BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033164
(126 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
gi|131398|sp|P27202.1|PSBR_ARATH RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|16447|emb|CAA39441.1| photosystem II 10 kDa polypeptide [Arabidopsis thaliana]
gi|3152571|gb|AAC17052.1| Match to photosystem II 10kDa polypeptide gb|X55970. ESTs
gb|Z17693, gb|N37616, gb|T41858, gb|T88021, gb|R37531,
gb|T04679, gb|N37520, gb|N64965, gb|Z17592 and
gb|N65338, gb|N37466 and gb|T45400 come from this gene
[Arabidopsis thaliana]
gi|17979203|gb|AAL49840.1| putative photosystem II polypeptide protein [Arabidopsis thaliana]
gi|20465469|gb|AAM20194.1| putative photosystem II polypeptide [Arabidopsis thaliana]
gi|21536748|gb|AAM61080.1| photosystem II polypeptide, putative [Arabidopsis thaliana]
gi|110740828|dbj|BAE98511.1| PSII-R protein [Arabidopsis thaliana]
gi|332198075|gb|AEE36196.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 116/140 (82%), Gaps = 14/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KG GVY++VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAG+LAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|118489740|gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 113/137 (82%), Gaps = 12/137 (8%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLRE 60
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR+
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKIKTDTPYGTGGGMNLRD 59
Query: 61 GLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAG 109
GLDASGRK KGKGVYQ+VDKYGANVDGYS GDVY GG TGL IWAVTLAG
Sbjct: 60 GLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAG 119
Query: 110 LLAGGALLVYNTSALAQ 126
+LAGGALLVY+TSALAQ
Sbjct: 120 ILAGGALLVYSTSALAQ 136
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|967968|gb|AAA74957.1| photosystem II 10kDa polypeptide [Brassica rapa subsp. campestris]
Length = 141
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 115/141 (81%), Gaps = 15/141 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAV 105
DLR+G+DASGRK KG GVY+FVDKYGANVDGY SGDVY GG TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAG+LAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 114/140 (81%), Gaps = 14/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAAS+M SS++LKPA FTVEK + RGLPSL A +SFKIVA G KIKTDKP+GVNG MD
Sbjct: 1 MAASLMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+GLDASGRK KG GVY+FVDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 120
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAG+LAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489823|gb|ABK96711.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 113/138 (81%), Gaps = 13/138 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLA 108
+GLDASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGL IWAVTLA
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLA 119
Query: 109 GLLAGGALLVYNTSALAQ 126
G+LAGGALLVY+TSALAQ
Sbjct: 120 GILAGGALLVYSTSALAQ 137
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
gi|118487848|gb|ABK95747.1| unknown [Populus trichocarpa]
gi|222875313|gb|EEF12444.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
Length = 137
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/138 (73%), Positives = 113/138 (81%), Gaps = 13/138 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLA 108
+GLDASGRK KGKGVYQ+VDKYGANVDGYS GDVY GG TGL IWAVTLA
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLA 119
Query: 109 GLLAGGALLVYNTSALAQ 126
G+LAGGALLVY+TSALAQ
Sbjct: 120 GILAGGALLVYSTSALAQ 137
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis hypogaea]
Length = 129
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/129 (75%), Positives = 109/129 (84%), Gaps = 14/129 (10%)
Query: 12 LKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRK 68
LKPAPFT E+S+ RG+PSL++ +SFK+VA GGK IKTDKPYG+NGGM+LR+GLDASGRK
Sbjct: 1 LKPAPFTAERSSVRGIPSLSRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRK 60
Query: 69 AKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLLAGGALL 117
KGKGVYQFVDKYGANVDGYS GDVYTGG TGLAIWAVTL GLLAGGALL
Sbjct: 61 GKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGALL 120
Query: 118 VYNTSALAQ 126
VYNTSAL+Q
Sbjct: 121 VYNTSALSQ 129
>gi|284520974|gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Jatropha curcas]
Length = 137
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 113/138 (81%), Gaps = 13/138 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MA SVMAS +SLKP+PF+V+KS+ RGLP L++ +FK+ A GGK IKTDKPYG+ GGM+LR
Sbjct: 1 MATSVMAS-VSLKPSPFSVQKSSVRGLPKLSRRAFKVEAGGGKKIKTDKPYGIGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLA 108
GLDASGRKA GKGVYQ+VDKYGANVDGYS GDVY GG TGLAIWAVTL
Sbjct: 60 NGLDASGRKATGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGTTGLAIWAVTLL 119
Query: 109 GLLAGGALLVYNTSALAQ 126
G+LAGGALLVYNTSALAQ
Sbjct: 120 GILAGGALLVYNTSALAQ 137
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 114/141 (80%), Gaps = 15/141 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM S ++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAV 105
DLR+G+DASGRK KG GVY+FVD+YGANVDGY SGDVY GG TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 120
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAG+LAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|224115372|ref|XP_002317015.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
gi|118488264|gb|ABK95951.1| unknown [Populus trichocarpa]
gi|222860080|gb|EEE97627.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
Length = 137
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 111/138 (80%), Gaps = 13/138 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS L+LKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LNLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLA 108
GLDASGRK +GKGVYQ+VDKYGANVDGY SGDVY GG TGL IWAVTLA
Sbjct: 60 NGLDASGRKPRGKGVYQYVDKYGANVDGYSPIYNADEWSPSGDVYAGGKTGLLIWAVTLA 119
Query: 109 GLLAGGALLVYNTSALAQ 126
G+LAGGALLVY TSALAQ
Sbjct: 120 GILAGGALLVYTTSALAQ 137
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassica rapa subsp.
pekinensis]
Length = 137
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 111/137 (81%), Gaps = 14/137 (10%)
Query: 4 SVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMDLRE 60
SVM SS++LKPA FTVEK + RGLPSL A +SFKIVA G KIKTDKP+GVNG MDLR+
Sbjct: 1 SVMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD 60
Query: 61 GLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAG 109
GLDASGRK KG GVY+FVDKYGANVDGY SGDVY GG TGLAIWAVTLAG
Sbjct: 61 GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAG 120
Query: 110 LLAGGALLVYNTSALAQ 126
+LAGGALLVYNTSALAQ
Sbjct: 121 ILAGGALLVYNTSALAQ 137
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Short=PII10; Flags: Precursor
gi|22669|emb|CAA49693.1| NtpII10 [Nicotiana tabacum]
Length = 136
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 112/140 (80%), Gaps = 18/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KGKGVYQFVDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVT 116
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLV+NTSALAQ
Sbjct: 117 LVGILAGGALLVFNTSALAQ 136
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 114/140 (81%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+GLDASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 59 LRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LVGILAGGALLVYNTSALAQ 138
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor
gi|21489|emb|CAA28450.1| ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa polypeptide [Solanum tuberosum]
Length = 138
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LVGILAGGALLVYNTSALAQ 138
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
gi|297333606|gb|EFH64024.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
Length = 133
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 109/133 (81%), Gaps = 14/133 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKAAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KG GVY++VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 107 LAGLLAGGALLVY 119
LAG+LAGGALLVY
Sbjct: 121 LAGILAGGALLVY 133
>gi|351722140|ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 118/140 (84%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA GGK IKTDKPYG+NGGM
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMA 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
LREG+DASGRK KGKGVYQFVDKYGANVDGYS GDVY GG TGLAIWAVT
Sbjct: 60 LREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L GLLAGGALLVYNTSALAQ
Sbjct: 120 LLGLLAGGALLVYNTSALAQ 139
>gi|350537547|ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum]
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1217642|emb|CAA65231.1| PSII polypeptide [Solanum lycopersicum]
Length = 138
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 112/140 (80%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LLGILAGGALLVYNTSALAQ 138
>gi|351722402|ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycine max]
gi|255626523|gb|ACU13606.1| unknown [Glycine max]
Length = 138
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 115/139 (82%), Gaps = 14/139 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA G KIKTDKPYG+NGGM L
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGKKIKTDKPYGINGGMAL 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
R+G DASGRK KGKGVYQFVDKYGANVDGYS GDVY GG TGLAIWAVTL
Sbjct: 60 RDGTDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTL 119
Query: 108 AGLLAGGALLVYNTSALAQ 126
GLLAGGALLVYNTSAL Q
Sbjct: 120 LGLLAGGALLVYNTSALVQ 138
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 105/131 (80%), Gaps = 15/131 (11%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASG 66
LSLKP FT+EK + +GLPSL ++S FK+VA+G K+KTDKPYG+NG M LR+G+DASG
Sbjct: 1 LSLKPT-FTLEKISVKGLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDASG 59
Query: 67 RKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGA 115
RK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVTL G+LAGGA
Sbjct: 60 RKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGA 119
Query: 116 LLVYNTSALAQ 126
LLVYNTSALAQ
Sbjct: 120 LLVYNTSALAQ 130
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis]
gi|223530550|gb|EEF32429.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis]
Length = 138
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/139 (73%), Positives = 117/139 (84%), Gaps = 14/139 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAA-RGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MA+SVMAS +SLKP+PFTV+KS++ RGLP+L++ +F+I A GGK IKTDKPYG+ GGM+L
Sbjct: 1 MASSVMAS-VSLKPSPFTVQKSSSVRGLPTLSRRTFRIEASGGKKIKTDKPYGIGGGMEL 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
R G+DASGRK GKGVYQFVDKYGANVDGYS GDVY GGATGLAIWA+TL
Sbjct: 60 RNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITL 119
Query: 108 AGLLAGGALLVYNTSALAQ 126
AGLLAGGALLVYNTSALAQ
Sbjct: 120 AGLLAGGALLVYNTSALAQ 138
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
Length = 139
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 118/140 (84%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPAPFTVEKSA RGLPSL+++S FK+VA GGK IKTDKPYG+NGGM+
Sbjct: 1 MASSVMAS-VSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
L EG+D+SGRK KGKGVYQFVDKYG NVDGY SGDVY GG TGLAIWAVT
Sbjct: 60 LVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAVT 119
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAGLLAGGALLVYNTSALAQ
Sbjct: 120 LAGLLAGGALLVYNTSALAQ 139
>gi|225462227|ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera]
gi|147789486|emb|CAN71762.1| hypothetical protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product [Vitis vinifera]
Length = 139
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 113/140 (80%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM SSLSLKP+PF+VE+ A RGLPSLA++S F++ A GGK IKTDKPYG+ GGM
Sbjct: 1 MAASVM-SSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMK 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
L +GLDASGRK KGKGVYQFVDKYGANVDGYS GDVY GG TGL IWAVT
Sbjct: 60 LSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVT 119
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAGLL GGALLVYNTSALAQ
Sbjct: 120 LAGLLLGGALLVYNTSALAQ 139
>gi|449460036|ref|XP_004147752.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449460038|ref|XP_004147753.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449502146|ref|XP_004161556.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449502150|ref|XP_004161557.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 138
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 116/140 (82%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSF--KIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM +S+SLKPAPFTVEKSA+ GLPSLA+ SF K+VA GGK IKTDKPYG+NG M+
Sbjct: 1 MAASVM-TSVSLKPAPFTVEKSAS-GLPSLARKSFSFKVVASGGKKIKTDKPYGINGSMN 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
LR+GLDASGRK KGKGVYQFVDKYGANVDGYS GDVY GG TGLAIWA T
Sbjct: 59 LRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYVGGTTGLAIWAAT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAGLLAGGALLVYNTSAL Q
Sbjct: 119 LAGLLAGGALLVYNTSALVQ 138
>gi|33694227|gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
Length = 136
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/138 (73%), Positives = 111/138 (80%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-VSLKPTPFMVEKSSVRGLPNLSR-PFRVVASGVKKIKTDTPYGTGGGMDLP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLA 108
GLDASGRK KGKGVYQFVDKYGANVDGYS GDVYTGG TGLAIWAVTLA
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLA 118
Query: 109 GLLAGGALLVYNTSALAQ 126
GLLAGGALLVYNTSAL+Q
Sbjct: 119 GLLAGGALLVYNTSALSQ 136
>gi|224115278|ref|XP_002332205.1| predicted protein [Populus trichocarpa]
gi|222875312|gb|EEF12443.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 113/138 (81%), Gaps = 14/138 (10%)
Query: 3 ASVMASSLSLKPAPFTVEK-SAARGLPSLAK-TSFKIVA-KGGKIKTDKPYGVNGGMDLR 59
+SVMA S+SLKPAPFTV+K S+ RGLP+LA+ +SFK+ A + K TD+PYG+NGGMDLR
Sbjct: 4 SSVMAPSISLKPAPFTVKKPSSVRGLPTLARRSSFKVEASRTRKTNTDQPYGINGGMDLR 63
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLA 108
EG+DASGRK KGKGVYQFVDKYGANVDGY SGDVY GG TGL IWAVTLA
Sbjct: 64 EGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYNTNDWSPSGDVYVGGKTGLLIWAVTLA 123
Query: 109 GLLAGGALLVYNTSALAQ 126
GLLAGGALLVY+TSALAQ
Sbjct: 124 GLLAGGALLVYSTSALAQ 141
>gi|388503488|gb|AFK39810.1| unknown [Lotus japonicus]
gi|388512023|gb|AFK44073.1| unknown [Lotus japonicus]
Length = 139
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPA F++EKS+ RGLPSL+++S F++VA GGK IKTD PYG GGM+
Sbjct: 1 MASSVMAS-VSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
LR G+DASGRK +GKGVYQ+VDKYGANVDGYS GDVY GG TGLAIWAVT
Sbjct: 60 LRNGVDASGRKPRGKGVYQYVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L GLLAGGALLVYNTSAL+Q
Sbjct: 120 LLGLLAGGALLVYNTSALSQ 139
>gi|357451409|ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485029|gb|AES66232.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|388509646|gb|AFK42889.1| unknown [Medicago truncatula]
Length = 136
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 110/138 (79%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLA 108
+G DASGRK KGKGVYQFVDKYGANVDGYS GDVYTGG TGLAIWAVTLA
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLA 118
Query: 109 GLLAGGALLVYNTSALAQ 126
GLLAGGALLVYNTSAL+Q
Sbjct: 119 GLLAGGALLVYNTSALSQ 136
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/141 (68%), Positives = 108/141 (76%), Gaps = 15/141 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAV 105
DLR+G+DASGRK KG GVY+FVDKYGANVDGYS GD Y GG TGL WA
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKGGVTGLVFWAA 120
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAGLL GG L+VYNT ALAQ
Sbjct: 121 TLAGLLGGGPLVVYNTGALAQ 141
>gi|146454590|gb|ABQ41961.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 121
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 90/110 (81%), Gaps = 13/110 (11%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGR 60
Query: 68 KAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
K +GKGVYQFVDKYGANVDGY SGDVY GG+TGLAIWAVT
Sbjct: 61 KPRGKGVYQFVDKYGANVDGYSPIYDTNDWSPSGDVYVGGSTGLAIWAVT 110
>gi|146454592|gb|ABQ41962.1| photosystem II 10 kDa polypeptide [Sonneratia caseolaris]
Length = 121
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 90/110 (81%), Gaps = 13/110 (11%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 68 KAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
K KGKGVYQFVDKYGANVDGYS GDVY GG+TGLAIWAVT
Sbjct: 61 KPKGKGVYQFVDKYGANVDGYSPIYDTNDWSPGGDVYVGGSTGLAIWAVT 110
>gi|112292665|gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
terminalis]
Length = 138
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 109/140 (77%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MA SVM SSLSLK +PF +EKSAARGLPSLA+ +SF++ A G KIKTDKPYG GGM
Sbjct: 1 MATSVM-SSLSLKASPF-LEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMS 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+GLDASGRK KGKGVYQFVDKYGANVDGY SG VY GG TGL +WA+T
Sbjct: 59 LRDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAIT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LA LL GGALLVYNTSAL+Q
Sbjct: 119 LAALLLGGALLVYNTSALSQ 138
>gi|146454594|gb|ABQ41963.1| photosystem II 10 kDa polypeptide [Sonneratia ovata]
gi|146454596|gb|ABQ41964.1| photosystem II 10 kDa polypeptide [Sonneratia apetala]
Length = 121
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 90/110 (81%), Gaps = 13/110 (11%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 68 KAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
K +GKGVYQFVDKYGANVDGY SGDVY GG+TGLAIWAVT
Sbjct: 61 KPRGKGVYQFVDKYGANVDGYSPIYDTNDWSPSGDVYVGGSTGLAIWAVT 110
>gi|242042938|ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
gi|241922717|gb|EER95861.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
Length = 137
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 100/137 (72%), Gaps = 13/137 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PF PS ++F+++AK K IKT +P+G GG++L+
Sbjct: 1 MAASVMAS-LSLKPSPFLDRSRFTSVQPSARSSTFRVMAKKTKKIKTSQPFGPAGGLNLK 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLA 108
+G+DASGR AKGKGVYQF +KYGANVDGY SGDVY GG TGL +WAVTLA
Sbjct: 60 DGVDASGRPAKGKGVYQFANKYGANVDGYSPIYNPEEWSPSGDVYVGGKTGLLLWAVTLA 119
Query: 109 GLLAGGALLVYNTSALA 125
G+L GGALL+YNTSALA
Sbjct: 120 GILLGGALLIYNTSALA 136
>gi|213512148|ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloroplast [Salmo salar]
gi|209730436|gb|ACI66087.1| Photosystem II 10 kDa polypeptide, chloroplast precursor [Salmo
salar]
Length = 138
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 102/138 (73%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTV-EKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDL 58
M+ASVMAS L+LKP+P + E+S RG+ A+ S IVA K KI+T +PYG GG+D
Sbjct: 1 MSASVMAS-LALKPSPPPLWERSKIRGVRPSARPSLLIVASKVKKIQTAQPYGPGGGVDF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
++GLDASGR AKGKGVYQF +KYGANVDGYS GDVY GG TGL +WAVTL
Sbjct: 60 KDGLDASGRVAKGKGVYQFANKYGANVDGYSPIYTPEEWSPGGDVYVGGKTGLFLWAVTL 119
Query: 108 AGLLAGGALLVYNTSALA 125
AG+L GGALLVYNTSALA
Sbjct: 120 AGILLGGALLVYNTSALA 137
>gi|224115376|ref|XP_002317016.1| predicted protein [Populus trichocarpa]
gi|118483083|gb|ABK93451.1| unknown [Populus trichocarpa]
gi|222860081|gb|EEE97628.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 105/136 (77%), Gaps = 14/136 (10%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDLREG 61
+SVMASS+SLKPAPFTV+K + ++SFK+ A + K KTD+PYG+NGGMDLR G
Sbjct: 4 SSVMASSMSLKPAPFTVKKPSLPS--LSRRSSFKVEASRSRKSKTDQPYGINGGMDLRGG 61
Query: 62 LDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGL 110
LDASGRK KGKGVYQFVDKYGANVDGY SG+VY GG TGL IWAVTLAGL
Sbjct: 62 LDASGRKGKGKGVYQFVDKYGANVDGYSPIYDPKDWSPSGEVYVGGTTGLLIWAVTLAGL 121
Query: 111 LAGGALLVYNTSALAQ 126
LAGGALLVYNTSAL Q
Sbjct: 122 LAGGALLVYNTSALVQ 137
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|170127|gb|AAA34037.1| 10kd polypeptide precursor [Spinacia oleracea]
Length = 140
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/141 (68%), Positives = 108/141 (76%), Gaps = 16/141 (11%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAV 105
LR+G+D+SGRK GKGVYQFVDKYGANVDGYS GDVY GG TGL IWAV
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAV 119
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAGLLAGGALLVYNTSALAQ
Sbjct: 120 TLAGLLAGGALLVYNTSALAQ 140
>gi|25989650|gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
Length = 139
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 106/140 (75%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS+M SSL+LKPA E+S+ +GLPSL ++S FK+ A GGK IKT PYG GGM+
Sbjct: 1 MAASMM-SSLALKPATPVFERSSVKGLPSLVRSSSSFKVQASGGKKIKTATPYGPGGGMN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
L GLDASGRK KGKGVYQFVDKYGANVDGY SGDVY GG TGL +WA+T
Sbjct: 60 LPAGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLIVWAIT 119
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAGLL GGALLVY+TSALAQ
Sbjct: 120 LAGLLGGGALLVYSTSALAQ 139
>gi|269930242|gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 107/140 (76%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMD 57
MA+SV+ SSLSLKP+P + +S +GLPSLA+ + + K G KIKTD P+G+ GGM
Sbjct: 1 MASSVI-SSLSLKPSPISA-RSPVKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMK 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
L++GLDASGRK KGKGVYQFVDKYGANVDGY SGDVY GG TGL IWAVT
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAGLLAGGALLVYNTSALAQ
Sbjct: 119 LAGLLAGGALLVYNTSALAQ 138
>gi|115470575|ref|NP_001058886.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|22831113|dbj|BAC15975.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|50509251|dbj|BAD30534.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|113610422|dbj|BAF20800.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|215692793|dbj|BAG88237.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199086|gb|EEC81513.1| hypothetical protein OsI_24891 [Oryza sativa Indica Group]
Length = 137
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 100/138 (72%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
+EG+DASGR AKGKG+YQF +KYGANVDGYS GDVY GG GL +WA+TL
Sbjct: 60 KEGVDASGRVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITL 119
Query: 108 AGLLAGGALLVYNTSALA 125
AG+L GGA+LVYNTSALA
Sbjct: 120 AGILVGGAILVYNTSALA 137
>gi|222636434|gb|EEE66566.1| hypothetical protein OsJ_23089 [Oryza sativa Japonica Group]
Length = 139
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 100/139 (71%), Gaps = 15/139 (10%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG +
Sbjct: 1 MAASVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
L++G+DASGR KGKGVYQF KYGANVDGY SGDVYTGG TGL +WAVT
Sbjct: 60 LKDGVDASGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDVYTGGKTGLLLWAVT 119
Query: 107 LAGLLAGGALLVYNTSALA 125
L+G+L GALLVYNTSALA
Sbjct: 120 LSGILLAGALLVYNTSALA 138
>gi|357111682|ref|XP_003557641.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Brachypodium distachyon]
Length = 139
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 13/138 (9%)
Query: 1 MAASVMASS-LSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS+ L P+PF + PS SF++++K K ++T +P+G GG++L
Sbjct: 1 MAASVMASTALKPSPSPFIGQPRLRAIQPSARSPSFRVMSKKAKKVQTSQPFGPGGGLEL 60
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTL 107
++G+DASGR AKGKGVYQF KYGANVDGY SGD Y GG TGL +WAVTL
Sbjct: 61 KDGVDASGRPAKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDFYAGGKTGLLLWAVTL 120
Query: 108 AGLLAGGALLVYNTSALA 125
AG+L GGALL+YNTS+LA
Sbjct: 121 AGILLGGALLIYNTSSLA 138
>gi|218199087|gb|EEC81514.1| hypothetical protein OsI_24892 [Oryza sativa Indica Group]
Length = 139
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 100/139 (71%), Gaps = 15/139 (10%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA SVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG++
Sbjct: 1 MATSVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGLN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
L++G+DASGR KGKGVYQF KYGANVDGY SGD+YTGG TGL +WAVT
Sbjct: 60 LKDGVDASGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDLYTGGKTGLLLWAVT 119
Query: 107 LAGLLAGGALLVYNTSALA 125
L+G+L GALLVYNTSALA
Sbjct: 120 LSGILLAGALLVYNTSALA 138
>gi|222636433|gb|EEE66565.1| hypothetical protein OsJ_23088 [Oryza sativa Japonica Group]
Length = 137
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 99/138 (71%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
+EG+DASG AKGKG+YQF +KYGANVDGYS GDVY GG GL +WA+TL
Sbjct: 60 KEGVDASGMVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITL 119
Query: 108 AGLLAGGALLVYNTSALA 125
AG+L GGA+LVYNTSALA
Sbjct: 120 AGILVGGAILVYNTSALA 137
>gi|241865170|gb|ACS68663.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
gi|241865402|gb|ACS68733.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 114
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 93/113 (82%), Gaps = 13/113 (11%)
Query: 20 EKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQF 77
E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G DASGRK +GKGVYQF
Sbjct: 2 ERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGRKPRGKGVYQF 61
Query: 78 VDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGALLVY 119
VDKYGANVDGY SGDVY GG+TGLAIWAVTL GLLAGGALLVY
Sbjct: 62 VDKYGANVDGYSPIYDTNDWSPSGDVYVGGSTGLAIWAVTLLGLLAGGALLVY 114
>gi|226502122|ref|NP_001148037.1| photosystem II3 [Zea mays]
gi|195610816|gb|ACG27238.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195615454|gb|ACG29557.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617002|gb|ACG30331.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617342|gb|ACG30501.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195618136|gb|ACG30898.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195623906|gb|ACG33783.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|413921085|gb|AFW61017.1| photosystem II polypeptide [Zea mays]
Length = 128
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 97/138 (70%), Gaps = 24/138 (17%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ GG+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGGGLTV 51
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
+DA+GRK KGKGVYQFVDKYGANVDGYS GDVY GG TGL IWAVTL
Sbjct: 52 D--VDANGRKGKGKGVYQFVDKYGANVDGYSPIYNEDDWSPTGDVYVGGTTGLLIWAVTL 109
Query: 108 AGLLAGGALLVYNTSALA 125
AG+L GGALLVYNTSAL+
Sbjct: 110 AGILGGGALLVYNTSALS 127
>gi|283101080|gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|339716046|gb|AEJ88270.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 104/140 (74%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMD 57
M +SV+ SSLSLKP+P + +S +GLPSLA+ + + K G KIKTD P+G GGM
Sbjct: 1 MTSSVI-SSLSLKPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMK 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
L++GLDASGRK KGKGVYQFVDKYGANVDGY SGDVY GG TGL IWA T
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAAT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAGLLAGGALLVYNTSALAQ
Sbjct: 119 LAGLLAGGALLVYNTSALAQ 138
>gi|3914470|sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1321868|emb|CAA66373.1| 10kD PSII protein [Hordeum vulgare]
gi|326521128|dbj|BAJ96767.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532058|dbj|BAK01405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 99/139 (71%), Gaps = 16/139 (11%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
+EG+DASGR AKGKGVYQF DKYGANVDGY SGDVY GG TGL +WAVT
Sbjct: 59 FKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVT 118
Query: 107 LAGLLAGGALLVYNTSALA 125
LAG+L GGALLVY+TSALA
Sbjct: 119 LAGILLGGALLVYSTSALA 137
>gi|195619612|gb|ACG31636.1| photosystem II 10 kDa polypeptide [Zea mays]
Length = 128
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 95/138 (68%), Gaps = 24/138 (17%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ G+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGXGLTV 51
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTL 107
+DA+GRK KGKGVY FVDKYGANVDGYS GDVY GG TGL IWAVTL
Sbjct: 52 D--VDANGRKGKGKGVYHFVDKYGANVDGYSPIYNEDDWSPTGDVYVGGTTGLLIWAVTL 109
Query: 108 AGLLAGGALLVYNTSALA 125
AG+L GGALLVYNTSAL+
Sbjct: 110 AGILGGGALLVYNTSALS 127
>gi|148279894|gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]
Length = 106
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%), Gaps = 14/108 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS LSLKP PFT+EKS+ +GLPS+++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-LSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGG 96
GLDASGRK KGKGVYQFVDKYGANVDGYS GDVY GG
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDVYAGG 106
>gi|34393640|dbj|BAC83336.1| putative Photosystem II 10 kDa polypeptide, chloroplast precursor
[Oryza sativa Japonica Group]
Length = 134
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 94/132 (71%), Gaps = 14/132 (10%)
Query: 8 SSLSLKPAPFT-VEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDA 64
+S +LKP+P +E++ R + PS + F+++AK K I+T +P+G GG +L++G+DA
Sbjct: 2 ASCALKPSPSPFLEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPNLKDGVDA 61
Query: 65 SGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAG 113
SGR KGKGVYQF KYGANVDGY SGDVYTGG TGL +WAVTL+G+L
Sbjct: 62 SGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDVYTGGKTGLLLWAVTLSGILLA 121
Query: 114 GALLVYNTSALA 125
GALLVYNTSALA
Sbjct: 122 GALLVYNTSALA 133
>gi|357111680|ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II 10 kDa polypeptide,
chloroplastic-like [Brachypodium distachyon]
Length = 138
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 91/138 (65%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDL 58
M+ SVMAS L+LKP+ P PS+ F + K K++T +PYG +G +
Sbjct: 1 MSDSVMAS-LALKPSSSPLLERSKLQARXPSVRPPLFIVAKKAKKVQTSQPYGPSGEVVF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTL 107
+EG+DASGR AKGKGVYQF +KYGANVDGY SGDVY GG TGL +WAVTL
Sbjct: 60 KEGVDASGRVAKGKGVYQFSNKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTL 119
Query: 108 AGLLAGGALLVYNTSALA 125
G+L GGALLVY+TSALA
Sbjct: 120 TGILLGGALLVYSTSALA 137
>gi|357451411|ref|XP_003595982.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485030|gb|AES66233.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 127
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 81/108 (75%), Gaps = 14/108 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGG 96
+G DASGRK KGKGVYQFVDKYGANVDGYS GDVYTGG
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGG 106
>gi|283101070|gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|351066200|gb|AEQ39074.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 94/128 (73%), Gaps = 15/128 (11%)
Query: 13 KPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMDLREGLDASGRKA 69
KP+P + +S +GLPSLA+ + + K G KIKTD P+G GGM L++GLDASGRK
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKLKDGLDASGRKG 70
Query: 70 KGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGALLV 118
KGKGVYQFVDKYGANVDGY SGDVY GG TGL IWA TLAGLLAGGALLV
Sbjct: 71 KGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAGGALLV 130
Query: 119 YNTSALAQ 126
YNTSALAQ
Sbjct: 131 YNTSALAQ 138
>gi|104763664|gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
Length = 144
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 99/138 (71%), Gaps = 14/138 (10%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGG---KIKTDKPYGVNGGMDLR 59
A+VM+S +PF + A+ LPSLA++S + + KI+T PYG+NGG+ L+
Sbjct: 7 ATVMSSFFVRPSSPFLERSAQAKALPSLARSSSSLRVEASAKKKIQTATPYGINGGLSLK 66
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLA 108
+G DASGRKAKGKGVYQFVDKYGANVDGY SGDVY GG TGL IWA+TLA
Sbjct: 67 DGADASGRKAKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLA 126
Query: 109 GLLAGGALLVYNTSALAQ 126
GLLAGGALLVYNTSALAQ
Sbjct: 127 GLLAGGALLVYNTSALAQ 144
>gi|116778776|gb|ABK20990.1| unknown [Picea sitchensis]
gi|116780441|gb|ABK21682.1| unknown [Picea sitchensis]
gi|116782098|gb|ABK22369.1| unknown [Picea sitchensis]
gi|116784501|gb|ABK23366.1| unknown [Picea sitchensis]
gi|116789036|gb|ABK25094.1| unknown [Picea sitchensis]
gi|116790690|gb|ABK25703.1| unknown [Picea sitchensis]
gi|224285151|gb|ACN40303.1| unknown [Picea sitchensis]
Length = 150
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 75/110 (68%), Gaps = 12/110 (10%)
Query: 28 PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVD 86
P + S K+VA GGK IK D+P G +G + R G+DA GRK KGKGVYQF KYGANVD
Sbjct: 40 PPTSSRSVKVVASGGKKIKVDEPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVD 99
Query: 87 GYS-----------GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
GYS GDVY GG TGL IWA+T A +L GGALLVYNTSAL+
Sbjct: 100 GYSPIYDTKDWSPTGDVYVGGKTGLLIWAITFAAILGGGALLVYNTSALS 149
>gi|125560490|gb|EAZ05938.1| hypothetical protein OsI_28175 [Oryza sativa Indica Group]
Length = 130
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 96/134 (71%), Gaps = 19/134 (14%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSPL---VAPARAKGLPSISRRGSSFAIVCTGGKKIKTDKPYGIGGGMSVD--I 55
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLL 111
DASGRK+ GKGVYQFVDKYGANVDGYS GD Y GG TGL IWAVTLAGLL
Sbjct: 56 DASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLL 115
Query: 112 AGGALLVYNTSALA 125
GGALLVYNTSALA
Sbjct: 116 GGGALLVYNTSALA 129
>gi|115475227|ref|NP_001061210.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|38636958|dbj|BAD03219.1| putative photosystem II 10K protein [Oryza sativa Japonica Group]
gi|113623179|dbj|BAF23124.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|215740428|dbj|BAG97084.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768077|dbj|BAH00306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 130
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 96/134 (71%), Gaps = 19/134 (14%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSPL---VAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--I 55
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLL 111
DASGRK+ GKGVYQFVDKYGANVDGYS GD Y GG TGL IWAVTLAGLL
Sbjct: 56 DASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLL 115
Query: 112 AGGALLVYNTSALA 125
GGALLVYNTSALA
Sbjct: 116 GGGALLVYNTSALA 129
>gi|357451413|ref|XP_003595983.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485031|gb|AES66234.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 88
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 73/89 (82%), Gaps = 3/89 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSRP-FKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY 88
+G DASGRK KGKGVYQFVDKYGANVDGY
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGY 87
>gi|83317160|gb|ABC02754.1| PS II 10 kDa protein [Phyllostachys edulis]
Length = 130
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 97/134 (72%), Gaps = 19/134 (14%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P + + A+G+PSL++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSP---LLAPTRAKGMPSLSRRGSSFAIVCGGGKKIKTDKPYGIGGGMTVD--V 55
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLL 111
DA+GRK KGKGVYQFVDKYGANVDGYS GDVY GG TGL IWA+TLAGLL
Sbjct: 56 DANGRKGKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLAGLL 115
Query: 112 AGGALLVYNTSALA 125
GGALLVYNTSALA
Sbjct: 116 GGGALLVYNTSALA 129
>gi|8698891|gb|AAF78511.1|AF195209_1 polypeptide precursor of photosystem II [Pyrus pyrifolia]
Length = 82
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%), Gaps = 3/82 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM SS+SLKP+PFTV+K A RGLPSL+++S FK+ A GGK I+T PYG+NGGMD
Sbjct: 1 MAASVMTSSVSLKPSPFTVDKPAVRGLPSLSRSSASFKVQASGGKKIRTATPYGINGGMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVD 79
LR+G+DASGRK KGKGVYQFVD
Sbjct: 61 LRDGVDASGRKGKGKGVYQFVD 82
>gi|99014566|emb|CAK22270.1| Photosystem II 10 kDa polypeptide, chloroplast precursor
[Chenopodium rubrum]
Length = 121
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 96/141 (68%), Gaps = 35/141 (24%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGM 56
MAASV+ SSLSLKP+ F V+ K+A +GLPSL++ TSF + A GGK IKTDKP
Sbjct: 1 MAASVVMSSLSLKPSSFNVDTKAAVKGLPSLSRSSTSFTVRASGGKKIKTDKP------- 53
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAV 105
GKGVYQFVDKYGANVDGYS GDVYTGG TGL IWAV
Sbjct: 54 -------------SGKGVYQFVDKYGANVDGYSPIYNEEEWSPSGDVYTGGTTGLLIWAV 100
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAGLLAGGALLVYNTSALAQ
Sbjct: 101 TLAGLLAGGALLVYNTSALAQ 121
>gi|1835731|gb|AAB46718.1| photosystem II 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 126
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 90/121 (74%), Gaps = 16/121 (13%)
Query: 19 VEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVY 75
V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +DASGRK+ GKGVY
Sbjct: 7 VAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVY 64
Query: 76 QFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSAL 124
QFVDKYGANVDGYS GD Y GG TGL IWAVTLAGLL GGALLVYNTSAL
Sbjct: 65 QFVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSAL 124
Query: 125 A 125
A
Sbjct: 125 A 125
>gi|302780972|ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
gi|300159727|gb|EFJ26346.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
Length = 135
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 78/116 (67%), Gaps = 13/116 (11%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKY 81
AARGLP+L+ T + A+GGK I T P G +G + + GLDASGR KGKGVYQF KY
Sbjct: 21 AARGLPALS-TRLTVTARGGKKISTKAPLGPSGDLSFKSGLDASGRGTKGKGVYQFTKKY 79
Query: 82 GANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALAQ 126
GANVDGY SGDVYTGG TGL +WA+TL G+L G LVY+TSALA
Sbjct: 80 GANVDGYSPIYTPDEWSPSGDVYTGGQTGLLLWAITLGGVLLAGVFLVYSTSALAS 135
>gi|242078467|ref|XP_002444002.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
gi|241940352|gb|EES13497.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
Length = 132
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 99/139 (71%), Gaps = 22/139 (15%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVA-KGGKIKTDKPYGVNGGMD 57
MAAS+++SS + P S A+GLPSL + +SF +V G KIKTDKP+G+ GG+
Sbjct: 1 MAASMISSSALVAPP------SRAQGLPSLGRRASSFAVVCGTGKKIKTDKPFGIGGGLT 54
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
+ + DASGRK KGKGVYQFVDKYGANVDGYS G+VY GG TGL IWA+T
Sbjct: 55 VDK--DASGRKVKGKGVYQFVDKYGANVDGYSPIYNENEWSPSGNVYVGGTTGLLIWAIT 112
Query: 107 LAGLLAGGALLVYNTSALA 125
LAGLL GGALLVYNTSAL+
Sbjct: 113 LAGLLGGGALLVYNTSALS 131
>gi|119720770|gb|ABL97955.1| chloroplast photosystem II 10 kDa polypeptide precursor [Brassica
rapa]
Length = 82
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 67/82 (81%), Gaps = 11/82 (13%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWA 104
MDLR+G+DASGRK KG GVY+FVDKYGANVDGYS GDVY GG TGLAIWA
Sbjct: 1 MDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSPGGDVYKGGVTGLAIWA 60
Query: 105 VTLAGLLAGGALLVYNTSALAQ 126
VTLAG+LAGGALLVYNTSALAQ
Sbjct: 61 VTLAGILAGGALLVYNTSALAQ 82
>gi|302804845|ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
gi|300148023|gb|EFJ14684.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
Length = 135
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 77/116 (66%), Gaps = 13/116 (11%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKY 81
AARGLP+L+ + A GGK I T P G +G + + G+DASGR AKGKGVYQF KY
Sbjct: 21 AARGLPALS-IRLTVTASGGKKISTKTPLGPSGDLTFKSGVDASGRGAKGKGVYQFTKKY 79
Query: 82 GANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALAQ 126
GANVDGY SGDVY+GG TGL +WA+TL G+L G LVY+TSALA
Sbjct: 80 GANVDGYSPIYTPDEWSPSGDVYSGGQTGLLLWAITLGGVLLAGVFLVYSTSALAS 135
>gi|149391015|gb|ABR25525.1| photosystem ii 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 128
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 79/105 (75%), Gaps = 14/105 (13%)
Query: 33 TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-- 89
+SF IV GGK IKTDKPYG+ GGM + +DASGRK+ GKGVYQFVDKYGANVDGYS
Sbjct: 25 SSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVYQFVDKYGANVDGYSPI 82
Query: 90 ---------GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
GD Y GG TGL IWAVTLAGLL GGALLVYNTSALA
Sbjct: 83 YSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 127
>gi|222640075|gb|EEE68207.1| hypothetical protein OsJ_26372 [Oryza sativa Japonica Group]
Length = 149
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 73/96 (76%), Gaps = 13/96 (13%)
Query: 41 GGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS----------- 89
G KIKTDKPYG+ GGM + +DASGRK+ GKGVYQFVDKYGANVDGYS
Sbjct: 55 GKKIKTDKPYGIGGGMSV--DIDASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPT 112
Query: 90 GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
GD Y GG TGL IWAVTLAGLL GGALLVYNTSALA
Sbjct: 113 GDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 148
>gi|357145089|ref|XP_003573520.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357145092|ref|XP_003573521.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357145094|ref|XP_003573522.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 127
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 91/139 (65%), Gaps = 27/139 (19%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS++ S L A LPSL++ ++F +V GGK IK DKP G+ GG+
Sbjct: 1 MAASMITSPLV-----------APTSLPSLSRRGSNFAVVCSGGKKIKVDKPLGIGGGLT 49
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
+ +DA+GRK GKGVYQFVDKYGANVDGYS GD Y GG TGL IWAVT
Sbjct: 50 VD--IDANGRKGTGKGVYQFVDKYGANVDGYSPIYTPEVWSESGDRYAGGTTGLLIWAVT 107
Query: 107 LAGLLAGGALLVYNTSALA 125
LAGLL GGALLVYNTSALA
Sbjct: 108 LAGLLGGGALLVYNTSALA 126
>gi|227204419|dbj|BAH57061.1| AT1G79040 [Arabidopsis thaliana]
Length = 77
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAK 70
LR+G+DASGRK K
Sbjct: 61 LRDGVDASGRKGK 73
>gi|155733519|gb|ABU39902.1| photosystem II 10 kDa polypeptide [Olea europaea]
Length = 74
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 59/74 (79%), Gaps = 11/74 (14%)
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+GLDASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 1 LRDGLDASGRKGKGKGVYQYVDKYGANVDGYSPIFNTDDWSPSGDVYVGGTTGLAIWAVT 60
Query: 107 LAGLLAGGALLVYN 120
L G+LAGGALLVY+
Sbjct: 61 LVGILAGGALLVYS 74
>gi|183013704|gb|ACC38381.1| photosystem II PsbR protein [Lilium formosanum]
Length = 78
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 57/76 (75%), Gaps = 11/76 (14%)
Query: 54 GGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAI 102
GGM L GLDASGRKAKGKGVYQFVDKYGANVDGYS GDVY GG TGL I
Sbjct: 3 GGMSLENGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYTPEEWSEGGDVYVGGTTGLLI 62
Query: 103 WAVTLAGLLAGGALLV 118
WAVTL G+L GGALLV
Sbjct: 63 WAVTLVGILGGGALLV 78
>gi|326495290|dbj|BAJ85741.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510039|dbj|BAJ87236.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 127
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 90/139 (64%), Gaps = 27/139 (19%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS++ S + A LPSL++ +SF +V GGK IK DKP G+ GG+
Sbjct: 1 MAASMITSPIV-----------APTSLPSLSRRGSSFAVVCSGGKKIKVDKPLGLGGGLT 49
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVT 106
+ +DA+GRK KGVYQFVDKYGANVDGYS GD Y GG TGL IWAVT
Sbjct: 50 VD--IDANGRKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVT 107
Query: 107 LAGLLAGGALLVYNTSALA 125
LAGLL GGALLVYNTSALA
Sbjct: 108 LAGLLGGGALLVYNTSALA 126
>gi|37783281|gb|AAP72269.1| photosystem II polypeptide [Triticum aestivum]
Length = 99
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 68/96 (70%), Gaps = 13/96 (13%)
Query: 41 GGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS----------- 89
G KIK DKP G+ GG+ + +DA+GRK KGVYQFVDKYGANVDGYS
Sbjct: 5 GKKIKVDKPLGLGGGLTVD--IDANGRKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSES 62
Query: 90 GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
GD Y GG TGL IWAVTLAGLL GG LLVYNTSALA
Sbjct: 63 GDRYAGGTTGLLIWAVTLAGLLGGGVLLVYNTSALA 98
>gi|168004549|ref|XP_001754974.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694078|gb|EDQ80428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 79/131 (60%), Gaps = 20/131 (15%)
Query: 15 APFTVEKS-----AARGLPSL----AKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDAS 65
AP +E+S A +G+P+L + + A K+K +P G +G ++G+DA
Sbjct: 16 APSAMERSSFSGAAVQGVPALRVSRSARPLSVTASTKKLKVAQPLGPSGDFKNKKGVDAG 75
Query: 66 GRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLLAGG 114
GR KGKGVYQFVDKYGANVDGYS GD Y GG LAIWA+ L GLL G
Sbjct: 76 GRVLKGKGVYQFVDKYGANVDGYSPIYAREEWSAGGDSYAGGTPALAIWALLLGGLLVTG 135
Query: 115 ALLVYNTSALA 125
ALLVYNTSAL+
Sbjct: 136 ALLVYNTSALS 146
>gi|168019742|ref|XP_001762403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686481|gb|EDQ72870.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 75/119 (63%), Gaps = 15/119 (12%)
Query: 22 SAARGLP----SLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQF 77
+A +GLP +LA + A KIK +P G +G ++G+DA GR KGKGVYQF
Sbjct: 28 AAVQGLPALKMNLAARPLTVTASTKKIKVAQPLGPSGDFKSKKGVDAGGRVLKGKGVYQF 87
Query: 78 VDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
VDKYGANVDGY SGD Y GG LAIWA+ L GLL GGALLVYNTSAL+
Sbjct: 88 VDKYGANVDGYSPIYAKEEWSKSGDSYAGGTPALAIWALLLGGLLVGGALLVYNTSALS 146
>gi|168015305|ref|XP_001760191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688571|gb|EDQ74947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 137
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 73/117 (62%), Gaps = 17/117 (14%)
Query: 26 GLPSLAKTS------FKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVD 79
GLP+L+ T+ + A KIK +P G +G ++G+DA GR KGKGVYQFVD
Sbjct: 20 GLPTLSTTTPRTARPLTVTANVKKIKVKEPLGPSGDFKNKKGVDAGGRVLKGKGVYQFVD 79
Query: 80 KYGANVDGYS-----------GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
KYGANVDGYS GD Y GG LAIWA+ L GLL GALLVYNTSAL+
Sbjct: 80 KYGANVDGYSPIYAKDEWSKGGDSYAGGTPALAIWALLLGGLLLTGALLVYNTSALS 136
>gi|168019568|ref|XP_001762316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686394|gb|EDQ72783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 73/110 (66%), Gaps = 14/110 (12%)
Query: 29 SLAKTSFKIV--AKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVD 86
SL++TS ++ A KIK +P G +G + ++G+DA GR KGKGVYQFVDKYGANVD
Sbjct: 37 SLSRTSRSLIVTASTKKIKVSQPLGPSGDLK-KKGVDAGGRVLKGKGVYQFVDKYGANVD 95
Query: 87 GYS-----------GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 125
GYS GD Y GG LAIWA+ L GLL GALLVYNTSAL+
Sbjct: 96 GYSPIYARDEWSQGGDSYAGGTPALAIWALLLGGLLLTGALLVYNTSALS 145
>gi|224284194|gb|ACN39833.1| unknown [Picea sitchensis]
Length = 133
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Query: 28 PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVD 86
P + S K+VA GGK IK D+P G +G + R G+DA GRK KGKGVYQF KYGANVD
Sbjct: 40 PPTSSRSVKVVASGGKKIKVDEPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVD 99
Query: 87 GYS-----------GDVYTGGATGLAIWAVTL 107
GYS GDVY GG + + + L
Sbjct: 100 GYSPIYDTKDWSPTGDVYVGGTVNMILLVLIL 131
>gi|384254288|gb|EIE27762.1| photosystem II protein PsbR, partial [Coccomyxa subellipsoidea
C-169]
Length = 109
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Query: 51 GVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATG 99
G++ M + D+ GRK KG GVY+F KYGANVDGYS GD Y+ G G
Sbjct: 23 GISRKMSDKNWTDSQGRKGKGFGVYRFASKYGANVDGYSPIYTPDVWAETGDSYSLGTKG 82
Query: 100 LAIWAVTLAGLLAGGALLVYNTSALAQ 126
L WA + LLA GA L+Y+TS L Q
Sbjct: 83 LLAWAGLVTVLLAVGATLIYSTSQLGQ 109
>gi|338746114|emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium chlorophorum]
Length = 193
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 7 ASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKT-----------DKPYGVNGG 55
A+S+ +P + R +P+ + KGGK+ T + GV+
Sbjct: 53 ATSMIAEPMQLARQAMPTRAMPNTRQLVIVEGGKGGKVNTGLSSVEDVVVKNNLEGVSRF 112
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWA 104
M+ + +D+ GRK KG GVY+F KYG N+DGYS GD ++ G GL WA
Sbjct: 113 MNKKGWVDSQGRKGKGFGVYRFASKYGTNIDGYSPIYRPDDWSETGDTFSLGTKGLIAWA 172
Query: 105 VTLAGLLAGGALLVYNTSALA 125
+ LL G L+ TS L+
Sbjct: 173 GLIVVLLGVGGTLIVQTSQLS 193
>gi|307107577|gb|EFN55819.1| hypothetical protein CHLNCDRAFT_35273 [Chlorella variabilis]
Length = 144
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWA 104
M+ + +D GRK KG GVY+F +KYGANVDGY SGD Y G GL WA
Sbjct: 63 MESKGWVDPQGRKGKGYGVYRFANKYGANVDGYSPIYTPDTWSESGDSYKLGTKGLLAWA 122
Query: 105 VTLAGLLAGGALLVYNTSALAQ 126
+ LL G LV +TSA+ Q
Sbjct: 123 GLIVVLLGVGVNLVVSTSAIGQ 144
>gi|326500542|dbj|BAK06360.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 83
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 51 GVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGY 88
G GG+ +EG+DASGR AKGKGVYQF DKYGANVDGY
Sbjct: 45 GPGGGVAFKEGVDASGRVAKGKGVYQFADKYGANVDGY 82
>gi|324331732|gb|ADY38661.1| putative chloroplast photosystem II protein PsbR [Wolffia
arrhiza]
Length = 79
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Query: 13 KPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMDLREGLDASGRKA 69
KP+P + +S +GLPSLA+ + + K G KIKTD P+G GG +L++GLDASGRK
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGTELKDGLDASGRKG 70
Query: 70 KG 71
KG
Sbjct: 71 KG 72
>gi|32307614|gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans]
Length = 197
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 57/124 (45%), Gaps = 21/124 (16%)
Query: 22 SAARGLPSLAKTSFK-----IVAKGGKIKTDKPYGVN-----GGMDLREGLDASGRKAKG 71
S R PS +FK I KG + +D+ N M + +D GRK +G
Sbjct: 74 SRTRAAPSRTAVNFKVKQVDIKKKGLESISDETIQQNLQGRSRAMSDKNWVDPQGRKGRG 133
Query: 72 KGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVTLAGLLAGGALLVYN 120
GVY+F KYGANVDGY SG+ Y G L W V + LL GA L+ +
Sbjct: 134 YGVYRFQKKYGANVDGYSPIYTPDIWSESGNSYKLGTNALIAWLVLVVTLLGIGANLIIS 193
Query: 121 TSAL 124
TS L
Sbjct: 194 TSQL 197
>gi|193875820|gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata]
Length = 165
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 51 GVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATG 99
G + M+ + +D+ GRK KG GVY+F KYGANVDGY SG+ Y G
Sbjct: 81 GRSRAMENKGWVDSQGRKGKGLGVYRFEKKYGANVDGYSPIYTPDIWAESGNSYKLGTNA 140
Query: 100 LAIWAVTLAGLLAGGALLVYNTSAL 124
L WA + LLA GA L+ +TS L
Sbjct: 141 LIAWAGLVVVLLAIGANLIISTSQL 165
>gi|159476978|ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
gi|158282813|gb|EDP08565.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
Length = 121
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWA 104
M+ ++ DASGRK KG GVY++ DKYGANVDGY SGD YT G GL WA
Sbjct: 40 MNKKDWKDASGRKGKGYGVYRYEDKYGANVDGYSPIYTPDLWTESGDSYTLGTKGLIAWA 99
Query: 105 VTLAGLLAGGALLVYNTSAL 124
+ LLA G L+ +TS L
Sbjct: 100 GLVLVLLAVGVNLIISTSQL 119
>gi|302828496|ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
gi|300268630|gb|EFJ52810.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
Length = 141
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWA 104
M+ +E D+SGRK KG GVY++ DKYGANVDGY SGD Y G GL WA
Sbjct: 60 MNNKEWKDSSGRKGKGYGVYRYADKYGANVDGYSPIYTPDLWTESGDSYKLGTKGLIAWA 119
Query: 105 VTLAGLLAGGALLVYNTSAL 124
+ LLA G L+ +TS L
Sbjct: 120 GLVLVLLAVGVNLIISTSQL 139
>gi|6440817|dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 128
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 27 LPSLAKTSFKIVAKGG-KIKT--------DKPY------GVNGGMDLREGLDASGRKAKG 71
LP+ + S K VA GG K+ D P G + M + +D GRK KG
Sbjct: 3 LPARVRKSLKPVASGGGKVDITKAGLEGIDDPTVQQNLKGRSRYMKDKNWVDPQGRKGKG 62
Query: 72 KGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWA 104
GVY+F DKYGANVDGY SG Y G GL WA
Sbjct: 63 YGVYRFEDKYGANVDGYSPIYTADQWTESGASYKLGTKGLIAWA 106
>gi|87313201|gb|ABD37897.1| photosystem II PsbR protein [Mesostigma viride]
Length = 137
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDK---PYGVNG-GM 56
++ASVM SS A + K A S+ K S VA GG K +K P + G +
Sbjct: 6 VSASVMTSSF----AGVKLAKVNAAPRQSVVKASPMTVASGGPKKLNKLKGPAELMGYKL 61
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAV 105
+ G + K VY+ G NVD YS GD Y GG GLAIWAV
Sbjct: 62 STQAGSAPPTKDGKPGKVYKL---SGQNVDEYSPIYTPEQWASNGDTYAGGVLGLAIWAV 118
Query: 106 TLAGLLAGGALLVYNTSAL 124
G+L A + +TS+L
Sbjct: 119 LFLGVLGFSAFAILSTSSL 137
>gi|90020009|ref|YP_525836.1| N-acetylglutamate synthase [Saccharophagus degradans 2-40]
gi|89949609|gb|ABD79624.1| N-acetylglutamate synthase [Saccharophagus degradans 2-40]
Length = 439
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 17 FTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQ 76
FT+E + + GLP+ KI +GG T P GV G+D L R KGV +
Sbjct: 105 FTLEANLSSGLPNSPMHGSKIRIRGGNFITAMPQGVIDGID--HHLTGKVRSVDTKGVRE 162
Query: 77 FVDKYGANVDGYSGDVYTGGATGLAIW--AVTLAGLLAGGALLVYN 120
+D+ + G+ +TG L+ A+ +A + L+ YN
Sbjct: 163 QLDEGSITLVSPLGNSFTGEVFNLSFADVAIHIATAIQADKLIAYN 208
>gi|383162988|gb|AFG64195.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162990|gb|AFG64196.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162992|gb|AFG64197.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162994|gb|AFG64198.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162996|gb|AFG64199.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162998|gb|AFG64200.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163000|gb|AFG64201.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163002|gb|AFG64202.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163004|gb|AFG64203.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163006|gb|AFG64204.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163008|gb|AFG64205.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163012|gb|AFG64207.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163014|gb|AFG64208.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163016|gb|AFG64209.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163018|gb|AFG64210.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163020|gb|AFG64211.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163022|gb|AFG64212.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 68
P + S K+VA G KIK D+P G +G + R G+DA GRK
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRNGVDAGGRK 84
>gi|383163010|gb|AFG64206.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 68
P + S K+VA G KIK D+P G +G + R G+DA GRK
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRNGVDAGGRK 84
>gi|361069671|gb|AEW09147.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 68
P + S K+VA G KIK D+P G +G + R G+DA GRK
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRSGVDAGGRK 84
>gi|412988828|emb|CCO15419.1| predicted protein [Bathycoccus prasinos]
Length = 177
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 14/53 (26%)
Query: 83 ANVDGYS-----------GDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSAL 124
ANVD YS GD Y G L WA TLAG++ GAL +Y TSAL
Sbjct: 128 ANVDEYSPIYSPEEFKTDGDKYEGN---LLYWAATLAGIIGSGALAIYLTSAL 177
>gi|433771490|ref|YP_007301957.1| putative methyltransferase (contains TPR repeat) [Mesorhizobium
australicum WSM2073]
gi|433663505|gb|AGB42581.1| putative methyltransferase (contains TPR repeat) [Mesorhizobium
australicum WSM2073]
Length = 306
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 56 MDLREGLDASGR---KAKGKGVYQFVDKYGANVDGYSGD-----------VYTGGATGLA 101
+D EG D S R KA+ KG+Y + K YSGD +Y GG GL
Sbjct: 165 VDRLEGFDISARMLKKARAKGIYDALTKADLQDFSYSGDRADLVTSADVLIYIGGLEGL- 223
Query: 102 IWAVTLAGLLAGGALLVYNTSALAQ 126
+AGLLA G L ++ +LA+
Sbjct: 224 --VGVVAGLLADGGLFAFSVESLAE 246
>gi|254784609|ref|YP_003072037.1| N-acetylglutamate synthase [Teredinibacter turnerae T7901]
gi|237684367|gb|ACR11631.1| amino-acid N-acetyltransferase [Teredinibacter turnerae T7901]
Length = 441
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 15 APFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGV 74
A FT+E + + GLP KI + G T P GV G+D + L R G+
Sbjct: 103 ARFTIEAAFSSGLPDSPMYGSKIRVRCGNFVTAMPQGVIDGIDHQ--LTGKVRSVDASGI 160
Query: 75 YQFVDKYGANVDGYSGDVYTGGATGLAIW--AVTLAGLLAGGALLVYN 120
+D+ + G TG A L+ A+ +A L L+ YN
Sbjct: 161 RAMLDQNSLALVSPLGYSLTGEAFNLSFADVAIAIANALRADKLIAYN 208
>gi|145346793|ref|XP_001417867.1| psbR, PSII-R, photosystem II polypeptide [Ostreococcus lucimarinus
CCE9901]
gi|144578095|gb|ABO96160.1| psbR, PSII-R, photosystem II polypeptide [Ostreococcus lucimarinus
CCE9901]
Length = 101
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 67 RKAKGKGVYQFVDKYG-ANVDGYS-----------GDVYTGGATGLAIWAVTLAGLLAGG 114
R K VY+ + G ANVD YS GD Y G L WA TLAG++ G
Sbjct: 35 RSGKAGYVYKLGLRNGKANVDEYSPIWVPQDFKSDGDKYEGN---LVYWAATLAGIIGTG 91
Query: 115 ALLVYNTSAL 124
AL +Y TSAL
Sbjct: 92 ALAIYLTSAL 101
>gi|394989134|ref|ZP_10381968.1| hypothetical protein SCD_01552 [Sulfuricella denitrificans skB26]
gi|393791553|dbj|GAB71607.1| hypothetical protein SCD_01552 [Sulfuricella denitrificans skB26]
Length = 258
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 40 KGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYG--ANVDGYSGDVYTGGA 97
+ G++ KPY + G +D R+G + GR + Y+F+ YG A G+ V G
Sbjct: 125 RNGEVDEFKPYKIRGVLDKRDGFEEKGRGER----YKFLSTYGTHATFKGFELVVTEKGL 180
Query: 98 T-GLAIWAVTLAGLLAGGAL 116
T G + L G+L GAL
Sbjct: 181 TIGPFMSEKLLTGILNDGAL 200
>gi|337264611|ref|YP_004608666.1| type 12 methyltransferase [Mesorhizobium opportunistum WSM2075]
gi|336024921|gb|AEH84572.1| Methyltransferase type 12 [Mesorhizobium opportunistum WSM2075]
Length = 305
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 56 MDLREGLDASG---RKAKGKGVYQFVDKYGANVDGYSGD-----------VYTGGATGLA 101
+D EG D S RKA+ KG+Y + K YSGD +Y G L
Sbjct: 165 VDRLEGFDISAAMLRKARAKGIYDALVKADLQGFSYSGDKADLVTSADVLIYVGRLEALV 224
Query: 102 IWAVTLAGLLAGGALLVYNTSALAQ 126
T+AGLLAGG L ++ +A+
Sbjct: 225 ---ETVAGLLAGGGLFAFSVETMAE 246
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,042,936,401
Number of Sequences: 23463169
Number of extensions: 89621408
Number of successful extensions: 204383
Number of sequences better than 100.0: 120
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 204130
Number of HSP's gapped (non-prelim): 125
length of query: 126
length of database: 8,064,228,071
effective HSP length: 92
effective length of query: 34
effective length of database: 10,200,583,819
effective search space: 346819849846
effective search space used: 346819849846
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)