BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033171
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7F5|NTF2_ARATH Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2
SV=1
Length = 126
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 87/120 (72%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
+ V K FV HYY FD +R L+ LYQ SMLTFEGQK GV I K LPF QC+H
Sbjct: 7 DAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQCKHH 66
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
IST+D QP G+L+FVSG+LQLAGE+H L+FSQMFHL+PTP+GSF V NDIFRLNY
Sbjct: 67 ISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRLNYA 126
>sp|Q9XJ54|NTF2_ORYSJ Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2
PE=2 SV=1
Length = 122
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Query: 5 TELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRH 64
+ V K FV HYY FD +R +L SLYQ SMLTFEGQ+F G I+ K LPF QC H
Sbjct: 3 ADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQCHH 62
Query: 65 MISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNY 124
I+T+D QP GG+L+FVSGSL+ ++H L+FSQMF L+P G+F VQND+FRLNY
Sbjct: 63 DINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDMFRLNY 121
Query: 125 G 125
G
Sbjct: 122 G 122
>sp|Q9P926|NTF2_CANAX Nuclear transport factor 2 OS=Candida albicans GN=NTF2 PE=3 SV=1
Length = 124
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
V F YY+ FD+DR+ L +LY+ SMLTFE + G DI K LPF + H IS
Sbjct: 8 VATEFCNFYYNQFDSDRSQLGNLYRNESMLTFETSQLQGARDIVEKLASLPFQKVAHRIS 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP + G +L+ V+G L + E + R+SQ+FHLIP GS+ V NDIFRLNY
Sbjct: 68 TLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIP-DNGSYYVFNDIFRLNYS 124
>sp|Q10100|NTF2_SCHPO Nuclear transport factor 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ntf2 PE=3 SV=2
Length = 123
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ F YY FD+DR+ LSSLY+ SML+FEG + G I K LPF + +H IS
Sbjct: 7 LATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRIS 66
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP +TG +++ V+G L L E R+SQ+FHL+ G++ V ND+FRLNYG
Sbjct: 67 TLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDLFRLNYG 123
>sp|Q8NJ52|NTF2_DAVTA Nuclear transport factor 2 OS=Davidiella tassiana GN=NTF2 PE=1 SV=1
Length = 125
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ + F YY FD DRA L+ LY+ SMLTFE F G +I K +LPF + H ++
Sbjct: 7 IAQQFTEFYYKTFDTDRAQLAPLYRENSMLTFEQSPFLGTANIVGKLQELPFQRIEHQVA 66
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNY 124
T+D+QP +GG+L+ VSG+L + E + ++Q F L+P G++ V ND+FRL Y
Sbjct: 67 TVDAQPSNESGGILVVVSGALLVEEERRPMSYTQTFQLLPA-DGAYYVFNDVFRLVY 122
>sp|Q6BWC0|NTF2_DEBHA Nuclear transport factor 2 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=NTF2 PE=3 SV=1
Length = 124
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
V F YY FD+DR L +LY+ SMLTFE + G DI K LPF + H IS
Sbjct: 8 VASEFCNFYYQQFDSDRTQLGNLYREQSMLTFETSQLQGAKDIVEKLVSLPFQKVAHRIS 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP G +L+ V+G L + E + R+SQ+FHLIP S+ V NDIFRLNY
Sbjct: 68 TLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIPDG-NSYYVFNDIFRLNYS 124
>sp|P33331|NTF2_YEAST Nuclear transport factor 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NTF2 PE=1 SV=2
Length = 125
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ + F YY+ FD DR+ L +LY+ SMLTFE + G DI K LPF + +H I+
Sbjct: 8 LAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRIT 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP G +L+ ++G L + E + RFSQ+FHLIP S+ V NDIFRLNY
Sbjct: 68 TLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDG-NSYYVFNDIFRLNYS 124
>sp|Q75AA5|NTF2_ASHGO Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NTF2 PE=3 SV=1
Length = 125
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ + F YY+ FD DR+ L +LY+ SMLTFE + G DI K LPF + +H I+
Sbjct: 8 LAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQKVQHRIT 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP G +L+ ++G L + E + RFSQ+FHL+P S+ V NDIFRLNY
Sbjct: 68 TLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMPEG-NSYYVFNDIFRLNYS 124
>sp|Q6CQX4|NTF2_KLULA Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=NTF2 PE=3 SV=1
Length = 125
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ + F YY+ FD+DR L +LY+ SMLTFE + G DI K LPF + H I+
Sbjct: 8 LAQQFTEFYYNQFDSDRTQLGNLYREQSMLTFETTQLQGAKDIVEKLVSLPFQKVAHRIT 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP G +L+ ++G L + E + RFSQ+FHL+P S+ V NDIFRLNY
Sbjct: 68 TLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMPEG-SSYYVYNDIFRLNYS 124
>sp|Q96VN3|NTF2_EMENI Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ntf2 PE=3
SV=1
Length = 125
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ + FV YY FD +RA L+ LY+ SMLTFE GV I K LPF + +H +S
Sbjct: 7 IAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQHQVS 66
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNY 124
T+D+QP GG+L+ V+G+L + E + + ++Q F L+P GS+ V ND+FRL Y
Sbjct: 67 TLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLIY 123
>sp|Q6FRC6|NTF2_CANGA Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NTF2 PE=3
SV=1
Length = 125
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ + F YY+ FD+DR+ L +LY+ SMLTFE + G I K LPF + H I+
Sbjct: 8 LAQQFTEFYYNQFDSDRSQLGNLYRDESMLTFETSQLQGAKSIVEKLVSLPFQKVAHRIT 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125
T+D+QP G +L+ ++G L + E + RFSQ+FHLIP S+ V NDIFRLNY
Sbjct: 68 TLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIPDG-NSYYVFNDIFRLNYS 124
>sp|P87102|NTF2_NEUCR Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ntf-2 PE=2 SV=1
Length = 124
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ FV HYY FD+DR +L+ LY+ SMLTFEG + G I+ K LPF + +H
Sbjct: 8 IATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEKLTSLPFQKVKHEYG 67
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122
D+QP +TGG++I V+G L + E L +SQ F L G + V NDIF+L
Sbjct: 68 PPDAQPT-ATGGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIFKL 121
>sp|Q6CC82|NTF2_YARLI Nuclear transport factor 2 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=NTF2 PE=3 SV=1
Length = 123
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
+ K F YY FD DR+ L +LY+ SMLTF G + G I K LPF Q RH IS
Sbjct: 8 LAKQFCEFYYQTFDTDRSQLGNLYRDHSMLTFTGTQHQGAQAIVEKLVGLPFGQVRHKIS 67
Query: 68 TIDSQPCPSTGG-LLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLN 123
ID+QP + GG +++ V+G L + G D+ L ++Q+FHLIP S+ V NDIFRLN
Sbjct: 68 DIDAQPASAQGGDVIVLVTGELCVDG-DNPLPYAQVFHLIPD-GSSYYVFNDIFRLN 122
>sp|Q86HW7|NTF2_DICDI Nuclear transport factor 2 OS=Dictyostelium discoideum GN=nutf2
PE=1 SV=1
Length = 127
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIS 67
VGK FV HYY +FD++RA L+ +YQ + LT+EG+ G D I +LPF Q I+
Sbjct: 11 VGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTWEGKFLSGADAIVKHIVELPFQQTNRKIN 70
Query: 68 TIDSQPCPSTGGLLIFVSGSLQLAGE-DHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122
+ID Q G++I V+G+L + GE + L+F Q+F+L + GSF + ND FRL
Sbjct: 71 SIDCQQTYQP-GIMITVTGTLIIDGEAKNQLKFVQVFNL-ASNNGSFLLINDFFRL 124
>sp|P61972|NTF2_RAT Nuclear transport factor 2 OS=Rattus norvegicus GN=Nutf2 PE=1 SV=1
Length = 127
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E +G +F+ HYY LFDNDR L ++Y S LT+EGQ+F G I K + LPF + +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL--- 122
I+ D QP P + ++ V G L+ A ED + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPTPDS-CIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRLALH 124
Query: 123 NYG 125
N+G
Sbjct: 125 NFG 127
>sp|P61971|NTF2_MOUSE Nuclear transport factor 2 OS=Mus musculus GN=Nutf2 PE=2 SV=1
Length = 127
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E +G +F+ HYY LFDNDR L ++Y S LT+EGQ+F G I K + LPF + +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL--- 122
I+ D QP P + ++ V G L+ A ED + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPTPDS-CIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRLALH 124
Query: 123 NYG 125
N+G
Sbjct: 125 NFG 127
>sp|P61970|NTF2_HUMAN Nuclear transport factor 2 OS=Homo sapiens GN=NUTF2 PE=1 SV=1
Length = 127
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E +G +F+ HYY LFDNDR L ++Y S LT+EGQ+F G I K + LPF + +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL--- 122
I+ D QP P + ++ V G L+ A ED + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPTPDS-CIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRLALH 124
Query: 123 NYG 125
N+G
Sbjct: 125 NFG 127
>sp|Q32KP9|NTF2_BOVIN Nuclear transport factor 2 OS=Bos taurus GN=NUTF2 PE=2 SV=1
Length = 127
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E +G +F+ HYY LFDNDR L ++Y S LT+EGQ+F G I K + LPF + +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL--- 122
I+ D QP P + ++ V G L+ A ED + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPTPDS-CIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRLALH 124
Query: 123 NYG 125
N+G
Sbjct: 125 NFG 127
>sp|Q5R8G4|NTF2_PONAB Nuclear transport factor 2 OS=Pongo abelii GN=NUTF2 PE=2 SV=1
Length = 127
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E +G +F+ HYY LFDNDR L ++Y S LT+EGQ+F G I K + LPF + +H
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122
I+ D QP P + ++ V G L+ A ED + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPTPDS-CIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
>sp|O42242|NTF2_XENLA Nuclear transport factor 2 OS=Xenopus laevis GN=ntf2 PE=2 SV=1
Length = 127
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E +G +F+ YY FD DR L+ +Y S LT+EGQ++ G I K + LPF + +H
Sbjct: 8 EQIGASFIQQYYQTFDADRTQLAVIYTDASCLTWEGQQYHGKAAIVEKLSLLPFQKIQHS 67
Query: 66 ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL--- 122
I++ D QP P + ++ V G L+ A +D + F Q+F L+ + ++ ND+FRL
Sbjct: 68 ITSQDHQPTPDS-CIISMVVGQLK-ADDDPIMGFHQVF-LLKNIQDAWVCTNDMFRLALH 124
Query: 123 NYG 125
N+G
Sbjct: 125 NFG 127
>sp|Q21735|NTF2_CAEEL Probable nuclear transport factor 2 OS=Caenorhabditis elegans
GN=ran-4 PE=3 SV=1
Length = 133
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 6 ELVGKTFVGHYYHLFD-----NDRASLSSLYQP-TSMLTFEGQKFFGVDDISTKFNQLPF 59
E V K F+ HYY FD + LS LY P S +TFEGQ+ G D I KF L F
Sbjct: 8 ESVAKAFIQHYYSKFDVGDGMSRAQGLSDLYDPENSYMTFEGQQAKGRDGILQKFTTLGF 67
Query: 60 DQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDI 119
+ + I+ IDSQP G + + V G L+ ED FSQ+F L P +GS+ + N+I
Sbjct: 68 TKIQRAITVIDSQPL-YDGSIQVMVLGQLK-TDEDPINPFSQVFILRPNNQGSYFIGNEI 125
Query: 120 FRLN 123
FRL+
Sbjct: 126 FRLD 129
>sp|Q9UKK6|NXT1_HUMAN NTF2-related export protein 1 OS=Homo sapiens GN=NXT1 PE=1 SV=1
Length = 140
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R LS LY T+ L + G G + +S F LP +
Sbjct: 11 DQACRAAEEFVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSE- 69
Query: 63 RHMISTIDSQPC-----PSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGS---FA 114
IS +D QP PS +L+ + GS++ G + F+Q F L S +
Sbjct: 70 -FQISVVDCQPVHDEATPSQTTVLVVICGSVKFEG-NKQRDFNQNFILTAQASPSNTVWK 127
Query: 115 VQNDIFR 121
+ +D FR
Sbjct: 128 IASDCFR 134
>sp|Q9V3H8|NXT1_DROME NTF2-related export protein OS=Drosophila melanogaster GN=Nxt1 PE=2
SV=1
Length = 133
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 9 GKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMIST 68
TF YY DN R + LY + L++ G G I + F +LP H ++T
Sbjct: 16 ADTFTRLYYASVDNRRQQIGRLYLDNATLSWNGNGAIGRQMIESYFQELP--SSNHQLNT 73
Query: 69 IDSQPCPSTG-----GLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122
+D+QP LI SGS++ A D LR Q ++ + V +D +R+
Sbjct: 74 LDAQPIVDQAVSNQLAYLIMASGSVKFA--DQQLRKFQQTFIVTAENDKWKVVSDCYRM 130
>sp|O94260|G3BP_SCHPO Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nxt3 PE=1 SV=1
Length = 434
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 8 VGKTFVGHYYHLFDNDRASLSSLYQPTSMLTF--EGQKF---FGVDDISTKFNQLPFDQC 62
+G FV YY + + L Y S L EG+ G +I K L F C
Sbjct: 18 IGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIHGDEGESISLCHGQQEIHNKILDLDFQNC 77
Query: 63 RHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122
+ +IS +DS S GG++I V G + G+ +F+Q F L P G F V NDIFR
Sbjct: 78 KVLISNVDSL-ASSNGGIVIQVLGEMSNKGKLSR-KFAQTFFLAEQPNGYF-VLNDIFRF 134
>sp|Q9U757|NXT1_CAEEL NTF2-related export protein OS=Caenorhabditis elegans GN=nxt-1 PE=1
SV=1
Length = 137
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 10 KTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTI 69
K F+ YY + D R + LY S + G G D I LP Q H I ++
Sbjct: 21 KKFMDVYYDVMDRKREKIGFLYTQVSNAVWNGNPINGYDSICEFMKALPSTQ--HDIQSL 78
Query: 70 DSQPCPS------TGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFR 121
D+Q P +GG+L+ V+G++ + G D F+Q L+ G + V++D FR
Sbjct: 79 DAQRLPEGVTGDMSGGMLLNVAGAVTVDG-DSKRAFTQTL-LLGVEDGKYKVKSDRFR 134
>sp|Q9QZV9|NXT1_MOUSE NTF2-related export protein 1 OS=Mus musculus GN=Nxt1 PE=1 SV=2
Length = 140
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R LS LY T+ L + G G + +S F LP +
Sbjct: 11 DQACRAAEEFVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSE- 69
Query: 63 RHMISTIDSQPC-----PSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGS---FA 114
IS +D QP PS +L+ + G+++ G + F+Q F L S +
Sbjct: 70 -FQISVVDCQPVHDDATPSQTTVLVVICGTVKFEG-NKQRDFNQNFILTAQASPSNTVWK 127
Query: 115 VQNDIFR 121
+ +D FR
Sbjct: 128 IASDCFR 134
>sp|Q9NPJ8|NXT2_HUMAN NTF2-related export protein 2 OS=Homo sapiens GN=NXT2 PE=2 SV=1
Length = 142
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R +L+ LY + L + G G+D ++ F+ LP
Sbjct: 12 DQACRAAEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGLDALNNFFDTLP--SS 69
Query: 63 RHMISTIDSQPC-----PSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIP--TPRGS-FA 114
++ +D QP S +L+ SG+++ G H F+Q F L TP + +
Sbjct: 70 EFQVNMLDCQPVHEQATQSQTTVLVVTSGTVKFDGNKQHF-FNQNFLLTAQSTPNNTVWK 128
Query: 115 VQNDIFR 121
+ +D FR
Sbjct: 129 IASDCFR 135
>sp|Q2KIW0|NXT1_BOVIN NTF2-related export protein 1 OS=Bos taurus GN=NXT1 PE=2 SV=1
Length = 140
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 4 QTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCR 63
Q + FV YY D R LS LY T+ L + G G + +S F LP +
Sbjct: 12 QACRAAEEFVNVYYSTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSE-- 69
Query: 64 HMISTIDSQPC-----PSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGS---FAV 115
I+ +D QP PS +L+ + G+++ G + F+Q F L S + +
Sbjct: 70 FQINVVDCQPVHDEATPSQTTVLVVICGTVKFEG-NKQRDFNQNFILTAQASPSNTVWKI 128
Query: 116 QNDIFR 121
+D FR
Sbjct: 129 ASDCFR 134
>sp|A6QNX3|NXT2_BOVIN NTF2-related export protein 2 OS=Bos taurus GN=NXT2 PE=2 SV=1
Length = 142
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R +L+ LY + L + G G++ ++ F+ LP +
Sbjct: 12 DQACRAAEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNVVTGLEALANFFDMLPSSE- 70
Query: 63 RHMISTIDSQPC-----PSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGS---FA 114
++ +D QP S +L+ SG+++ G H F+Q F L + +
Sbjct: 71 -FQVNMLDCQPVHEQATQSQTTVLVVTSGTVKFDGNKQHY-FNQNFLLTAQTTANNTVWK 128
Query: 115 VQNDIFR 121
+ +D FR
Sbjct: 129 IASDCFR 135
>sp|Q3UNA4|NXT2_MOUSE NTF2-related export protein 2 OS=Mus musculus GN=Nxt2 PE=2 SV=1
Length = 142
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R +L LY + L + G G++ ++ F LP +
Sbjct: 12 DQACRAAEEFVNIYYETMDKRRHALVRLYLDKATLIWNGNVVTGLEALANFFEMLPSSE- 70
Query: 63 RHMISTIDSQP-------CPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIP--TPRGS- 112
I+ +D QP C +T +L+ SG ++ G H F+Q F L TP +
Sbjct: 71 -FQINMLDCQPVHEQATQCQTT--VLVVTSGVVKFDGNKQHF-FNQNFLLTAQSTPNSTV 126
Query: 113 FAVQNDIFR 121
+ + +D FR
Sbjct: 127 WKIASDCFR 135
>sp|B2GV77|NXT2_RAT NTF2-related export protein 2 OS=Rattus norvegicus GN=Nxt2 PE=2
SV=1
Length = 142
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R +L LY + L + G G++ ++ F LP +
Sbjct: 12 DQACRAAEEFVNIYYETMDKRRHALVRLYLDKATLIWNGNVVTGLEALANFFEMLPSSEF 71
Query: 63 RHMISTIDSQPCPSTG-----GLLIFVSGSLQLAGEDHHLRFSQMFHLIP--TPRGS-FA 114
+ I+ +D QP +L+ SG ++ G H F+Q F L TP + +
Sbjct: 72 Q--INMLDCQPVHEQATQYQTTVLVVTSGVVKFDGNKQHF-FNQNFLLTAQSTPNSTVWK 128
Query: 115 VQNDIFR 121
+ +D FR
Sbjct: 129 IASDCFR 135
>sp|Q5R9L3|G3BP2_PONAB Ras GTPase-activating protein-binding protein 2 OS=Pongo abelii
GN=G3BP2 PE=2 SV=1
Length = 482
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G + +G +DI K L
Sbjct: 10 LVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIP--TPRGSFAVQ 116
F +C I +D+ S G+++ V G L +G+ +F Q F L P + F V
Sbjct: 70 FSECHTKIRHVDAHATLSD-GVVVQVMGLLSNSGQPER-KFMQTFVLAPEGSVPNKFYVH 127
Query: 117 NDIFR 121
ND+FR
Sbjct: 128 NDMFR 132
>sp|Q9UN86|G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2 OS=Homo sapiens
GN=G3BP2 PE=1 SV=2
Length = 482
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G + +G +DI K L
Sbjct: 10 LVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIP--TPRGSFAVQ 116
F +C I +D+ S G+++ V G L +G+ +F Q F L P + F V
Sbjct: 70 FSECHTKIRHVDAHATLSD-GVVVQVMGLLSNSGQPER-KFMQTFVLAPEGSVPNKFYVH 127
Query: 117 NDIFR 121
ND+FR
Sbjct: 128 NDMFR 132
>sp|P97379|G3BP2_MOUSE Ras GTPase-activating protein-binding protein 2 OS=Mus musculus
GN=G3bp2 PE=1 SV=2
Length = 482
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G + +G +DI K L
Sbjct: 10 LVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIP--TPRGSFAVQ 116
F +C I +D+ S G+++ V G L +G+ +F Q F L P + F V
Sbjct: 70 FSECHTKIRHVDAHATLSD-GVVVQVMGLLSNSGQPER-KFMQTFVLAPEGSVPNKFYVH 127
Query: 117 NDIFR 121
ND+FR
Sbjct: 128 NDMFR 132
>sp|Q5ZLH0|NXT2_CHICK NTF2-related export protein 2 OS=Gallus gallus GN=NXT2 PE=2 SV=1
Length = 141
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 11/127 (8%)
Query: 3 DQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQC 62
DQ + FV YY D R +L+ LY + L + G G + ++ F LP +
Sbjct: 12 DQACRAAEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGQEALNEFFEMLPSSE- 70
Query: 63 RHMISTIDSQPC-----PSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGS---FA 114
++ +D QP S +L+ G+++ G F+Q F L + +
Sbjct: 71 -FQVNVLDCQPVHEQATQSQTTVLVVTCGTVKFDGNKQRY-FNQNFLLTAQATSNSTVWK 128
Query: 115 VQNDIFR 121
+ +D FR
Sbjct: 129 IASDCFR 135
>sp|Q32LC7|G3BP1_BOVIN Ras GTPase-activating protein-binding protein 1 OS=Bos taurus
GN=G3BP PE=2 SV=1
Length = 465
Score = 36.2 bits (82), Expect = 0.063, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G +G +I K
Sbjct: 10 LVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHL-RFSQMFHLIP--TPRGSFAV 115
F C I +D+ + G+++ V G L+ + L RF Q F L P + F V
Sbjct: 70 FTNCHTKIRHVDAHATLND-GVVVQVMG--LLSNNNQALRRFMQTFVLAPEGSVANKFYV 126
Query: 116 QNDIFR 121
NDIFR
Sbjct: 127 HNDIFR 132
>sp|Q5RB87|G3BP1_PONAB Ras GTPase-activating protein-binding protein 1 OS=Pongo abelii
GN=G3BP1 PE=2 SV=1
Length = 466
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G +G +I K
Sbjct: 10 LVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHL-RFSQMFHLIP--TPRGSFAV 115
F C I +D+ + G+++ V G L+ + L RF Q F L P + F V
Sbjct: 70 FTNCHTKIRHVDAHATLND-GVVVQVMG--LLSNNNQALRRFMQTFVLAPEGSVANKFYV 126
Query: 116 QNDIFR 121
NDIFR
Sbjct: 127 HNDIFR 132
>sp|Q13283|G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 OS=Homo sapiens
GN=G3BP1 PE=1 SV=1
Length = 466
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G +G +I K
Sbjct: 10 LVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHL-RFSQMFHLIP--TPRGSFAV 115
F C I +D+ + G+++ V G L+ + L RF Q F L P + F V
Sbjct: 70 FTNCHTKIRHVDAHATLND-GVVVQVMG--LLSNNNQALRRFMQTFVLAPEGSVANKFYV 126
Query: 116 QNDIFR 121
NDIFR
Sbjct: 127 HNDIFR 132
>sp|P97855|G3BP1_MOUSE Ras GTPase-activating protein-binding protein 1 OS=Mus musculus
GN=G3bp1 PE=1 SV=1
Length = 465
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58
LVG+ FV YY L + L Y S G +G +I K
Sbjct: 10 LVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQN 69
Query: 59 FDQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHL-RFSQMFHLIP--TPRGSFAV 115
F C I +D+ + G+++ V G L+ + L RF Q F L P + F V
Sbjct: 70 FTNCHTKIRHVDAHATLND-GVVVQVMG--LLSNNNQALRRFMQTFVLAPEGSVANKFYV 126
Query: 116 QNDIFR 121
NDIFR
Sbjct: 127 HNDIFR 132
>sp|O01835|CPB3_CAEEL Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis elegans GN=cpb-3 PE=2 SV=2
Length = 745
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 31/57 (54%)
Query: 1 MEDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQL 57
+ QT+ G+ G+ Y +F+++RA S L++ + + G+ +F + +K ++
Sbjct: 346 LRAQTKYTGQAATGYVYMIFEDERAVASLLHECSQEIGGAGEWYFKIRAQRSKSTEI 402
>sp|P25980|UBF1B_XENLA Nucleolar transcription factor 1-B OS=Xenopus laevis GN=ubtf-b PE=2
SV=1
Length = 701
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHM 65
E+ ++ +G Y F NDRA + + T + + +K + + DQ R+
Sbjct: 430 EIWQQSVIGDYLARFKNDRAKALKVMEATWLNMEKKEKIMWIKKAAE-------DQKRYE 482
Query: 66 --ISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQ 101
+S + S P P+T G + G + A + + +FSQ
Sbjct: 483 RELSDMRSTPAPTTAGKKVKFLGEPKKAPMNGYQKFSQ 520
>sp|Q172G3|MED1_AEDAE Mediator of RNA polymerase II transcription subunit 1 OS=Aedes
aegypti GN=AAEL007402 PE=3 SV=1
Length = 1760
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 27 LSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFD 60
LSS PT+ L+ GQ G +D S FN+LP D
Sbjct: 1483 LSSSSAPTTPLSNVGQSPTGSNDFSLPFNKLPGD 1516
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,876,151
Number of Sequences: 539616
Number of extensions: 1777766
Number of successful extensions: 4037
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3985
Number of HSP's gapped (non-prelim): 44
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)