3 74 0.0025 23.3 3.2 32 64-100 3-34 (334)
135 2f8m_A Ribose 5-phosphate isom 21.3 39 0.0013 25.4 1.6 29 62-90 26-54 (244)
136 1vjq_A Designed protein; struc 21.2 75 0.0026 18.8 2.7 17 80-96 51-67 (79)
137 2re1_A Aspartokinase, alpha an 21.2 60 0.0021 22.2 2.5 32 66-97 106-138 (167)
138 3lc0_A Histidyl-tRNA synthetas 21.1 33 0.0011 27.8 1.3 35 63-97 361-395 (456)
139 1evl_A Threonyl-tRNA synthetas 20.9 88 0.003 24.4 3.7 53 63-115 298-351 (401)
140 2qsw_A Methionine import ATP-b 20.8 74 0.0025 19.9 2.7 17 80-96 81-97 (100)
141 3rys_A Adenosine deaminase 1; 20.8 52 0.0018 25.7 2.3 37 62-101 216-252 (343)
142 1yvv_A Amine oxidase, flavin-c 20.8 58 0.002 23.7 2.5 31 64-98 3-33 (336)
143 3tlk_A Ferrienterobactin-bindi 20.7 1E+02 0.0035 22.9 4.0 36 59-97 111-146 (326)
144 1y81_A Conserved hypothetical 20.6 63 0.0022 21.5 2.5 36 61-99 67-102 (138)
145 3iar_A Adenosine deaminase; pu 20.5 62 0.0021 25.5 2.8 36 63-101 229-264 (367)
146 3klb_A Putative flavoprotein; 20.4 80 0.0027 21.3 3.0 48 63-110 78-134 (162)
147 3pao_A Adenosine deaminase; st 20.3 54 0.0018 25.3 2.3 36 63-101 214-249 (326)
148 3nut_A Precorrin-3 methylase; 20.1 1E+02 0.0035 22.4 3.8 40 58-97 73-117 (251)
149 3kwp_A Predicted methyltransfe 20.0 67 0.0023 24.5 2.8 45 58-102 83-129 (296)
No 1
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=100.00 E-value=8.9e-45 Score=260.06 Aligned_cols=117 Identities=26% Similarity=0.364 Sum_probs=112.2
Q ss_pred cCCceeEEcCCcEEEcCEEEeecEEEeCCccccCCCCCCCCCChhhhhchhhhCCCCcEEEEeecCCCCCCCHHHHHHHH
Q 033161 8 TMSPRISFASKGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIR 87 (126)
Q Consensus 8 ~~~~I~~y~~g~~~I~g~~y~g~vi~~~~~v~~W~~~~~~~i~~~~l~~l~~l~~~pevliiGTG~~~~~~~~~~~~~l~ 87 (126)
..++|++|++|+|+|||++|.||++++|++++.|++++++++++++++.|..+.|+||+||||||.++++++|+++++|+
T Consensus 12 ~~~~I~~y~~g~f~ing~~~~gsilv~p~~~~~W~~~~~~~l~~e~l~~l~~~~p~pevliiGTG~~~~~l~p~l~~~l~ 91 (135)
T 2fvt_A 12 RTAAIDAYGKGGFYFAGMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVWIAPRQLREALR 91 (135)
T ss_dssp SCCCCCCEETTEEECSSSEECSEEEECSSCEEEESCCSTTCCCTTTTHHHHHTTTSCSEEEEECTTSCCCCCHHHHHHHH
T ss_pred CCceEEEEcCCEEEECCEEEEeCEEEeCCCccccCCCCcccCCHHHHHHHHhcCCCCCEEEEcCCCCCCcCCHHHHHHHH
Confidence 34569999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred HcCCeEEEeChHHHHHHHHHhhhccceeEEEeecCcc
Q 033161 88 STGMKLEAIDSRNAASTYNILNEEGRIVAAALLPYGV 124 (126)
Q Consensus 88 ~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~~~ 124 (126)
++||+||+|+|++||||||+|++|||+|+|||+|+..
T Consensus 92 ~~GI~vE~M~T~aAcrTyNiL~~EgR~VaAaLi~~~~ 128 (135)
T 2fvt_A 92 GVNVVLDTMQTGPAIRTYNIMIGERRRVAAALIAVPL 128 (135)
T ss_dssp TTTCEEEEECHHHHHHHHHHHHHHTSCEEEEEECCCT
T ss_pred HcCCEEEEeCHHHHHHHHHHHHhCCCcEEEEEcCCCc
Confidence 9999999999999999999999999999999999864
No 2
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=100.00 E-value=3.8e-44 Score=254.56 Aligned_cols=114 Identities=23% Similarity=0.326 Sum_probs=109.5
Q ss_pred cCCceeEEcCCcEEEcCEEEeecEEEeCCccccCCCCCCCCCChhhhhchhhhCCCCcEEEEeecCCCCCCCHHHHHHHH
Q 033161 8 TMSPRISFASKGFTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIR 87 (126)
Q Consensus 8 ~~~~I~~y~~g~~~I~g~~y~g~vi~~~~~v~~W~~~~~~~i~~~~l~~l~~l~~~pevliiGTG~~~~~~~~~~~~~l~ 87 (126)
..++|++|++|+|+|||++|.||++++|+++.+|++++ +++++++++.|..+.|+||+||||||.++++++|+++++|+
T Consensus 14 ~~~~I~~y~~g~f~i~g~~~~g~i~v~p~~~~~W~~~~-~~l~~~~l~~l~~~~p~pevliiGtG~~~~~l~p~~~~~l~ 92 (128)
T 2fi9_A 14 GRAPIDAYGNGGFRFADMSHRGSIICIPSGIYGIDMTG-PVPTQEDISRVLEESDQIEVLLIGTGVELLRLPEELRVLLW 92 (128)
T ss_dssp SCCCEEEEETTEEEETTEEEESEEEEETTEEEEECCSS-SSCCTGGGHHHHHTGGGCSEEEEECTTSCCCCCHHHHHHHH
T ss_pred CCceEEEEcCCEEEECCEEEEeCEEEeCCCeeccCCCc-CCCCHHHHHHHHhcCCCCCEEEECCCCCCCCCCHHHHHHHH
Confidence 44579999999999999999999999999999999999 99999999988788889999999999999999999999999
Q ss_pred HcCCeEEEeChHHHHHHHHHhhhccceeEEEeecC
Q 033161 88 STGMKLEAIDSRNAASTYNILNEEGRIVAAALLPY 122 (126)
Q Consensus 88 ~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~ 122 (126)
++||++|+|+|++||||||+|++|||+|+|||||+
T Consensus 93 ~~GI~vE~m~T~aAcrtyNiL~~EgR~VaaaLi~~ 127 (128)
T 2fi9_A 93 EKRISSDTMSTGAAVRTFNVLLAEDRAVAALLFAV 127 (128)
T ss_dssp HTTCEEEEECHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HcCCEEEEeCHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 99999999999999999999999999999999995
No 3
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=100.00 E-value=1.1e-43 Score=253.49 Aligned_cols=115 Identities=23% Similarity=0.360 Sum_probs=108.2
Q ss_pred cCCceeEEcCCcEEEcCEEEeecEEEeCCcc-ccCCCCCCCCCChhhhhchhhhCCCCcEEEEeecCCCCCCCHHHHHHH
Q 033161 8 TMSPRISFASKGFTVNGVQYEGSLLCIGNLL-LSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFI 86 (126)
Q Consensus 8 ~~~~I~~y~~g~~~I~g~~y~g~vi~~~~~v-~~W~~~~~~~i~~~~l~~l~~l~~~pevliiGTG~~~~~~~~~~~~~l 86 (126)
..++|++|++|+|+|||++|.||++++|+++ +.|++++++++++++++. +++++||+||||||.++++++|+++++|
T Consensus 10 ~~~~I~~y~~g~f~i~g~~~~g~ilv~p~~~v~~W~~~~~~~l~~e~l~~--ll~~~pevliiGTG~~~~~l~p~~~~~l 87 (132)
T 2gm2_A 10 YTYALRAADGRHAKVNEQILQQSFILMPDELVEHWPVPSLGQLQPAHMDA--VLALNPAVILLGTGERQQFPSTDVLAAC 87 (132)
T ss_dssp CCCCEEEECSSCEEETTEEECSEEEECSSCEECCCCCSSGGGCCTTTSHH--HHHHCCSEEEEECTTSCCCCCHHHHHHH
T ss_pred CCceEEEEcCCEEEECCEEEEeCEEEeCCCceeecCCCCcccCCHHHHHH--HHhcCCCEEEECCCCCCCcCCHHHHHHH
Confidence 3456999999999999999999999999997 999999999999999995 4556699999999999999999999999
Q ss_pred HHcCCeEEEeChHHHHHHHHHhhhccceeEEEeecCcc
Q 033161 87 RSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLPYGV 124 (126)
Q Consensus 87 ~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~~~ 124 (126)
+++||++|+|+|++||||||+|++|||+|+|||+|+..
T Consensus 88 ~~~GI~vE~m~T~aAcrTyNiL~~EgR~VaAaLi~~~~ 125 (132)
T 2gm2_A 88 LTRGIGLEAMTNAAAARTYNVLASEGRRVALAMIVGGL 125 (132)
T ss_dssp HHHTCEEEEECHHHHHHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHcCCEEEEeCHHHHHHHHHHHHhCCCcEEEEEccCCh
Confidence 99999999999999999999999999999999999865
No 4
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=100.00 E-value=2.5e-42 Score=250.68 Aligned_cols=119 Identities=31% Similarity=0.453 Sum_probs=108.4
Q ss_pred CcCCceeEEcCCcEEEcCEEEeecEEEeCCcc-ccCCCCCCCCCChhhhhchhhhCC----------------------C
Q 033161 7 LTMSPRISFASKGFTVNGVQYEGSLLCIGNLL-LSWTPKKFSEITPNCLSIFQLVRP----------------------I 63 (126)
Q Consensus 7 ~~~~~I~~y~~g~~~I~g~~y~g~vi~~~~~v-~~W~~~~~~~i~~~~l~~l~~l~~----------------------~ 63 (126)
...+.|++|++|+|+|||++|.||++++|+++ ..|+++++++++.++|+.+..+.+ +
T Consensus 9 ~~~~~I~~Y~~g~~~ing~~~~gsv~v~p~g~v~~W~~~~~~~i~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~ 88 (150)
T 3cpk_A 9 TALNTVTAYGDGYIEVNQVRFSHAIAFAPEGPVASWPVQRPADITASLLQQAAGLAEVVRDPLAFLDEPEAGAGARPANA 88 (150)
T ss_dssp CCCCCEEEEETTEEEETTEEECSCEEECSSSCCEECCCSSGGGCCHHHHHHHHTCC-----------------------C
T ss_pred CCCceEEEEcCCEEEECCEEEEcCEEEecCCceeecCCCChhhCCHHHHHHHHhcccccccchhhccccccccccccCCC
Confidence 34567999999999999999999999999885 999999999999999997666644 8
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeecCccC
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLPYGVS 125 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~~~~ 125 (126)
||+||||||.++++++++++++|+++||+||+|+|++||||||+|++|||+|+|||+|+.-|
T Consensus 89 pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~aA~rTyNiL~~EgRrVaaaLi~~~~~ 150 (150)
T 3cpk_A 89 PEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQAAARTYNILMAEGRRVVVALLPDGDS 150 (150)
T ss_dssp CSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHHHHHHHHHHHHHTTCCEEEEECCC---
T ss_pred CCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHHHHHHHHHHHHhCCCcEEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999997643
No 5
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=100.00 E-value=3.4e-41 Score=237.79 Aligned_cols=109 Identities=16% Similarity=0.230 Sum_probs=104.5
Q ss_pred ceeEEcCCcEEEcCEEEee-cEEEeCCccccCC-----CCCCCCCChhhhhchhhhCCCCcEEEEeecCCCCC-CCHHHH
Q 033161 11 PRISFASKGFTVNGVQYEG-SLLCIGNLLLSWT-----PKKFSEITPNCLSIFQLVRPIPEILILGCGRYIEP-VNPELR 83 (126)
Q Consensus 11 ~I~~y~~g~~~I~g~~y~g-~vi~~~~~v~~W~-----~~~~~~i~~~~l~~l~~l~~~pevliiGTG~~~~~-~~~~~~ 83 (126)
.|++|++|+|+|||++|.+ |++++|+++.+|+ .+++++++++|++. +++++||+||||||.+.++ ++|+++
T Consensus 5 ~I~~y~~g~~~ing~~~~~~siiv~p~~~~~w~w~~~g~~~~~~l~~~~l~~--ll~~~~evliiGtG~~~~~~~~~~~~ 82 (122)
T 2ab1_A 5 EIASLSWGQMKVKGSNTTYKDCKVWPGGSRTWDWRETGTEHSPGVQPADVKE--VVEKGVQTLVIGRGMSEALKVPSSTV 82 (122)
T ss_dssp CEEEEETTEEEETTCSCEESEEEEETTEEEEECHHHHTCCSSSCCCHHHHHH--HHTTCCSEEEEEECSSCCSCCCHHHH
T ss_pred EEEEEcCCEEEECCEEEeCCCEEEECCccccCcccccCcCChhHCCHHHHHH--HhhCCCCEEEECCCCCCccCCCHHHH
Confidence 4999999999999999999 9999999999998 88899999999995 6789999999999999997 999999
Q ss_pred HHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeec
Q 033161 84 QFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 121 (126)
Q Consensus 84 ~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~ 121 (126)
++|+++||++|+|+|++||||||+|++|||+|+|||+.
T Consensus 83 ~~l~~~gI~ve~m~T~~A~rtyN~L~~EgR~VaAal~~ 120 (122)
T 2ab1_A 83 EYLKKHGIDVRVLQTEQAVKEYNALVAQGVRVGGVFHS 120 (122)
T ss_dssp HHHHHTTCEEEEECHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHcCCEEEEeCHHHHHHHHHHHHhCCCcEEEEEee
Confidence 99999999999999999999999999999999999985
No 6
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii} SCOP: c.103.1.1
Probab=100.00 E-value=3.2e-38 Score=221.43 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=97.0
Q ss_pred ceeEEcCCcEEEcCEEEeecEEEeCCcc---ccCCCCC-----CCCCChhhhhchhhhCCCCcEEEEeecCCC-CCCCHH
Q 033161 11 PRISFASKGFTVNGVQYEGSLLCIGNLL---LSWTPKK-----FSEITPNCLSIFQLVRPIPEILILGCGRYI-EPVNPE 81 (126)
Q Consensus 11 ~I~~y~~g~~~I~g~~y~g~vi~~~~~v---~~W~~~~-----~~~i~~~~l~~l~~l~~~pevliiGTG~~~-~~~~~~ 81 (126)
+|++|++|+|+|||++|++|++++|+++ .+|++.. +++++++|++. +++.+||+||||||.++ .+++++
T Consensus 2 ~I~~yg~G~~~i~g~~~~~sviv~p~g~v~~~~w~~~~~~~gt~~~l~~~~~~~--ll~~~~evlliGTG~~~~~~~~~~ 79 (118)
T 2cyj_A 2 KIEEVRFGLVKIDGKEFDHDIVIYPSGRIERRMKEISKKKHGTSHKLDPEELEK--YLVEDFDVLLVGTGIYGMLSLLPE 79 (118)
T ss_dssp CEEEEETTEEEETTEEESSCEEECTTSCEEECCTHHHHHHHSSTTEECHHHHHT--TTTSCCSEEEEEECTTCCCEECHH
T ss_pred ceeEecCCEEEECCEEEeeCEEEeCCCcccccccCccccccCCcccCCHHHHHH--HHhcCCCEEEECCCCCccccCCHH
Confidence 4999999999999999999999999997 7776654 68899999994 66777999999999995 789999
Q ss_pred HHHHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeec
Q 033161 82 LRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 121 (126)
Q Consensus 82 ~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~ 121 (126)
++++|+++ ++|+|+|++||||||+|+ |||+|+|||..
T Consensus 80 ~~~~l~~~--~ve~M~T~aAcrTYNiL~-EgRrV~aalh~ 116 (118)
T 2cyj_A 80 SKKLVEDK--EVIEKPTKEALKLLEELW-GKKRILAIIHV 116 (118)
T ss_dssp HHHHTTTS--EEEEECHHHHHHHHHHHB-TTBCEEEEEEC
T ss_pred HHHHHHHC--CcEEeCHHHHHHHHHHHh-cCCeEEEEEec
Confidence 99999999 999999999999999999 99999999963
No 7
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=100.00 E-value=4.5e-36 Score=209.16 Aligned_cols=101 Identities=18% Similarity=0.116 Sum_probs=88.6
Q ss_pred CceeEEcCCcEEEcCEEEeecEEEeCCcc---ccCCCCC-----CCCCChhhhhchhhhCCCCcEEEEeecCCC-CCCCH
Q 033161 10 SPRISFASKGFTVNGVQYEGSLLCIGNLL---LSWTPKK-----FSEITPNCLSIFQLVRPIPEILILGCGRYI-EPVNP 80 (126)
Q Consensus 10 ~~I~~y~~g~~~I~g~~y~g~vi~~~~~v---~~W~~~~-----~~~i~~~~l~~l~~l~~~pevliiGTG~~~-~~~~~ 80 (126)
.+|++|++|+|+|||++|.+|++++|+++ .+|++.. +++++++|++. +++.+||+||||||.++ ..+++
T Consensus 2 ~~I~~yg~G~~~i~g~~~~~sviv~p~g~v~~~~w~~~~~~~gt~~~l~~~~~~~--ll~~~~evlliGTG~~~~~~~~~ 79 (113)
T 1ihn_A 2 HMFSDCRFGSVTYRGREYRSDIVVHVDGSVTPRRKEISRRKYGTSHVMAEEELEE--LLEEKPESIIIGSGVHGALETGF 79 (113)
T ss_dssp CCEEEEETTEEEETTEEECSCEEECTTSCEEECCHHHHHHHHSSTTEECTHHHHH--HHTTCCSEEEEECCTTCCCEESS
T ss_pred CceeEEcCCEEEECCEEEeeCEEEeCCCcccccccCccccccCccccCCHHHHHH--HHhcCCCEEEECCCCCccccCCh
Confidence 36999999999999999999999999987 7666553 68899999994 66677999999999995 45667
Q ss_pred HHHHHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeec
Q 033161 81 ELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLP 121 (126)
Q Consensus 81 ~~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~ 121 (126)
+++ +|+|+|++||||||+|++|||+|+|||..
T Consensus 80 ~~~---------ve~M~T~aAcrTYNiL~~EgRrV~aalh~ 111 (113)
T 1ihn_A 80 RSD---------ATVLPTCEAIKRYNEERSAGRRVAAIIHV 111 (113)
T ss_dssp CCS---------CEEECHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hhE---------EEEcChHHHHHHHHHHHhCCCeEEEEEec
Confidence 665 99999999999999999999999999953
No 8
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=71.97 E-value=6.9 Score=28.33 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=27.0
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||...... +.+..+.|++.||.+-+++
T Consensus 55 i~~l~PDlIi~~~~~~----~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 55 ILAMKPTMLLVSELAQ----PSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHTTCCSEEEEETTCS----CHHHHHHHHHTTCEEEEEC
T ss_pred HHccCCCEEEEcCCcC----chhHHHHHHHcCCcEEEeC
Confidence 5566799988765432 4678899999999999885
No 9
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=70.95 E-value=2.7 Score=30.07 Aligned_cols=47 Identities=15% Similarity=0.382 Sum_probs=36.1
Q ss_pred EEEEeecCCCCCCCHHH--HHHHHHcCCeEEEeChHHHHHHHHHhhhcc
Q 033161 66 ILILGCGRYIEPVNPEL--RQFIRSTGMKLEAIDSRNAASTYNILNEEG 112 (126)
Q Consensus 66 vliiGTG~~~~~~~~~~--~~~l~~~GI~vE~m~T~aAcrTyN~L~sEg 112 (126)
++++||-+...+.|-.+ ...|+++|+.+-+-.|++|++.--+-=-||
T Consensus 10 LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlevaDPe~ 58 (157)
T 1kjn_A 10 LMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVADPEG 58 (157)
T ss_dssp EEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHSTTC
T ss_pred eEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheeccCCCc
Confidence 68899988766666555 558899999999999999998755433333
No 10
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=66.78 E-value=3.6 Score=27.82 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=25.8
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
.||+|||-|..-. .+...|.++|+.|.+.+-
T Consensus 3 ~dV~IIGaGpaGL----~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGL----SAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHHH----HHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHH----HHHHHHHHCCCCEEEEEC
Confidence 6899999998732 667789999999999874
No 11
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=66.55 E-value=21 Score=25.72 Aligned_cols=35 Identities=9% Similarity=0.089 Sum_probs=26.6
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||..... .+++..+.|++.||.+.+++
T Consensus 55 i~~l~PDLIi~~~~~----~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 55 ILSLRPDSVITWQDA----GPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHTTCCSEEEEETTC----SCHHHHHHHHHTTCEEEEEC
T ss_pred HHccCCCEEEEcCCC----CCHHHHHHHHHcCCcEEEec
Confidence 445679998875431 35788999999999988874
No 12
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=63.42 E-value=7.8 Score=29.19 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=27.2
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
++.-+||+||.+.. .+++..+.|++.||.+-+++.
T Consensus 80 i~~l~PDlIi~~~~-----~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 80 LLALKPDVVFVTNY-----APSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHHTCCSEEEEETT-----CCHHHHHHHHTTTCCEEEECS
T ss_pred HHccCCCEEEEeCC-----CChHHHHHHHHcCCCEEEEec
Confidence 44567999887642 257889999999999999864
No 13
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=62.87 E-value=6.4 Score=29.05 Aligned_cols=45 Identities=11% Similarity=-0.003 Sum_probs=38.0
Q ss_pred cEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhh
Q 033161 65 EILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILN 109 (126)
Q Consensus 65 evliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~ 109 (126)
.+++--||..-..-..++.+.|++.|..|.+.=|++|++..+-+.
T Consensus 6 ~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T~~A~~fi~~et 50 (209)
T 3zqu_A 6 RITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATET 50 (209)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHC
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECccHHHHHHHHh
Confidence 466666888766668899999999999999999999999987653
No 14
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=62.28 E-value=8.2 Score=31.56 Aligned_cols=40 Identities=10% Similarity=0.285 Sum_probs=31.2
Q ss_pred hhchhhhCCCCcEEEEeecCC--CCCCCHHHHHHHHHcCCeEEE
Q 033161 54 LSIFQLVRPIPEILILGCGRY--IEPVNPELRQFIRSTGMKLEA 95 (126)
Q Consensus 54 l~~l~~l~~~pevliiGTG~~--~~~~~~~~~~~l~~~GI~vE~ 95 (126)
.+.|+.+. |++.||.+|.. ...|++++.+.|+++|+.+-.
T Consensus 238 ~~fl~~v~--P~~aiiS~g~~n~~~hP~~evl~~l~~~g~~v~~ 279 (547)
T 2bib_A 238 KDFIKNLS--PSLIVQTSDSLPWKNGVDSEYVNWLKERGIERIN 279 (547)
T ss_dssp HHHHHHHC--CSEEEESBSSCSBSSSBCHHHHHHHHTTTCEEEE
T ss_pred HHHHHhcC--CcEEEEcCCcccccCCCCHHHHHHHHhCCceEEE
Confidence 34555655 88999999986 346899999999999987654
No 15
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=61.36 E-value=12 Score=24.95 Aligned_cols=46 Identities=7% Similarity=0.081 Sum_probs=31.3
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh--HHHHHHHHHhhhcc
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS--RNAASTYNILNEEG 112 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T--~aAcrTyN~L~sEg 112 (126)
+..++|+|.|.- ...+.+.|.+.|..|-+.+. ++.|+.......+|
T Consensus 3 ~~~vlI~G~G~v----G~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~ 50 (153)
T 1id1_A 3 KDHFIVCGHSIL----AINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN 50 (153)
T ss_dssp CSCEEEECCSHH----HHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT
T ss_pred CCcEEEECCCHH----HHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCC
Confidence 456899998864 45778888889999988865 34555554333333
No 16
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=61.28 E-value=4.5 Score=26.75 Aligned_cols=37 Identities=14% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHH
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRN 100 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~a 100 (126)
+++|++++| .+.++.-+++++...++|+.|++.+...
T Consensus 52 ~~~DvvLLg--PQV~y~~~~ik~~~~~~~ipV~vI~~~~ 88 (108)
T 3nbm_A 52 GVYDLIILA--PQVRSYYREMKVDAERLGIQIVATRGME 88 (108)
T ss_dssp GGCSEEEEC--GGGGGGHHHHHHHHTTTTCEEEECCHHH
T ss_pred cCCCEEEEC--hHHHHHHHHHHHHhhhcCCcEEEeCHHH
Confidence 468999996 5666777899999989999999999754
No 17
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=61.02 E-value=8.8 Score=29.22 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=26.2
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||...+ .++..+.|++.||.+-+++
T Consensus 112 i~al~PDLIi~~~~------~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 112 CVAATPDVVFLPMK------LKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp HHHTCCSEEEEEGG------GHHHHHHHHHTTCCEEEEC
T ss_pred HHhcCCCEEEEeCc------chhHHHHHHHcCCCEEEEc
Confidence 44557999887653 4688899999999999986
No 18
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=57.82 E-value=2.5 Score=37.58 Aligned_cols=54 Identities=9% Similarity=0.131 Sum_probs=37.7
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH--------------HHHHHHHHhhhccceeE
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR--------------NAASTYNILNEEGRIVA 116 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~--------------aAcrTyN~L~sEgR~Va 116 (126)
.||++|++||.....-.-+..+.|++.||.+.|.+.. .+.+.|..+...++.+.
T Consensus 659 ~~DVvLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i 726 (845)
T 3ahc_A 659 EVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVL 726 (845)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEE
T ss_pred CCCEEEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcce
Confidence 4999999999765444456778899999999886321 14556666666555554
No 19
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=57.24 E-value=8.5 Score=27.81 Aligned_cols=43 Identities=19% Similarity=0.112 Sum_probs=36.1
Q ss_pred cEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHH
Q 033161 65 EILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNI 107 (126)
Q Consensus 65 evliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~ 107 (126)
.+++--||..-..-..++.+.|++.|+.|.+.=|++|.+....
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 3667778887555678888999999999999999999998886
No 20
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=55.86 E-value=18 Score=26.65 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=26.5
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||..... -+++..+.|++.||.+-+++
T Consensus 55 i~~l~PDLIi~~~~~----~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 55 VLALRPDILIGTEEM----GPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp HHTTCCSEEEECTTC----CCHHHHHHHHHTTCCEEECC
T ss_pred HHhcCCCEEEEeCcc----CcHHHHHHHHHcCCcEEEec
Confidence 445679999875422 35788999999999988874
No 21
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=52.73 E-value=16 Score=26.20 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=26.1
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||.... ..+++..+.|++.||.+-+++
T Consensus 53 i~~l~PDLIi~~~~----~~~~~~~~~L~~~gipvv~~~ 87 (245)
T 1n2z_A 53 IVALKPDLVIAWRG----GNAERQVDQLASLGIKVMWVD 87 (245)
T ss_dssp HHHTCCSEEEECTT----TSCHHHHHHHHHHTCCEEECC
T ss_pred HhccCCCEEEEeCC----CCcHHHHHHHHHCCCcEEEeC
Confidence 44556999887421 235788999999999998875
No 22
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=50.74 E-value=6.6 Score=25.96 Aligned_cols=35 Identities=9% Similarity=0.103 Sum_probs=26.2
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.+.|++|+++|.... .-.+..+.|++.|+.+.+++
T Consensus 12 ~g~dv~iv~~Gs~~~-~a~eA~~~L~~~Gi~v~vi~ 46 (118)
T 3ju3_A 12 KEADITFVTWGSQKG-PILDVIEDLKEEGISANLLY 46 (118)
T ss_dssp SSCSEEEEEEGGGHH-HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEEECccHH-HHHHHHHHHHHCCCceEEEE
Confidence 568999999998643 33445567888999888874
No 23
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=49.87 E-value=10 Score=27.48 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=25.1
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||...+ .++++.+.|++.||.+.+++
T Consensus 56 i~~l~PDLIi~~~~-----~~~~~~~~L~~~gipvv~~~ 89 (260)
T 2q8p_A 56 VKKLKPTHVLSVST-----IKDEMQPFYKQLNMKGYFYD 89 (260)
T ss_dssp HHHTCCSEEEEEGG-----GHHHHHHHHHHHTSCCEEEC
T ss_pred HHhcCCCEEEecCc-----cCHHHHHHHHHcCCcEEEec
Confidence 44556999887643 24678899999999887765
No 24
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=49.35 E-value=30 Score=22.37 Aligned_cols=40 Identities=8% Similarity=0.164 Sum_probs=31.8
Q ss_pred hhhCCCCcEEEEe-ecCCCC-CCCHHHHHHHHHcCCeEEEeC
Q 033161 58 QLVRPIPEILILG-CGRYIE-PVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 58 ~~l~~~pevliiG-TG~~~~-~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+.+...=+++++- .|.... -+..++.+.+++.|+.+|+.+
T Consensus 74 ~~~~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 74 ELLEEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp HHHHTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeC
Confidence 3444556899998 799944 577889999999999999875
No 25
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=49.14 E-value=5.4 Score=30.75 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=28.0
Q ss_pred hCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 60 VRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+..+.|++||++|... ....+..+.|++.||.+++.+
T Consensus 199 ~~~g~dv~iva~G~~~-~~a~~Aa~~L~~~Gi~v~vi~ 235 (324)
T 1umd_B 199 RREGKDLTLICYGTVM-PEVLQAAAELAKAGVSAEVLD 235 (324)
T ss_dssp EECCSSEEEEECGGGH-HHHHHHHHHHHHTTCCEEEEE
T ss_pred EecCCCEEEEEecHHH-HHHHHHHHHHHhcCCCEEEEE
Confidence 3457899999999864 234556677888999988874
No 26
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=48.17 E-value=15 Score=26.63 Aligned_cols=45 Identities=13% Similarity=0.119 Sum_probs=37.2
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHh
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNIL 108 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L 108 (126)
..+++--||.....-.+++.+.|++.|..|.+.=|++|.+...-+
T Consensus 9 k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 53 (194)
T 1p3y_1 9 KKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLIPAH 53 (194)
T ss_dssp CEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEECHHHHHHSCHH
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 467888888886556789999999999999999999999875543
No 27
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=48.14 E-value=6.6 Score=33.63 Aligned_cols=35 Identities=14% Similarity=0.451 Sum_probs=28.0
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
+|++||++|... ...-+..+.|++.||.+++.+..
T Consensus 563 ~dv~iva~G~~v-~~al~Aa~~L~~~Gi~v~Vv~~~ 597 (675)
T 1itz_A 563 PDLIVMGTGSEL-EIAAKAADELRKEGKTVRVVSFV 597 (675)
T ss_dssp CSEEEEECGGGH-HHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEEEECHHH-HHHHHHHHHHHhcCCcEEEEEec
Confidence 999999999864 34456677889999999998643
No 28
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=44.95 E-value=6.7 Score=30.23 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=28.3
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.+..+.|++||++|.... ...+..+.|++.||.+++.+
T Consensus 197 ~~~~g~dv~iva~G~~~~-~a~~Aa~~L~~~Gi~v~vi~ 234 (324)
T 1w85_B 197 IKREGKDITIIAYGAMVH-ESLKAAAELEKEGISAEVVD 234 (324)
T ss_dssp EEECCSSEEEEECTTHHH-HHHHHHHHHHHTTCCEEEEE
T ss_pred EEecCCCEEEEEecHHHH-HHHHHHHHHHhcCCCEEEEE
Confidence 334568999999998642 34556677888899888874
No 29
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=44.85 E-value=18 Score=26.59 Aligned_cols=42 Identities=14% Similarity=-0.046 Sum_probs=28.6
Q ss_pred cEEEEeecCCCCCC-CHHHHHHHHHcCCeEEEeChHHHHHHHH
Q 033161 65 EILILGCGRYIEPV-NPELRQFIRSTGMKLEAIDSRNAASTYN 106 (126)
Q Consensus 65 evliiGTG~~~~~~-~~~~~~~l~~~GI~vE~m~T~aAcrTyN 106 (126)
.+++-=||.....- ..++.+.|++.|..|.+.=|++|.++.+
T Consensus 7 ~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl~ 49 (207)
T 3mcu_A 7 RIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNT 49 (207)
T ss_dssp EEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC-------
T ss_pred EEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHHH
Confidence 46666788654444 7899999999999999999999995543
No 30
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=44.69 E-value=20 Score=22.82 Aligned_cols=50 Identities=10% Similarity=0.228 Sum_probs=34.1
Q ss_pred CChhhhhchhhhCCCCcEEEEeecCC---CCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 49 ITPNCLSIFQLVRPIPEILILGCGRY---IEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 49 i~~~~l~~l~~l~~~pevliiGTG~~---~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
++++.-+.++-+-....++|++++.. .-.....+++.|.++|+.++..+.
T Consensus 3 ~s~~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI 55 (109)
T 3ipz_A 3 LTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNI 55 (109)
T ss_dssp CCHHHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEG
T ss_pred CCHHHHHHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEEC
Confidence 34433333333334567999988853 235668999999999999998765
No 31
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=44.67 E-value=38 Score=26.98 Aligned_cols=43 Identities=30% Similarity=0.412 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHcCCeEEEeC---------------------------hHHHHHHHHHhhhccceeEEE
Q 033161 76 EPVNPELRQFIRSTGMKLEAID---------------------------SRNAASTYNILNEEGRIVAAA 118 (126)
Q Consensus 76 ~~~~~~~~~~l~~~GI~vE~m~---------------------------T~aAcrTyN~L~sEgR~Vaaa 118 (126)
+..++++.+.|+++||.+.... ++++|+.-|.-.++|+||+|.
T Consensus 187 LHFt~~Ll~~L~~kGv~~a~vTLHVG~GTF~PV~e~i~~H~MHsE~~~V~~~ta~~in~aka~G~RViAV 256 (345)
T 1wdi_A 187 LHFTPELLERLREMGVELRFLTLHVGPGTFRPVKGDPEKHEMHAEPYAIPEEVAEAVNRAKAEGRRVVAV 256 (345)
T ss_dssp GGCCHHHHHHHHHTTCEEEEEEEEESGGGCCC---------CCCEEEEECHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCHHHHHHHHHCCCeEEEEEEeecCCCCcccccchhcCCccceEEEECHHHHHHHHHHHHcCCeEEEE
Confidence 4577888888888888776542 468889999999999999874
No 32
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=44.58 E-value=7.8 Score=33.46 Aligned_cols=36 Identities=11% Similarity=0.329 Sum_probs=27.7
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
++|+.||++|... ...-+..+.|++.||.+++.+.+
T Consensus 576 ~~dvtiia~G~~v-~~Al~Aa~~L~~~GI~~~Vid~~ 611 (690)
T 3m49_A 576 TADVILLATGSEV-SLAVEAQKALAVDGVDASVVSMP 611 (690)
T ss_dssp SCSEEEEECTTHH-HHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCEEEEEechHH-HHHHHHHHHHHhcCCCeEEEecc
Confidence 3699999999753 23445667899999999998655
No 33
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=44.57 E-value=58 Score=20.78 Aligned_cols=37 Identities=22% Similarity=0.169 Sum_probs=26.9
Q ss_pred CCCCcEEEEe-----ecCC--CCCCCHHHHHHHHHcCCeEEEeC
Q 033161 61 RPIPEILILG-----CGRY--IEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 61 ~~~pevliiG-----TG~~--~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+.+++.+|+| -|.. ...-..+..+.|+++++.|+..|
T Consensus 49 e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~D 92 (98)
T 1iv0_A 49 REGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWD 92 (98)
T ss_dssp HHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEEC
T ss_pred HcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3579999999 5554 33566777888877788887765
No 34
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=44.53 E-value=7.3 Score=33.77 Aligned_cols=36 Identities=6% Similarity=0.298 Sum_probs=27.8
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
++|+.||++|... ...-+..+.|++.||.+++.+.+
T Consensus 584 ~~dvtiia~G~~v-~~al~Aa~~L~~~Gi~~~VVd~~ 619 (700)
T 3rim_A 584 EPDVILIATGSEV-QLAVAAQTLLADNDILARVVSMP 619 (700)
T ss_dssp CCSEEEEECGGGH-HHHHHHHHHHHTTTCCEEEEECS
T ss_pred CCCEEEEEechHH-HHHHHHHHHHHhcCCCeEEEEec
Confidence 3699999999754 23445667899999999998765
No 35
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=44.00 E-value=7.1 Score=33.37 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=28.0
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
+|++||++|... ...-+..+.|++.||.+++.+..
T Consensus 550 ~dv~iva~G~~v-~~al~Aa~~L~~~Gi~~~Vv~~~ 584 (669)
T 2r8o_A 550 PELIFIATGSEV-ELAVAAYEKLTAEGVKARVVSMP 584 (669)
T ss_dssp CSEEEEECGGGH-HHHHHHHHHHHHHTCCEEEEECS
T ss_pred CCEEEEEECHHH-HHHHHHHHHHHhcCCCeEEEEec
Confidence 999999999864 34456677888899999998643
No 36
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=43.80 E-value=21 Score=28.28 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=24.4
Q ss_pred hhhhchhhhCCCCcEEEEeecCCCCCCC----HHHHHHHHHcCCeE
Q 033161 52 NCLSIFQLVRPIPEILILGCGRYIEPVN----PELRQFIRSTGMKL 93 (126)
Q Consensus 52 ~~l~~l~~l~~~pevliiGTG~~~~~~~----~~~~~~l~~~GI~v 93 (126)
.+++ +.++.+||++|+|+-...-+++ +.+.+++ ++|+.|
T Consensus 64 ~~l~--~al~~~~d~lvig~a~~gG~l~~~~~~~i~~Al-~~G~~V 106 (349)
T 2obn_A 64 KSVE--AALEYKPQVLVIGIAPKGGGIPDDYWIELKTAL-QAGMSL 106 (349)
T ss_dssp SSHH--HHGGGCCSEEEECCCCCCC-SCGGGHHHHHHHH-HTTCEE
T ss_pred CCHH--HHHhCCCCEEEEEecCCCCCCCHHHHHHHHHHH-HcCCcE
Confidence 5555 3556679999999944433455 3344444 588888
No 37
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=43.65 E-value=18 Score=26.33 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=35.5
Q ss_pred EEEEeecCCCCCCCHHHHHHHHHc-CCeEEEeChHHHHHHHHHh
Q 033161 66 ILILGCGRYIEPVNPELRQFIRST-GMKLEAIDSRNAASTYNIL 108 (126)
Q Consensus 66 vliiGTG~~~~~~~~~~~~~l~~~-GI~vE~m~T~aAcrTyN~L 108 (126)
+++--||.....-..++.+.|++. |..|.+.=|++|++..+.+
T Consensus 3 IllgvTGsiaa~k~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 3 LIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred EEEEEeChHHHHHHHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 455567777555578889999998 9999999999999998865
No 38
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=43.65 E-value=7.2 Score=33.30 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=27.8
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
.+|+.||++|... ...-+..+.|++.||.+++.+.+
T Consensus 525 g~dvtiia~G~~v-~~al~Aa~~L~~~Gi~~~Vi~~~ 560 (632)
T 3l84_A 525 EAKFTLLASGSEV-WLCLESANELEKQGFACNVVSMP 560 (632)
T ss_dssp TCSEEEEECGGGH-HHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCEEEEEechHH-HHHHHHHHHHHhcCCCeEEEecC
Confidence 6899999999743 23445667899999999998543
No 39
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=43.47 E-value=84 Score=22.61 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=34.0
Q ss_pred CCcEEEEeecCCCC-CC-CHHHHHHHHHcCCeEEEeChHHHHHHHHHhhh-ccc
Q 033161 63 IPEILILGCGRYIE-PV-NPELRQFIRSTGMKLEAIDSRNAASTYNILNE-EGR 113 (126)
Q Consensus 63 ~pevliiGTG~~~~-~~-~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~s-EgR 113 (126)
++..+|+|.-.... .+ -.+-.+.|++.||.|++|+-++-..-|+.-+. .+|
T Consensus 110 gI~rVV~~~~d~~~~~p~~~~g~~~L~~aGI~V~~~~~~e~~~~w~~fv~~~~~ 163 (190)
T 2nyt_A 110 NLRLLILVGRLFMWEEPEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEG 163 (190)
T ss_pred CccEEEEEeecCCcCChHHHHHHHHHHHCCCEEEEecHHHHHHHHHHHHHccCC
Confidence 78888888754421 11 13567889999999999988765555555555 444
No 40
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=43.14 E-value=8.2 Score=32.87 Aligned_cols=35 Identities=11% Similarity=0.384 Sum_probs=28.0
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
+|++||++|... ...-+..+.|++.||.+++.+..
T Consensus 542 ~dv~iva~G~~v-~~al~Aa~~L~~~Gi~~~Vv~~~ 576 (651)
T 2e6k_A 542 PQGVLVATGSEV-HLALRAQALLREKGVRVRVVSLP 576 (651)
T ss_dssp CSEEEEECTTHH-HHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEEEECHHH-HHHHHHHHHHHhcCCcEEEEecC
Confidence 899999999864 34456677889999999998743
No 41
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=42.11 E-value=20 Score=27.10 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=27.5
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNA 101 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aA 101 (126)
+.+||+| |.+...-...+.++|++.|+.|+++++..+
T Consensus 5 ~~vLiV~-g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~ 41 (259)
T 3rht_A 5 TRVLYCG-DTSLETAAGYLAGLMTSWQWEFDYIPSHVG 41 (259)
T ss_dssp -CEEEEE-SSCTTTTHHHHHHHHHHTTCCCEEECTTSC
T ss_pred ceEEEEC-CCCchhHHHHHHHHHHhCCceEEEeccccc
Confidence 5788886 555444557788899999999999986543
No 42
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=40.57 E-value=26 Score=21.83 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=29.1
Q ss_pred CcEEEEeecCC---CCCCCHHHHHHHHHcCCeEEEeChHH
Q 033161 64 PEILILGCGRY---IEPVNPELRQFIRSTGMKLEAIDSRN 100 (126)
Q Consensus 64 pevliiGTG~~---~~~~~~~~~~~l~~~GI~vE~m~T~a 100 (126)
..++++.+|.. .-.....+++.|.++|+.++..+...
T Consensus 17 ~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~ 56 (105)
T 2yan_A 17 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE 56 (105)
T ss_dssp SSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred CCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC
Confidence 45888988764 33567899999999999998887653
No 43
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=40.26 E-value=6.6 Score=33.66 Aligned_cols=35 Identities=14% Similarity=0.385 Sum_probs=28.1
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
+|++||++|... ...-+..+.|++.||.+++.+..
T Consensus 555 ~dvtiva~G~~v-~~al~Aa~~L~~~Gi~~~Vvd~~ 589 (680)
T 1gpu_A 555 PDIILVATGSEV-SLSVEAAKTLAAKNIKARVVSLP 589 (680)
T ss_dssp CSEEEEECTHHH-HHHHHHHHHHHTTTCCEEEEECS
T ss_pred CCEEEEEEcHHH-HHHHHHHHHHHhcCCCEEEEEcC
Confidence 899999999864 34456677889999999998643
No 44
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=40.19 E-value=41 Score=26.86 Aligned_cols=43 Identities=16% Similarity=0.319 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHcCCeEEEeC----------------------------hHHHHHHHHHhhhccceeEEE
Q 033161 76 EPVNPELRQFIRSTGMKLEAID----------------------------SRNAASTYNILNEEGRIVAAA 118 (126)
Q Consensus 76 ~~~~~~~~~~l~~~GI~vE~m~----------------------------T~aAcrTyN~L~sEgR~Vaaa 118 (126)
+..++++.+.|+++||.+.... ++++|+.-|.-.++|+||+|.
T Consensus 189 LHFt~eLL~~L~~kGv~~a~vTLHVG~GTF~PV~~edi~~H~MHsE~~~V~~eta~~in~aka~G~RViAV 259 (347)
T 1vky_A 189 LHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKMHEEFYQVPKETVRKLRETRERGNRIVAV 259 (347)
T ss_dssp GGCCHHHHHHHHHHTCEEEEEEEEC------------------CCCEEEECHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHCCCcEEEEEEeecCCCCCCccccccccCCcccEEEEECHHHHHHHHHHHHcCCeEEEE
Confidence 4678999999999999876542 467888889888899999874
No 45
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=39.07 E-value=43 Score=26.70 Aligned_cols=43 Identities=23% Similarity=0.370 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHcCCeEEEeC----------------------------hHHHHHHHHHhhhccceeEEE
Q 033161 76 EPVNPELRQFIRSTGMKLEAID----------------------------SRNAASTYNILNEEGRIVAAA 118 (126)
Q Consensus 76 ~~~~~~~~~~l~~~GI~vE~m~----------------------------T~aAcrTyN~L~sEgR~Vaaa 118 (126)
+..++++.+.|+++||.+.... ++++|+.-|.-.++|+||+|.
T Consensus 186 LHFt~eLl~~L~~kGv~~a~vTLHVG~GTF~PV~~e~i~~H~MHsE~~~V~~~ta~~in~aka~G~RViAV 256 (346)
T 1yy3_A 186 LHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNMHAEFYQMSEETAAALNKVRENGGRIISV 256 (346)
T ss_dssp TCCCHHHHHHHHHHTEEEEECEEESGGGGGC-----------CCCEEEEECHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCHHHHHHHHHCCCeEEEEEEeecCCCCCCccccccccCCcccEEEEECHHHHHHHHHHHHcCCeEEEE
Confidence 5678999999999998876542 467889999999999999874
No 46
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=38.45 E-value=8.6 Score=30.02 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=27.9
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.+..+.|++||++|.... ...+..+.|++.|+.+.+.+
T Consensus 212 v~~~g~dv~iia~Gs~~~-~a~~Aa~~L~~~Gi~v~vv~ 249 (341)
T 2ozl_B 212 IERQGTHITVVSHSRPVG-HCLEAAAVLSKEGVECEVIN 249 (341)
T ss_dssp EEECCSSEEEEECSTHHH-HHHHHHHHHHTTTCCEEEEE
T ss_pred EeccCCCEEEEEeCHHHH-HHHHHHHHHHhcCCCeEEEe
Confidence 344578999999998642 34456677888899888774
No 47
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=38.35 E-value=8.9 Score=29.89 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=27.7
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHc-CCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRST-GMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~-GI~vE~m~ 97 (126)
.+..+.|++||++|... ...-+..+.|++. ||.+++.+
T Consensus 215 v~~~g~dv~iia~G~~~-~~a~~Aa~~L~~~~Gi~v~vi~ 253 (342)
T 2bfd_B 215 VIQEGSDVTLVAWGTQV-HVIREVASMAKEKLGVSCEVID 253 (342)
T ss_dssp EEECCSSEEEEECTTHH-HHHHHHHHHHHHHHCCCEEEEE
T ss_pred EeccCCCEEEEEECHHH-HHHHHHHHHHHhhcCCCEEEEe
Confidence 33456899999999864 2344556677777 99988874
No 48
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=38.33 E-value=17 Score=29.67 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=29.1
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI 96 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m 96 (126)
.++++|+..+.....-.-++.+.|+++||.+|++
T Consensus 419 ~~~V~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~ 452 (517)
T 4g85_A 419 ETQVLVASAQKKLLEERLKLVSELWDAGIKAELL 452 (517)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 5689999988876666678899999999999997
No 49
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=38.31 E-value=13 Score=28.29 Aligned_cols=59 Identities=14% Similarity=-0.054 Sum_probs=42.4
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeecCccC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLPYGVS 125 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~~~~ 125 (126)
++|++|--|... ...+..+++.++|+.+-+.+|+-.-..+..|.+-.+++ ..++.+++|
T Consensus 73 ~~DVVIDfT~p~---a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~~-~vv~a~N~s 131 (272)
T 4f3y_A 73 EADYLIDFTLPE---GTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKI-ALVFSANMS 131 (272)
T ss_dssp HCSEEEECSCHH---HHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTTS-EEEECSCCC
T ss_pred CCCEEEEcCCHH---HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhccC-CEEEECCCC
Confidence 599999877221 12345567788999999999887666777777766664 458888776
No 50
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=38.01 E-value=54 Score=24.21 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=28.5
Q ss_pred hhhhCCCCcEEEEee-----cCCCCCCCHHHHHHHHHcCCeEEEe
Q 033161 57 FQLVRPIPEILILGC-----GRYIEPVNPELRQFIRSTGMKLEAI 96 (126)
Q Consensus 57 l~~l~~~pevliiGT-----G~~~~~~~~~~~~~l~~~GI~vE~m 96 (126)
++.+ .+..++++.- +......+++.++.|+++|+.|-.-
T Consensus 61 ~e~~-~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~ 104 (201)
T 1vp8_A 61 LEMA-EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQ 104 (201)
T ss_dssp HHHC-TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEEC
T ss_pred HHHh-cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEE
Confidence 3444 4567888872 2335678999999999999998765
No 51
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=37.18 E-value=10 Score=27.15 Aligned_cols=43 Identities=21% Similarity=0.117 Sum_probs=34.0
Q ss_pred cEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHH
Q 033161 65 EILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNI 107 (126)
Q Consensus 65 evliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~ 107 (126)
.+++--||.....-..++.+.|++.|..|.+.=|++|.+..+.
T Consensus 7 ~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 7 NVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp EEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred EEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 4677778887655678888899999999999999999875543
No 52
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=36.78 E-value=13 Score=24.13 Aligned_cols=30 Identities=10% Similarity=0.042 Sum_probs=22.5
Q ss_pred EEEeecCCCCCCCHHHHHHHHHcCCeEEEe
Q 033161 67 LILGCGRYIEPVNPELRQFIRSTGMKLEAI 96 (126)
Q Consensus 67 liiGTG~~~~~~~~~~~~~l~~~GI~vE~m 96 (126)
++=|+|...-++-..+++.++++|+.+++-
T Consensus 8 l~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~ 37 (106)
T 1e2b_A 8 LFSSAGMSTSLLVSKMRAQAEKYEVPVIIE 37 (106)
T ss_dssp EECSSSTTTHHHHHHHHHHHHHSCCSEEEE
T ss_pred EECCCchhHHHHHHHHHHHHHHCCCCeEEE
Confidence 344566655567779999999999987765
No 53
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=36.65 E-value=20 Score=28.52 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=25.3
Q ss_pred EeecCCCCCCCHHHHHHHHHcCCeEEEeChHH
Q 033161 69 LGCGRYIEPVNPELRQFIRSTGMKLEAIDSRN 100 (126)
Q Consensus 69 iGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~a 100 (126)
||-|-.. .-+|++.+.++++||.+|+.+|.+
T Consensus 239 IgHG~~~-~~d~~L~~~l~~~~I~lEvCP~SN 269 (380)
T 4gxw_A 239 VDHGYTI-VDNPELCARYAERGIVFTVVPTNS 269 (380)
T ss_dssp EEECGGG-GGCHHHHHHHHHHTCEEEECTTCH
T ss_pred cccceee-ccChHHHHHHHHhCceeEECCcch
Confidence 4555543 347899999999999999999987
No 54
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=36.37 E-value=19 Score=27.80 Aligned_cols=67 Identities=13% Similarity=0.270 Sum_probs=44.7
Q ss_pred CCCCChhhhhchh-h-----hCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhhhcc
Q 033161 46 FSEITPNCLSIFQ-L-----VRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEG 112 (126)
Q Consensus 46 ~~~i~~~~l~~l~-~-----l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEg 112 (126)
...+++++.+... . -+-+||++|+..-....+=|...|+.|.++|+..-+..-...-+.=.-|-++|
T Consensus 41 GaKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~kd~l~~~g 113 (283)
T 1qv9_A 41 SVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLKVKDEMEEQG 113 (283)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGGGHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchhhHHHHHhcC
Confidence 5677888777311 1 13379999998866676667778999999999988885444433335554444
No 55
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=36.34 E-value=15 Score=29.25 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=28.8
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI 96 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m 96 (126)
.++++|+..+.....-.-++.+.|+++||.+|++
T Consensus 366 ~~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~ 399 (464)
T 4g84_A 366 ETQVLVASAQKKLLEERLKLVSELWDAGIKAELL 399 (464)
T ss_dssp CCCEEEECSSSSCHHHHHHHHHHHHHTTCCEECC
T ss_pred cceEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 5689999988876655678899999999999987
No 56
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=36.33 E-value=9.6 Score=33.04 Aligned_cols=35 Identities=9% Similarity=0.246 Sum_probs=26.8
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
+|+.||++|... ...-+..+.|++.||.+++.+.+
T Consensus 598 ~dvtiia~G~~v-~~al~Aa~~L~~~GI~~~Vid~~ 632 (711)
T 3uk1_A 598 RKIILIATGSEV-ELAMKAVEPLAQQGIAARVVSMP 632 (711)
T ss_dssp EEEEEEECTTHH-HHHHHHHHHHHHTTEEEEEEECS
T ss_pred CCEEEEEecHHH-HHHHHHHHHHHHcCCCeEEEecC
Confidence 899999999853 23345567888999999998643
No 57
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=36.20 E-value=11 Score=27.09 Aligned_cols=43 Identities=9% Similarity=-0.058 Sum_probs=35.1
Q ss_pred cEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHH
Q 033161 65 EILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNI 107 (126)
Q Consensus 65 evliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~ 107 (126)
.+++.-||.....-..++.+.|++.|..|.+.=|++|.+...-
T Consensus 4 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 4 KLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 4677778888666778889999999999999999999876544
No 58
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=35.89 E-value=20 Score=23.30 Aligned_cols=41 Identities=5% Similarity=-0.007 Sum_probs=31.1
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHH
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAA 102 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAc 102 (126)
.++|.+++..+......-.++.+.+.++|+.+.+++.-...
T Consensus 64 ~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~~~ 104 (141)
T 3nkl_A 64 HCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNLDDL 104 (141)
T ss_dssp HTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEECCCHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEECCCHHHH
Confidence 46899999987654334467788899999999999875543
No 59
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=35.33 E-value=61 Score=23.76 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=32.5
Q ss_pred CCcEEEEeecCCCC-CCCHHHHHHHHHcCCeEEEeChHHHHH
Q 033161 63 IPEILILGCGRYIE-PVNPELRQFIRSTGMKLEAIDSRNAAS 103 (126)
Q Consensus 63 ~pevliiGTG~~~~-~~~~~~~~~l~~~GI~vE~m~T~aAcr 103 (126)
+-+++++-.|.... -....+.+.+.++|+.+|+.+--+|.-
T Consensus 77 g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSs~~ 118 (265)
T 2z6r_A 77 ENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYS 118 (265)
T ss_dssp TSCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCCHHH
T ss_pred CCcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChhHHH
Confidence 45799999999955 466888999999999999996544443
No 60
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.28 E-value=42 Score=21.89 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=25.3
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh-HHHHH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS-RNAAS 103 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T-~aAcr 103 (126)
+..++|+|.|.- -..+.+.|++.|..|-+.+. ++.|+
T Consensus 7 ~~~viIiG~G~~----G~~la~~L~~~g~~v~vid~~~~~~~ 44 (140)
T 3fwz_A 7 CNHALLVGYGRV----GSLLGEKLLASDIPLVVIETSRTRVD 44 (140)
T ss_dssp CSCEEEECCSHH----HHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred CCCEEEECcCHH----HHHHHHHHHHCCCCEEEEECCHHHHH
Confidence 356899998873 34677777888888777754 33443
No 61
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=34.66 E-value=65 Score=24.45 Aligned_cols=34 Identities=9% Similarity=0.228 Sum_probs=24.0
Q ss_pred hCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 60 VRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
+.-+||+||.... -.+...+.+++.||.+-+++.
T Consensus 93 lal~PDLIi~~~~-----~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 93 ITLQPDVVFITYV-----DRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HHHCCSEEEEESC-----CHHHHHHHHHHHTSCEEEECC
T ss_pred hcCCCCEEEEeCC-----ccchHHHHHHhcCCcEEEEec
Confidence 3445999987542 134566778889999998864
No 62
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=33.64 E-value=41 Score=22.86 Aligned_cols=49 Identities=14% Similarity=0.294 Sum_probs=34.4
Q ss_pred CCChhhhhc-hhhhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 48 EITPNCLSI-FQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 48 ~i~~~~l~~-l~~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.++.+.++. .+.+...-.+.++|.|... .+...+...|...|+.+...+
T Consensus 23 ~l~~~~l~~~~~~i~~a~~I~i~G~G~S~-~~a~~~~~~l~~~g~~~~~~~ 72 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRADHVIVVGMGFSA-AVAVFLGHGLNSLGIRTTVLT 72 (187)
T ss_dssp TCCHHHHHHHHHHHHHCSEEEEECCGGGH-HHHHHHHHHHHHTTCCEEEEC
T ss_pred hCCHHHHHHHHHHHHhCCEEEEEecCchH-HHHHHHHHHHHhcCCCEEEec
Confidence 345555542 1333444689999999863 466777888889999999998
No 63
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=33.40 E-value=31 Score=28.71 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=29.5
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAA 102 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAc 102 (126)
+++- ||-|-.... +|++.+.++++||.+|+.+|.+-.
T Consensus 352 ga~R--IgHGv~l~~-dp~l~~~l~~~~I~levCP~SN~~ 388 (508)
T 3lgd_A 352 NTTR--IGHGFALSK-HPAVRTYSWKKDIPIEVCPISNQV 388 (508)
T ss_dssp TCSS--EEECTTGGG-CHHHHHHHHHTTCCEEECHHHHHH
T ss_pred CCce--eeeeEecCc-cHHHHHHHHhcCCeEEECcchHHH
Confidence 4664 577777543 689999999999999999988753
No 64
>1r61_A Metal-dependent hydrolase; zinc-dependent hydrolase, structural genomics, cyclase, PSI, protein structure initiative; 2.50A {Geobacillus stearothermophilus} SCOP: c.8.8.1 PDB: 3krv_A
Probab=32.93 E-value=30 Score=24.95 Aligned_cols=50 Identities=10% Similarity=0.199 Sum_probs=36.4
Q ss_pred CCChhhhhchhhhCCCCcEEEEeecCC--------CCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 48 EITPNCLSIFQLVRPIPEILILGCGRY--------IEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 48 ~i~~~~l~~l~~l~~~pevliiGTG~~--------~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
.++.++++..+ +. +-|+|+|=||-. .--++++..++|.++|+..--.||.
T Consensus 88 ~It~~dl~~~~-i~-~gd~vlirTg~~~~~~y~~~~pgls~eaa~~L~~~~v~~vG~D~~ 145 (207)
T 1r61_A 88 RITKDDIAHLD-IQ-EGDFVLFKTKNSFEDAFHFEFIFVAEDAARYLADKQIRGVGIDAL 145 (207)
T ss_dssp EECHHHHTTSC-CC-TTCEEEEECGGGGCCSCCTTCCEECHHHHHHHHHHTCSEEECSSS
T ss_pred ccCHHHHHhcc-CC-CCcEEEEECCCCCchhhcCCCcccCHHHHHHHHHCCCCEEEEcCC
Confidence 58888877532 22 348999999932 1236899999999999988777664
No 65
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=32.84 E-value=9.8 Score=32.63 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=27.1
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
.+|+.||++|... ...-+..+.|++.||.+++.+.
T Consensus 549 g~dvtiia~G~~v-~~al~Aa~~L~~~Gi~~~Vi~~ 583 (663)
T 3kom_A 549 DAKLTIVATGSEV-ELAVKVANEFEKKGIKLNVASI 583 (663)
T ss_dssp TCSCEEEECTTHH-HHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEEecHHH-HHHHHHHHHHHhcCCCeEEEEc
Confidence 6899999999863 2334556788999999998753
No 66
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=32.68 E-value=31 Score=23.73 Aligned_cols=37 Identities=19% Similarity=0.136 Sum_probs=28.4
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHc-CCeEEEeChHH
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRST-GMKLEAIDSRN 100 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~-GI~vE~m~T~a 100 (126)
.+++|.++|-||.. -| -.+.+.++++ |..|+++..+.
T Consensus 106 a~~~d~~vLvSgD~-DF--~plv~~lr~~~G~~V~v~g~~~ 143 (165)
T 2qip_A 106 APDVDRVILVSGDG-DF--SLLVERIQQRYNKKVTVYGVPR 143 (165)
T ss_dssp GGGCSEEEEECCCG-GG--HHHHHHHHHHHCCEEEEEECGG
T ss_pred hccCCEEEEEECCh-hH--HHHHHHHHHHcCcEEEEEeCCC
Confidence 47899999999988 11 2456778885 99999997553
No 67
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=31.84 E-value=58 Score=20.34 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=29.4
Q ss_pred CCcEEEEeecCC---CCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 63 IPEILILGCGRY---IEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 63 ~pevliiGTG~~---~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
...++|+.+|.. .-.....+++.|.++|+.++..+..
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~ 53 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDIL 53 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESS
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECC
Confidence 346999988764 3467789999999999999988653
No 68
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=30.55 E-value=9.8 Score=32.23 Aligned_cols=34 Identities=9% Similarity=0.318 Sum_probs=25.7
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++|++||++|... ...-+..+.|++.||.+++.+
T Consensus 498 d~dv~iva~G~~v-~~al~Aa~~L~~~Gi~v~Vid 531 (616)
T 3mos_A 498 DDQVTVIGAGVTL-HEALAAAELLKKEKINIRVLD 531 (616)
T ss_dssp SEEEEEECCTHHH-HHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEEEeCHHH-HHHHHHHHHHHhcCCCEEEEE
Confidence 3669999999653 234456678889999999984
No 69
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=30.45 E-value=1.4e+02 Score=23.34 Aligned_cols=76 Identities=21% Similarity=0.208 Sum_probs=40.4
Q ss_pred cCCcEEEcCEEEeecEEEeCCccccCCCCCC----CCCChhhhhchhhhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCC
Q 033161 16 ASKGFTVNGVQYEGSLLCIGNLLLSWTPKKF----SEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGM 91 (126)
Q Consensus 16 ~~g~~~I~g~~y~g~vi~~~~~v~~W~~~~~----~~i~~~~l~~l~~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI 91 (126)
+...+.++|..+..+-++.-.+..+..+... .-++.+++..+... .+-.++|||.|.. .-++...|++.|.
T Consensus 119 ~~~~v~v~g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~l~~~-~~~~vvViGgG~~----g~e~A~~l~~~g~ 193 (464)
T 2eq6_A 119 GPKEVEVGGERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEG-LPKRLLVIGGGAV----GLELGQVYRRLGA 193 (464)
T ss_dssp ETTEEEETTEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTCGGGC-CCSEEEEECCSHH----HHHHHHHHHHTTC
T ss_pred cCCEEEEccEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHhhhhh-cCCEEEEECCCHH----HHHHHHHHHHCCC
Confidence 4456777777787776655444333222111 12344443322210 2347899998853 2355666677777
Q ss_pred eEEEe
Q 033161 92 KLEAI 96 (126)
Q Consensus 92 ~vE~m 96 (126)
.|.+.
T Consensus 194 ~Vtlv 198 (464)
T 2eq6_A 194 EVTLI 198 (464)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 76665
No 70
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.89 E-value=46 Score=21.40 Aligned_cols=37 Identities=19% Similarity=0.313 Sum_probs=25.4
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh-HHHHHH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS-RNAAST 104 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T-~aAcrT 104 (126)
..++|+|.|. .-..+.+.|.++|..|-+.+. ++.++.
T Consensus 7 ~~v~I~G~G~----iG~~la~~L~~~g~~V~~id~~~~~~~~ 44 (141)
T 3llv_A 7 YEYIVIGSEA----AGVGLVRELTAAGKKVLAVDKSKEKIEL 44 (141)
T ss_dssp CSEEEECCSH----HHHHHHHHHHHTTCCEEEEESCHHHHHH
T ss_pred CEEEEECCCH----HHHHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 4688888876 455777888888888877754 333433
No 71
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=29.59 E-value=21 Score=24.88 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=35.6
Q ss_pred CChhhhhc-hhhhCCCC-cEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHH
Q 033161 49 ITPNCLSI-FQLVRPIP-EILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAA 102 (126)
Q Consensus 49 i~~~~l~~-l~~l~~~p-evliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAc 102 (126)
++.+.++. .+.+.... .+.++|+|... .+...+...|.+.|+.+...+.....
T Consensus 29 l~~~~i~~~~~~i~~a~~~I~i~G~G~S~-~~A~~~~~~l~~~g~~~~~~~~~~~~ 83 (201)
T 3fxa_A 29 TSEEALVKTVEKIAECTGKIVVAGCGTSG-VAAKKLVHSFNCIERPAVFLTPSDAV 83 (201)
T ss_dssp SCHHHHHHHHHHHHHCSSCEEEECCTHHH-HHHHHHHHHHHHTTCCEEECCHHHHT
T ss_pred cCHHHHHHHHHHHHhcCCcEEEEEecHHH-HHHHHHHHHHHhcCCcEEEeCchHHH
Confidence 44444542 23344344 79999999873 35667777888899999998765543
No 72
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=29.57 E-value=24 Score=21.54 Aligned_cols=29 Identities=17% Similarity=0.489 Sum_probs=18.7
Q ss_pred EEEeecCC----CCCCCHHHHHHHHHcCCeEEE
Q 033161 67 LILGCGRY----IEPVNPELRQFIRSTGMKLEA 95 (126)
Q Consensus 67 liiGTG~~----~~~~~~~~~~~l~~~GI~vE~ 95 (126)
||-|.|.. ...+.+.+.++|++.++.++.
T Consensus 39 II~GkG~hS~~g~~~Lk~~V~~~L~~~~~~~~e 71 (82)
T 3fau_A 39 VITGRGNHSQGGVARIKPAVIKYLISHSFRFSE 71 (82)
T ss_dssp EECCC---------CHHHHHHHHHHHTTCCEEE
T ss_pred EEECCCCCCCCCcchHHHHHHHHHHhCCCceee
Confidence 44566652 234778999999999998854
No 73
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=29.18 E-value=30 Score=27.35 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=25.4
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
...|++|||+|-.-. ....+|.++|..|.++.
T Consensus 10 ~~~dvvVIGaG~~GL----~aA~~La~~G~~V~vlE 41 (453)
T 2bcg_G 10 TDYDVIVLGTGITEC----ILSGLLSVDGKKVLHID 41 (453)
T ss_dssp CBCSEEEECCSHHHH----HHHHHHHHTTCCEEEEC
T ss_pred ccCCEEEECcCHHHH----HHHHHHHHCCCeEEEEe
Confidence 357999999998632 55667889999999984
No 74
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=29.09 E-value=59 Score=23.09 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=30.7
Q ss_pred hCCCCcEEEEeecCCCC-CCCHHHHHHHHHcCCeEEEeCh
Q 033161 60 VRPIPEILILGCGRYIE-PVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 60 l~~~pevliiGTG~~~~-~~~~~~~~~l~~~GI~vE~m~T 98 (126)
+...=+++++-.|.... -....+.+.++++|+.+|+.+-
T Consensus 91 ~~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPG 130 (232)
T 2qbu_A 91 LEDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPG 130 (232)
T ss_dssp HHTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECC
T ss_pred HHCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCC
Confidence 33445799999999955 4557888999999999999953
No 75
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=28.60 E-value=78 Score=21.03 Aligned_cols=52 Identities=12% Similarity=0.190 Sum_probs=33.5
Q ss_pred hCCCCcEEEEeecCC-CCC----CCH-H-------HHHHHHHcCCeEEEeCh--------------HHHHHHHHHhhhc
Q 033161 60 VRPIPEILILGCGRY-IEP----VNP-E-------LRQFIRSTGMKLEAIDS--------------RNAASTYNILNEE 111 (126)
Q Consensus 60 l~~~pevliiGTG~~-~~~----~~~-~-------~~~~l~~~GI~vE~m~T--------------~aAcrTyN~L~sE 111 (126)
...+||+|+|..|.+ ... .++ + +.+.+++.|..+-++.. ....+.||..+.+
T Consensus 71 ~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~~~~n~~l~~ 149 (204)
T 3p94_A 71 INLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKE 149 (204)
T ss_dssp GGGCEEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCCHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccHHHHHHHHHHHHHH
Confidence 345799999998887 322 232 2 34456778988888842 2366777776644
No 76
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=28.54 E-value=1.7e+02 Score=22.19 Aligned_cols=51 Identities=12% Similarity=0.100 Sum_probs=34.1
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe-----ChHHHHHHHHHhhhccce
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI-----DSRNAASTYNILNEEGRI 114 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m-----~T~aAcrTyN~L~sEgR~ 114 (126)
.+++|+|+|.|.. ..+.++...+-++|+.|-+- +..+|-+-.......|+.
T Consensus 81 ~~~iD~V~i~tp~---~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~ 136 (383)
T 3oqb_A 81 DKNDTMFFDAATT---QARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVK 136 (383)
T ss_dssp CSSCCEEEECSCS---SSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEECCCc---hHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCe
Confidence 4679999999987 45677777777889998873 444454444443333443
No 77
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=28.49 E-value=69 Score=23.74 Aligned_cols=37 Identities=11% Similarity=0.022 Sum_probs=29.9
Q ss_pred CCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeC
Q 033161 61 RPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~ 97 (126)
...-+++++-.|....+ ...++.+.+.+.||.+|+.+
T Consensus 74 ~~G~~Va~L~~GDP~iyg~~~~l~~~l~~~gi~veviP 111 (264)
T 3ndc_A 74 AAGQDVARLHSGDLSIWSAMGEQLRRLRALNIPYDVTP 111 (264)
T ss_dssp HHTCCEEEEESBCTTSSCSHHHHHHHHHHTTCCEEEEC
T ss_pred HCCCeEEEEeCCCCccccHHHHHHHHHHhCCCCEEEeC
Confidence 34567999999998654 45778899999999999995
No 78
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=28.37 E-value=30 Score=22.20 Aligned_cols=38 Identities=8% Similarity=0.166 Sum_probs=29.6
Q ss_pred CCCcEEEEeecCCCC---CCCHHHHHHHHHcCCeEEEeChH
Q 033161 62 PIPEILILGCGRYIE---PVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 62 ~~pevliiGTG~~~~---~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
....++|+..|.... .....+++.|.++|+.++..+..
T Consensus 14 ~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~ 54 (111)
T 3zyw_A 14 HAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIF 54 (111)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGG
T ss_pred hcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECc
Confidence 356788998877643 56688999999999999988543
No 79
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=28.21 E-value=52 Score=22.02 Aligned_cols=51 Identities=10% Similarity=0.202 Sum_probs=34.8
Q ss_pred CCCCChhhhhchhhhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 46 FSEITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 46 ~~~i~~~~l~~l~~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
.+..+.+.++. ++...-.+.|+|.+.+.-.+...+.++|.+.|..+--.+.
T Consensus 7 ~~~m~~~~l~~--ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp 57 (144)
T 2d59_A 7 IDGLTDEDIRE--ILTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP 57 (144)
T ss_dssp SSCCCHHHHHH--HHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred cCCCCHHHHHH--HHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECC
Confidence 33456666774 3432356999999987666777888899999886544443
No 80
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=27.56 E-value=24 Score=22.72 Aligned_cols=38 Identities=18% Similarity=0.371 Sum_probs=25.6
Q ss_pred EEEEeecCCCCCCCHHHHHHHHHcCCeE--EEeChHHHHH
Q 033161 66 ILILGCGRYIEPVNPELRQFIRSTGMKL--EAIDSRNAAS 103 (126)
Q Consensus 66 vliiGTG~~~~~~~~~~~~~l~~~GI~v--E~m~T~aAcr 103 (126)
+++=|+|...-.+-..+++.+.+.|+.+ +..+...+-.
T Consensus 8 lvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~~~ 47 (109)
T 2l2q_A 8 LLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRLSE 47 (109)
T ss_dssp EEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHHH
T ss_pred EEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHh
Confidence 3444666665577789999999999864 4455555443
No 81
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=27.45 E-value=1.2e+02 Score=19.34 Aligned_cols=40 Identities=10% Similarity=0.167 Sum_probs=32.1
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe---ChHHHHHHHH
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI---DSRNAASTYN 106 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m---~T~aAcrTyN 106 (126)
..++++||.|- ..+...+.|.++||.+-.. +..+|...|-
T Consensus 63 ~~gv~~vi~~~------iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~ 105 (124)
T 1eo1_A 63 NNGVKAVIASS------PGPNAFEVLNELGIKIYRATGTSVEENLKLFT 105 (124)
T ss_dssp HTTCCEEEECC------SSHHHHHHHHHHTCEEEECCSCCHHHHHHHHH
T ss_pred HCCCCEEEECC------cCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHH
Confidence 46799999884 5788999999999998773 5577777774
No 82
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=27.15 E-value=37 Score=26.08 Aligned_cols=59 Identities=3% Similarity=-0.110 Sum_probs=40.4
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeecCccC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLPYGVS 125 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~~~~ 125 (126)
+||++|-=|-.. ...+..+++.++|+.+-+.+|+-.-..+..|..-.++ .+.|+.+++|
T Consensus 88 ~aDVvIDFT~p~---a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~-~~~~~a~N~S 146 (288)
T 3ijp_A 88 NTEGILDFSQPQ---ASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKY-TTIVKSGNMS 146 (288)
T ss_dssp SCSEEEECSCHH---HHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTT-SEEEECSCCC
T ss_pred CCCEEEEcCCHH---HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCc-CCEEEECCCc
Confidence 799998666211 1133456778899999999887655566666665566 4468888876
No 83
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=27.01 E-value=20 Score=26.07 Aligned_cols=43 Identities=9% Similarity=-0.063 Sum_probs=34.5
Q ss_pred CcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeChHHHHHHHH
Q 033161 64 PEILILGCGRYIEP-VNPELRQFIRSTGMKLEAIDSRNAASTYN 106 (126)
Q Consensus 64 pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~T~aAcrTyN 106 (126)
-.+++-=||..... -..++.+.|++.|+.|.+.=|++|.+...
T Consensus 8 k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 8 KHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp CEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred CEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 35667778876555 78999999999999999999999987543
No 84
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=26.83 E-value=25 Score=28.04 Aligned_cols=40 Identities=20% Similarity=0.295 Sum_probs=33.3
Q ss_pred hhhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHH
Q 033161 58 QLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNA 101 (126)
Q Consensus 58 ~~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aA 101 (126)
+.+.|+|.++|+|-|. +...+.+.++..|..|.+.|...+
T Consensus 199 e~~~P~~rL~IfGAGh----va~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 199 SSYAPRPRMLVFGAID----FAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp EEECCCCEEEEECCST----HHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEcCCCCEEEEECCCH----HHHHHHHHHHhCCCEEEEECCchh
Confidence 4456899999999997 456888899999999999987654
No 85
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=26.56 E-value=17 Score=26.56 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=35.1
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHH-cCCeEEEeChHHHHHHHHHh
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRS-TGMKLEAIDSRNAASTYNIL 108 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~-~GI~vE~m~T~aAcrTyN~L 108 (126)
+.-+++.-||.....-..++.+.|++ .|+.|.+.-|++|.+....+
T Consensus 19 ~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred CCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 35678888888855556899999998 89999999999998766543
No 86
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=26.37 E-value=75 Score=23.54 Aligned_cols=32 Identities=13% Similarity=0.286 Sum_probs=23.0
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEE
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEA 95 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~ 95 (126)
++.-+||+||...+ .+++..+.|++.|..+-+
T Consensus 92 I~~l~PDLIi~~~~-----~~~~~~~~L~~~gp~v~~ 123 (311)
T 2wi8_A 92 ILEMKPDVILASTK-----FPEKTLQKISTAGTTIPV 123 (311)
T ss_dssp HHHHCCSEEEEETT-----SCHHHHHHHHTTSCEEEE
T ss_pred HHhCCCCEEEEcCc-----cCHHHHHHHHhhCCEEEe
Confidence 33446999886532 367899999999976655
No 87
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=26.21 E-value=53 Score=21.01 Aligned_cols=18 Identities=11% Similarity=0.290 Sum_probs=15.0
Q ss_pred HHHHHHHHHcCCeEEEeC
Q 033161 80 PELRQFIRSTGMKLEAID 97 (126)
Q Consensus 80 ~~~~~~l~~~GI~vE~m~ 97 (126)
.+..++|+++|+.+|++.
T Consensus 79 ~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 79 QAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEee
Confidence 466889999999999863
No 88
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=25.93 E-value=23 Score=25.52 Aligned_cols=46 Identities=7% Similarity=0.057 Sum_probs=31.2
Q ss_pred CCCC-hhhhhchhhhCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEE
Q 033161 47 SEIT-PNCLSIFQLVRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLE 94 (126)
Q Consensus 47 ~~i~-~~~l~~l~~l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE 94 (126)
..++ .+++.. ..+.+.|-+++|++-.... ...+..+++++.|+.+.
T Consensus 202 GGI~~~~d~~~--~~~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 202 GGAGKMEHFLE--AFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVR 249 (253)
T ss_dssp SCCCSHHHHHH--HHHTTCSEEEESHHHHTTCSCHHHHHHHHHHTTCCCC
T ss_pred CCCCCHHHHHH--HHHcCChHHHHHHHHHcCCCCHHHHHHHHHHcCCccc
Confidence 4555 477774 3455688889988766443 45677888888887654
No 89
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=25.79 E-value=95 Score=19.85 Aligned_cols=40 Identities=8% Similarity=0.108 Sum_probs=32.1
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe---ChHHHHHHHH
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI---DSRNAASTYN 106 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m---~T~aAcrTyN 106 (126)
+.++|+||.|. ..+..++.|+++||.+-.. +..+|.+.|-
T Consensus 61 ~~gv~~vi~~~------iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~ 103 (121)
T 2yx6_A 61 DHGAKIVLTYG------IGRRAIEYFNSLGISVVTGVYGRISDVIKAFI 103 (121)
T ss_dssp HTTCCEEECSB------CCHHHHHHHHHTTCEEECSBCSBHHHHHHHHH
T ss_pred HcCCCEEEECC------CCHhHHHHHHHCCCEEEECCCCCHHHHHHHHH
Confidence 46799999883 5789999999999998764 5577887773
No 90
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=25.61 E-value=1.3e+02 Score=22.34 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=30.6
Q ss_pred hCCCCcEEEEeecCCCC-CCCHHHHHHHHHcCCeEEEeC
Q 033161 60 VRPIPEILILGCGRYIE-PVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 60 l~~~pevliiGTG~~~~-~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+...=+++++-.|.... -...++.+.+.+.||.+|+.+
T Consensus 90 ~~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviP 128 (285)
T 1cbf_A 90 MREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVP 128 (285)
T ss_dssp HTTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEEC
T ss_pred HHCCCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEEC
Confidence 33455799999999954 466888899999999999995
No 91
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=25.48 E-value=25 Score=28.03 Aligned_cols=41 Identities=24% Similarity=0.412 Sum_probs=34.2
Q ss_pred hhhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHH
Q 033161 58 QLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAA 102 (126)
Q Consensus 58 ~~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAc 102 (126)
+.+.|+|.++|+|-|. +...+.+..+..|..|.+.|..++-
T Consensus 194 e~~~p~~~L~I~GaGh----va~aLa~la~~lgf~V~v~D~R~~~ 234 (362)
T 3on5_A 194 HIYSPKERLIIFGAGP----DVPPLVTFASNVGFYTVVTDWRPNQ 234 (362)
T ss_dssp EEECCCEEEEEECCST----THHHHHHHHHHHTEEEEEEESCGGG
T ss_pred EecCCCCEEEEECCCH----HHHHHHHHHHHCCCeEEEECCCccc
Confidence 4567899999999997 4568888999999999999887653
No 92
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=25.47 E-value=1.2e+02 Score=19.73 Aligned_cols=49 Identities=6% Similarity=-0.011 Sum_probs=31.5
Q ss_pred CCCcEEEEeecCC-C-CCCCH--------HHHHHHHHcCCeEEEeCh-------HHHHHHHHHhhh
Q 033161 62 PIPEILILGCGRY-I-EPVNP--------ELRQFIRSTGMKLEAIDS-------RNAASTYNILNE 110 (126)
Q Consensus 62 ~~pevliiGTG~~-~-~~~~~--------~~~~~l~~~GI~vE~m~T-------~aAcrTyN~L~s 110 (126)
.+||+|+|-.|.+ . ...++ ++.+.++++|..+-++.+ ....+.||..+.
T Consensus 65 ~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~~~p~~~~~~~~~~~~~~~~ 130 (185)
T 3hp4_A 65 YEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEIYIPPNYGPRYSKMFTSSFT 130 (185)
T ss_dssp HCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHHHHHHH
Confidence 3799999988876 2 33332 345577788888887742 334456666543
No 93
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=25.46 E-value=40 Score=23.04 Aligned_cols=35 Identities=11% Similarity=0.148 Sum_probs=29.3
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+.++.||=-+..+.....++.+.|++.|+.+|+..
T Consensus 8 P~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~ 42 (130)
T 1v95_A 8 PVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIF 42 (130)
T ss_dssp CCTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEec
Confidence 45677777777788888999999999999999854
No 94
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.42 E-value=1.5e+02 Score=19.42 Aligned_cols=50 Identities=16% Similarity=0.070 Sum_probs=36.6
Q ss_pred hhC-CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe--ChHHHHHHHHHhhhc
Q 033161 59 LVR-PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI--DSRNAASTYNILNEE 111 (126)
Q Consensus 59 ~l~-~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m--~T~aAcrTyN~L~sE 111 (126)
.+. +++--|||-.|. .+++++.+..+++||.+-.- +|-.+|+.-+....+
T Consensus 69 a~~~~~~~~iIlt~g~---~~~~~i~~~A~~~~ipvl~t~~~T~~~~~~l~~~l~~ 121 (139)
T 2ioj_A 69 ALEMPNVRCLILTGNL---EPVQLVLTKAEERGVPVILTGHDTLTAVSRLESVFGR 121 (139)
T ss_dssp HTTCTTEEEEEEETTC---CCCHHHHHHHHHHTCCEEECSSCHHHHHHHHHTTCST
T ss_pred HHhCCCCcEEEEcCCC---CCCHHHHHHHHHCCCeEEEECCCHHHHHHHHHHHhcc
Confidence 444 556667776665 48999999999999997665 788888876665544
No 95
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=25.19 E-value=39 Score=21.89 Aligned_cols=30 Identities=20% Similarity=0.269 Sum_probs=22.6
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEE
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEA 95 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~ 95 (126)
++..++|+|.|.. .+++.+.+++.|+.+.+
T Consensus 31 ~~~~l~i~G~g~~----~~~~~~~~~~~~~~v~~ 60 (166)
T 3qhp_A 31 QDIVLLLKGKGPD----EKKIKLLAQKLGVKAEF 60 (166)
T ss_dssp GGEEEEEECCSTT----HHHHHHHHHHHTCEEEC
T ss_pred CCeEEEEEeCCcc----HHHHHHHHHHcCCeEEE
Confidence 4567899998764 36778888888877666
No 96
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=25.16 E-value=37 Score=25.16 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=24.4
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+.||+|||-|..- -.+...|.++|+.|-+..
T Consensus 4 ~yDViIVGaGpaG----l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 4 TYDVLVVGGGPGG----STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEEEEECCSHHH----HHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEECcCHHH----HHHHHHHHHCCCcEEEEe
Confidence 3699999999763 256678889999998885
No 97
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=25.02 E-value=68 Score=23.47 Aligned_cols=39 Identities=8% Similarity=0.073 Sum_probs=30.8
Q ss_pred hCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeCh
Q 033161 60 VRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~T 98 (126)
+...-+++++-.|....+ ...++.+.+++.|+.+|+.+-
T Consensus 74 ~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPG 113 (253)
T 4e16_A 74 IENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPG 113 (253)
T ss_dssp HHTTCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECC
T ss_pred HHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECC
Confidence 345568999999988554 557788899999999999953
No 98
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=24.71 E-value=98 Score=22.17 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=30.5
Q ss_pred hCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeChH
Q 033161 60 VRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
+...=+++++-.|....+ ....+.+.++++|+.+|+.+--
T Consensus 72 ~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGi 112 (239)
T 1va0_A 72 ARAHPFVVRLKGGDPMVFGRGGEEVLFLLRHGVPVEVVPGV 112 (239)
T ss_dssp HHTSSEEEEEESBCTTSSSSHHHHHHHHHHTTCCEEEECCC
T ss_pred HHCCCcEEEEeCCCCccccCHHHHHHHHHHCCCcEEEECCc
Confidence 334568999988888553 5567788899999999999533
No 99
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=24.34 E-value=93 Score=22.23 Aligned_cols=49 Identities=18% Similarity=0.134 Sum_probs=34.9
Q ss_pred hCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeC----hHHHHHHHHHh
Q 033161 60 VRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAID----SRNAASTYNIL 108 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~----T~aAcrTyN~L 108 (126)
+...=+++++-.|....+ ....+.+.++++|+.+|+.+ -.+||....+=
T Consensus 75 ~~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiSs~~aa~a~~g~p 128 (235)
T 1ve2_A 75 AREGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLP 128 (235)
T ss_dssp HHTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCCTTHHHHHHTTCC
T ss_pred HHcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHhHHHHHHHHcCCC
Confidence 344568999988888553 55677888999999999994 34455555443
No 100
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=24.19 E-value=24 Score=26.31 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=26.8
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNA 101 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aA 101 (126)
.-++|.||||.+...+-+.+.+.+++-+..+.+.+|...
T Consensus 18 dg~vIgLGsGST~~~~i~~L~~~~~~~~~~i~~VttS~~ 56 (225)
T 3l7o_A 18 DGMIVGLGTGSTAYYFVEEVGRRVQEEGLQVIGVTTSSR 56 (225)
T ss_dssp TTCEEEECCSTTHHHHHHHHHHHHHHHCCCCEEEESSHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHhhhhcCCCEEEEcCCHH
Confidence 357999999999776666666666554555656655543
No 101
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=24.04 E-value=36 Score=23.26 Aligned_cols=32 Identities=0% Similarity=0.014 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHcCCeEEEe----------ChHHHHHHHHH
Q 033161 76 EPVNPELRQFIRSTGMKLEAI----------DSRNAASTYNI 107 (126)
Q Consensus 76 ~~~~~~~~~~l~~~GI~vE~m----------~T~aAcrTyN~ 107 (126)
+.....+.++|.++||.+++. .+.++|+.+++
T Consensus 5 ~~~~t~~~~~L~~~~i~y~~~~~~h~~~~~~~~~e~a~~l~~ 46 (166)
T 2dxa_A 5 SSGMTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGL 46 (166)
T ss_dssp ---CCHHHHHHHHTTCCCEEEECCCCTTSCCSSCHHHHHHTC
T ss_pred CCchhHHHHHHHHCCCCcEEEEEecCCcccchHHHHHHHcCC
Confidence 455667899999999999982 36677877764
No 102
>1r02_A Orexin-A, hypocretin-1; turn, helix-loop-helix, neuropeptide; NMR {Synthetic} SCOP: j.6.1.1 PDB: 1wso_A*
Probab=24.02 E-value=5.3 Score=21.16 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=13.6
Q ss_pred HHHHHHHHhhhccceeEE
Q 033161 100 NAASTYNILNEEGRIVAA 117 (126)
Q Consensus 100 aAcrTyN~L~sEgR~Vaa 117 (126)
-+||.|-+|...|+..++
T Consensus 12 ~sCrly~lL~r~G~aAaG 29 (33)
T 1r02_A 12 CSCRLYELLHGAGNHAAG 29 (33)
T ss_dssp STHHHHHHHHTSCHHHHH
T ss_pred CChhHHHHHHccCcchhe
Confidence 479999999988874443
No 103
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=23.93 E-value=1.3e+02 Score=18.50 Aligned_cols=33 Identities=9% Similarity=0.098 Sum_probs=25.8
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
+.+.|.++ ..-.....++++|.++||.++..+.
T Consensus 4 a~I~vYs~--~~Cp~C~~aK~~L~~~gi~y~~idi 36 (92)
T 2lqo_A 4 AALTIYTT--SWCGYCLRLKTALTANRIAYDEVDI 36 (92)
T ss_dssp SCEEEEEC--TTCSSHHHHHHHHHHTTCCCEEEET
T ss_pred CcEEEEcC--CCCHhHHHHHHHHHhcCCceEEEEc
Confidence 45677765 4456778999999999999998754
No 104
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=23.90 E-value=91 Score=23.19 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=29.5
Q ss_pred CCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeC
Q 033161 61 RPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~ 97 (126)
...-+++++-.|....+ ...++.+.++++|+.+|+.+
T Consensus 90 ~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviP 127 (280)
T 1s4d_A 90 RAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVP 127 (280)
T ss_dssp HTTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEEC
T ss_pred hCCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEc
Confidence 34457999988999654 55678899999999999984
No 105
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=23.84 E-value=29 Score=25.01 Aligned_cols=45 Identities=9% Similarity=0.106 Sum_probs=31.6
Q ss_pred CCCC-hhhhhchhhhCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeE
Q 033161 47 SEIT-PNCLSIFQLVRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKL 93 (126)
Q Consensus 47 ~~i~-~~~l~~l~~l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~v 93 (126)
..++ .+++.. +.+.+.|-+++|++-.... ...++++++++.||.+
T Consensus 203 GGI~~~~d~~~--~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 203 GGAGRMEHFLE--AFQAGAEAALAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp SCCCSHHHHHH--HHHTTCSEEEESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred CCCCCHHHHHH--HHHCCCHHHHHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 4554 577774 3345688899998877543 5677788888888865
No 106
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=23.82 E-value=2e+02 Score=20.74 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=20.2
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.-.++|+|.|... -++...|.+.|..|.+..
T Consensus 159 ~~~v~VvG~G~~g----~e~A~~l~~~g~~V~lv~ 189 (333)
T 1vdc_A 159 NKPLAVIGGGDSA----MEEANFLTKYGSKVYIIH 189 (333)
T ss_dssp TSEEEEECCSHHH----HHHHHHHTTTSSEEEEEC
T ss_pred CCeEEEECCChHH----HHHHHHHHhcCCeEEEEe
Confidence 3469999988642 255556666677766653
No 107
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=23.82 E-value=22 Score=21.77 Aligned_cols=34 Identities=32% Similarity=0.381 Sum_probs=26.2
Q ss_pred HHHHHHcCCeEEEeChHHHHHHHHHhhhccceeEEEeecCccC
Q 033161 83 RQFIRSTGMKLEAIDSRNAASTYNILNEEGRIVAAALLPYGVS 125 (126)
Q Consensus 83 ~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR~VaaaLl~~~~~ 125 (126)
+..|.-+. -|..+|..-|+.| |+|.++=+|+.++
T Consensus 36 RDlleGKn-----WDl~AAL~D~eqL----rqvh~~nlp~~f~ 69 (73)
T 2l2d_A 36 RDLLEGKN-----WDLTAALSDYEQL----RQVHTANLPHVFN 69 (73)
T ss_dssp HHHHHHTT-----TCHHHHHHHHHHH----HHCCSSSSSCCCC
T ss_pred HHhhccCC-----ccHhHHhhhHHHH----HHHHhcCCCCccc
Confidence 55666665 4789999999999 7888888877654
No 108
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=23.68 E-value=36 Score=26.94 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=24.3
Q ss_pred hhhchhhhCCCCcEEEEeecCCCCCCCHHHHHHHH---HcCCeE
Q 033161 53 CLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIR---STGMKL 93 (126)
Q Consensus 53 ~l~~l~~l~~~pevliiGTG~~~~~~~~~~~~~l~---~~GI~v 93 (126)
+++ +.++.+||++|+|+-...-.++++.++.+. ++|+.|
T Consensus 81 d~~--~al~~~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G~nV 122 (350)
T 2g0t_A 81 SVE--KAKEMGAEVLIIGVSNPGGYLEEQIATLVKKALSLGMDV 122 (350)
T ss_dssp SHH--HHHHTTCCEEEECCCSCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CHH--HHHhcCCCEEEEEecCCCCCCCHHHHHHHHHHHHcCCcE
Confidence 455 355567999999985544345544443333 588888
No 109
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.65 E-value=47 Score=21.92 Aligned_cols=33 Identities=27% Similarity=0.550 Sum_probs=24.8
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
++..++|+|.|.- -..+.+.|.+.|..|-+.+.
T Consensus 18 ~~~~v~IiG~G~i----G~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRL----GSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEECCCHH----HHHHHHHHHhCCCeEEEEEC
Confidence 4567999998864 34677788888988877754
No 110
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=23.63 E-value=25 Score=25.65 Aligned_cols=46 Identities=7% Similarity=0.042 Sum_probs=17.4
Q ss_pred CCCC-hhhhhchhhhCCCCcEEEEeecCCCC-CCCHHHHHHHHHcCCeEE
Q 033161 47 SEIT-PNCLSIFQLVRPIPEILILGCGRYIE-PVNPELRQFIRSTGMKLE 94 (126)
Q Consensus 47 ~~i~-~~~l~~l~~l~~~pevliiGTG~~~~-~~~~~~~~~l~~~GI~vE 94 (126)
..++ .+++.. +++...|-+++|+.-... ....+++++++++|+.+.
T Consensus 207 GGI~~~ed~~~--~~~~Gadgv~vgsal~~~~~~~~~~~~~l~~~g~~~~ 254 (266)
T 2w6r_A 207 GGAGKMEHFLE--AFLAGADAALAASVFHFREIDMRELKEYLKKHGVNVR 254 (266)
T ss_dssp SCCCSHHHHHH--HHHHTCSEEEESTTTC---------------------
T ss_pred CCCCCHHHHHH--HHHcCCHHHHccHHHHcCCCCHHHHHHHHHHCCCccc
Confidence 4454 477664 334468999999887743 466778888888888764
No 111
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=23.57 E-value=19 Score=32.09 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=26.1
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHc-CCeEEEeCh
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRST-GMKLEAIDS 98 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~-GI~vE~m~T 98 (126)
+|+.|+++|... ...-+..+.|++. ||.+++.+.
T Consensus 724 ~dVtLia~G~~v-~~al~AAe~L~~e~GI~a~Vvd~ 758 (886)
T 2qtc_A 724 GKVQLLGSGSIL-RHVREAAEILAKDYGVGSDVYSV 758 (886)
T ss_dssp EEEEEEECGGGH-HHHHHHHHHHHHHHCEEEEEEEC
T ss_pred CCEEEEeCcHHH-HHHHHHHHHHhhhhCCceEEEEC
Confidence 899999999865 3344556677777 999999853
No 112
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=23.34 E-value=73 Score=24.44 Aligned_cols=57 Identities=12% Similarity=0.139 Sum_probs=29.7
Q ss_pred EEEcCEEEeecEEEeCCccccCCCCCCCCCChhhhhchhhhCCCCcEEEEeecCCCC--CCCHHHHHHHH
Q 033161 20 FTVNGVQYEGSLLCIGNLLLSWTPKKFSEITPNCLSIFQLVRPIPEILILGCGRYIE--PVNPELRQFIR 87 (126)
Q Consensus 20 ~~I~g~~y~g~vi~~~~~v~~W~~~~~~~i~~~~l~~l~~l~~~pevliiGTG~~~~--~~~~~~~~~l~ 87 (126)
++|.|+.++.-+++.-+.. . +.+.++. .+...+.|++-+.+-..-. .-.+.+.+++.
T Consensus 4 l~i~~~~~~srl~~Gtgky---~-------~~~~~~~-ai~asg~eivtva~rR~~~~~~~~~~~~~~i~ 62 (268)
T 2htm_A 4 WKVGPVELKSRLILGSGKY---E-------DFGVMRE-AIAAAKAEVVTVSVRRVELKAPGHVGLLEALE 62 (268)
T ss_dssp EEETTEEECCSEEEECSSC---S-------CHHHHHH-HHHHTTCSEEEEEEEECC-------CHHHHTT
T ss_pred eEECCEEeecceEEecCCC---C-------CHHHHHH-HHHHhCCCEEEEEccccCCCCCCcccHHHHHh
Confidence 7788888888877754432 1 1122221 1234568888888643311 12355666665
No 113
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=23.30 E-value=23 Score=24.02 Aligned_cols=31 Identities=16% Similarity=0.416 Sum_probs=23.5
Q ss_pred CCCcEEEEeecCCCC---CCCHHHHHHHHHcCCe
Q 033161 62 PIPEILILGCGRYIE---PVNPELRQFIRSTGMK 92 (126)
Q Consensus 62 ~~pevliiGTG~~~~---~~~~~~~~~l~~~GI~ 92 (126)
+-.|+.||.||.+.+ -+..++.+.+++.|..
T Consensus 32 ~~~DyfVIatg~S~rqv~Aiad~v~~~lk~~g~~ 65 (125)
T 2o5a_A 32 LIADFFLICHGNSEKQVQAIAHELKKVAQEQGIE 65 (125)
T ss_dssp C--CEEEEEEESSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCEEEEEEcCCHHHHHHHHHHHHHHHHHcCCc
Confidence 346999999999943 4668889999998863
No 114
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=23.29 E-value=83 Score=23.60 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=29.1
Q ss_pred CCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeC
Q 033161 63 IPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 63 ~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~ 97 (126)
.=+++++-.|....+ ...++.+.++++|+.+|+.+
T Consensus 83 g~~Vv~L~~GDP~v~g~~~~l~~~l~~~gi~veviP 118 (294)
T 1wde_A 83 DAVVAVVTAGDPMVATTHSSLAAEALEAGVAVRYIP 118 (294)
T ss_dssp CCEEEEEESBCTTSSSSHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEeCCCCccccCHHHHHHHHHHCCCCEEEEC
Confidence 457999999999654 55778899999999999994
No 115
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=23.19 E-value=2.4e+02 Score=21.23 Aligned_cols=53 Identities=13% Similarity=0.158 Sum_probs=33.3
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe-----ChHHHHHHHHHhhhccceeE
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI-----DSRNAASTYNILNEEGRIVA 116 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m-----~T~aAcrTyN~L~sEgR~Va 116 (126)
++++|+|+|.|... .+.++...+.++|..|-+- +..+|-+-......-|+.+.
T Consensus 63 ~~~vD~V~i~tp~~---~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~ 120 (358)
T 3gdo_A 63 DPAIELVIVTTPSG---LHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLS 120 (358)
T ss_dssp CTTCCEEEECSCTT---THHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCCEEEEcCCcH---HHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 36899999999664 4567777777889888773 34444444433333344443
No 116
>1p6o_A Cytosine deaminase; hydrolase, dimer, inhibitor bound; 1.14A {Saccharomyces cerevisiae} SCOP: c.97.1.2 PDB: 1ox7_A 1rb7_A 1ysd_A 1ysb_A 2o3k_A 1uaq_A
Probab=23.16 E-value=91 Score=21.53 Aligned_cols=50 Identities=8% Similarity=0.129 Sum_probs=31.2
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhhhccc
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNILNEEGR 113 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~sEgR 113 (126)
..++.-|++|+-.... . ...+.|+++||.|+.+.-++|...+-.-..+.|
T Consensus 103 ~agi~rVv~g~~~~~~--g-~~~~~l~~~gi~v~~~~~~e~~~l~~~f~~~~r 152 (161)
T 1p6o_A 103 MYGIPRCVVGENVNFK--S-KGEKYLQTRGHEVVVVDDERCKKIMKQFIDERP 152 (161)
T ss_dssp HHTCCEEEEEESSSCC--C-THHHHHHHTTCEEEECCCHHHHHHHHHHHHHCH
T ss_pred HhCCCEEEEEecCCCC--c-cHHHHHHhcCCEEEEecHHHHHHHHHHHHHhCh
Confidence 3467889998755422 1 356778999999998665555444433333333
No 117
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=23.14 E-value=28 Score=23.83 Aligned_cols=31 Identities=10% Similarity=0.259 Sum_probs=24.8
Q ss_pred CCCcEEEEeecCCCC---CCCHHHHHHHHHcCCe
Q 033161 62 PIPEILILGCGRYIE---PVNPELRQFIRSTGMK 92 (126)
Q Consensus 62 ~~pevliiGTG~~~~---~~~~~~~~~l~~~GI~ 92 (126)
.-.|+.||.||.+.+ -+..++.+.+++.|..
T Consensus 32 ~~~DyfVIaTg~S~rqv~Aiad~v~~~lk~~g~~ 65 (130)
T 2id1_A 32 SLFQRMIVATGDSNRQVKALANSVQVKLKEAGVD 65 (130)
T ss_dssp SSCSEEEEEECSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCEEEEEEcCCHHHHHHHHHHHHHHHHHcCCc
Confidence 447999999999943 4678889999988863
No 118
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=23.12 E-value=1.1e+02 Score=22.90 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=29.9
Q ss_pred hCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeC
Q 033161 60 VRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~ 97 (126)
+...=+++++-.|....+ ...++.+.+++.||.+|+.+
T Consensus 99 ~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIP 137 (294)
T 2ybo_A 99 ARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVP 137 (294)
T ss_dssp HHTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEEC
T ss_pred HHCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEEC
Confidence 334567999988888654 45678889999999999994
No 119
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=23.04 E-value=1e+02 Score=19.67 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=31.0
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEe----ChHHHHHHHH
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAI----DSRNAASTYN 106 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m----~T~aAcrTyN 106 (126)
.+.|+||.|. ..+...+.|+++||.+-.. +..+|.+.|-
T Consensus 66 ~gv~~vi~~~------iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~ 108 (120)
T 2wfb_A 66 SGAGVLLTGY------VGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFL 108 (120)
T ss_dssp HTEEEEECSC------CCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHH
T ss_pred CCCCEEEECC------CCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHH
Confidence 5699999883 6788999999999998875 4467777763
No 120
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=22.72 E-value=69 Score=20.21 Aligned_cols=17 Identities=12% Similarity=0.258 Sum_probs=14.6
Q ss_pred HHHHHHHHHcCCeEEEe
Q 033161 80 PELRQFIRSTGMKLEAI 96 (126)
Q Consensus 80 ~~~~~~l~~~GI~vE~m 96 (126)
.+..++|+++|+.+|++
T Consensus 79 ~~ai~~L~~~~v~vEvl 95 (98)
T 3ced_A 79 GKFEKELIERQVKMEVL 95 (98)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEe
Confidence 46678999999999987
No 121
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=22.69 E-value=46 Score=26.30 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=28.4
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
+++++|+-.|........++.+.|++.|+.+++-..
T Consensus 332 p~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~v~~d~~ 367 (434)
T 1wu7_A 332 KKSVYICRVGKINSSIMNEYSRKLRERGMNVTVEIM 367 (434)
T ss_dssp SCEEEEEEESSCCHHHHHHHHHHHHTTTCEEEECCS
T ss_pred CCcEEEEEcChHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 368888888866555567888999999999998753
No 122
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=22.61 E-value=1.8e+02 Score=19.41 Aligned_cols=50 Identities=16% Similarity=0.044 Sum_probs=29.5
Q ss_pred CCCCcEEEEeecCCCCCCCH-H-------HHHHHHHcCC--eEEEeC---------------hHHHHHHHHHhhh
Q 033161 61 RPIPEILILGCGRYIEPVNP-E-------LRQFIRSTGM--KLEAID---------------SRNAASTYNILNE 110 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~-~-------~~~~l~~~GI--~vE~m~---------------T~aAcrTyN~L~s 110 (126)
..+||+|+|--|.+=...++ + +.+.+++.+. .+-++. ..+..+.||..+.
T Consensus 72 ~~~pd~Vvi~~G~ND~~~~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~~~~~~~~~~~~~~~~~~~~n~~~~ 146 (200)
T 4h08_A 72 NTKFDVIHFNNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIAL 146 (200)
T ss_dssp HSCCSEEEECCCSSCTTSCHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCEESGGGCEECTHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEeeeCCCCCCHHHHHHHHHHHHHHHhhhCCCccEEEeccCCCcccccccccchhHHHHHHHHHHHH
Confidence 46899999988877333333 2 3345566664 444432 2356677776553
No 123
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=22.54 E-value=1.1e+02 Score=20.27 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=31.4
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEE---eChHHHHHHH
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEA---IDSRNAASTY 105 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~---m~T~aAcrTy 105 (126)
+.+.|+||.|- .-+..++.|+++||.+-. .+..+|.+.|
T Consensus 74 ~~gv~vVI~g~------IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~ 115 (136)
T 1o13_A 74 EKGAELVIVRG------IGRRAIAAFEAMGVKVIKGASGTVEEVVNQY 115 (136)
T ss_dssp HTTCSEEECSC------CCHHHHHHHHHTTCEEECSCCSBHHHHHHHH
T ss_pred HCCCCEEEECC------CCHHHHHHHHHCCCEEEecCCCCHHHHHHHH
Confidence 35799999873 578899999999999876 3567888877
No 124
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=22.34 E-value=80 Score=23.01 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=30.7
Q ss_pred hCCCCcEEEEeecCCCCC-CCHHHHHHHHHcCCeEEEeCh
Q 033161 60 VRPIPEILILGCGRYIEP-VNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 60 l~~~pevliiGTG~~~~~-~~~~~~~~l~~~GI~vE~m~T 98 (126)
+...=+++++-.|....+ ....+.+.+++.|+.+|+.+-
T Consensus 93 ~~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPG 132 (259)
T 2e0n_A 93 VQAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPG 132 (259)
T ss_dssp HHTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECC
T ss_pred HHCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCC
Confidence 334468999999999553 557788999999999999953
No 125
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=22.29 E-value=1.5e+02 Score=22.87 Aligned_cols=50 Identities=10% Similarity=0.125 Sum_probs=35.2
Q ss_pred CCCCcEEEEeecCCCC-CCCHHHHHHHHHcCCeEEEeChHHHHHHHHHhhh
Q 033161 61 RPIPEILILGCGRYIE-PVNPELRQFIRSTGMKLEAIDSRNAASTYNILNE 110 (126)
Q Consensus 61 ~~~pevliiGTG~~~~-~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L~s 110 (126)
++.+|+++.-|+.... .+..+.....-++|+.|-+.+...-...|..|..
T Consensus 80 ~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~ 130 (325)
T 3ing_A 80 GEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMD 130 (325)
T ss_dssp TSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHH
Confidence 5789999999987622 2223666667779999998876554466766654
No 126
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=22.10 E-value=33 Score=27.19 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=33.0
Q ss_pred CcEEEEeecCCC--CCCCHHHHHHHHHcCCeEEEeChHHHH
Q 033161 64 PEILILGCGRYI--EPVNPELRQFIRSTGMKLEAIDSRNAA 102 (126)
Q Consensus 64 pevliiGTG~~~--~~~~~~~~~~l~~~GI~vE~m~T~aAc 102 (126)
.-+++.||+... +..+-.+.+.++++|+.+-++.|.+.-
T Consensus 153 k~i~v~GTD~~VGK~~ts~~L~~~l~~~G~~a~~~~tgqtg 193 (349)
T 2obn_A 153 RRVLTVGTDMAIGKMSTSLELHWAAKLRGWRSKFLATGQTG 193 (349)
T ss_dssp EEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEECCSHHH
T ss_pred eEEEEcCCCccccceeHHHHHHHHHHhcCCcEEEEeccchh
Confidence 459999998773 467888999999999999999888764
No 127
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=22.09 E-value=35 Score=24.96 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=35.8
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHHHh
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNIL 108 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aAcrTyN~L 108 (126)
+.-+++.-||.....-.+++.+.|++.| .|.+.=|++|.+...-+
T Consensus 19 ~k~IllgvTGsiaa~k~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp CCEEEEEECSSGGGGGHHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCEEEEEEeCcHHHHHHHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 3568888888885555788999999999 99999999998765443
No 128
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=22.09 E-value=1.5e+02 Score=18.43 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=20.2
Q ss_pred CCCcEEEEeecCC-C--CCCCHHHHHHHHHcCCeEEE
Q 033161 62 PIPEILILGCGRY-I--EPVNPELRQFIRSTGMKLEA 95 (126)
Q Consensus 62 ~~pevliiGTG~~-~--~~~~~~~~~~l~~~GI~vE~ 95 (126)
.++|+||+|+-.. . .++..-..+.++...+.|-+
T Consensus 105 ~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~~pVlv 141 (143)
T 3fdx_A 105 LPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVLV 141 (143)
T ss_dssp TTCSEEEEESSCTTCCSCSSCHHHHHHHHHCSSEEEE
T ss_pred hCCCEEEEeCCCCCCeeeeeccHHHHHHHhCCCCEEE
Confidence 4678888887532 1 23445556666666666644
No 129
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.63 E-value=64 Score=21.73 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=23.3
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHc-CCeEEEeCh
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRST-GMKLEAIDS 98 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~-GI~vE~m~T 98 (126)
-.++|+|.|.- -..+.+.|.+. |..|-+.+.
T Consensus 40 ~~v~IiG~G~~----G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRI----GTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp CSEEEECCSHH----HHHHHHHHHHHHCSCEEEEES
T ss_pred CcEEEECCCHH----HHHHHHHHHhccCCeEEEEEC
Confidence 46999999864 34667778888 888877754
No 130
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=21.59 E-value=36 Score=26.89 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=28.8
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCe--EEEeChHHHHHHHH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMK--LEAIDSRNAASTYN 106 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~--vE~m~T~aAcrTyN 106 (126)
.+|.||+||.......+......-...|+. +..++..+||..+-
T Consensus 75 ~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~ 120 (388)
T 3v4n_A 75 AIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGAT 120 (388)
T ss_dssp HEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHH
T ss_pred cCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHH
Confidence 478999998766443332222333457775 68888889998764
No 131
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=21.55 E-value=64 Score=19.13 Aligned_cols=17 Identities=6% Similarity=0.292 Sum_probs=14.5
Q ss_pred HHHHHHHHHcCCeEEEe
Q 033161 80 PELRQFIRSTGMKLEAI 96 (126)
Q Consensus 80 ~~~~~~l~~~GI~vE~m 96 (126)
+++.++|++.||..++|
T Consensus 59 ~~f~~~L~~~~I~y~Vl 75 (78)
T 2gjf_A 59 EWFLEMLKAKGIPFTVY 75 (78)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCcEEEE
Confidence 45688889999999998
No 132
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=21.40 E-value=75 Score=19.89 Aligned_cols=17 Identities=18% Similarity=0.497 Sum_probs=14.8
Q ss_pred HHHHHHHHHcCCeEEEe
Q 033161 80 PELRQFIRSTGMKLEAI 96 (126)
Q Consensus 80 ~~~~~~l~~~GI~vE~m 96 (126)
.+..++|+++|+.+|++
T Consensus 81 ~~ai~~L~~~~v~vEvl 97 (101)
T 2qrr_A 81 SAAIEYLRENNVKVEVL 97 (101)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCEEEEe
Confidence 46778999999999987
No 133
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.38 E-value=80 Score=19.67 Aligned_cols=29 Identities=31% Similarity=0.449 Sum_probs=18.4
Q ss_pred cEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 65 EILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 65 evliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.++|+|.|.- -..+.+.|.+.|..|-+.+
T Consensus 6 ~i~IiG~G~i----G~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 6 YIIIAGIGRV----GYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp EEEEECCSHH----HHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCHH----HHHHHHHHHhCCCeEEEEE
Confidence 4677777653 3355666677777666664
No 134
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=21.31 E-value=74 Score=23.34 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=25.8
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHH
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRN 100 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~a 100 (126)
.-++|+|.| ....+.+.++++|+.+.+.+...
T Consensus 3 m~Ililg~g-----~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 3 VRIATYASH-----SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp SEEEEESST-----THHHHHHHHHHTTCCEEEESCGG
T ss_pred eEEEEECCh-----hHHHHHHHHHhCCCEEEEEECCC
Confidence 358899988 45678889999999999887664
No 135
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=21.26 E-value=39 Score=25.39 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=20.7
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcC
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTG 90 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~G 90 (126)
+.-++|.||||.+...+-+.+.+..++.|
T Consensus 26 ~dg~~IgLgsGST~~~~~~~L~~~~~~~~ 54 (244)
T 2f8m_A 26 QSNMTIGLGTGSTVFYVLERIDNLLKSGK 54 (244)
T ss_dssp CTTCEEEECCSTTTHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEcChHHHHHHHHHHhhhhhccC
Confidence 35789999999998766666655554453
No 136
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=21.21 E-value=75 Score=18.81 Aligned_cols=17 Identities=6% Similarity=0.292 Sum_probs=14.3
Q ss_pred HHHHHHHHHcCCeEEEe
Q 033161 80 PELRQFIRSTGMKLEAI 96 (126)
Q Consensus 80 ~~~~~~l~~~GI~vE~m 96 (126)
+.+.+.|+++||..++|
T Consensus 51 ~~f~~~L~~~~i~~~v~ 67 (79)
T 1vjq_A 51 EWFLEMLKAKGIPFTVY 67 (79)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCcEEEE
Confidence 35578888999999998
No 137
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=21.19 E-value=60 Score=22.17 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=25.6
Q ss_pred EEEEeecCCCC-CCCHHHHHHHHHcCCeEEEeC
Q 033161 66 ILILGCGRYIE-PVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 66 vliiGTG~~~~-~~~~~~~~~l~~~GI~vE~m~ 97 (126)
+=++|.|.... -....+.+.|.+.||.++.++
T Consensus 106 vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 106 VSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp EEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred EEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 56788887743 466889999999999998874
No 138
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=21.12 E-value=33 Score=27.79 Aligned_cols=35 Identities=11% Similarity=0.213 Sum_probs=28.1
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
.+|++|+..|.....-.-++.+.|++.|+.+|+..
T Consensus 361 ~~~v~v~~~~~~~~~~a~~la~~LR~~Gi~ve~~~ 395 (456)
T 3lc0_A 361 VVDDVVIPFDESMRPHALAVLRRLRDAGRSADIIL 395 (456)
T ss_dssp CEEEEEEESSGGGHHHHHHHHHHHHHTTCCEEECC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHHHHHCCCeEEEec
Confidence 57889998887654455677889999999999974
No 139
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=20.92 E-value=88 Score=24.39 Aligned_cols=53 Identities=11% Similarity=0.023 Sum_probs=36.2
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH-HHHHHHHHhhhcccee
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR-NAASTYNILNEEGRIV 115 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~-aAcrTyN~L~sEgR~V 115 (126)
+++++|+-.|........++.+.|++.|+.+++-+.. .-=+.|+.-...|=+.
T Consensus 298 p~~v~vi~~~~~~~~~a~~l~~~Lr~~Gi~v~~d~~~~~~~~k~~~A~~~g~p~ 351 (401)
T 1evl_A 298 PVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPY 351 (401)
T ss_dssp SSCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEECCSSCHHHHHHHHHHTTCSE
T ss_pred CeEEEEEecCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHhcCCCE
Confidence 4689999888666666678889999999999987542 3444444433344343
No 140
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=20.83 E-value=74 Score=19.90 Aligned_cols=17 Identities=18% Similarity=0.102 Sum_probs=14.8
Q ss_pred HHHHHHHHHcCCeEEEe
Q 033161 80 PELRQFIRSTGMKLEAI 96 (126)
Q Consensus 80 ~~~~~~l~~~GI~vE~m 96 (126)
.+..++|+++|+.+|++
T Consensus 81 ~~ai~~L~~~~v~vEvl 97 (100)
T 2qsw_A 81 LAAIEGLRKLRVETEVI 97 (100)
T ss_dssp HHHHHHHHHTTCEEEES
T ss_pred HHHHHHHHHcCCEEEEc
Confidence 46678999999999987
No 141
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=20.82 E-value=52 Score=25.65 Aligned_cols=37 Identities=14% Similarity=0.037 Sum_probs=28.2
Q ss_pred CCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHH
Q 033161 62 PIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNA 101 (126)
Q Consensus 62 ~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aA 101 (126)
-+++- ||-|-... -+|++.+.++++||.+|+.+|.+-
T Consensus 216 lg~~r--IgHgv~l~-~d~~l~~~l~~~~i~le~cP~SN~ 252 (343)
T 3rys_A 216 LHVER--IDHGIRCM-EDTDVVQRLVAEQVPLTVCPLSNV 252 (343)
T ss_dssp SCCSE--EEECGGGG-GCHHHHHHHHHHTCCEEECHHHHH
T ss_pred CCcce--eeeeeeec-CChHHHHHHHhcCCCeeEchhHHH
Confidence 34664 67666543 258999999999999999998764
No 142
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=20.78 E-value=58 Score=23.73 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=24.4
Q ss_pred CcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeCh
Q 033161 64 PEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDS 98 (126)
Q Consensus 64 pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T 98 (126)
.|++|||-|..- -.+...|.+.|+.|-+..-
T Consensus 3 ~dV~IIGaG~~G----l~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 3 VPIAIIGTGIAG----LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHH----HHHHHHHHHTTCCEEEECS
T ss_pred ceEEEECCcHHH----HHHHHHHHHCCCcEEEEEC
Confidence 689999999863 2566778889999988754
No 143
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=20.68 E-value=1e+02 Score=22.89 Aligned_cols=36 Identities=8% Similarity=0.194 Sum_probs=24.2
Q ss_pred hhCCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeC
Q 033161 59 LVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAID 97 (126)
Q Consensus 59 ~l~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~ 97 (126)
++.-+||+||...+.. .-..+..+.|++.| .+.+++
T Consensus 111 I~~l~PDLIi~~~~~~--~~~~~~~~~L~~~g-pvv~~~ 146 (326)
T 3tlk_A 111 VAAQMPDLILISATGG--DSALALYDQLSTIA-PTLIIN 146 (326)
T ss_dssp HHTTCCSEEEEESSST--TCCGGGHHHHHTTS-CEEEEC
T ss_pred HhhCCCCEEEEeCCCc--cchHHHHHHHHhhC-CEEEEc
Confidence 4456799988765432 12357788899999 666664
No 144
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=20.57 E-value=63 Score=21.52 Aligned_cols=36 Identities=8% Similarity=0.043 Sum_probs=23.1
Q ss_pred CCCCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChH
Q 033161 61 RPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSR 99 (126)
Q Consensus 61 ~~~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~ 99 (126)
...+|++++-+.. ...+++.+.+.++|++..++.+.
T Consensus 67 ~~~vDlvii~vp~---~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 67 PKDVDVIVFVVPP---KVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp CTTCCEEEECSCH---HHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCCEEEEEeCH---HHHHHHHHHHHHcCCCEEEEcCc
Confidence 3468999998863 22234444455688888777663
No 145
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=20.47 E-value=62 Score=25.48 Aligned_cols=36 Identities=22% Similarity=0.174 Sum_probs=28.2
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNA 101 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aA 101 (126)
+++- ||-|-... -+|++.+.++++||.+|+.+|.+-
T Consensus 229 g~~R--IgHgv~l~-~d~~l~~~l~~~~i~le~cP~SN~ 264 (367)
T 3iar_A 229 KTER--LGHGYHTL-EDQALYNRLRQENMHFEICPWSSY 264 (367)
T ss_dssp CCSE--EEECGGGG-GCHHHHHHHHHTTCEEEECHHHHH
T ss_pred CCce--eeeeeeec-CCHHHHHHHHhCCcEEEECHHHHH
Confidence 4664 67776643 268999999999999999988764
No 146
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=20.37 E-value=80 Score=21.26 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=34.5
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHc---CCeEEEeC------hHHHHHHHHHhhh
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRST---GMKLEAID------SRNAASTYNILNE 110 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~---GI~vE~m~------T~aAcrTyN~L~s 110 (126)
+.|.||||+....-.+++.++.+|.+. |-.+-+.. .+.|.+....++.
T Consensus 78 ~yd~iilG~P~~~g~~~~~~~~fl~~~~l~gk~v~~f~t~g~~~~g~~~~~l~~~l~ 134 (162)
T 3klb_A 78 KYEVLFVGFPVWWYIAPTIINTFLESYDFAGKIVVPFATSGGSGIGNCEKNLHKAYP 134 (162)
T ss_dssp GCSEEEEEEECBTTBCCHHHHHHHHTSCCTTCEEEEEEECSSCCSHHHHHHHHHHCT
T ss_pred hCCEEEEEcccccCCCCHHHHHHHHhcCCCCCEEEEEEEeCCCCccHHHHHHHHHcC
Confidence 479999999988878899999999873 33333332 2466777777764
No 147
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=20.33 E-value=54 Score=25.32 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=27.3
Q ss_pred CCcEEEEeecCCCCCCCHHHHHHHHHcCCeEEEeChHHH
Q 033161 63 IPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNA 101 (126)
Q Consensus 63 ~pevliiGTG~~~~~~~~~~~~~l~~~GI~vE~m~T~aA 101 (126)
+++- ||-|-... -+|++.+.++++||.+|+.+|.+-
T Consensus 214 g~~r--igHgv~l~-~d~~l~~~l~~~~i~le~cP~SN~ 249 (326)
T 3pao_A 214 KVER--IDHGVRAF-EDERLMRRLIDEQIPLTVCPLSNT 249 (326)
T ss_dssp CCSS--EEECGGGG-GCHHHHHHHHHHTCCEEECHHHHH
T ss_pred CCce--eeeeeeec-ccHHHHHHHHHcCCeEEECchhHH
Confidence 3554 57666543 258899999999999999988764
No 148
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus}
Probab=20.07 E-value=1e+02 Score=22.40 Aligned_cols=40 Identities=8% Similarity=0.171 Sum_probs=30.6
Q ss_pred hhhCCCCcEEEEeecCCCCC-CCHHHHHHHHH----cCCeEEEeC
Q 033161 58 QLVRPIPEILILGCGRYIEP-VNPELRQFIRS----TGMKLEAID 97 (126)
Q Consensus 58 ~~l~~~pevliiGTG~~~~~-~~~~~~~~l~~----~GI~vE~m~ 97 (126)
+.+...-+++++-.|....+ .-.++.+.+.+ .|+.+|+.+
T Consensus 73 ~~~~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~~~~~gi~veviP 117 (251)
T 3nut_A 73 EMAAEGRRVVVVSSGDPGVFAMASALFEALEAHPEHAGTEIRILP 117 (251)
T ss_dssp HHHHTTCEEEEEESBCTTSSSHHHHHHHHHHHCGGGTTCCEEEEC
T ss_pred HHHHCCCeEEEEeCCCcccccCHHHHHHHHHhhcccCCCcEEEEC
Confidence 34445678999998888554 44678888887 899999994
No 149
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=20.01 E-value=67 Score=24.46 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=33.2
Q ss_pred hhhCCCCcEEEEe-ecCCCCC-CCHHHHHHHHHcCCeEEEeChHHHH
Q 033161 58 QLVRPIPEILILG-CGRYIEP-VNPELRQFIRSTGMKLEAIDSRNAA 102 (126)
Q Consensus 58 ~~l~~~pevliiG-TG~~~~~-~~~~~~~~l~~~GI~vE~m~T~aAc 102 (126)
+.+..+-+++++- .|....+ +..++.+.+++.||.|++.+-..|+
T Consensus 83 ~~l~~G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~ 129 (296)
T 3kwp_A 83 AKLKQGMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAG 129 (296)
T ss_dssp HHHHTTCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHH
T ss_pred HHHhcCceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccc
Confidence 3444566788887 7888553 5567888999999999999655443
Done!