BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033170
MRNSIFSPARARICFLILFMFFSTGYSLRMSSHHYISVSVDENGASRFDDHAAHVNPEPN
KGRETEEVGTGVYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYY
HVPSN

High Scoring Gene Products

Symbol, full name Information P value
EPF2
AT1G34245
protein from Arabidopsis thaliana 1.6e-22
EPF1
AT2G20875
protein from Arabidopsis thaliana 3.0e-14
CHAL
AT2G30370
protein from Arabidopsis thaliana 0.00019
CLL2
AT4G14723
protein from Arabidopsis thaliana 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033170
        (125 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006168 - symbol:EPF2 "AT1G34245" species:37...   261  1.6e-22   1
TAIR|locus:3436392 - symbol:EPF1 "AT2G20875" species:3702...   183  3.0e-14   1
TAIR|locus:2065719 - symbol:CHAL "AT2G30370" species:3702...    95  0.00019   1
TAIR|locus:1009023326 - symbol:CLL2 "AT4G14723" species:3...    88  0.00035   1


>TAIR|locus:505006168 [details] [associations]
            symbol:EPF2 "AT1G34245" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010052 "guard cell
            differentiation" evidence=IMP] [GO:0010374 "stomatal complex
            development" evidence=IMP] [GO:0048730 "epidermis morphogenesis"
            evidence=IMP] [GO:2000122 "negative regulation of stomatal complex
            development" evidence=IMP] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005576 GO:GO:0048730 EMBL:AC007454 HOGENOM:HOG000240846
            GO:GO:2000122 EMBL:AB499311 EMBL:AY086790 IPI:IPI00518431
            RefSeq:NP_564442.1 UniGene:At.39780 STRING:Q8LC53
            EnsemblPlants:AT1G34245.1 GeneID:840324 KEGG:ath:AT1G34245
            TAIR:At1g34245 eggNOG:NOG235778 InParanoid:Q8LC53 OMA:VEMEMYP
            PhylomeDB:Q8LC53 ProtClustDB:CLSN2914950 Genevestigator:Q8LC53
            GO:GO:0010052 Uniprot:Q8LC53
        Length = 120

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 41/53 (77%), Positives = 49/53 (92%)

Query:    72 VYPTGSSIPDCSHACGPCFPCKRVMVSFKCSVAESCPIVYRCMCRGKYYHVPS 124
             +YPTGSS+PDCS+ACG C PCKRVM+SF+CSVAESC ++YRC CRG+YYHVPS
Sbjct:    66 MYPTGSSLPDCSYACGACSPCKRVMISFECSVAESCSVIYRCTCRGRYYHVPS 118


>TAIR|locus:3436392 [details] [associations]
            symbol:EPF1 "AT2G20875" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010375 "stomatal complex
            patterning" evidence=IMP] [GO:0010374 "stomatal complex
            development" evidence=IGI] [GO:2000122 "negative regulation of
            stomatal complex development" evidence=IMP] GO:GO:0005576
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0010374 EMBL:AC006234
            IPI:IPI00537528 RefSeq:NP_179684.1 UniGene:At.52849
            UniGene:At.69152 STRING:Q8S8I4 EnsemblPlants:AT2G20875.1
            GeneID:816621 KEGG:ath:AT2G20875 TAIR:At2g20875 eggNOG:NOG241289
            HOGENOM:HOG000240846 InParanoid:Q8S8I4 OMA:SHHHVGM PhylomeDB:Q8S8I4
            ProtClustDB:CLSN2913134 Genevestigator:Q8S8I4 GO:GO:2000122
            GO:GO:0010375 Uniprot:Q8S8I4
        Length = 104

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 34/55 (61%), Positives = 39/55 (70%)

Query:    72 VYPTGSSIPDCSHACGPCFPCKRVMVSFKC-SV--AESCPIVYRCMCRGKYYHVP 123
             V   GS +PDCSHACG C PC+ VMVSF C SV  AE+CP+ Y+CMC  K Y VP
Sbjct:    50 VQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104


>TAIR|locus:2065719 [details] [associations]
            symbol:CHAL "AT2G30370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:2000122 "negative
            regulation of stomatal complex development" evidence=IGI;IMP]
            EMBL:CP002685 GO:GO:2000122 IPI:IPI00992485 RefSeq:NP_850143.1
            UniGene:At.52976 EnsemblPlants:AT2G30370.1 GeneID:817587
            KEGG:ath:AT2G30370 OMA:HEDKDST Uniprot:F4IMT0
        Length = 230

 Score = 95 (38.5 bits), Expect = 0.00019, P = 0.00019
 Identities = 22/48 (45%), Positives = 23/48 (47%)

Query:    76 GSSIPDCSHACGPCFPCKRVMVSFKCSV---AESCPIVYRCMCRGKYY 120
             GSS P CS  CG C PCK V V         AE  P  +RC C  K Y
Sbjct:   181 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 228


>TAIR|locus:1009023326 [details] [associations]
            symbol:CLL2 "AT4G14723" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0010052 "guard cell differentiation" evidence=IMP]
            [GO:0010374 "stomatal complex development" evidence=IMP]
            GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97336
            EMBL:AL161539 EMBL:Z97337 GO:GO:0010052 EMBL:DQ487600
            IPI:IPI00656672 RefSeq:NP_001031641.1 UniGene:At.51142
            EnsemblPlants:AT4G14723.1 GeneID:3769880 KEGG:ath:AT4G14723
            KEGG:dosa:Os03t0161600-01 KEGG:dosa:Os11t0581700-01 TAIR:At4g14723
            eggNOG:NOG254545 HOGENOM:HOG000238413 OMA:RWIGQRT PhylomeDB:Q2V3I3
            ProtClustDB:CLSN2918741 Genevestigator:Q2V3I3 Uniprot:Q2V3I3
        Length = 109

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query:    76 GSSIPDCSHACGPCFPCKRVMVSFKCSVA---ESCPIVYRCMCRGKYY 120
             GSS P C   CG C PCK V V  +  ++   E  P  +RC C  K +
Sbjct:    60 GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLF 107


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.452    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125       125   0.00091  102 3  11 22  0.46    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  565 (60 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.53u 0.07s 14.60t   Elapsed:  00:00:03
  Total cpu time:  14.53u 0.07s 14.60t   Elapsed:  00:00:03
  Start:  Fri May 10 16:38:03 2013   End:  Fri May 10 16:38:06 2013

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