Your job contains 1 sequence.
>033167
MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ
HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGNKNIVHPPRKAD
ISINA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033167
(125 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015661 - symbol:AT1G16740 species:3702 "Arabi... 585 7.5e-57 1
DICTYBASE|DDB_G0273771 - symbol:DDB_G0273771 "50S ribosom... 337 1.4e-30 1
DICTYBASE|DDB_G0273295 - symbol:DDB_G0273295 "39S ribosom... 337 1.4e-30 1
TIGR_CMR|ECH_0197 - symbol:ECH_0197 "ribosomal protein L2... 335 2.3e-30 1
TIGR_CMR|NSE_0215 - symbol:NSE_0215 "ribosomal protein L2... 286 3.6e-25 1
TIGR_CMR|APH_0060 - symbol:APH_0060 "ribosomal protein L2... 272 1.1e-23 1
TIGR_CMR|BA_4817 - symbol:BA_4817 "ribosomal protein L20"... 264 7.8e-23 1
TIGR_CMR|CHY_1576 - symbol:CHY_1576 "ribosomal protein L2... 261 1.6e-22 1
TIGR_CMR|GSU_1518 - symbol:GSU_1518 "ribosomal protein L2... 253 1.1e-21 1
TIGR_CMR|SO_2302 - symbol:SO_2302 "ribosomal protein L20"... 249 3.0e-21 1
UNIPROTKB|P0A7L3 - symbol:rplT "50S ribosomal subunit pro... 245 8.0e-21 1
TIGR_CMR|SPO_3598 - symbol:SPO_3598 "ribosomal protein L2... 245 8.0e-21 1
TIGR_CMR|CJE_0295 - symbol:CJE_0295 "ribosomal protein L2... 243 1.3e-20 1
UNIPROTKB|P0A479 - symbol:rplT "50S ribosomal protein L20... 241 2.1e-20 1
TIGR_CMR|VC_A0290 - symbol:VC_A0290 "ribosomal protein L2... 241 2.1e-20 1
TIGR_CMR|CBU_1323 - symbol:CBU_1323 "ribosomal protein L2... 240 2.7e-20 1
TIGR_CMR|CPS_2906 - symbol:CPS_2906 "ribosomal protein L2... 240 2.7e-20 1
GENEDB_PFALCIPARUM|PF14_0709 - symbol:PF14_0709 "ribosoma... 237 5.7e-20 1
UNIPROTKB|Q8IK97 - symbol:PF14_0709 "Mitochondrial riboso... 237 5.7e-20 1
FB|FBgn0036335 - symbol:mRpL20 "mitochondrial ribosomal p... 230 3.1e-19 1
UNIPROTKB|P66105 - symbol:rplT "50S ribosomal protein L20... 226 8.3e-19 1
UNIPROTKB|E1BRV2 - symbol:MRPL20 "Uncharacterized protein... 225 1.1e-18 1
UNIPROTKB|F1RJD0 - symbol:MRPL20 "Uncharacterized protein... 224 1.4e-18 1
UNIPROTKB|Q2TBR2 - symbol:MRPL20 "39S ribosomal protein L... 220 3.6e-18 1
MGI|MGI:2137221 - symbol:Mrpl20 "mitochondrial ribosomal ... 218 5.8e-18 1
ZFIN|ZDB-GENE-030131-5299 - symbol:mrpl20 "mitochondrial ... 218 5.8e-18 1
RGD|1588219 - symbol:Mrpl20 "mitochondrial ribosomal prot... 215 1.2e-17 1
UNIPROTKB|E2QZ57 - symbol:MRPL20 "Uncharacterized protein... 214 1.6e-17 1
UNIPROTKB|Q9BYC9 - symbol:MRPL20 "39S ribosomal protein L... 208 6.7e-17 1
TIGR_CMR|DET_0750 - symbol:DET_0750 "ribosomal protein L2... 185 1.8e-14 1
UNIPROTKB|P0C448 - symbol:rpl20 "50S ribosomal protein L2... 176 1.6e-13 1
UNIPROTKB|Q6ENF0 - symbol:rpl20 "50S ribosomal protein L2... 176 1.6e-13 1
UNIPROTKB|P0C447 - symbol:rpl20 "50S ribosomal protein L2... 172 4.4e-13 1
UNIPROTKB|P12139 - symbol:rpl20 "50S ribosomal protein L2... 172 4.4e-13 1
UNIPROTKB|B7Z746 - symbol:MRPL20 "39S ribosomal protein L... 138 1.8e-09 1
UNIPROTKB|I3L2X1 - symbol:MRPL20 "39S ribosomal protein L... 102 1.1e-05 1
WB|WBGene00012992 - symbol:mrpl-20 species:6239 "Caenorha... 94 0.00015 1
>TAIR|locus:2015661 [details] [associations]
symbol:AT1G16740 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 HAMAP:MF_00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 OMA:MRTLWIS HSSP:O67086
UniGene:At.16104 EMBL:AY086501 EMBL:BT024573 IPI:IPI00540437
RefSeq:NP_173118.1 ProteinModelPortal:Q8LCN1 SMR:Q8LCN1
STRING:Q8LCN1 PaxDb:Q8LCN1 PRIDE:Q8LCN1 DNASU:838245
EnsemblPlants:AT1G16740.1 GeneID:838245 KEGG:ath:AT1G16740
TAIR:At1g16740 InParanoid:Q8LCN1 PhylomeDB:Q8LCN1
ProtClustDB:CLSN2679823 Genevestigator:Q8LCN1 Uniprot:Q8LCN1
Length = 126
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 112/126 (88%), Positives = 119/126 (94%)
Query: 1 MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60
MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKR+MR LWI+RINAG+RQ
Sbjct: 1 MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQ 60
Query: 61 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGNKNIVHPPRKAD 120
HGVNYGNF+HGLMKENIQLNRKVLSELSMHEPYSFKALVD+SR +FPGNKN+V RK D
Sbjct: 61 HGVNYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRKSFPGNKNVVQASRKVD 120
Query: 121 IS-INA 125
IS INA
Sbjct: 121 ISSINA 126
>DICTYBASE|DDB_G0273771 [details] [associations]
symbol:DDB_G0273771 "50S ribosomal protein L20"
species:44689 "Dictyostelium discoideum" [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 dictyBase:DDB_G0273771 dictyBase:DDB_G0273295
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 eggNOG:COG0292 OMA:MRTLWIS RefSeq:XP_644502.1
RefSeq:XP_644748.1 ProteinModelPortal:Q556W7 STRING:Q556W7
EnsemblProtists:DDB0203044 EnsemblProtists:DDB0217299
GeneID:8618848 GeneID:8619128 KEGG:ddi:DDB_G0273295
KEGG:ddi:DDB_G0273771 InParanoid:Q556W7 ProtClustDB:PTZ00030
Uniprot:Q556W7
Length = 122
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 61/104 (58%), Positives = 81/104 (77%)
Query: 1 MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60
MN ++FKLAKGF GR+KNC +ARERVEK L+Y+Y R+ KKRD R +WI+RINAG RQ
Sbjct: 1 MNIDKVFKLAKGFFGRSKNCKSLARERVEKGLEYNYVSRKLKKRDFRKMWIERINAGARQ 60
Query: 61 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRN 104
H + Y +F GL+ +++NRK+LSEL++ EP+SFK LVD S+N
Sbjct: 61 HEMTYSDFQRGLIASGVEINRKILSELAVSEPFSFKVLVDHSKN 104
>DICTYBASE|DDB_G0273295 [details] [associations]
symbol:DDB_G0273295 "39S ribosomal protein L20,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
dictyBase:DDB_G0273771 dictyBase:DDB_G0273295 HAMAP:MF_00382
GO:GO:0006412 GO:GO:0005840 EMBL:AAFI02000011 EMBL:AAFI02000009
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
eggNOG:COG0292 OMA:MRTLWIS RefSeq:XP_644502.1 RefSeq:XP_644748.1
ProteinModelPortal:Q556W7 STRING:Q556W7 EnsemblProtists:DDB0203044
EnsemblProtists:DDB0217299 GeneID:8618848 GeneID:8619128
KEGG:ddi:DDB_G0273295 KEGG:ddi:DDB_G0273771 InParanoid:Q556W7
ProtClustDB:PTZ00030 Uniprot:Q556W7
Length = 122
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 61/104 (58%), Positives = 81/104 (77%)
Query: 1 MNKKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQ 60
MN ++FKLAKGF GR+KNC +ARERVEK L+Y+Y R+ KKRD R +WI+RINAG RQ
Sbjct: 1 MNIDKVFKLAKGFFGRSKNCKSLARERVEKGLEYNYVSRKLKKRDFRKMWIERINAGARQ 60
Query: 61 HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRN 104
H + Y +F GL+ +++NRK+LSEL++ EP+SFK LVD S+N
Sbjct: 61 HEMTYSDFQRGLIASGVEINRKILSELAVSEPFSFKVLVDHSKN 104
>TIGR_CMR|ECH_0197 [details] [associations]
symbol:ECH_0197 "ribosomal protein L20" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_507021.1 ProteinModelPortal:Q2GHR2
SMR:Q2GHR2 STRING:Q2GHR2 GeneID:3927150 KEGG:ech:ECH_0197
PATRIC:20575931 BioCyc:ECHA205920:GJNR-197-MONOMER Uniprot:Q2GHR2
Length = 124
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 64/110 (58%), Positives = 85/110 (77%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ KLAKG+RGR+KNC RIA +RVEKALQY+YRDRRN+KR RSLWI RINA RQHG+
Sbjct: 15 KKVIKLAKGYRGRSKNCYRIALQRVEKALQYAYRDRRNRKRFFRSLWIMRINAAVRQHGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGNKNIV 113
Y +F+HGL N+ LNRKVL++++++ FK +VD+ + A NK+ V
Sbjct: 75 LYSDFIHGLSLANVTLNRKVLADMAVNHKDHFKQIVDLIKEAL--NKSRV 122
>TIGR_CMR|NSE_0215 [details] [associations]
symbol:NSE_0215 "ribosomal protein L20" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_506110.1 ProteinModelPortal:Q2GEI6
SMR:Q2GEI6 STRING:Q2GEI6 GeneID:3931364 KEGG:nse:NSE_0215
PATRIC:22680529 BioCyc:NSEN222891:GHFU-246-MONOMER Uniprot:Q2GEI6
Length = 117
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 55/102 (53%), Positives = 74/102 (72%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ K AKGF GR+KNC RIA R+EK+ QY+YRDR+ +KRD RSLWIQRINA R G+
Sbjct: 15 KKVIKQAKGFHGRSKNCYRIALRRLEKSWQYAYRDRKVRKRDFRSLWIQRINAAVRSFGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
Y FM GL + +NRKVLSEL++ +P +F +V+ ++ A
Sbjct: 75 VYSVFMKGLKAAGVDVNRKVLSELAISQPSAFGEIVNKAKAA 116
>TIGR_CMR|APH_0060 [details] [associations]
symbol:APH_0060 "ribosomal protein L20" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0015934 "large ribosomal subunit"
evidence=ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 RefSeq:YP_504693.1
ProteinModelPortal:Q2GLQ8 SMR:Q2GLQ8 STRING:Q2GLQ8 GeneID:3930465
KEGG:aph:APH_0060 PATRIC:20948672 OMA:GRRKNVW ProtClustDB:PRK05185
BioCyc:APHA212042:GHPM-98-MONOMER Uniprot:Q2GLQ8
Length = 128
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 51/102 (50%), Positives = 73/102 (71%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ LAKG+RGR+KNC R A +R+EKAL Y+YRDRR +KRD RSLWI RINA +G+
Sbjct: 15 KKVIALAKGYRGRSKNCYRAALQRLEKALAYAYRDRRARKRDFRSLWIVRINAAAGLYGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
Y FMHG+ +I LNRK+L+E+++ + +F+ + + A
Sbjct: 75 RYSEFMHGVSLCSIGLNRKMLAEMAVRDKGAFEKIAHAAAQA 116
>TIGR_CMR|BA_4817 [details] [associations]
symbol:BA_4817 "ribosomal protein L20" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:NP_847020.1 RefSeq:YP_021463.1
RefSeq:YP_030716.1 ProteinModelPortal:Q81L17 SMR:Q81L17
DNASU:1083953 EnsemblBacteria:EBBACT00000008961
EnsemblBacteria:EBBACT00000014864 EnsemblBacteria:EBBACT00000023349
GeneID:1083953 GeneID:2815694 GeneID:2851580 KEGG:ban:BA_4817
KEGG:bar:GBAA_4817 KEGG:bat:BAS4469
BioCyc:BANT260799:GJAJ-4526-MONOMER
BioCyc:BANT261594:GJ7F-4679-MONOMER Uniprot:Q81L17
Length = 118
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 45/102 (44%), Positives = 71/102 (69%)
Query: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
+K++ KLAKG+ G ++A ++V K+L Y++RDRR KKRD R LWI RINA R +G
Sbjct: 14 RKKVIKLAKGYYGSKNTLFKVANQQVMKSLMYAFRDRRQKKRDFRKLWITRINAAARMNG 73
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRN 104
++Y MHGL I++NRK+L++L++H+ +F L +++N
Sbjct: 74 LSYSRLMHGLKNAGIEVNRKMLADLAVHDEKAFAELATVAKN 115
>TIGR_CMR|CHY_1576 [details] [associations]
symbol:CHY_1576 "ribosomal protein L20" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_360405.1 ProteinModelPortal:Q3ABS9
SMR:Q3ABS9 STRING:Q3ABS9 GeneID:3726239 KEGG:chy:CHY_1576
PATRIC:21276277 BioCyc:CHYD246194:GJCN-1575-MONOMER Uniprot:Q3ABS9
Length = 117
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 46/100 (46%), Positives = 72/100 (72%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K+I KLAKG+ G R+A+++V K+L Y+YRDRR +KR+ R LWI RINA R HG+
Sbjct: 15 KKILKLAKGYFGAKSKLFRVAKQQVMKSLMYAYRDRRARKREFRKLWITRINAAARMHGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y M+GL K +++NRK+L++L++++ +F LV+I++
Sbjct: 75 TYSRMMNGLKKAGVEINRKMLADLAVNDKNAFAELVEIAK 114
>TIGR_CMR|GSU_1518 [details] [associations]
symbol:GSU_1518 "ribosomal protein L20" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
RefSeq:NP_952569.1 ProteinModelPortal:Q74D01 SMR:Q74D01
GeneID:2687711 KEGG:gsu:GSU1518 PATRIC:22025877
BioCyc:GSUL243231:GH27-1501-MONOMER Uniprot:Q74D01
Length = 117
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 44/104 (42%), Positives = 72/104 (69%)
Query: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
+ ++ KLAKGFRG R A E V++AL Y++RDR+ KKRD R+LWI RINA +R +G
Sbjct: 14 RNKVLKLAKGFRGARSKLFRSATEAVDRALNYAFRDRKVKKRDFRALWITRINAASRLNG 73
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAF 106
++Y +HGL + ++++RKVL++L++ +P F + +++ F
Sbjct: 74 LSYSKLIHGLKQAQVEIDRKVLADLAVSDPKGFSEIATLAKAQF 117
>TIGR_CMR|SO_2302 [details] [associations]
symbol:SO_2302 "ribosomal protein L20" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
RefSeq:NP_717898.1 ProteinModelPortal:Q8EER6 SMR:Q8EER6
GeneID:1170027 KEGG:son:SO_2302 PATRIC:23524227 Uniprot:Q8EER6
Length = 118
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 46/102 (45%), Positives = 71/102 (69%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ KLAKG+ G R+A + V KA QY+YRDRR KKR R LWI RINA RQ+G+
Sbjct: 15 KKVLKLAKGYYGARSRTYRVAVQAVTKAGQYAYRDRRQKKRQFRQLWIARINAAARQNGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
+Y F++GL K +I+++RK+L+++++ + F LV+ ++ A
Sbjct: 75 SYSRFINGLKKASIEIDRKILADIAVFDKVVFATLVEKAKEA 116
>UNIPROTKB|P0A7L3 [details] [associations]
symbol:rplT "50S ribosomal subunit protein L20"
species:83333 "Escherichia coli K-12" [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IMP] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000027
"ribosomal large subunit assembly" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=IDA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0000900 GO:GO:0000027 PDB:2VHM PDBsum:2VHM PDB:2RDO
PDBsum:2RDO GO:GO:0022625 EMBL:V00291 EMBL:K02844 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT
PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ
PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX OMA:GRRKNVW ProtClustDB:PRK05185
EMBL:M10423 PIR:D64930 RefSeq:NP_416231.1 RefSeq:YP_489978.1
ProteinModelPortal:P0A7L3 SMR:P0A7L3 DIP:DIP-47941N IntAct:P0A7L3
MINT:MINT-1321645 PaxDb:P0A7L3 PRIDE:P0A7L3
EnsemblBacteria:EBESCT00000000901 EnsemblBacteria:EBESCT00000004116
EnsemblBacteria:EBESCT00000004117 EnsemblBacteria:EBESCT00000004118
EnsemblBacteria:EBESCT00000004120 EnsemblBacteria:EBESCT00000016309
GeneID:12931309 GeneID:945152 KEGG:ecj:Y75_p1691 KEGG:eco:b1716
PATRIC:32118736 EchoBASE:EB0874 EcoGene:EG10881
BioCyc:EcoCyc:EG10881-MONOMER BioCyc:ECOL316407:JW1706-MONOMER
EvolutionaryTrace:P0A7L3 Genevestigator:P0A7L3 Uniprot:P0A7L3
Length = 118
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 45/102 (44%), Positives = 72/102 (70%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K+I K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G+
Sbjct: 15 KKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGI 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
+Y F++GL K +++++RK+L+++++ + +F ALV+ ++ A
Sbjct: 75 SYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAA 116
>TIGR_CMR|SPO_3598 [details] [associations]
symbol:SPO_3598 "ribosomal protein L20" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_168793.1 ProteinModelPortal:Q5LMG5
SMR:Q5LMG5 GeneID:3196278 KEGG:sil:SPO3598 PATRIC:23380673
Uniprot:Q5LMG5
Length = 121
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 46/98 (46%), Positives = 71/98 (72%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQH-- 61
K++ K AKG+ GR K+ ++A + V+KA QY+ RDR+ +KR+ R+LWIQRINA R H
Sbjct: 15 KKVLKAAKGYYGRRKSSFKVATQAVDKANQYATRDRKARKRNFRALWIQRINAAVRSHDE 74
Query: 62 GVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALV 99
+ Y F++GL I+++RKVL++L++HEP +F A+V
Sbjct: 75 ALTYSRFINGLNLAGIEVDRKVLADLAVHEPEAFGAIV 112
>TIGR_CMR|CJE_0295 [details] [associations]
symbol:CJE_0295 "ribosomal protein L20" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:YP_178316.1 ProteinModelPortal:Q5HWL9
SMR:Q5HWL9 STRING:Q5HWL9 GeneID:3231057 KEGG:cjr:CJE0295
PATRIC:20042290 BioCyc:CJEJ195099:GJC0-300-MONOMER Uniprot:Q5HWL9
Length = 117
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 47/103 (45%), Positives = 75/103 (72%)
Query: 4 KEIFKLAKGF-RGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
K++ KLA+GF GR K+ R A+E++E++L Y+YRDRR KKRD R LWI RINA R +
Sbjct: 15 KKVLKLARGFYSGRRKH-FRKAKEQLERSLVYAYRDRRRKKRDFRRLWIVRINAACRLND 73
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
++Y F++GL K I+L+RK+L++L+M++ +F + + ++ A
Sbjct: 74 LSYSRFINGLKKAGIELDRKILADLAMNDAAAFAKIAEAAKKA 116
>UNIPROTKB|P0A479 [details] [associations]
symbol:rplT "50S ribosomal protein L20" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 eggNOG:COG0292
KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185 EMBL:AF055586
EMBL:AF179591 PIR:B82476 RefSeq:NP_232686.1
ProteinModelPortal:P0A479 SMR:P0A479 PRIDE:P0A479 DNASU:2611990
GeneID:2611990 KEGG:vch:VCA0290 PATRIC:20085147 Uniprot:P0A479
Length = 117
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 45/102 (44%), Positives = 71/102 (69%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ K AKG+ G R+A + V KA QY+YRDRR KKR R LWI RINA RQ+G+
Sbjct: 15 KKVLKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRAKKRQFRQLWIARINAAARQNGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
+Y F++GL K +I+++RK+L+++++ + +F LV+ ++ A
Sbjct: 75 SYSRFINGLKKASIEIDRKILADIAVFDKAAFAVLVEKAKGA 116
>TIGR_CMR|VC_A0290 [details] [associations]
symbol:VC_A0290 "ribosomal protein L20" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 eggNOG:COG0292 KO:K02887
OMA:GRRKNVW ProtClustDB:PRK05185 EMBL:AF055586 EMBL:AF179591
PIR:B82476 RefSeq:NP_232686.1 ProteinModelPortal:P0A479 SMR:P0A479
PRIDE:P0A479 DNASU:2611990 GeneID:2611990 KEGG:vch:VCA0290
PATRIC:20085147 Uniprot:P0A479
Length = 117
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 45/102 (44%), Positives = 71/102 (69%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ K AKG+ G R+A + V KA QY+YRDRR KKR R LWI RINA RQ+G+
Sbjct: 15 KKVLKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRAKKRQFRQLWIARINAAARQNGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNA 105
+Y F++GL K +I+++RK+L+++++ + +F LV+ ++ A
Sbjct: 75 SYSRFINGLKKASIEIDRKILADIAVFDKAAFAVLVEKAKGA 116
>TIGR_CMR|CBU_1323 [details] [associations]
symbol:CBU_1323 "ribosomal protein L20" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 OMA:GRRKNVW
ProtClustDB:PRK05185 RefSeq:NP_820313.1 ProteinModelPortal:Q83C13
SMR:Q83C13 GeneID:1209229 KEGG:cbu:CBU_1323 PATRIC:17931381
BioCyc:CBUR227377:GJ7S-1313-MONOMER Uniprot:Q83C13
Length = 119
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 43/105 (40%), Positives = 71/105 (67%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ AKG+ G R+A++ V KA QY+YRDR+ +KR R+LWI RINA R+HG+
Sbjct: 15 KKVLTKAKGYYGARSRVFRVAKQAVIKAAQYAYRDRKQRKRQFRALWIVRINAAAREHGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPG 108
+Y ++GLMK ++ ++RK L+EL++++ +F L + ++ A G
Sbjct: 75 SYSRLINGLMKASVAIDRKNLAELAVYDKAAFGKLAEKAKQALGG 119
>TIGR_CMR|CPS_2906 [details] [associations]
symbol:CPS_2906 "ribosomal protein L20" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0015934 "large ribosomal subunit"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
RefSeq:YP_269607.1 ProteinModelPortal:Q480B2 SMR:Q480B2
STRING:Q480B2 GeneID:3520510 KEGG:cps:CPS_2906 PATRIC:21468837
BioCyc:CPSY167879:GI48-2956-MONOMER Uniprot:Q480B2
Length = 119
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 43/97 (44%), Positives = 69/97 (71%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ K AKG+ G R+A + V KA QY+YRDRR +KR R LWI RINA RQ+G+
Sbjct: 15 KKVLKQAKGYYGARSRVYRVAYQAVTKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVD 100
+Y F++GL K +I+++RK+L+++++++ +F LV+
Sbjct: 75 SYSKFINGLKKASIEIDRKILADIAVYDKAAFTFLVE 111
>GENEDB_PFALCIPARUM|PF14_0709 [details] [associations]
symbol:PF14_0709 "ribosomal protein L20,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
EMBL:AE014187 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 ProtClustDB:PTZ00030 GO:GO:0000315
RefSeq:XP_001348883.1 ProteinModelPortal:Q8IK97
EnsemblProtists:PF14_0709:mRNA GeneID:812291 KEGG:pfa:PF14_0709
EuPathDB:PlasmoDB:PF3D7_1474100 OMA:LLYSYIM Uniprot:Q8IK97
Length = 121
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
++ +F++AKGFRGR+K C +IAR R KAL YSY RR K R +R WI IN R+
Sbjct: 5 REVVFQVAKGFRGRSKGCFKIARSRAMKALLYSYIMRRQKYRRLRVHWIASINRACREWK 64
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y +FM+ L+ NI L+RK L L EP SFK L+D S+
Sbjct: 65 FTYAHFMNSLLNNNILLSRKSLYNLCYTEPISFKCLIDESK 105
>UNIPROTKB|Q8IK97 [details] [associations]
symbol:PF14_0709 "Mitochondrial ribosomal protein L20,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
EMBL:AE014187 GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 ProtClustDB:PTZ00030 GO:GO:0000315
RefSeq:XP_001348883.1 ProteinModelPortal:Q8IK97
EnsemblProtists:PF14_0709:mRNA GeneID:812291 KEGG:pfa:PF14_0709
EuPathDB:PlasmoDB:PF3D7_1474100 OMA:LLYSYIM Uniprot:Q8IK97
Length = 121
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 49/101 (48%), Positives = 64/101 (63%)
Query: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
++ +F++AKGFRGR+K C +IAR R KAL YSY RR K R +R WI IN R+
Sbjct: 5 REVVFQVAKGFRGRSKGCFKIARSRAMKALLYSYIMRRQKYRRLRVHWIASINRACREWK 64
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y +FM+ L+ NI L+RK L L EP SFK L+D S+
Sbjct: 65 FTYAHFMNSLLNNNILLSRKSLYNLCYTEPISFKCLIDESK 105
>FB|FBgn0036335 [details] [associations]
symbol:mRpL20 "mitochondrial ribosomal protein L20"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 EMBL:AE014296
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 eggNOG:COG0292 CTD:55052
GeneTree:ENSGT00390000015823 OMA:MRTLWIS HSSP:O67086 EMBL:BT089020
RefSeq:NP_524051.1 UniGene:Dm.2752 SMR:Q9VU36 STRING:Q9VU36
EnsemblMetazoa:FBtr0075897 GeneID:39477 KEGG:dme:Dmel_CG11258
UCSC:CG11258-RA FlyBase:FBgn0036335 InParanoid:Q9VU36
OrthoDB:EOG4FXPQW GenomeRNAi:39477 NextBio:813845 Uniprot:Q9VU36
Length = 150
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 48/101 (47%), Positives = 65/101 (64%)
Query: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
K+ IFKLA +R R +N A V +AL Y+ + R+ KK DM LW R+ AG +Q+G
Sbjct: 21 KRRIFKLAAHYRSRTRNVYSFAIRSVHRALAYATKGRKLKKLDMAQLWSTRVEAGCQQYG 80
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
V F GL + +I LN+KVLS+L++ EP SF+ALV ISR
Sbjct: 81 VGLETFKEGLARSDILLNKKVLSDLAIWEPRSFEALVKISR 121
>UNIPROTKB|P66105 [details] [associations]
symbol:rplT "50S ribosomal protein L20" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
EMBL:BX842577 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 KO:K02887 OMA:GRRKNVW ProtClustDB:PRK05185
PIR:F70619 RefSeq:NP_216159.1 RefSeq:NP_336136.1
RefSeq:YP_006515034.1 ProteinModelPortal:P66105 SMR:P66105
PRIDE:P66105 EnsemblBacteria:EBMYCT00000000901
EnsemblBacteria:EBMYCT00000072851 GeneID:13316424 GeneID:885455
GeneID:924365 KEGG:mtc:MT1681 KEGG:mtu:Rv1643 KEGG:mtv:RVBD_1643
PATRIC:18125460 TubercuList:Rv1643 Uniprot:P66105
Length = 129
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 41/109 (37%), Positives = 70/109 (64%)
Query: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHG 62
++ I K ++G+RG+ R A+E+ +L Y+YRDRR +K + R LWI RINA R +
Sbjct: 14 RRSILKASRGYRGQRSRLYRKAKEQQLHSLNYAYRDRRARKGEFRKLWIARINAAARLND 73
Query: 63 VNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISRNAFPGNKN 111
+ Y + GL ++++RK L+++++ +P +F ALVD++R A P + N
Sbjct: 74 ITYNRLIQGLKAAGVEVDRKNLADIAISDPAAFTALVDVARAALPEDVN 122
>UNIPROTKB|E1BRV2 [details] [associations]
symbol:MRPL20 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 CTD:55052
GeneTree:ENSGT00390000015823 OMA:MRTLWIS EMBL:AADN02040864
IPI:IPI00573274 RefSeq:XP_001234297.1 UniGene:Gga.1933
Ensembl:ENSGALT00000002342 GeneID:770979 KEGG:gga:770979
NextBio:20921185 Uniprot:E1BRV2
Length = 149
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 40/100 (40%), Positives = 68/100 (68%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C ++A V++A S R R+ KKR +R+LWI RI A + +HG+
Sbjct: 22 QEVLKYARHFRGRKNRCYKLAVRNVQRAFVKSTRARKQKKRFLRALWITRIEAASLEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y F+ L K ++LNRK++++L+++EP +FK+L +++
Sbjct: 82 KYSAFISNLFKTQVELNRKMIADLAIYEPKTFKSLAALAQ 121
>UNIPROTKB|F1RJD0 [details] [associations]
symbol:MRPL20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
HAMAP:MF_00382 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 OMA:GRRKNVW
GeneTree:ENSGT00390000015823 EMBL:FP102593 RefSeq:XP_003127555.3
Ensembl:ENSSSCT00000003716 GeneID:100511022 KEGG:ssc:100511022
Uniprot:F1RJD0
Length = 149
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 43/100 (43%), Positives = 68/100 (68%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C R+A V +A R RR KKR +R+LWI RI A +++HG+
Sbjct: 22 QEVLKHARHFRGRKNRCYRLAVRAVTRAFVKCTRARRLKKRSLRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y F+ L+K ++LNRKVL++L+++EP +FK+L +++
Sbjct: 82 KYPAFIINLIKCQVELNRKVLADLAIYEPKTFKSLAALAK 121
>UNIPROTKB|Q2TBR2 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 PDB:2FTC PDBsum:2FTC
EMBL:BC109775 IPI:IPI00692693 RefSeq:NP_001033595.1
UniGene:Bt.52937 ProteinModelPortal:Q2TBR2 STRING:Q2TBR2
PRIDE:Q2TBR2 Ensembl:ENSBTAT00000006406 GeneID:506358
KEGG:bta:506358 CTD:55052 GeneTree:ENSGT00390000015823
HOVERGEN:HBG058971 InParanoid:Q2TBR2 OMA:MRTLWIS OrthoDB:EOG4ZS94J
EvolutionaryTrace:Q2TBR2 NextBio:20867575 Uniprot:Q2TBR2
Length = 149
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 43/100 (43%), Positives = 67/100 (67%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C R+A V +A R R KKR +R+LWI RI A +++HG+
Sbjct: 22 QEVLKHARHFRGRKNRCYRLAVRAVTRAFVRCTRARSLKKRHLRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y F+ L+K ++LNRKVL++L+++EP +FK+L +S+
Sbjct: 82 KYPAFILNLIKCQVELNRKVLADLAIYEPKTFKSLAALSK 121
>MGI|MGI:2137221 [details] [associations]
symbol:Mrpl20 "mitochondrial ribosomal protein L20"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005761
"mitochondrial ribosome" evidence=ISO] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 MGI:MGI:2137221 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0005761 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 HOGENOM:HOG000035046 eggNOG:COG0292 OMA:GRRKNVW
CTD:55052 GeneTree:ENSGT00390000015823 HOVERGEN:HBG058971
OrthoDB:EOG4ZS94J HSSP:O67086 EMBL:AB049645 EMBL:AK004053
EMBL:AK011341 EMBL:AK015199 EMBL:AK168665 EMBL:BC039985
IPI:IPI00471157 RefSeq:NP_079846.1 UniGene:Mm.23825
ProteinModelPortal:Q9CQL4 SMR:Q9CQL4 STRING:Q9CQL4
PhosphoSite:Q9CQL4 PaxDb:Q9CQL4 PRIDE:Q9CQL4
Ensembl:ENSMUST00000030942 GeneID:66448 KEGG:mmu:66448
InParanoid:Q9CQL4 NextBio:321725 Bgee:Q9CQL4 CleanEx:MM_MRPL20
Genevestigator:Q9CQL4 GermOnline:ENSMUSG00000029066 Uniprot:Q9CQL4
Length = 149
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 42/100 (42%), Positives = 68/100 (68%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C R+A V +A + RR KKR++R+LWI RI A +++HG+
Sbjct: 22 QEVLKHAQHFRGRKNRCYRLAVRAVTRAFVKCTKARRLKKRNLRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y F+ L+K ++LNRKVL +L+++EP +FK+L +++
Sbjct: 82 KYPAFIVNLIKCQVELNRKVLVDLAIYEPKTFKSLAALAK 121
>ZFIN|ZDB-GENE-030131-5299 [details] [associations]
symbol:mrpl20 "mitochondrial ribosomal protein
L20" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
ZFIN:ZDB-GENE-030131-5299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 CTD:55052 HOVERGEN:HBG058971 EMBL:BC122232
IPI:IPI00786560 RefSeq:NP_001038824.1 UniGene:Dr.75947
ProteinModelPortal:Q0P478 GeneID:751640 KEGG:dre:751640
NextBio:20917792 ArrayExpress:Q0P478 Uniprot:Q0P478
Length = 149
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C +A V +A Y+ + R+ K+R MR LWI RI A TR+HG+
Sbjct: 22 QELLKNARHFRGRKSRCYSLAVRAVRRAFVYASKARKAKRRSMRQLWITRIAAATREHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y +H L+K ++ LNR++L +LS+ EP SF +L ++R
Sbjct: 82 KYPALVHQLLKCSVLLNRRMLCDLSITEPRSFLSLCRLAR 121
>RGD|1588219 [details] [associations]
symbol:Mrpl20 "mitochondrial ribosomal protein L20"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005761 "mitochondrial ribosome"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR005813
Pfam:PF00453 PRINTS:PR00062 RGD:1588219 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0005761 EMBL:CH473968 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 HOGENOM:HOG000035046 eggNOG:COG0292 CTD:55052
GeneTree:ENSGT00390000015823 HOVERGEN:HBG058971 OMA:MRTLWIS
OrthoDB:EOG4ZS94J EMBL:BC166541 IPI:IPI00763487
RefSeq:NP_001102898.1 UniGene:Rn.2913 STRING:B2GV62
Ensembl:ENSRNOT00000025213 GeneID:680747 KEGG:rno:680747
NextBio:719420 Genevestigator:B2GV62 Uniprot:B2GV62
Length = 149
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A FRGR C R+A V +A RR KKR++R+LWI RI A +++HG+
Sbjct: 22 QEVLKHAGHFRGRKNRCYRLAVRAVTRAFVKCTNSRRLKKRNLRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y F+ L+K ++LNRKVL +L+++EP +FK+L +++
Sbjct: 82 QYPAFILNLVKCQVELNRKVLVDLAIYEPKTFKSLAALAK 121
>UNIPROTKB|E2QZ57 [details] [associations]
symbol:MRPL20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0005761 PANTHER:PTHR10986 TIGRFAMs:TIGR01032 CTD:55052
GeneTree:ENSGT00390000015823 OMA:MRTLWIS EMBL:AAEX03003846
RefSeq:XP_536709.1 Ensembl:ENSCAFT00000030578 GeneID:479569
KEGG:cfa:479569 NextBio:20854737 Uniprot:E2QZ57
Length = 149
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 40/100 (40%), Positives = 69/100 (69%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+++ + A+ FRGR C ++A V +A + RR KKR+MR+LWI RI A +++HG+
Sbjct: 22 QKVLQHARHFRGRKNRCYKLAVRAVTRAFVKCTKARRLKKRNMRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDISR 103
Y F+ L+K ++LNRKVL++L+++EP +FK+L +++
Sbjct: 82 KYPAFIVNLIKCQVELNRKVLADLAIYEPKTFKSLAALAK 121
>UNIPROTKB|Q9BYC9 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005761 "mitochondrial ribosome"
evidence=IDA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 EMBL:AB049644 GO:GO:0006412 EMBL:CH471183
GO:GO:0003735 GO:GO:0019843 EMBL:AL391244 GO:GO:0005761
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 HOGENOM:HOG000035046
eggNOG:COG0292 OMA:GRRKNVW CTD:55052 HOVERGEN:HBG058971
OrthoDB:EOG4ZS94J EMBL:AK315794 EMBL:BC009515 EMBL:BC014316
EMBL:BC059945 IPI:IPI00013706 RefSeq:NP_060441.2 UniGene:Hs.182698
HSSP:O67086 ProteinModelPortal:Q9BYC9 SMR:Q9BYC9 IntAct:Q9BYC9
MINT:MINT-1419302 STRING:Q9BYC9 PhosphoSite:Q9BYC9 DMDM:74752447
PaxDb:Q9BYC9 PeptideAtlas:Q9BYC9 PRIDE:Q9BYC9
Ensembl:ENST00000344843 GeneID:55052 KEGG:hsa:55052 UCSC:uc001afo.4
GeneCards:GC01M001329 H-InvDB:HIX0000027 HGNC:HGNC:14478
HPA:HPA047074 MIM:611833 neXtProt:NX_Q9BYC9 PharmGKB:PA30950
InParanoid:Q9BYC9 PhylomeDB:Q9BYC9 GenomeRNAi:55052 NextBio:58521
Bgee:Q9BYC9 CleanEx:HS_MRPL20 Genevestigator:Q9BYC9
GermOnline:ENSG00000131586 Uniprot:Q9BYC9
Length = 149
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 43/106 (40%), Positives = 68/106 (64%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C R+A V +A + R KK++MR+LWI RI A +++HG+
Sbjct: 22 QEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDI-SRNAFPG 108
Y + L+K ++LNRKVL++L+++EP +FK+L + SR G
Sbjct: 82 KYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALASRRRHEG 127
>TIGR_CMR|DET_0750 [details] [associations]
symbol:DET_0750 "ribosomal protein L20" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR005813 Pfam:PF00453
PRINTS:PR00062 PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 eggNOG:COG0292 KO:K02887 ProtClustDB:PRK05185
RefSeq:YP_181484.1 ProteinModelPortal:Q3Z8G5 STRING:Q3Z8G5
GeneID:3229942 KEGG:det:DET0750 PATRIC:21608561 OMA:GIATHKR
BioCyc:DETH243164:GJNF-751-MONOMER Uniprot:Q3Z8G5
Length = 119
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
K++ L KG + + A E + A+ Y++ RR +K DMR LWI RINA R G+
Sbjct: 15 KKVLALTKGHASARHSLFKRAHESMVHAMSYAFAHRRARKGDMRRLWITRINAAARAEGL 74
Query: 64 NYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKAL 98
YG M GL I +NRKVL+++++ + +F A+
Sbjct: 75 TYGELMSGLKTAGIDINRKVLADMAVSDSVAFAAV 109
>UNIPROTKB|P0C448 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0005840 EMBL:AY522329 GO:GO:0003735
GO:GO:0019843 PANTHER:PTHR10986 TIGRFAMs:TIGR01032
HOGENOM:HOG000035046 ProteinModelPortal:P0C448 SMR:P0C448
Gramene:P0C448 Uniprot:P0C448
Length = 119
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 10 AKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV--NYGN 67
A FRG R+ ++V +A S+RDR +KRD R LWI RINA TR H V NY
Sbjct: 21 ASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRLWISRINAATRIHKVFDNYSK 80
Query: 68 FMHGLMKENIQLNRKVLSELSMHEP 92
+H L K+ + LNRK+L+++++ P
Sbjct: 81 LIHNLYKKELILNRKILAQVAVLNP 105
>UNIPROTKB|Q6ENF0 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AP006728
RefSeq:YP_052773.1 ProteinModelPortal:Q6ENF0 SMR:Q6ENF0
GeneID:2885898 Gramene:Q6ENF0 ProtClustDB:CHL00068
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 Uniprot:Q6ENF0
Length = 119
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 10 AKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV--NYGN 67
A FRG R+ ++V +A S+RDR +KRD R LWI RINA TR H V NY
Sbjct: 21 ASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRLWISRINAATRIHKVFDNYSK 80
Query: 68 FMHGLMKENIQLNRKVLSELSMHEP 92
+H L K+ + LNRK+L+++++ P
Sbjct: 81 LIHNLYKKELILNRKILAQVAVLNP 105
>UNIPROTKB|P0C447 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062 PROSITE:PS00937
HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0005840 EMBL:AY522331 GO:GO:0003735 GO:GO:0019843
PANTHER:PTHR10986 TIGRFAMs:TIGR01032 ProteinModelPortal:P0C447
SMR:P0C447 PRIDE:P0C447 Gramene:P0C447 HOGENOM:HOG000035046
Genevestigator:P0C447 Uniprot:P0C447
Length = 119
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 10 AKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV--NYGN 67
A FRG R+ ++V +A S+RDR +KRD R LWI RINA TR H V NY
Sbjct: 21 ASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRLWISRINAATRIHKVFDNYSK 80
Query: 68 FMHGLMKENIQLNRKVLSELSM 89
+H L K+ + LNRK+L+++++
Sbjct: 81 LIHNLYKKELILNRKILAQVAV 102
>UNIPROTKB|P12139 [details] [associations]
symbol:rpl20 "50S ribosomal protein L20, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC;ISS] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
PROSITE:PS00937 HAMAP:MF_00382 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0005840 EMBL:X15901 EMBL:AY522330 GO:GO:0003735
GO:GO:0019843 ProtClustDB:CHL00068 PANTHER:PTHR10986
TIGRFAMs:TIGR01032 PIR:JQ0249 RefSeq:NP_039409.1
ProteinModelPortal:P12139 SMR:P12139 STRING:P12139
EnsemblPlants:LOC_Os10g21314.1 EnsemblPlants:LOC_Osp1g00580.1
GeneID:3131425 KEGG:osa:3131425 Gramene:P12139 eggNOG:COG0292
KO:K02887 OMA:SNNLYTI Uniprot:P12139
Length = 119
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 10 AKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV--NYGN 67
A FRG R+ ++V +A S+RDR +KRD R LWI RINA TR H V NY
Sbjct: 21 ASNFRGAHLRLNRMITQQVRRAFVSSHRDRVRQKRDFRRLWISRINAATRIHKVFDNYSK 80
Query: 68 FMHGLMKENIQLNRKVLSELSM 89
+H L K+ + LNRK+L+++++
Sbjct: 81 LIHNLYKKELILNRKILAQVAV 102
>UNIPROTKB|B7Z746 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 PRINTS:PR00062
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
EMBL:AL391244 PANTHER:PTHR10986 HGNC:HGNC:14478 EMBL:AK301440
IPI:IPI00922449 SMR:B7Z746 STRING:B7Z746 Ensembl:ENST00000482352
UCSC:uc010nyn.1 Uniprot:B7Z746
Length = 155
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 4 KEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGV 63
+E+ K A+ FRGR C R+A V +A + R KK++MR+LWI RI A +++HG+
Sbjct: 22 QEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTLWINRITAASQEHGL 81
Query: 64 NYGNFMHGLMK 74
Y + L+K
Sbjct: 82 KYPALIGNLVK 92
>UNIPROTKB|I3L2X1 [details] [associations]
symbol:MRPL20 "39S ribosomal protein L20, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR005813 Pfam:PF00453 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:AL391244
PANTHER:PTHR10986 HGNC:HGNC:14478 Ensembl:ENST00000492508
Bgee:I3L2X1 Uniprot:I3L2X1
Length = 66
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 20 CIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMK 74
C R+A V +A + R KK++MR+LWI RI A +++HG+ Y + L+K
Sbjct: 2 CYRLAVRTVIRAFVKCTKARYLKKKNMRTLWINRITAASQEHGLKYPALIGNLVK 56
>WB|WBGene00012992 [details] [associations]
symbol:mrpl-20 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR005813
Pfam:PF00453 GO:GO:0009792 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 PANTHER:PTHR10986 EMBL:AL117203
PIR:T31594 RefSeq:NP_496817.1 ProteinModelPortal:Q9NAG2 SMR:Q9NAG2
DIP:DIP-24543N MINT:MINT-1105734 PaxDb:Q9NAG2
EnsemblMetazoa:Y48C3A.10.1 EnsemblMetazoa:Y48C3A.10.2 GeneID:174976
KEGG:cel:CELE_Y48C3A.10 UCSC:Y48C3A.10 CTD:174976
WormBase:Y48C3A.10 eggNOG:NOG258985 HOGENOM:HOG000021936
InParanoid:Q9NAG2 OMA:WQYASER NextBio:886260 Uniprot:Q9NAG2
Length = 191
Score = 94 (38.1 bits), Expect = 0.00015, P = 0.00015
Identities = 25/106 (23%), Positives = 54/106 (50%)
Query: 18 KNCIRIARERVEKALQYSYRDRRNKKRDMRSLWIQRINAGTRQHGVNYGNFMHGLMKENI 77
++ ++ A + +K Y R++++ + +R+ +H + Y F L + +I
Sbjct: 47 RSTVKGAYRKEDKIFAYLNMQRQDERNLEKFHAEERVRTALEEHDMEYSKFKSILSQSHI 106
Query: 78 QLNRKVLSELSMHEPYSFKALVDISRN-AFPGNKNIVHPPRKADIS 122
L+ LS+L+++EP SF++LV ++ A N++ P A+ S
Sbjct: 107 LLDNICLSQLAIYEPRSFRSLVAFAKELARQEGMNVI--PDDAEFS 150
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 125 125 0.00091 102 3 11 22 0.48 30
29 0.39 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 561 (60 KB)
Total size of DFA: 123 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.81u 0.10s 13.91t Elapsed: 00:00:01
Total cpu time: 13.81u 0.10s 13.91t Elapsed: 00:00:01
Start: Fri May 10 16:34:45 2013 End: Fri May 10 16:34:46 2013