BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033164
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis
thaliana GN=PSBR PE=1 SV=1
Length = 140
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 116/140 (82%), Gaps = 14/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KG GVY++VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 107 LAGLLAGGALLVYNTSALAQ 126
LAG+LAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica
campestris GN=PSBR PE=2 SV=1
Length = 141
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 115/141 (81%), Gaps = 15/141 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAV 105
DLR+G+DASGRK KG GVY+FVDKYGANVDGY SGDVY GG TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAG+LAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana
tabacum GN=PSBR PE=2 SV=1
Length = 136
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 112/140 (80%), Gaps = 18/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KGKGVYQFVDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVT 116
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLV+NTSALAQ
Sbjct: 117 LVGILAGGALLVFNTSALAQ 136
>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum
tuberosum GN=PSBR PE=2 SV=1
Length = 138
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 114/140 (81%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LVGILAGGALLVYNTSALAQ 138
>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum
lycopersicum GN=PSBR PE=2 SV=1
Length = 138
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 112/140 (80%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGY SGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 107 LAGLLAGGALLVYNTSALAQ 126
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LLGILAGGALLVYNTSALAQ 138
>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia
oleracea GN=PSBR PE=2 SV=1
Length = 140
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/141 (68%), Positives = 108/141 (76%), Gaps = 16/141 (11%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYS-----------GDVYTGGATGLAIWAV 105
LR+G+D+SGRK GKGVYQFVDKYGANVDGYS GDVY GG TGL IWAV
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAV 119
Query: 106 TLAGLLAGGALLVYNTSALAQ 126
TLAGLLAGGALLVYNTSALAQ
Sbjct: 120 TLAGLLAGGALLVYNTSALAQ 140
>sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloroplastic OS=Hordeum vulgare
GN=PSBR PE=3 SV=1
Length = 138
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 99/139 (71%), Gaps = 16/139 (11%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGY-----------SGDVYTGGATGLAIWAVT 106
+EG+DASGR AKGKGVYQF DKYGANVDGY SGDVY GG TGL +WAVT
Sbjct: 59 FKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVT 118
Query: 107 LAGLLAGGALLVYNTSALA 125
LAG+L GGALLVY+TSALA
Sbjct: 119 LAGILLGGALLVYSTSALA 137
>sp|Q9CAU0|SCP6_ARATH Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6
PE=2 SV=2
Length = 452
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G E +
Sbjct: 92 SGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPS 151
Query: 67 RKAKGKGVYQFVDKY-GANVDGYSGDVYTGG 96
+ K +++F+ K+ G + + S Y GG
Sbjct: 152 DTGEAKRIHEFLQKWLGKHQEFSSNPFYVGG 182
>sp|Q9CAU3|SCP2_ARATH Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2
PE=2 SV=1
Length = 441
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDK-------YGANVDGYSGDVYTG 95
+ K +++F+ K + +N +GD Y+G
Sbjct: 152 DSGEAKRIHEFLQKWLGKHQEFSSNPFYVAGDSYSG 187
>sp|Q9CAU1|SCP3_ARATH Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3
PE=2 SV=1
Length = 441
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + L+
Sbjct: 92 SGLLFENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPS 151
Query: 67 RKAKGKGVYQFVDKY-GANVDGYSGDVYTGG 96
+ K +++F+ K+ G + + S Y GG
Sbjct: 152 DSGEAKRIHEFLQKWLGKHQEFSSNPFYVGG 182
>sp|A8GJ50|MLTC_SERP5 Membrane-bound lytic murein transglycosylase C OS=Serratia
proteamaculans (strain 568) GN=mltC PE=3 SV=1
Length = 358
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 9 SLSLKPAPFTVEKSAARGLPSLAKTSFK-------IVAKGGKIKTDKPYGVNGGMDLREG 61
S++++ P ++K A + LP + K S K I+A + PY V+G L G
Sbjct: 174 SVTIQLVPNHLDKRAHKYLPMVRKASEKYGVEESLILAIMQTESSFNPYAVSGSDAL--G 231
Query: 62 LDASGRKAKGKGVYQFVDKYGANVDGYSGDVYTGGATGLAIWAVTLAGLLAG 113
L + GK V+Q K+G Y D TG A A+ L G
Sbjct: 232 LMQVVQHTAGKDVFQMRGKWGKPSRSYLFDPENNIDTGTAYLAILQNNYLGG 283
>sp|Q8RWJ6|SCP1_ARATH Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1
PE=2 SV=1
Length = 441
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDK-------YGANVDGYSGDVYTG 95
+ K +++F+ K + +N +GD Y+G
Sbjct: 152 DSGEAKRIHEFLQKWLGKHQVFSSNPFYVAGDSYSG 187
>sp|A4IXU1|SYL_FRATW Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q5NG64|SYL_FRATT Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain SCHU S4 / Schu 4) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q0BLI7|SYL_FRATO Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain OSU18) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|B2SGM9|SYL_FRATM Leucine--tRNA ligase OS=Francisella tularensis subsp. mediasiatica
(strain FSC147) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q2A307|SYL_FRATH Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain LVS) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|A7NCQ3|SYL_FRATF Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain FTNF002-00 / FTA) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q14HL6|SYL_FRAT1 Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain FSC 198) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|A0Q693|SYL_FRATN Leucine--tRNA ligase OS=Francisella tularensis subsp. novicida
(strain U112) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +D+YGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDRYGAD 596
>sp|A1AV52|SYL_RUTMC Leucine--tRNA ligase OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=leuS PE=3 SV=1
Length = 816
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 36 KIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
K++ G IK D+P+ + GM L++G S K Q ++KYGA+
Sbjct: 545 KLLRDEGFIKNDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPAQMIEKYGAD 595
>sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18
PE=2 SV=2
Length = 464
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREG 61
A S+L+ + P T + G LPSL TS+ I D+P G
Sbjct: 83 ACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPL 142
Query: 62 LDASGRKAKGKGVYQFVDKYGA-NVDGYSGDVYTGG 96
+ K Y+F+ K+ N S +Y GG
Sbjct: 143 SYKPSDTGEAKQTYEFLQKWLVENPQFVSNPIYVGG 178
>sp|Q9CAU4|SCP4_ARATH Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4
PE=2 SV=1
Length = 441
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPS 151
Query: 67 RKAKGKGVYQFVDKY-GANVDGYSGDVYTGG 96
+ K +++F+ K+ G + + S Y GG
Sbjct: 152 DTGEAKRIHEFLQKWLGKHQEFSSNPFYVGG 182
>sp|B0U0E8|SYL_FRAP2 Leucine--tRNA ligase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=leuS PE=3 SV=1
Length = 813
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G + +D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVTSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDKYGAD 596
>sp|Q9CAU2|SCP5_ARATH Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5
PE=2 SV=2
Length = 438
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + +
Sbjct: 91 SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPS 150
Query: 67 RKAKGKGVYQFVDKYGANVDGYS-------GDVYTG 95
+ K +++F+ K+ + +S GD Y+G
Sbjct: 151 DSGEAKRIHEFLQKWLSKHQEFSSNPFYVAGDSYSG 186
>sp|Q9SQX6|SCP7_ARATH Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7
PE=2 SV=1
Length = 437
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P V+ G LPSL T++ I D+P G + ++
Sbjct: 88 SGLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPS 147
Query: 67 RKAKGKGVYQFVDKY-GANVDGYSGDVYTGGAT--GLAIWAV 105
+ K +++F+ K+ G + + S Y GG + G+ I A+
Sbjct: 148 DSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCGMVIPAL 189
>sp|Q1LSX7|RPOB_BAUCH DNA-directed RNA polymerase subunit beta OS=Baumannia
cicadellinicola subsp. Homalodisca coagulata GN=rpoB
PE=3 SV=1
Length = 1340
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 44 IKTDKPYGVNGGMDLREGLDAS-GRKAKGKGVYQFVDKYGANVDGYSGDVYTGGATGLAI 102
++TDKP V GM+ +D+ AK G+ Q+VD ++ +S ++Y+G A G+ I
Sbjct: 689 LRTDKPL-VGTGMERIVAVDSGVTVVAKRGGIVQYVDASRIVINVHSDEMYSGEA-GIDI 746
Query: 103 WAVT 106
+ +T
Sbjct: 747 YHMT 750
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,254,834
Number of Sequences: 539616
Number of extensions: 2131278
Number of successful extensions: 3841
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3816
Number of HSP's gapped (non-prelim): 40
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)