Query 033171
Match_columns 125
No_of_seqs 117 out of 756
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 17:35:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gy7_A Nuclear transport facto 100.0 1.5E-46 5.1E-51 253.6 14.9 124 1-125 1-124 (125)
2 1zo2_A NTF2, nuclear transport 100.0 1.1E-45 3.9E-50 250.5 15.0 123 1-125 7-129 (129)
3 1gy6_A Nuclear transport facto 100.0 6.5E-45 2.2E-49 246.2 14.3 121 2-125 4-124 (127)
4 3q90_A RAS GTPase-activating p 100.0 3.3E-43 1.1E-47 241.3 12.8 121 2-124 6-136 (140)
5 3ujm_A Rasputin; NTF2-like fol 100.0 2.5E-43 8.7E-48 236.3 11.6 118 4-123 2-120 (120)
6 2qiy_A UBP3-associated protein 100.0 1.1E-42 3.8E-47 242.1 13.4 122 1-124 7-148 (154)
7 3nv0_B NTF2-related export pro 100.0 2.3E-41 7.9E-46 235.3 14.3 117 4-124 32-154 (154)
8 1jkg_A P15; NTF2-like domain, 100.0 1E-39 3.4E-44 224.0 14.6 118 4-124 12-137 (140)
9 1jkg_B TAP; NTF2-like domain, 100.0 3.9E-31 1.3E-35 196.4 13.8 119 2-123 11-168 (250)
10 1q40_B MEX67, mRNA export fact 100.0 2.4E-31 8.2E-36 193.8 12.2 120 2-123 10-207 (219)
11 1of5_A MRNA export factor MEX6 100.0 1.1E-31 3.9E-36 195.7 9.7 119 2-123 7-201 (221)
12 3nv0_A Nuclear RNA export fact 99.9 3.2E-25 1.1E-29 160.2 13.2 118 2-122 9-182 (205)
13 1q42_A MTR2, mRNA transport re 99.9 3.1E-25 1.1E-29 156.4 7.2 105 1-108 21-146 (201)
14 1of5_B MTR2, YKL186C, mRNA tra 99.8 5.8E-20 2E-24 128.2 10.7 102 4-108 14-121 (184)
15 4i4k_A Uncharacterized protein 98.4 5.8E-06 2E-10 55.4 11.1 110 7-118 19-135 (143)
16 3cu3_A Domain of unknown funct 98.1 2.4E-05 8.2E-10 53.5 9.5 112 7-120 16-135 (172)
17 3hx8_A MLR2180 protein, putati 98.1 9.9E-05 3.4E-09 47.2 11.3 114 4-121 3-124 (129)
18 2gxf_A Hypothetical protein YY 98.1 4.2E-05 1.4E-09 50.6 9.5 109 9-119 5-120 (142)
19 3d9r_A Ketosteroid isomerase-l 98.0 0.00013 4.5E-09 47.1 10.9 115 6-123 10-133 (135)
20 3gzr_A Uncharacterized protein 98.0 0.00019 6.6E-09 48.2 11.6 114 7-122 6-129 (146)
21 3rob_A Uncharacterized conserv 97.9 0.00042 1.4E-08 46.3 11.6 112 6-119 16-133 (139)
22 3f7s_A Uncharacterized NTF2-li 97.8 0.00051 1.7E-08 45.1 11.5 116 1-120 2-125 (142)
23 3h51_A Putative calcium/calmod 97.7 0.0011 3.7E-08 44.4 11.7 112 5-122 18-139 (156)
24 3b7c_A Uncharacterized protein 97.6 0.0032 1.1E-07 40.4 12.9 108 7-119 5-119 (122)
25 3duk_A NTF2-like protein of un 97.6 0.002 6.9E-08 42.1 11.3 106 7-122 12-123 (125)
26 3bb9_A Putative orphan protein 97.6 0.00067 2.3E-08 45.1 9.1 110 6-118 29-145 (148)
27 3gwr_A Putative calcium/calmod 97.5 0.00071 2.4E-08 45.3 8.3 108 9-118 10-123 (144)
28 2rfr_A Uncharacterized protein 97.4 0.0024 8.2E-08 42.2 9.9 113 7-123 19-142 (155)
29 2chc_A Protein RV3472; hypothe 97.4 0.0065 2.2E-07 40.9 12.1 115 6-123 13-132 (170)
30 2ux0_A Calcium-calmodulin depe 97.2 0.0057 1.9E-07 39.9 10.2 112 7-121 13-135 (143)
31 3b8l_A Uncharacterized protein 97.2 0.0042 1.4E-07 41.6 9.4 116 6-123 27-152 (163)
32 2r4i_A Uncharacterized protein 97.1 0.0076 2.6E-07 37.9 9.9 110 7-119 6-118 (123)
33 3cnx_A Uncharacterized protein 97.1 0.013 4.5E-07 40.5 11.3 112 6-120 11-153 (170)
34 2rcd_A Uncharacterized protein 97.1 0.025 8.6E-07 36.4 12.0 104 9-119 16-123 (129)
35 3a76_A Gamma-hexachlorocyclohe 97.0 0.0097 3.3E-07 40.7 10.3 116 6-123 30-154 (176)
36 1oh0_A Steroid delta-isomerase 96.9 0.0023 7.8E-08 40.9 5.7 57 1-57 1-60 (131)
37 3soy_A NTF2-like superfamily p 96.8 0.014 4.9E-07 38.8 9.2 109 10-119 13-132 (145)
38 3er7_A Uncharacterized NTF2-li 96.7 0.0015 5.2E-08 43.3 3.9 58 11-68 6-71 (131)
39 3fka_A Uncharacterized NTF-2 l 96.6 0.012 4E-07 38.1 7.6 102 9-122 11-119 (120)
40 3dm8_A Uncharacterized protein 96.5 0.035 1.2E-06 36.3 9.6 93 9-105 6-111 (143)
41 3mg1_A OCP, orange carotenoid 96.3 0.029 1E-06 42.3 9.1 108 8-118 193-304 (323)
42 3h3h_A Uncharacterized snoal-l 96.3 0.0057 1.9E-07 39.0 4.5 63 3-68 5-81 (122)
43 3f7x_A Putative polyketide cyc 96.3 0.025 8.7E-07 37.6 7.8 50 9-58 22-73 (151)
44 3blz_A NTF2-like protein of un 96.2 0.12 4.2E-06 33.1 10.8 107 6-122 11-124 (128)
45 3i0y_A Putative polyketide cyc 96.1 0.088 3E-06 33.7 9.9 50 9-58 10-61 (140)
46 3jum_A Phenazine biosynthesis 96.1 0.069 2.3E-06 37.4 9.7 81 7-90 41-130 (185)
47 1ohp_A Steroid delta-isomerase 96.0 0.026 8.9E-07 35.0 6.7 52 7-58 5-59 (125)
48 2bng_A MB2760; epoxide hydrola 96.0 0.12 4.2E-06 33.7 10.2 52 7-58 15-68 (149)
49 2rgq_A Domain of unknown funct 96.0 0.16 5.6E-06 33.0 12.5 118 1-121 2-126 (144)
50 4h3u_A Hypothetical protein; s 96.0 0.13 4.5E-06 34.0 10.4 48 11-58 29-79 (158)
51 3dmc_A NTF2-like protein; stru 96.0 0.075 2.6E-06 34.6 8.9 55 4-58 9-68 (134)
52 3en8_A Uncharacterized NTF-2 l 95.9 0.17 5.9E-06 32.6 10.5 51 8-58 6-59 (128)
53 3f14_A Uncharacterized NTF2-li 95.8 0.064 2.2E-06 33.6 7.8 90 11-106 4-100 (112)
54 3ef8_A Putative scyalone dehyd 95.7 0.24 8.3E-06 32.5 11.5 114 7-122 11-132 (150)
55 2a15_A Hypothetical protein RV 95.3 0.26 8.8E-06 31.5 9.5 52 7-58 7-68 (139)
56 1z1s_A Hypothetical protein PA 95.3 0.33 1.1E-05 32.3 10.3 49 10-58 26-81 (163)
57 3ff0_A Phenazine biosynthesis 95.2 0.13 4.3E-06 35.4 8.1 99 6-105 18-128 (163)
58 1tp6_A Hypothetical protein PA 95.2 0.34 1.2E-05 31.3 10.7 108 9-119 12-125 (128)
59 2owp_A Hypothetical protein BX 95.1 0.39 1.3E-05 31.2 11.1 104 11-119 15-122 (129)
60 3fh1_A Uncharacterized NTF2-li 95.0 0.056 1.9E-06 34.6 5.6 59 8-68 18-85 (129)
61 3fsd_A NTF2-like protein of un 95.0 0.4 1.4E-05 30.8 10.4 110 9-120 16-130 (134)
62 3mso_A Steroid delta-isomerase 94.8 0.014 4.9E-07 38.7 2.3 53 6-58 8-63 (143)
63 1nww_A Limonene-1,2-epoxide hy 94.6 0.52 1.8E-05 30.3 11.9 50 9-58 24-75 (149)
64 3ff2_A Uncharacterized cystati 94.6 0.45 1.5E-05 29.5 9.3 57 10-68 5-68 (117)
65 2f86_B Hypothetical protein K1 94.5 0.36 1.2E-05 32.0 8.7 109 9-119 14-129 (143)
66 3ec9_A Uncharacterized NTF2-li 94.5 0.1 3.5E-06 33.5 5.8 49 10-58 15-70 (140)
67 3dxo_A Uncharacterized snoal-l 94.4 0.045 1.5E-06 35.0 3.8 62 10-73 6-77 (121)
68 2k54_A Protein ATU0742; protei 94.3 0.37 1.3E-05 30.1 8.2 49 9-57 5-56 (123)
69 3g8z_A Protein of unknown func 94.1 0.19 6.4E-06 33.0 6.6 49 9-57 22-76 (148)
70 3rga_A Epoxide hydrolase; NTF2 94.1 0.19 6.4E-06 37.0 7.2 53 6-58 5-60 (283)
71 3ke7_A Putative ketosteroid is 93.9 0.51 1.7E-05 31.0 8.3 96 22-121 30-128 (134)
72 3rga_A Epoxide hydrolase; NTF2 93.8 0.96 3.3E-05 33.1 10.6 54 5-58 136-192 (283)
73 1s5a_A Hypothetical protein YE 93.6 0.87 3E-05 29.1 11.6 51 8-58 11-68 (150)
74 3ebt_A Uncharacterized NTF2-li 93.4 0.84 2.9E-05 28.6 9.8 49 10-58 6-63 (132)
75 3fgy_A Uncharacterized NTF2-li 93.4 0.085 2.9E-06 33.6 3.8 51 8-58 6-62 (135)
76 3hk4_A MLR7391 protein; NTF2-l 93.1 0.83 2.8E-05 29.9 8.4 94 10-107 23-124 (136)
77 3gzb_A Putative snoal-like pol 93.1 0.18 6.1E-06 33.6 4.9 51 8-58 21-74 (154)
78 1tuh_A BAL32A, hypothetical pr 92.8 0.68 2.3E-05 30.2 7.7 51 7-57 29-85 (156)
79 3grd_A Uncharacterized NTF2-su 92.0 1.2 4.3E-05 27.9 8.0 49 10-58 7-62 (134)
80 2gex_A SNOL; alpha+beta barrel 91.9 0.16 5.3E-06 33.3 3.6 59 8-68 5-68 (152)
81 3ejv_A Uncharacterized protein 91.5 2.3 7.8E-05 28.9 11.5 71 4-74 23-108 (179)
82 3f40_A Uncharacterized NTF2-li 91.4 0.13 4.6E-06 32.5 2.8 50 9-58 8-58 (114)
83 3k0z_A Putative polyketide cyc 91.4 0.94 3.2E-05 30.0 7.1 61 8-68 35-99 (159)
84 3kkg_A Putative snoal-like pol 90.9 0.68 2.3E-05 29.8 5.9 59 9-69 11-78 (146)
85 2gey_A ACLR protein; alpha+bet 90.8 0.36 1.2E-05 31.8 4.5 60 8-68 5-67 (158)
86 3f9s_A Putative polyketide cyc 90.8 0.13 4.4E-06 33.4 2.2 60 8-69 7-77 (146)
87 3f8x_A Putative delta-5-3-keto 90.6 0.24 8.3E-06 33.1 3.5 51 7-57 20-73 (148)
88 3f8h_A Putative polyketide cyc 90.3 1.5 5.2E-05 28.7 7.3 47 11-57 22-70 (150)
89 3ehc_A Snoal-like polyketide c 90.2 0.88 3E-05 28.6 5.9 54 10-68 6-64 (128)
90 3g16_A Uncharacterized protein 87.3 0.63 2.2E-05 31.5 3.8 53 6-58 9-66 (156)
91 1sjw_A Nogalonic acid methyl e 84.3 4.9 0.00017 25.3 6.9 49 9-57 4-55 (144)
92 3g0k_A Putative membrane prote 83.6 7.1 0.00024 25.4 10.0 63 5-68 25-91 (148)
93 2f99_A Aklanonic acid methyl e 83.2 0.18 6.3E-06 33.1 -0.5 50 8-57 12-64 (153)
94 3lyg_A NTF2-like protein of un 82.4 1.6 5.5E-05 28.2 3.7 47 12-58 7-60 (120)
95 3flj_A Uncharacterized protein 74.3 2.5 8.4E-05 28.5 3.0 48 10-57 21-71 (155)
96 2b1x_B Naphthalene dioxygenase 65.9 26 0.00087 23.1 12.9 116 5-122 11-158 (172)
97 3eby_A Beta subunit of A putat 64.7 27 0.00092 22.9 10.2 114 6-121 13-149 (163)
98 2imj_A Hypothetical protein DU 60.0 16 0.00054 24.7 4.5 49 8-56 18-67 (166)
99 3e99_A Benzoate 1,2-dioxygenas 57.1 40 0.0014 22.4 12.9 113 8-122 9-150 (164)
100 2gbw_B Biphenyl 2,3-dioxygenas 50.2 52 0.0018 21.7 12.2 116 5-122 12-160 (174)
101 2ia7_A Tail lysozyme, putative 46.0 55 0.0019 20.8 5.5 52 48-105 77-130 (134)
102 1uli_B Biphenyl dioxygenase sm 42.7 75 0.0025 21.3 13.3 117 5-122 22-173 (187)
103 1pfs_A PF3 SSDBP, PF3 single-s 36.2 66 0.0023 18.9 4.7 29 79-107 2-32 (78)
104 4giw_A RUN and SH3 domain-cont 35.8 8.8 0.0003 26.6 0.3 51 10-60 130-184 (198)
105 3ub1_A ORF13-like protein; NTF 32.8 1.4E+02 0.0048 21.6 9.6 31 6-36 154-185 (261)
106 3j20_S 30S ribosomal protein S 27.0 37 0.0013 19.5 1.9 19 5-23 9-27 (67)
107 3gzx_B Biphenyl dioxygenase su 24.0 1.7E+02 0.0058 19.7 13.2 117 5-122 21-172 (186)
108 1b5f_B Protein (cardosin A); h 23.3 5.4 0.00018 23.5 -2.3 17 8-24 62-78 (87)
109 3hlz_A Uncharacterized protein 22.7 2.2E+02 0.0075 20.6 7.2 65 41-109 51-118 (269)
No 1
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=100.00 E-value=1.5e-46 Score=253.61 Aligned_cols=124 Identities=44% Similarity=0.772 Sum_probs=115.9
Q ss_pred CCCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcE
Q 033171 1 MEDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 1 ~~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~i 80 (125)
|.|++++||+.||++||++||++|+.|++||+++|+++|+|+.+.|+++|.++|.+||+++++|+|+++||||++++++|
T Consensus 1 m~m~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~~s~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~D~qp~~~~~gi 80 (125)
T 1gy7_A 1 MSLDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPYGDV 80 (125)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSCCSCEEEEEEEEEEEESSTTSCE
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHhhCCCcEEEECCcEecCHHHHHHHHHhCCCcceEEEEEEEEEEEecCCCeE
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999556899
Q ss_pred EEEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEeecC
Q 033171 81 LIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125 (125)
Q Consensus 81 lI~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~~~~ 125 (125)
+|+|+|.++.+++.++++|+|||+|+|.+ ++|+|.||+|||++|
T Consensus 81 li~V~G~~~~~~~~~~~~F~qtF~L~p~~-~~~~I~nD~fr~~~~ 124 (125)
T 1gy7_A 81 LVMITGDLLIDEEQNPQRFSQVFHLIPDG-NSYYVFNDIFRLNYS 124 (125)
T ss_dssp EEEEEEEEEETTCSSCEEEEEEEEEEEET-TEEEEEEEEEEEECC
T ss_pred EEEEEEEEEECCCCCCccEeEEEEEEEeC-CEEEEEEEEEEEecC
Confidence 99999999998874599999999999998 799999999999985
No 2
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=100.00 E-value=1.1e-45 Score=250.52 Aligned_cols=123 Identities=41% Similarity=0.824 Sum_probs=116.5
Q ss_pred CCCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcE
Q 033171 1 MEDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 1 ~~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~i 80 (125)
|+|+++++|+.||++||++||++|+.|++||+++|+++|+|+.+.|+++|.++|.+||+++++|+|+++||||+ ++++|
T Consensus 7 ~~p~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~D~qp~-~~~gi 85 (129)
T 1zo2_A 7 LNPQFDQIGKQFVQHYYQTFQTNRPALGGLYGPQSMLTWEDTQFQGQANIVNKFNSLNFQRVQFEITRVDCQPS-PNNGS 85 (129)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHHCCSCEEEEEEEEEEEEC-TBSSE
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEECCceeccHHHHHHHHHhCCCcceEEEEEEEEEEEe-CCCcE
Confidence 47899999999999999999999999999999999999999999999999999999999889999999999999 77899
Q ss_pred EEEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEeecC
Q 033171 81 LIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125 (125)
Q Consensus 81 lI~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~~~~ 125 (125)
+|+|+|.++.++++ +++|+|+|+|+|.++++|+|.||||||++|
T Consensus 86 lI~V~G~~~~~~~~-~~~F~qtF~L~p~~~~~y~I~nD~fR~~~~ 129 (129)
T 1zo2_A 86 IVFVTGDVRIDDGQ-PLKFSQVFNLMPSGNGGFMIFNDLFRLNLG 129 (129)
T ss_dssp EEEEEEEEEETTCC-CEEEEEEEEEEECSSSCEEEEEEEEEEC--
T ss_pred EEEEEEEEEECCCC-cceEEEEEEEEEcCCCcEEEEeEEEEEecC
Confidence 99999999999885 999999999999876899999999999985
No 3
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=100.00 E-value=6.5e-45 Score=246.21 Aligned_cols=121 Identities=37% Similarity=0.658 Sum_probs=116.8
Q ss_pred CCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEE
Q 033171 2 EDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLL 81 (125)
Q Consensus 2 ~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~il 81 (125)
+|+++++|+.||++||++||++|+.|++||+++|+++|+|+.+.|+++|.++|.+||+++++|+|+++||||+ .+++|+
T Consensus 4 ~p~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~d~qp~-~~~~il 82 (127)
T 1gy6_A 4 KPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCII 82 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHCSCSCEEEEEEEEEEEEC-TTSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEECCccccCHHHHHHHHHhCCCcceEEEEEEEEEEEe-CCCcEE
Confidence 7899999999999999999999999999999999999999999999999999999999889999999999999 889999
Q ss_pred EEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEeecC
Q 033171 82 IFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNYG 125 (125)
Q Consensus 82 I~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~~~~ 125 (125)
|+|+|.++.++++ +++|+|||+|+|.+ ++|+|.||+|||+++
T Consensus 83 i~V~G~~~~~~~~-~~~F~qtF~L~p~~-~~~~I~nD~fr~~~~ 124 (127)
T 1gy6_A 83 SMVVGQLKADEDP-IMGFHQMFLLKNIN-DAWVCTNDMFRLALH 124 (127)
T ss_dssp EEEEEEEEETTSC-CEEEEEEEEEEEET-TEEEEEEEEEEECCC
T ss_pred EEEEEEEEECCCC-cceEeEEEEEEEeC-CEEEEEEEEEEEEcc
Confidence 9999999998875 99999999999998 999999999999874
No 4
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=100.00 E-value=3.3e-43 Score=241.33 Aligned_cols=121 Identities=30% Similarity=0.518 Sum_probs=110.1
Q ss_pred CCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEE-----cCc---eecCHHHHHHHHhcCCCCcceEEeEEeeeee
Q 033171 2 EDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTF-----EGQ---KFFGVDDISTKFNQLPFDQCRHMISTIDSQP 73 (125)
Q Consensus 2 ~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~-----~g~---~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~ 73 (125)
+|++++||+.||++||++||++|+.|++||+++|.++| ||+ .+.|+++|.++|.+||+++++|+|.++||||
T Consensus 6 ~p~~~~vg~~Fv~~YY~~ld~~r~~L~~~Y~~~S~l~~~~~~~ng~~~~~~~G~~~I~~~l~~Lp~~~~~~~I~tvD~Qp 85 (140)
T 3q90_A 6 KPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHA 85 (140)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEC----------CCCEEHHHHHHHHHHHTCCCSCEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHhcCHHHHHhhcccCceEEEEccCCCCceeecccCHHHHHHHHHhCCCccceEEEEeEEEEE
Confidence 78999999999999999999999999999999999999 454 6899999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEEEEEcCCCCceeeEEEEEEeeCC--CCcEEEEceeEEeec
Q 033171 74 CPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTP--RGSFAVQNDIFRLNY 124 (125)
Q Consensus 74 ~~~~~~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~~--~~~y~I~nD~fr~~~ 124 (125)
+ .+++|+|+|+|.++.++++ +++|+|+|+|+|++ +++|+|.||||||++
T Consensus 86 s-~~~gilI~V~G~l~~~~~~-~~~F~QtF~L~p~~~~~~~y~V~nDifR~~d 136 (140)
T 3q90_A 86 T-LNDGVVVQVMGLLSNNNQA-LRRFMQTFVLAPEGSVANKFYVHNDIFRYQD 136 (140)
T ss_dssp C-GGGCEEEEEEEEEECTTCC-CEEEEEEEEEEECSSSTTCEEEEEEEEEEGG
T ss_pred e-CCCCEEEEEEEEEecCCCC-ccEEEEEEEEeecCCCCCCEEEEEEEeEeeh
Confidence 9 7889999999999998875 99999999999986 589999999999986
No 5
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=100.00 E-value=2.5e-43 Score=236.31 Aligned_cols=118 Identities=31% Similarity=0.559 Sum_probs=109.8
Q ss_pred CHHHHHHHHHHHHhhccccChhhhcccccCCceEEE-cCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEEE
Q 033171 4 QTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTF-EGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLLI 82 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~-~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~ilI 82 (125)
++++||+.||++||++||++|+.|++||+++|.++| +|+.+.|+++|.++|.+|||++++|+|.++||||+ .+++|+|
T Consensus 2 s~~~vg~~Fv~~YY~~ld~~r~~L~~~Y~~~s~~~~~~~~~~~G~~~I~~~l~~Lpf~~~~~~I~t~D~Qp~-~~~gili 80 (120)
T 3ujm_A 2 SHMSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIHGESKLVVGQREIHNRIQQLNFNDCHAKISQVDAQAT-LGNGVVV 80 (120)
T ss_dssp --CCHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTCCCEESHHHHHHHHHHHCCCSCEEEEEEEEEEEE-GGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHhhhecccceEEEcCCcEecCHHHHHHHHHcCCCcceEEEEecccceEc-CCCCEEE
Confidence 578899999999999999999999999999998776 58999999999999999999999999999999999 7889999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEee
Q 033171 83 FVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 83 ~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
+|+|.++.++++ +++|+|+|+|+|.++++|+|.||||||.
T Consensus 81 ~V~G~l~~~~~~-~r~F~QtF~L~p~~~~~y~V~nDifR~q 120 (120)
T 3ujm_A 81 QVTGELSNDGQP-MRRFTQTFVLAAQSPKKYYVHNDIFRYQ 120 (120)
T ss_dssp EEEEEEESTTCC-CEEEEEEEEEEECSTTCEEEEEEEEEEC
T ss_pred EEEEEEEeCCCC-CceEEEEEEEEEcCCCCEEEEEEEEecC
Confidence 999999999885 8999999999998668999999999983
No 6
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=100.00 E-value=1.1e-42 Score=242.05 Aligned_cols=122 Identities=26% Similarity=0.428 Sum_probs=113.6
Q ss_pred CCCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEEc---------------CceecCHHHHHHHHhcC--CCCcce
Q 033171 1 MEDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFE---------------GQKFFGVDDISTKFNQL--PFDQCR 63 (125)
Q Consensus 1 ~~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~---------------g~~~~G~~~I~~~l~~l--p~~~~~ 63 (125)
|+|++++||+.||++||++||++|+.|++||+++|+++|+ |+.+.|+++|.++|.+| ||++++
T Consensus 7 ~~p~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf~~~~ 86 (154)
T 2qiy_A 7 MGVTVQDICFAFLQNYYERMRTDPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKVRSLK 86 (154)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHHTTEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEccccccccccccccccceEeeCHHHHHHHHHhccCCCCceE
Confidence 7889999999999999999999999999999999999999 89999999999999999 999999
Q ss_pred EEeEEeeeeecCCC--CcEEEEEEEEEEEcCCCCceeeEEEEEEeeCCC-CcEEEEceeEEeec
Q 033171 64 HMISTIDSQPCPST--GGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPR-GSFAVQNDIFRLNY 124 (125)
Q Consensus 64 ~~i~s~D~q~~~~~--~~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~~~-~~y~I~nD~fr~~~ 124 (125)
|+|.++||||+ .+ ++|+|+|+|.++.++++ +|+|+|||+|+|.++ ++|+|.||+|||+.
T Consensus 87 h~I~s~D~q~~-~~~~~~ilI~V~G~~~~~~~~-~r~F~qtFvL~p~~~~~~y~I~ND~fr~~~ 148 (154)
T 2qiy_A 87 LKLDTIDFQYT-GHLHKSILIMATGEMFWTGTP-VYKFCQTFILLPSSNGSTFDITNDIIRFIS 148 (154)
T ss_dssp EEEEEEEEEEE-SGGGCEEEEEEEEEEEETTCC-CEEEEEEEEEEECC---CEEEEEEEEEEEC
T ss_pred EEEEEEEEEEc-cCCCCEEEEEEEEEEEECCCC-CceEEEEEEEEEeCCCCcEEEEEEEEEEEc
Confidence 99999999999 44 89999999999998875 999999999999985 68999999999986
No 7
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=100.00 E-value=2.3e-41 Score=235.30 Aligned_cols=117 Identities=29% Similarity=0.520 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCC------C
Q 033171 4 QTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPS------T 77 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~------~ 77 (125)
++.+||+.||++||++||++|+.|.+||+++|+|+|+|+.+.|+++|.++|.+|| .++|+|.++||||++. +
T Consensus 32 ~a~~vg~~FV~qYY~~~d~~R~~L~~fY~d~S~ls~~g~~~~G~~~I~~~l~~Lp--~~~h~I~s~D~qp~~~~~~~q~~ 109 (154)
T 3nv0_B 32 ELCNESKKFMDVYYDVMDRKREKIGFLYTQVSNAVWNGNPINGYDSICEFMKALP--STQHDIQSLDAQRLPEGVTGDMS 109 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSC--CEEEEEEEEEEEECCTTCCGGGT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHhcCCcEEEECCeecccHHHHHHHHHhCC--CeEEEEEEEEEEEcCccccCCCC
Confidence 4678999999999999999999999999999999999999999999999999999 6999999999999942 6
Q ss_pred CcEEEEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEeec
Q 033171 78 GGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRLNY 124 (125)
Q Consensus 78 ~~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~~~ 124 (125)
++|+|+|+|.++.++++ +++|+|+|+|+|.+ ++|+|.||||||++
T Consensus 110 ~~ilI~V~G~l~~~~~~-~r~F~QtFvL~p~~-~~y~V~NDifR~vd 154 (154)
T 3nv0_B 110 GGMLLNVAGAVTVDGDS-KRAFTQTLLLGVED-GKYKVKSDRFRYVD 154 (154)
T ss_dssp TCEEEEEEEEEEETTSC-CEEEEEEEEEEEET-TEEEEEEEEEEECC
T ss_pred CeEEEEEEEEEEECCCC-ceeEEEEEEEEEeC-CEEEEEeeEEEecC
Confidence 79999999999999886 99999999999998 99999999999985
No 8
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=100.00 E-value=1e-39 Score=223.99 Aligned_cols=118 Identities=30% Similarity=0.516 Sum_probs=109.5
Q ss_pred CHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCC-----CC
Q 033171 4 QTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPS-----TG 78 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~-----~~ 78 (125)
++.++|+.||++||++||++|+.|++||+++|+|+|+|+.+.|+++|.++|.+|| .++|+|.++||||++. ++
T Consensus 12 ~a~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp--~~~h~i~s~d~q~~~~~~~~~~~ 89 (140)
T 1jkg_A 12 QACRAAEEFVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLP--SSEFQISVVDCQPVHDEATPSQT 89 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSC--CEEEEEEEEEEEECCTTTSTTCC
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHhcCCCcEEEECCeeecCHHHHHHHHHhCC--CceeEEEEEEEEEcCCcccCCCC
Confidence 5789999999999999999999999999999999999999999999999999999 5569999999999943 68
Q ss_pred cEEEEEEEEEEEcCCCCceeeEEEEEEeeCC---CCcEEEEceeEEeec
Q 033171 79 GLLIFVSGSLQLAGEDHHLRFSQMFHLIPTP---RGSFAVQNDIFRLNY 124 (125)
Q Consensus 79 ~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~~---~~~y~I~nD~fr~~~ 124 (125)
+|+|+|+|.++.++++ +++|+|||+|+|.+ +++|+|.||+|||+.
T Consensus 90 ~ilI~V~G~~~~~~~~-~r~F~qtF~L~p~~~p~~~~~~I~nD~frl~~ 137 (140)
T 1jkg_A 90 TVLVVICGSVKFEGNK-QRDFNQNFILTAQASPSNTVWKIASDCFRFQD 137 (140)
T ss_dssp EEEEEEEEEEEETTSC-CEEEEEEEEEEEECCSSSCEEEEEEEEEEETT
T ss_pred eEEEEEEEEEEECCCC-ceeeeEEEEEEecCCCCCCeEEEEeeEEEeec
Confidence 9999999999998875 99999999999853 288999999999975
No 9
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=99.97 E-value=3.9e-31 Score=196.37 Aligned_cols=119 Identities=18% Similarity=0.318 Sum_probs=107.6
Q ss_pred CCCHHHHHHHHHHHHhhccccC-hhhhcccccCCceEEEcCc---------------------------------eecCH
Q 033171 2 EDQTELVGKTFVGHYYHLFDND-RASLSSLYQPTSMLTFEGQ---------------------------------KFFGV 47 (125)
Q Consensus 2 ~~~~~~i~~~Fv~~YY~~l~~~-r~~L~~~Y~~~S~~t~~g~---------------------------------~~~G~ 47 (125)
+++++++|+.||++||.++|++ |..|.++|+++|+++|++. ...|+
T Consensus 11 ~~~~~~~~~~Fv~~Yy~~fD~~~R~~L~~lY~~~s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~~G~ 90 (250)
T 1jkg_B 11 TENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTR 90 (250)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSCGGGGGGTEEEEEEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSEESH
T ss_pred CHHHHHHHHHHHHHHHHHHCcCcHHHHHHhhCcCcEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhccCH
Confidence 3467799999999999999998 9999999999999999832 57899
Q ss_pred HHHHHHHhcCCCCcceEEeE--EeeeeecCCCCcEEEEEEEEEEEcC---CCCceeeEEEEEEeeCCCCcEEEEceeEEe
Q 033171 48 DDISTKFNQLPFDQCRHMIS--TIDSQPCPSTGGLLIFVSGSLQLAG---EDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 48 ~~I~~~l~~lp~~~~~~~i~--s~D~q~~~~~~~ilI~V~G~~~~~~---~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
++|.++|.+|| +++|.+. .+||++. .+++++|+|+|.++.++ +..++.|+|||+|.|.++++|+|.||+||+
T Consensus 91 ~~I~~~l~~LP--~t~H~~~s~~vD~~~~-~~~~i~i~V~G~f~e~~~~~~~~~r~F~rtFvL~p~~~~~~~I~ND~l~l 167 (250)
T 1jkg_B 91 LNVVAFLNELP--KTQHDVNSFVVDISAQ-TSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFV 167 (250)
T ss_dssp HHHHHHHTTSC--CEEECGGGCEEEEEEE-CSSCEEEEEEEEEEECSSTTTTCEEEEEEEEEEEECTTSSEEEEEEEEEE
T ss_pred HHHHHHHHhCC--CeeEeccceEEeeeec-CCCEEEEEEEEEEEECCCCCCCCceeeEEEEEEEECCCCcEEEEeeEEEE
Confidence 99999999999 9999999 7999998 66899999999999976 234899999999999866899999999998
Q ss_pred e
Q 033171 123 N 123 (125)
Q Consensus 123 ~ 123 (125)
-
T Consensus 168 ~ 168 (250)
T 1jkg_B 168 R 168 (250)
T ss_dssp E
T ss_pred E
Confidence 4
No 10
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=99.97 E-value=2.4e-31 Score=193.81 Aligned_cols=120 Identities=28% Similarity=0.538 Sum_probs=103.4
Q ss_pred CCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCc---------------------------------------
Q 033171 2 EDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQ--------------------------------------- 42 (125)
Q Consensus 2 ~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~--------------------------------------- 42 (125)
+.+.++++..||++||+++|++|..|..+|+++|+++|.+.
T Consensus 10 ~~~~~~~~~~Fl~~Yy~~fDsdR~~L~~lY~~~S~fS~s~~~~~p~~~~~~~~~~~~~~~~~~Y~~~SRNl~ri~~~~~r 89 (219)
T 1q40_B 10 DEDSRNLATNFIANYLKLWDANRSELMILYQNESQFSMQVDSSHPHLIESGNSGYSGSTDFGYYLNNSRNLTRVSSIKAR 89 (219)
T ss_dssp ---CHHHHHHHHHHHHHHHHSCGGGGGGGCCTTCEEEEEECTTCCCCCCCB------SCCCTTTTTTCCCTTTCCSHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHccCHHHHHHhhccccEEEEEecCCCCccccccccccccccchhhhhhhccchhcccchhhh
Confidence 35678999999999999999999999999999999999852
Q ss_pred ---eecCHHHHHHHHhcCCCCcceEEe------EEeeeeecCCCCcEEEEEEEEEEEcCC--------------------
Q 033171 43 ---KFFGVDDISTKFNQLPFDQCRHMI------STIDSQPCPSTGGLLIFVSGSLQLAGE-------------------- 93 (125)
Q Consensus 43 ---~~~G~~~I~~~l~~lp~~~~~~~i------~s~D~q~~~~~~~ilI~V~G~~~~~~~-------------------- 93 (125)
...|+++|.++|.+|| +++|++ .++|||+.|..++++|+|+|.++..+.
T Consensus 90 ~~~l~~G~~~I~~~l~~LP--kT~H~l~~~~~s~~vD~~~~p~~~~ilitV~G~f~e~~~~~~~~~~~~~~~~~~~~~~~ 167 (219)
T 1q40_B 90 MAKLSIGQEQIYKSFQQLP--KTRHDIIATPELFSMEVYKFPTLNGIMITLHGSFDEVAQPEVDGSASSAPSGPRGGSRY 167 (219)
T ss_dssp HHTCEEHHHHHHHHHHTSC--EEECCTTTCGGGCEEEEEECSSTTCEEEEEEEEEEEEECCSSCCCC----------CCS
T ss_pred hhhhccCHHHHHHHHHHCC--CeeEecccCCCceEEEeEecCCCCeEEEEEEEEEEECCCcccccccccccccccccccc
Confidence 5679999999999999 999999 589999875568999999999998653
Q ss_pred ----------CCceeeEEEEEEeeCCCCcEEEEceeEEee
Q 033171 94 ----------DHHLRFSQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 94 ----------~~~~~F~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
..++.|+|||+|.|.++++|+|.||+||+-
T Consensus 168 ~~~~~~~~~~~~~rsF~RtFvL~P~~~~~~~I~nD~l~ir 207 (219)
T 1q40_B 168 HSGPKHKRIPLSKKSFDRTFVVIPGPNGSMIVASDTLLIR 207 (219)
T ss_dssp SSSSCCCCCCCCCEEEEEEEEEECC---CCEEEEEEEEEE
T ss_pred ccccccccccCCccceEEEEEEEECCCCcEEEEeeEEEEe
Confidence 248999999999999668999999999974
No 11
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=99.97 E-value=1.1e-31 Score=195.69 Aligned_cols=119 Identities=22% Similarity=0.501 Sum_probs=105.1
Q ss_pred CCCHHHHHHHHHHHHhhccccChhhhcccccCCceEEEcCc---------------------------------------
Q 033171 2 EDQTELVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFEGQ--------------------------------------- 42 (125)
Q Consensus 2 ~~~~~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~g~--------------------------------------- 42 (125)
+.+.+++++.||++||+++|++|..|..+|+++|+|+|.+.
T Consensus 7 d~~~~~~~~~Fv~~Yy~~fDsdR~~L~~lY~~~S~fS~s~~~~~p~~~~~~~~~~~~~~~Y~~~SRNl~ri~~~~~r~~~ 86 (221)
T 1of5_A 7 NDALGQSSTDFATNFLNLWDNNREQLLNLYSPQSQFSVSVDSTIPPSTVTDSDQTPAFGYYMSSSRNISKVSSEKSIQQR 86 (221)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEEEECCC-------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHccCHHHHHHhhCcCcEEEEEecCCCCcccccccccccchhhhhhhccchhcccchhhhhhh
Confidence 45688999999999999999999999999999999999872
Q ss_pred eecCHHHHHHHHhcCCCCcceEEe------EEeeeeecCCCCcEEEEEEEEEEEcCCC----------------------
Q 033171 43 KFFGVDDISTKFNQLPFDQCRHMI------STIDSQPCPSTGGLLIFVSGSLQLAGED---------------------- 94 (125)
Q Consensus 43 ~~~G~~~I~~~l~~lp~~~~~~~i------~s~D~q~~~~~~~ilI~V~G~~~~~~~~---------------------- 94 (125)
...|+++|.++|.+|| +++|++ .++||||.+..++++|+|+|.++..+.+
T Consensus 87 l~~G~~~I~~~l~~LP--kT~H~l~~~~~s~~vD~~~~~~~~~i~itV~G~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (221)
T 1of5_A 87 LSIGQESINSIFKTLP--KTKHHLQEQPNEYSMETISYPQINGFVITLHGFFEETGKPELESNKKTGKNNYQKNRRYNHG 164 (221)
T ss_dssp -CBHHHHHHHHHHHSC--CEEECTTTSGGGCEEEEEEEGGGTEEEEEEEEEEEEC-------------------------
T ss_pred hccCHHHHHHHHHhCC--CeeEecccCCCceEEEeEEcCCCCeEEEEEEEEEEECCCccccccccccccccccccccccc
Confidence 5679999999999999 999999 5899999954479999999999987653
Q ss_pred ---------CceeeEEEEEEeeCCCCcEEEEceeEEee
Q 033171 95 ---------HHLRFSQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 95 ---------~~~~F~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
.++.|+|||+|.|. +++|+|.||+||+-
T Consensus 165 ~~~~~~~~~~~rsF~RTFvL~P~-~~~~~I~nD~l~ir 201 (221)
T 1of5_A 165 YNSTSNNKLSKKSFDRTWVIVPM-NNSVIIASDLLTVR 201 (221)
T ss_dssp ----CCSCCEEEEEEEEEEEEEE-TTEEEEEEEEEEEE
T ss_pred ccccccccCCccceEEEEEEEec-CCeEEEEeeEEEee
Confidence 47999999999999 59999999999973
No 12
>3nv0_A Nuclear RNA export factor 2; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=99.93 E-value=3.2e-25 Score=160.20 Aligned_cols=118 Identities=25% Similarity=0.404 Sum_probs=101.3
Q ss_pred CCCHHHHHHHHHHHHhhccccC-----hhhhccccc-CCceEEEc----C------------------------------
Q 033171 2 EDQTELVGKTFVGHYYHLFDND-----RASLSSLYQ-PTSMLTFE----G------------------------------ 41 (125)
Q Consensus 2 ~~~~~~i~~~Fv~~YY~~l~~~-----r~~L~~~Y~-~~S~~t~~----g------------------------------ 41 (125)
+.+..+++..|+++||..+|++ |..|..+|+ ++|+++.. .
T Consensus 9 s~~~~~~v~~Fl~~yf~~yD~~d~~~~R~~Ll~~Y~~~~a~FSltv~~~~~p~~~~~~~~~~~~~~Y~~~SRNl~k~~~~ 88 (205)
T 3nv0_A 9 SDEVRTLVEEFIITYYKIYDGADGQQTRKQLLDAYDTNNSTFTHTVVCLWDPIKFVMYPDSESYRMYLRTSHNVLNQEYF 88 (205)
T ss_dssp SHHHHHHHHHHHHHHHHHHCSTTHHHHGGGGGGGBCSSSCEEEEEEECCCCSSSCCCCSCHHHHHHHHHTCCCGGGCCTT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHhhCccCcEEEEEecCCCCcccccccccccchhhhhhhcccccccccc
Confidence 3467889999999999999986 999999999 68886531 0
Q ss_pred ------ceecCHHHHHHHHhcCCCCcceEEeEE--eeeeecCCCCcEEEEEEEEEEEc--------CCCCceeeEEEEEE
Q 033171 42 ------QKFFGVDDISTKFNQLPFDQCRHMIST--IDSQPCPSTGGLLIFVSGSLQLA--------GEDHHLRFSQMFHL 105 (125)
Q Consensus 42 ------~~~~G~~~I~~~l~~lp~~~~~~~i~s--~D~q~~~~~~~ilI~V~G~~~~~--------~~~~~~~F~qtF~L 105 (125)
....|+++|.++|.+|| +++|.+.+ +||||. ++++++|+|+|.++.. ++..++.|+|||+|
T Consensus 89 ~~~r~~~L~~G~~~I~~~L~~LP--~T~H~~~s~~vD~~p~-~~~~l~i~V~G~f~e~~~~~~~~~~~~~~r~FsRtFiL 165 (205)
T 3nv0_A 89 AANRASRISHGAMDIVVALSRLP--ATIHLMDTFVVDVFLV-SATLLGFTLHGTFRDGPSAIKPENTEEHDNYFTRTFMV 165 (205)
T ss_dssp TTSSCCSCEEHHHHHHHHHHHSC--CEEECGGGCEEEEEEE-CSSCEEEEEEEEEEETHHHHSCCSCSTTCEEEEEEEEE
T ss_pred HHHHHHHHhhCHHHHHHHHHhCC--CeEEecCceEEEEEEe-CCCeEEEEEEEEEEEcccccccccCCCCCceeEEEEEE
Confidence 03479999999999999 99999996 899999 6688999999999986 13358999999999
Q ss_pred eeCCCCcEEEEceeEEe
Q 033171 106 IPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 106 ~~~~~~~y~I~nD~fr~ 122 (125)
.|.++|+|+|.||++-+
T Consensus 166 ~P~~~g~~~I~ND~L~I 182 (205)
T 3nv0_A 166 APRGEGKVAIVSDQLFI 182 (205)
T ss_dssp EECSTTCEEEEEEEEEE
T ss_pred EECCCCcEEEEecEEEe
Confidence 99877999999999864
No 13
>1q42_A MTR2, mRNA transport regulator MTR2; NTF2-fold, nuclear export, translation; 1.75A {Candida albicans} SCOP: d.17.4.2 PDB: 1q40_A
Probab=99.92 E-value=3.1e-25 Score=156.42 Aligned_cols=105 Identities=16% Similarity=0.258 Sum_probs=92.7
Q ss_pred CCCCHHHHHHHHHHHHhhccccChh-----hhc------ccc----cCCceEEEcCcee------cCHHHHHHHHhcCCC
Q 033171 1 MEDQTELVGKTFVGHYYHLFDNDRA-----SLS------SLY----QPTSMLTFEGQKF------FGVDDISTKFNQLPF 59 (125)
Q Consensus 1 ~~~~~~~i~~~Fv~~YY~~l~~~r~-----~L~------~~Y----~~~S~~t~~g~~~------~G~~~I~~~l~~lp~ 59 (125)
||-+..+.|+.|++.||..||+.|. .|. ++| .++|.++|||+++ .|+++|+++|..||
T Consensus 21 mn~~~~r~aE~F~K~yyasLD~~r~~~~~~ql~~v~~f~~ly~~~l~~~a~liwNGnp~~~~~~~~gr~~fqk~w~~lP- 99 (201)
T 1q42_A 21 MNQDPTQQLEPFLKRFLASLDLLYTQPTSQPFPNVESYATQLGSNLKRSSAIIVNGQPIIPSPQEDCKLQFQKKWLQTP- 99 (201)
T ss_dssp --CCGGGTHHHHHHHHHHHHSCCCCCCTTCSSCCHHHHHTTTTTTEEEEEEEEETTEECCCCSSCCHHHHHHHHHHTSC-
T ss_pred cCCCcchhHHHHHHHHHHHhcccccccchhhccchhHHHHHhccccCCccEEEEcCcccccccccccHHHHHHHHHhCC-
Confidence 6678999999999999999999886 777 888 7889999999999 99999999999999
Q ss_pred CcceEEeEEeeeeecCCCCcEEEEEEEEEEEcCCCCceeeEEEEEEeeC
Q 033171 60 DQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPT 108 (125)
Q Consensus 60 ~~~~~~i~s~D~q~~~~~~~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~ 108 (125)
.++|.+.++||||++..+.++|.|+|.|++++++ .++|.|+|.|.+.
T Consensus 100 -~SqHqL~SlDahpIpGq~T~lI~asGkVrFDesg-r~~fgQsf~Lta~ 146 (201)
T 1q42_A 100 -LSSHQLTSYDGHLIPGTGTFVVHFSAKVRFDQSG-RNRLGESADLFQE 146 (201)
T ss_dssp -CEEEEEEEEEEEEETTTTEEEEEEEEEEEEBCSS-CCTTSCCC-----
T ss_pred -CcceeeeeeecceeCCCcEEEEEEeEEEEECCCC-cCcCCCcEEEecc
Confidence 9999999999999977789999999999999997 9999999999865
No 14
>1of5_B MTR2, YKL186C, mRNA transport regulator MTR2; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=99.82 E-value=5.8e-20 Score=128.21 Aligned_cols=102 Identities=14% Similarity=0.207 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHhhccccCh-----hhhcccccCCceEEEcCceecCHHHHHHHHh-cCCCCcceEEeEEeeeeecCCC
Q 033171 4 QTELVGKTFVGHYYHLFDNDR-----ASLSSLYQPTSMLTFEGQKFFGVDDISTKFN-QLPFDQCRHMISTIDSQPCPST 77 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~~r-----~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~-~lp~~~~~~~i~s~D~q~~~~~ 77 (125)
.-.++|+.||++||..||..| ..+..|+.+.|.+++||+++.++.+.++.|. ++| .++|+|+++|||-+++.
T Consensus 14 ~~~~aae~FVk~~y~aLd~~r~~~l~~~lssF~p~~~~Ii~NG~p~a~p~~fqeiw~~Q~p--~T~hel~S~D~HVIngs 91 (184)
T 1of5_B 14 NQAQITATFTKKILAHLDDPDSNKLAQFVQLFNPNNCRIIFNATPFAQATVFLQMWQNQVV--QTQHALTGVDYHAIPGS 91 (184)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCC-CHHHHTTBCSS-CCEEETTEEESCHHHHHHHHHHHSC--CCEEEEEEEEEEEETTT
T ss_pred cchhHHHHHHHHHHHHhcccccchhhhhhhhcCCCCceEEECCeEcCCHHHHHHHHHhcCC--CceEEEEeEEEEEECCC
Confidence 456899999999999999988 8888898888899999999999999999998 899 89999999999999878
Q ss_pred CcEEEEEEEEEEEcCCCCceeeEEEEEEeeC
Q 033171 78 GGLLIFVSGSLQLAGEDHHLRFSQMFHLIPT 108 (125)
Q Consensus 78 ~~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~ 108 (125)
++++|+|+|.|+++++. .-+|.|+|+|.|+
T Consensus 92 gsivv~VsgkVRFdEsg-rd~fgEtfvLvpn 121 (184)
T 1of5_B 92 GTLICNVNCKVRFDESG-RDKMGQDATVPIQ 121 (184)
T ss_dssp TEEEEEEEEEEECC-----------------
T ss_pred CeEEEEEEEEEEECCCC-CCCCCCeEEECCC
Confidence 89999999999998875 4689999999987
No 15
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=98.40 E-value=5.8e-06 Score=55.42 Aligned_cols=110 Identities=15% Similarity=0.242 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcC---CCCcceEEeEEeeeeecCCCCcEEE
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQL---PFDQCRHMISTIDSQPCPSTGGLLI 82 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~D~q~~~~~~~ilI 82 (125)
+.-...+..|+..++. +.+.|..+|.+++.+...|....|+++|.+.+... ++....+.+...+.... .++..++
T Consensus 19 ~~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~A~v 97 (143)
T 4i4k_A 19 AAVAALPARIVAAWADHDADRFADVFAEDGTMILPGLFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDARLL-GDGIALL 97 (143)
T ss_dssp HHHHTHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhhcCceEEeCCCeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEEEEc-CCCEEEE
Confidence 3456788999999986 68999999999999988898899999999988653 22355556665555554 3344444
Q ss_pred EEEEEEEEcCCC---CceeeEEEEEEeeCCCCcEEEEce
Q 033171 83 FVSGSLQLAGED---HHLRFSQMFHLIPTPRGSFAVQND 118 (125)
Q Consensus 83 ~V~G~~~~~~~~---~~~~F~qtF~L~~~~~~~y~I~nD 118 (125)
...|.+..++.. ..+.+.+|+++.+.+ ++|.|...
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~~~T~v~~r~~-g~WrI~~~ 135 (143)
T 4i4k_A 98 ITEGGILAPGETEASGDGAVRASWLAVEQD-GQWRLAAY 135 (143)
T ss_dssp EEEEEEECTTCSSCCGGGEEEEEEEEEEET-TEEEEEEE
T ss_pred EeccceecCCCCCCCcccceEEEEEEEEEC-CcEEEEEe
Confidence 455556555542 135678899999888 89999864
No 16
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=98.12 E-value=2.4e-05 Score=53.54 Aligned_cols=112 Identities=11% Similarity=0.095 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEE-cCceecCHHHHHHHHhcC---CCCcceEEeEEeeeeecCCCCcEE
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF-EGQKFFGVDDISTKFNQL---PFDQCRHMISTIDSQPCPSTGGLL 81 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~-~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~D~q~~~~~~~il 81 (125)
+.-...+..|+..++. +.+.+..+|.+++.+.. .|....|+++|.+.+... ++....+.+...+.... .++..+
T Consensus 16 ~aI~~~~~~~~~A~~~~D~d~~~~lfa~Da~~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~d~A~ 94 (172)
T 3cu3_A 16 SAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFV-NSQLAL 94 (172)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCeEEEeCCCCeEECHHHHHHHHHHHhhccCCCcEEEEEEeEEEEe-CCCEEE
Confidence 4456789999999986 78999999999999875 788999999999987663 22234444444444433 233444
Q ss_pred EEEEEEEEEcCCC---CceeeEEEEEEeeCCCCcEEEEceeE
Q 033171 82 IFVSGSLQLAGED---HHLRFSQMFHLIPTPRGSFAVQNDIF 120 (125)
Q Consensus 82 I~V~G~~~~~~~~---~~~~F~qtF~L~~~~~~~y~I~nD~f 120 (125)
+...+.+...+.. .......++++.+.+ |+|.|...-.
T Consensus 95 v~~~~~~~~~g~~~~~~~~~~~~t~v~~r~d-G~WrI~~~~~ 135 (172)
T 3cu3_A 95 MLVVIRVILPGQTETSASRDSLPLYVVTKGD-EGWQIEGLLN 135 (172)
T ss_dssp EEEEEEEECTTCSSBCGGGCBCCEEEEEEET-TEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCcCCccceEEEEEEEEeC-CeEEEEEEEc
Confidence 4455556655431 124456677777776 9999987644
No 17
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=98.08 E-value=9.9e-05 Score=47.21 Aligned_cols=114 Identities=14% Similarity=0.152 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC-ceecCHHHHHHHHhcCCC-CcceEEeEEeeeeecCCCCcE
Q 033171 4 QTELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-QKFFGVDDISTKFNQLPF-DQCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l~~lp~-~~~~~~i~s~D~q~~~~~~~i 80 (125)
+.++.-...+..|+..++. +.+.|..+|.+++.+...+ ..+.|+++|.+.+..+.- ....|.+...+.... . +..
T Consensus 3 ~~~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~v~~~-g-d~A 80 (129)
T 3hx8_A 3 SAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDMGISELKLTTLDVQES-G-DFA 80 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHHTTCEEEEEEEEEEEEE-T-TEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHhCCCceEEEEEEEEEcC-C-CEE
Confidence 5667778899999999986 6899999999999986543 568999999998876421 125566766666543 2 222
Q ss_pred EEEEEEEEEEc---CCCCce--eeEEEEEEeeCCCCcEEEEceeEE
Q 033171 81 LIFVSGSLQLA---GEDHHL--RFSQMFHLIPTPRGSFAVQNDIFR 121 (125)
Q Consensus 81 lI~V~G~~~~~---~~~~~~--~F~qtF~L~~~~~~~y~I~nD~fr 121 (125)
+ +.|.+... ....+. .-.-+.++.+.++|+|.|..|.+-
T Consensus 81 ~--~~~~~~~~~~~~~G~~~~~~g~~~~v~~r~~dG~W~i~~~~~~ 124 (129)
T 3hx8_A 81 F--ESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWN 124 (129)
T ss_dssp E--EEEEEEEEEECTTSCEEEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred E--EEEEEEEEeeCCCCCeeeeeEEEEEEEEECCCCcEEEEEeecc
Confidence 2 23332221 111122 223455666673499999999874
No 18
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=98.06 E-value=4.2e-05 Score=50.64 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=68.1
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEE-EcCceecCHHHHHHHHhcCCC---CcceEEeEEeeeeecCCCCcEEEE
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLT-FEGQKFFGVDDISTKFNQLPF---DQCRHMISTIDSQPCPSTGGLLIF 83 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t-~~g~~~~G~~~I~~~l~~lp~---~~~~~~i~s~D~q~~~~~~~ilI~ 83 (125)
-...+..|+..++. +.+.+..+|.+++.+. ..|.+..|+++|.+.+..+.- ......+..+..... . +..++.
T Consensus 5 I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~-g-d~A~~~ 82 (142)
T 2gxf_A 5 LKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEA-G-DTVLVL 82 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEE-T-TEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEc-C-CEEEEE
Confidence 45678899999986 7899999999999885 457889999999999986431 123344445555444 2 333333
Q ss_pred EEEEEEE--cCCCCceeeEEEEEEeeCCCCcEEEEcee
Q 033171 84 VSGSLQL--AGEDHHLRFSQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 84 V~G~~~~--~~~~~~~~F~qtF~L~~~~~~~y~I~nD~ 119 (125)
....+.. ++.+....-.-++++.+..+|+|.|.-|.
T Consensus 83 ~~~~~~~~~~G~~~~~~g~~t~v~~r~~dG~Wri~~d~ 120 (142)
T 2gxf_A 83 SQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDN 120 (142)
T ss_dssp EEEECCC---------EEEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEECCCCCeEeeeEEEEEEEEECCCCCEEEEEEC
Confidence 3322221 12211122234777878544899998774
No 19
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=98.01 E-value=0.00013 Score=47.07 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc-eecCHHHHHHHHhcCC--CC-cceEEeEEeeeeecCCCCcE
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ-KFFGVDDISTKFNQLP--FD-QCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~-~~~G~~~I~~~l~~lp--~~-~~~~~i~s~D~q~~~~~~~i 80 (125)
.+.....+..|+..++. +.+.+..+|.+++.+...|. +..|+++|.+.+..+. +. ...+.+..+ ... .++..
T Consensus 10 ~~~i~~~~~~~~~a~~~~D~~~~~~l~a~D~v~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i--~~~-~gd~a 86 (135)
T 3d9r_A 10 LAVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIKEV--VQT-SADWA 86 (135)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEE--EEE-ETTEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCcccCHHHHHHHHHHHHhhcCCceeEEEEEE--EEe-cCCEE
Confidence 34567889999999986 68999999999998876654 5569999999888753 10 222233333 221 12223
Q ss_pred EEEE--EEEEEEcCCCCc--eeeEEEEEEeeCCCCcEEEEceeEEee
Q 033171 81 LIFV--SGSLQLAGEDHH--LRFSQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 81 lI~V--~G~~~~~~~~~~--~~F~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
++.. .|.+.......+ ....-++++.+..+|+|.|..+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~dG~W~i~~~~~s~~ 133 (135)
T 3d9r_A 87 FVRSATEGTETNKATGVVTPAAYQELFLLRKSATGSWQTARYCTSKI 133 (135)
T ss_dssp EEEEEEEEEEEETTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCCCceeecccEEEEEEecCCCcEEEEEEeeccc
Confidence 3322 233333212112 234557778777239999999998754
No 20
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=97.98 E-value=0.00019 Score=48.19 Aligned_cols=114 Identities=13% Similarity=0.262 Sum_probs=76.6
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEE-EcCceecCHHHHHHHHhcC---CCCcceEEeEEeeeeecCCCCcEE
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLT-FEGQKFFGVDDISTKFNQL---PFDQCRHMISTIDSQPCPSTGGLL 81 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t-~~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~D~q~~~~~~~il 81 (125)
..-..++..|...++. +.+.+..+|.+++.+. ..|....|+++|.+.+... +++...+.+...+.... .++..+
T Consensus 6 ~aI~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~D~A~ 84 (146)
T 3gzr_A 6 DAIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTI-APGSAL 84 (146)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEc-CCCEEE
Confidence 3457788999999986 7899999999999987 7788899999999977542 23344555555555444 233333
Q ss_pred EEEEEEEE----EcCCC-CceeeEEEEEEeeCCCCcEEEEceeEEe
Q 033171 82 IFVSGSLQ----LAGED-HHLRFSQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 82 I~V~G~~~----~~~~~-~~~~F~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
+.+...+. .++.. +......++++.+.+ |+|.|...--..
T Consensus 85 v~~~~~l~g~~~~~G~~~~~~~~~~t~v~vr~d-g~WrI~a~h~s~ 129 (146)
T 3gzr_A 85 AVVTLIQDAYVTPDGRQMPRAHDRLTLLAVERE-GVWRFIHGHNTI 129 (146)
T ss_dssp EEEEEEECCEECTTCCEECCEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEEEEecceeCCCCCcCCccCcEEEEEEEEEC-CEEEEEEEeccc
Confidence 33332331 12221 014578899998887 999999876544
No 21
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=97.87 E-value=0.00042 Score=46.29 Aligned_cols=112 Identities=14% Similarity=0.084 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCc--ceEEeEEeeeeecCCCCcEEE
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQ--CRHMISTIDSQPCPSTGGLLI 82 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~--~~~~i~s~D~q~~~~~~~ilI 82 (125)
++..+..+..|+..++. +.+.|..+|.+++.+...|.+..|+++|.+.+...- +. .....+..+++.. .+-.++.
T Consensus 16 e~aI~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g~~~~Gr~ai~a~~~~~~-~~~~~~~~~~~~~i~v~-GD~A~~~ 93 (139)
T 3rob_A 16 ELAIRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGRLPFGKEEFLAACEQND-QRVIIEASATFEEIVIV-EPMAYTR 93 (139)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCBCHHHHHHHHHHHH-HHEEEEEEEEEEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCCCCccCHHHHHHHHHHHH-HhcCCCCceEEEEEEEc-CCeEEEE
Confidence 56678889999999985 789999999999999888888779999999875421 11 1222333344444 3322222
Q ss_pred E-EEEEEEEcCCCCceee--EEEEEEeeCCCCcEEEEcee
Q 033171 83 F-VSGSLQLAGEDHHLRF--SQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 83 ~-V~G~~~~~~~~~~~~F--~qtF~L~~~~~~~y~I~nD~ 119 (125)
. ..+..+..+...+..+ ...+++.++.+|+|.|.-|.
T Consensus 94 ~~~~~~~t~~~~g~~~~~~g~~~~v~rK~~dG~W~i~~d~ 133 (139)
T 3rob_A 94 THLHIKVTPRSGGAVRELAGHAMSIFRRSMFGEWQLARDA 133 (139)
T ss_dssp EEEEEEEEETTSCCCEEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEEecCCCCceeEeeccEEEEEEECCCCcEEEEEEh
Confidence 1 1223333222123333 36778888565999999886
No 22
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=97.83 E-value=0.00051 Score=45.08 Aligned_cols=116 Identities=9% Similarity=0.068 Sum_probs=74.6
Q ss_pred CCCCHHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC--ceecCHHHHHHHHh----cCCCCcceEEeEEeeeee
Q 033171 1 MEDQTELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG--QKFFGVDDISTKFN----QLPFDQCRHMISTIDSQP 73 (125)
Q Consensus 1 ~~~~~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g--~~~~G~~~I~~~l~----~lp~~~~~~~i~s~D~q~ 73 (125)
|.++.++.-...+..|+..+++ +.+.+..+|.+++.+.-.+ ....|+++|.+.+. ..| ....+++..+..+.
T Consensus 2 m~~~~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~D~v~~~~~~~~~~~G~~air~~~~~~~~~~~-~~~~~~~~~~~v~~ 80 (142)
T 3f7s_A 2 MSTAAESEIRQLIERWMQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCT-GPMVFELAQLTVHA 80 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCC-SCEEEEEEEEEEEE
T ss_pred CChhhHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHHhCC-CceEEEEeeeEEEE
Confidence 6666777788999999999986 7899999999998764332 34579999988764 333 24556776666554
Q ss_pred cCCCCcEEEEEEEEEEEcC-CCCceeeEEEEEEeeCCCCcEEEEceeE
Q 033171 74 CPSTGGLLIFVSGSLQLAG-EDHHLRFSQMFHLIPTPRGSFAVQNDIF 120 (125)
Q Consensus 74 ~~~~~~ilI~V~G~~~~~~-~~~~~~F~qtF~L~~~~~~~y~I~nD~f 120 (125)
. .+ ..++...-.+.... .......--|+++.+.+ |+|.|..+=.
T Consensus 81 ~-gd-~A~~~~~~~~~~~~~~g~~~~~r~T~v~~r~~-g~W~ivh~H~ 125 (142)
T 3f7s_A 81 A-GD-LALAHWLNRCGPGDDESQCGFMRATVGYRRQG-GQWQVIHEHW 125 (142)
T ss_dssp E-TT-EEEEEEEEEEEESSCGGGCEEEEEEEEEEEET-TEEEEEEEEE
T ss_pred c-CC-EEEEEEEEEEeeecCCCcceeeEEEEEEEEeC-CEEEEEEEee
Confidence 4 33 22222222333221 11234455677787877 9999986543
No 23
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=97.70 E-value=0.0011 Score=44.41 Aligned_cols=112 Identities=10% Similarity=0.111 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEE--cCceecCHHHHHHHHhcCCCC--cceEEeEEeeeeecCCCCc
Q 033171 5 TELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF--EGQKFFGVDDISTKFNQLPFD--QCRHMISTIDSQPCPSTGG 79 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~--~g~~~~G~~~I~~~l~~lp~~--~~~~~i~s~D~q~~~~~~~ 79 (125)
.++--...+..|+..++. +.+.|..+|.+++.+.. .|....|+++|.+.+..+.-. ........+ +.. .++.
T Consensus 18 d~~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i--~~~-~gd~ 94 (156)
T 3h51_A 18 EAREVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTV--RLL-DDDS 94 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEE--EEC-SSSE
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEE--EEe-cCCe
Confidence 345567788899999985 78999999999997753 345689999999988764210 222222222 222 2222
Q ss_pred EEEEEEEEEEEc---CCCCc--eeeEEEEEEeeCCCCcEEEEceeEEe
Q 033171 80 LLIFVSGSLQLA---GEDHH--LRFSQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 80 ilI~V~G~~~~~---~~~~~--~~F~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
. .+.|..... .+..+ ..--.|+++.+.+ |+|.|..+-...
T Consensus 95 A--~~~~~~~~~~~~~~G~~~~~~~r~t~v~~r~d-G~WkIv~~H~S~ 139 (156)
T 3h51_A 95 A--VDAGVYTFTLTDKNGKKSDVQARYTFVYEKRD-GKWLIINHHSSA 139 (156)
T ss_dssp E--EEEEEEEEEEECTTSCEEEEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred E--EEEEEEEEEEEcCCCCeEEEEeEEEEEEEEEC-CEEEEEEEeecC
Confidence 2 234443321 12112 2335566777776 999999876654
No 24
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=97.64 E-value=0.0032 Score=40.42 Aligned_cols=108 Identities=13% Similarity=0.047 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhhcccc-Chhhhcccc--cCCceEEEcCceecCHHHHHHHHhc-CC--CCcceEEeEEeeeeecCCCCcE
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLY--QPTSMLTFEGQKFFGVDDISTKFNQ-LP--FDQCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y--~~~S~~t~~g~~~~G~~~I~~~l~~-lp--~~~~~~~i~s~D~q~~~~~~~i 80 (125)
+--..-++.++..+++ +.+.+..+| .++..+...+....|.++|.+.+.. ++ +......+...+.+.. .++..
T Consensus 5 ~~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~~~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~~-~~~~a 83 (122)
T 3b7c_A 5 DDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKML-SNYAA 83 (122)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSSCEEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEE-ETTEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCCccccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEEc-CCCEE
Confidence 3445577788888875 789999999 6777776655578999999997664 32 2223445555666654 22222
Q ss_pred EEEEEEEEEEcCC-CCceeeEEEEEEeeCCCCcEEEEcee
Q 033171 81 LIFVSGSLQLAGE-DHHLRFSQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 81 lI~V~G~~~~~~~-~~~~~F~qtF~L~~~~~~~y~I~nD~ 119 (125)
.|.|....... ..+. -.-|.++.+.+ ++|.|..+-
T Consensus 84 --~v~~~~~~~~~~~~~~-~r~T~v~~k~~-g~W~Iv~~H 119 (122)
T 3b7c_A 84 --MVVGRWDLKRLKDTPT-GVFTLLVEKID-DRWVITMDH 119 (122)
T ss_dssp --EEEEEEEEECSSCCCE-EEEEEEEEEET-TEEEEEEEE
T ss_pred --EEEEEEEEEccCCCCC-cEEEEEEEEeC-CCEEEEEEe
Confidence 33455544322 1132 24677888877 899998763
No 25
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=97.57 E-value=0.002 Score=42.10 Aligned_cols=106 Identities=17% Similarity=0.254 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEE--EcCc-eec-CHHHHHHHHhc-CCCCcceEEeEEeeeeecCCCCcE
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLT--FEGQ-KFF-GVDDISTKFNQ-LPFDQCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t--~~g~-~~~-G~~~I~~~l~~-lp~~~~~~~i~s~D~q~~~~~~~i 80 (125)
+.-.+-++.|+.-++. +.+.|.+.|++++.+. .+|. ... ..++..+.+.+ -|....+|.|.++|... +.-
T Consensus 12 ~aI~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~~p~~~~~~~I~~I~i~g----d~A 87 (125)
T 3duk_A 12 DGITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSNGPAKNVQSRITNIDIVG----TVA 87 (125)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHHCCCTTCEEEEEEEEEET----TEE
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhccCCCCcccceEEEEEEEC----CEE
Confidence 3345668999999986 7899999999999884 4565 222 33555554432 34447788888777642 222
Q ss_pred EEEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEe
Q 033171 81 LIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 81 lI~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
.+.| .+..-. ...|+..|.|.+.+ |+|.|.|-+|+.
T Consensus 88 ~a~v----~~~~~~-~~~f~D~l~L~k~d-g~WkIv~K~~~~ 123 (125)
T 3duk_A 88 HARV----EAENWT-NFKFSDLFLLLKLD-GKWTIVNKVFHL 123 (125)
T ss_dssp EEEE----EEECSS-SCCEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEE----EEEEcC-CCeEEEEEEEEEeC-CEEEEEEEEEEe
Confidence 2222 222122 46799999999999 999999999875
No 26
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=97.57 E-value=0.00067 Score=45.06 Aligned_cols=110 Identities=6% Similarity=-0.019 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHH-HHhcC-C-CCcceEEeEEeeeeecCCCCcEE
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDIST-KFNQL-P-FDQCRHMISTIDSQPCPSTGGLL 81 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~-~l~~l-p-~~~~~~~i~s~D~q~~~~~~~il 81 (125)
++.....+..|+..+.. +.+.+..+|.+++.+...+....|.++|.+ .+... . +....+.+..+..... . +..+
T Consensus 29 ~~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-g-d~A~ 106 (148)
T 3bb9_A 29 DSAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMAYLKGLTITPKEHQITIT-G-DIAI 106 (148)
T ss_dssp TSHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTEEECSHHHHHHTHHHHHHHHHHTEEEEEEEEEEEEE-T-TEEE
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHhhCCCeEEEeCCCccCCHHHHHHHhHHHHHHhccCceEEeeeEEEEEc-C-CEEE
Confidence 34567788999988874 789999999999987766666889999998 55432 1 0134455555555444 2 3333
Q ss_pred EEEEEEEEEc--CCCCceeeEEEEEE-eeCCCCcEEEEce
Q 033171 82 IFVSGSLQLA--GEDHHLRFSQMFHL-IPTPRGSFAVQND 118 (125)
Q Consensus 82 I~V~G~~~~~--~~~~~~~F~qtF~L-~~~~~~~y~I~nD 118 (125)
+.....+... +.+....+--|+++ .+.+ |+|.|...
T Consensus 107 ~~~~~~~~~~~~G~~~~~~~r~T~v~~~k~~-g~WkIvh~ 145 (148)
T 3bb9_A 107 STSISHAQGEYKGKSIDSMTMETLVLIKQAD-GRWKITHV 145 (148)
T ss_dssp EEEEEEEEECCC--CEEEEEEEEEEEEECTT-SCEEEEEE
T ss_pred EEEEEEEeeeeCCcccccceEEEEEEeEEcC-CcEEEEEE
Confidence 3322233321 22212346668888 7776 99999864
No 27
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=97.49 E-value=0.00071 Score=45.32 Aligned_cols=108 Identities=6% Similarity=0.097 Sum_probs=68.9
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCc--eEEEc-CceecCHHHHHHHHhcCCCCcc-eEEeEEeeeeecCCCCcEEEE
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTS--MLTFE-GQKFFGVDDISTKFNQLPFDQC-RHMISTIDSQPCPSTGGLLIF 83 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S--~~t~~-g~~~~G~~~I~~~l~~lp~~~~-~~~i~s~D~q~~~~~~~ilI~ 83 (125)
.+.-.+.||+.|.+ +.+.|..+|.++. .+... |....|+++|.+.+..+= ... ...++..|.+....++.-++.
T Consensus 10 ~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f-~~~~~~~i~~~~v~v~~~gd~A~v~ 88 (144)
T 3gwr_A 10 PEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMF-GAAGRFRLQVKAVHEIRQADHVIRI 88 (144)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHH-HHHCCEEEEEEEEEEEECSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHH-cCCCcEEEEEEEEEEEecCCEEEEE
Confidence 45567788988885 7899999999884 44444 467899999999886531 111 234444443333123445555
Q ss_pred EEEEEEEcCC-CCceeeEEEEEEeeCCCCcEEEEce
Q 033171 84 VSGSLQLAGE-DHHLRFSQMFHLIPTPRGSFAVQND 118 (125)
Q Consensus 84 V~G~~~~~~~-~~~~~F~qtF~L~~~~~~~y~I~nD 118 (125)
+...+..... .....+--|.++.+.+ ++|.|...
T Consensus 89 ~~e~~~~~~~~g~~~~~r~T~V~~r~~-g~Wrivhh 123 (144)
T 3gwr_A 89 VDEFLTIGDETAPRPAILATNVYRREA-DGWRMVLH 123 (144)
T ss_dssp EEEEEEETTCSSCCCCEEEEEEEEECS-SSEEEEEE
T ss_pred EEEEEEecCCCCceeeEEEEEEEEEEC-CEEEEEEE
Confidence 5566766432 1124566788888887 88998764
No 28
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=97.38 E-value=0.0024 Score=42.24 Aligned_cols=113 Identities=14% Similarity=0.122 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCcee-cCHHHHHHHHhcCC-----CCcceEEeEEeeeeecCCCCc
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKF-FGVDDISTKFNQLP-----FDQCRHMISTIDSQPCPSTGG 79 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~-~G~~~I~~~l~~lp-----~~~~~~~i~s~D~q~~~~~~~ 79 (125)
+.-..++..|...+|. +.+.+..+|.+++.+.+.+... .|+++|.+.+...+ +..+.|.+..+..... . +.
T Consensus 19 ~~I~~l~~~y~~a~D~~d~~~~~~lf~~Da~~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~h~~~~~~i~~~-g-d~ 96 (155)
T 2rfr_A 19 EEIRELIARYGPLADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVTVE-G-DT 96 (155)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEEEE-T-TE
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHhhcCCceEEEcCCCccccCHHHHHHHHHhccccccCCCceeEeCCCeEEEEe-C-CE
Confidence 4456889999999996 6789999999999998876566 99999999988763 2246788776554433 2 22
Q ss_pred EEEEEEEEEEE-cCCCCceee---EEEEEEeeCCCCcEEEEceeEEee
Q 033171 80 LLIFVSGSLQL-AGEDHHLRF---SQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 80 ilI~V~G~~~~-~~~~~~~~F---~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
..+...-.+.. .... ...+ ..+..+.+.+ |+|.|.+-.++++
T Consensus 97 A~~~~~~~~~~~~~~~-~~~~~~g~y~d~~~r~~-g~Wri~~r~~~~~ 142 (155)
T 2rfr_A 97 ATARCHSVVFRCVSGT-FGSHRVSANRWTFRRTP-AGWRAVRRENALL 142 (155)
T ss_dssp EEEEEEEEEEEEETTE-EEEEEEEEEEEEEEEET-TEEEEEEEEEEES
T ss_pred EEEEEEEEEEEEcCCC-ceEEEeeeeEEEEEECC-CEEEEEEEEEEec
Confidence 22222222111 1111 1111 1345677776 8999998777664
No 29
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=97.36 E-value=0.0065 Score=40.93 Aligned_cols=115 Identities=10% Similarity=0.088 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCC-CcceEEeEEeeeeecCCCCcEEEE
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPF-DQCRHMISTIDSQPCPSTGGLLIF 83 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~-~~~~~~i~s~D~q~~~~~~~ilI~ 83 (125)
.+.-..++..|+..+|. +.+.+..+|.+++.+.+.|....|+++|.+.+..... ..+.|.+..+..... . +...+.
T Consensus 13 ~~~I~~l~~~y~~a~D~~D~~~~~~lf~~Da~~~~~g~~~~G~~~i~~~~~~~~~~~~~~h~~~~~~i~~~-g-d~A~~~ 90 (170)
T 2chc_A 13 ILRIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDGWVIRGRPALREYADAHARVVRGRHLTTDLLYEVD-G-DVATGR 90 (170)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHCCCCEEEEEEEEEEE-T-TEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHhcccCcEEEEeCCCCcCCHHHHHHHHHHhhcccceEEecCCeEEEEe-C-CEEEEE
Confidence 34556899999999996 6789999999999999888888999999998776421 257788777655443 2 222222
Q ss_pred EEEEEE-EcCCCCce--eeEEEEEEeeCCCCcEEEEceeEEee
Q 033171 84 VSGSLQ-LAGEDHHL--RFSQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 84 V~G~~~-~~~~~~~~--~F~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
....+. ...+.... .-.-+.++.+.+ |+|.|..-.+.+.
T Consensus 91 ~~~~~~~~~~~g~~~~~~g~y~d~~~r~d-g~Wri~~r~~~~~ 132 (170)
T 2chc_A 91 SASVVTLATAAGYKILGSGEYQDRLIKQD-GQWRIAYRRLRND 132 (170)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred EEEEEEEEcCCCCEEEEEEEEEEEEEEEC-CEEEEEEEEEEEe
Confidence 221111 11221111 112344566666 8999998777653
No 30
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=97.21 E-value=0.0057 Score=39.95 Aligned_cols=112 Identities=12% Similarity=0.015 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEE---cCceecCHHHHHHHHhcC-C--CCcceEEeEEeeeeecCCCCc
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF---EGQKFFGVDDISTKFNQL-P--FDQCRHMISTIDSQPCPSTGG 79 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~---~g~~~~G~~~I~~~l~~l-p--~~~~~~~i~s~D~q~~~~~~~ 79 (125)
+-.....+.|+..+++ +.+.+..+|.++..+.- .|....|.++|.+.+..+ + .......+.....+.. .+..
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~-gd~a 91 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVI-GEDA 91 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEEC-STTE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEe-cCcE
Confidence 3456777888888875 78999999999987753 367889999999988774 2 1133445555556555 3333
Q ss_pred EEEEEEEEEE--EcCCCC--ceeeEEEEEEeeCCCCcEEEEceeEE
Q 033171 80 LLIFVSGSLQ--LAGEDH--HLRFSQMFHLIPTPRGSFAVQNDIFR 121 (125)
Q Consensus 80 ilI~V~G~~~--~~~~~~--~~~F~qtF~L~~~~~~~y~I~nD~fr 121 (125)
.++. ...+. .+++.. ....-.|+++.+.+ |+|.|..+-..
T Consensus 92 av~~-~~~~~~~~~~~g~~~~~~~r~T~v~~k~~-g~Wkivh~H~S 135 (143)
T 2ux0_A 92 ACIA-YIRLTQYIDGQGRPRTSQSEETRVWHRRD-GKWLNVHYHCS 135 (143)
T ss_dssp EEEE-EEEEEEEECTTSCEEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred EEEE-EeEeeeeecCCCCeeeeeEEEEEEEEEEC-CEEEEEEEeeC
Confidence 3332 22222 232221 23456777888877 99999876443
No 31
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=97.18 E-value=0.0042 Score=41.63 Aligned_cols=116 Identities=10% Similarity=0.161 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhhcccc--ChhhhcccccCCceEEEcC-c--eecCHHHHHHHHhcC--CCCcceEEeEEeeeeecCCCC
Q 033171 6 ELVGKTFVGHYYHLFDN--DRASLSSLYQPTSMLTFEG-Q--KFFGVDDISTKFNQL--PFDQCRHMISTIDSQPCPSTG 78 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~--~r~~L~~~Y~~~S~~t~~g-~--~~~G~~~I~~~l~~l--p~~~~~~~i~s~D~q~~~~~~ 78 (125)
.+.-..++..|...+|. +.+.+..+|.+++.+.+.+ . ...|+++|.+.+... |+..+.|.+..+..... .++
T Consensus 27 ~~~I~~l~~~y~~alD~~~D~d~~~~lfteDa~~~~~~~g~~~~~G~~~i~~~~~~~~~~~~~~~h~~~~~~I~~~-~gd 105 (163)
T 3b8l_A 27 RLAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANMSHHAHYLTNFAVTGY-EGD 105 (163)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEE-CSS
T ss_pred HHHHHHHHHHHHHHHCcCCCHHHHHhhcCCCEEEEecCCCCCCccCHHHHHHHHHHhhccCCceEEEecCEEEEEe-CCC
Confidence 45567899999999997 5688999999999987642 2 688999999988653 23367788877666533 223
Q ss_pred cEEEEEEEE-EEEcCCCCce--eeEEEEEEeeCCCCcEEEEceeEEee
Q 033171 79 GLLIFVSGS-LQLAGEDHHL--RFSQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 79 ~ilI~V~G~-~~~~~~~~~~--~F~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
...+..... +...++..+. .-.-+.++.+.+ |+|.|.+-.+++.
T Consensus 106 ~A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r~d-g~WrI~~r~~~~~ 152 (163)
T 3b8l_A 106 TASMRAYVIGMGVGKDGRAVTVNGRYFFEVRRTE-KGWKATRYTMDFL 152 (163)
T ss_dssp EEEEEEEEEEEEEETTSCEEEEEEEEEEEEEEET-TEEEEEEEEEEES
T ss_pred EEEEEEEEEEEEEcCCCCeEEEEEEEEEEEEEeC-CEEEEEEEEEEEE
Confidence 333222222 2222222122 123455666766 8999998877654
No 32
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=97.13 E-value=0.0076 Score=37.91 Aligned_cols=110 Identities=9% Similarity=-0.035 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhccc-cChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEEEEEE
Q 033171 7 LVGKTFVGHYYHLFD-NDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLLIFVS 85 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~-~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~ilI~V~ 85 (125)
+--....+.|+..+. .+.+.|..++.++..+...+-...|++++.+.+.+-+.......+..+..+.. .+..+++. .
T Consensus 6 ~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~~~~~~~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~-g~~a~~~~-~ 83 (123)
T 2r4i_A 6 DVILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSSGKIALRAVVPSDYIIRII-HDTVVVSV-N 83 (123)
T ss_dssp HHHTHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCEEEEEEEEEEEEEEEE-TTEEEEEE-E
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhhCcCeEEECCCCCCccHHHHHHHHhcCCeEEEEEeecccEEEEE-CCEEEEEE-E
Confidence 344455666676654 58899999999987776655556788888887776432233455667777776 44333333 2
Q ss_pred EEEE--EcCCCCceeeEEEEEEeeCCCCcEEEEcee
Q 033171 86 GSLQ--LAGEDHHLRFSQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 86 G~~~--~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~ 119 (125)
-.+. ..+.+....+-.|.+..+.+ ++|.|...-
T Consensus 84 ~~~~~~~~g~~~~~~~r~t~vw~r~~-g~W~iv~~h 118 (123)
T 2r4i_A 84 IEIKGEYMEHTLDNTFRYLRVWKLFD-GNWKVIAGS 118 (123)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEEET-TEEEEEEEE
T ss_pred EEEEEEECCcceeEEEEEEEEEEEeC-CeEEEEEEE
Confidence 2322 23332122333455666666 899987653
No 33
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=97.08 E-value=0.013 Score=40.49 Aligned_cols=112 Identities=11% Similarity=0.127 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCc-----------------eEEEcC-ceecCHHHHHHHHhcC-C-CCcceE
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTS-----------------MLTFEG-QKFFGVDDISTKFNQL-P-FDQCRH 64 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S-----------------~~t~~g-~~~~G~~~I~~~l~~l-p-~~~~~~ 64 (125)
.+--..-...||..+.. +.+.|..+|.+++ .+.+.| ....|+++|.+.+..+ . ....++
T Consensus 11 ~~~I~~~~~~~~~A~~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg~~~l~G~~~I~~~~~~~f~~~~~~~~ 90 (170)
T 3cnx_A 11 VEQVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTEYIQF 90 (170)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhcCCcccccccccccccccccEEEEcCCCccccCHHHHHHHHHHHHccCCeeEE
Confidence 34455678889999985 7899999999884 345554 6789999999877542 1 013455
Q ss_pred EeEEeeeeecCCCCcEEEEEEEEEEEcCC--------CCc--eeeEEEEEEeeCCCCcEEEEceeE
Q 033171 65 MISTIDSQPCPSTGGLLIFVSGSLQLAGE--------DHH--LRFSQMFHLIPTPRGSFAVQNDIF 120 (125)
Q Consensus 65 ~i~s~D~q~~~~~~~ilI~V~G~~~~~~~--------~~~--~~F~qtF~L~~~~~~~y~I~nD~f 120 (125)
.+..+..... .+..++.+...+...+. .+. ..+.-|.++.+.+ ++|.|...--
T Consensus 91 ~~~dv~v~~~--gD~A~v~~~~~~~~~~~~~~g~~~~g~~~~~~~raT~Vfrr~~-ggWriv~hH~ 153 (170)
T 3cnx_A 91 FLTDVHVSVT--GDTALVTCTENILSGGPPPDDSDELGPLVGQLVVATNVFRRTP-DGWKLWSHHA 153 (170)
T ss_dssp EEEEEEEEEE--TTEEEEEEEEEEEEEC---------CCCEEEEEEEEEEEECCT-TCCEEEEEEE
T ss_pred EEEEEEEEEe--CCEEEEEEEEEEeccCCccccccccCccccceEEEEEEEEEEC-CEEEEEEEec
Confidence 5555555444 33344444555554211 111 1255788888887 8899987543
No 34
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=97.05 E-value=0.025 Score=36.37 Aligned_cols=104 Identities=14% Similarity=0.191 Sum_probs=64.1
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceE--EEcCceecCHHHHHHHHhc-CCCCcceEEeEEeeeeecCCCCcEEEEE
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSML--TFEGQKFFGVDDISTKFNQ-LPFDQCRHMISTIDSQPCPSTGGLLIFV 84 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~--t~~g~~~~G~~~I~~~l~~-lp~~~~~~~i~s~D~q~~~~~~~ilI~V 84 (125)
...-+..|...++. +.+.|..+|.+++.+ ...|....|.++|.+ +.. +|-......+..+..... .+. ..+ +
T Consensus 16 i~~~~~~y~~A~~~~D~~~l~~lf~~d~~~~~~~~~~~~~G~~~i~~-~~~~~~~~~~~~~~~~~~~~~~-~~d-~A~-~ 91 (129)
T 2rcd_A 16 VTAAFYRYEKALTGNDVAVLDELFWHDEKTVRYGAGENLYGIEEIRA-FRLARPSAGLDRALRNTVITTY-GHD-MAV-A 91 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEETTEEEESHHHHHH-HHHHSCCTTCCCEEEEEEEEEB-TTS-EEE-E
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhccCCCCEEEECCCCccCCHHHHHH-HHHhcCCCCCceEEEEEEEEEe-cCc-EEE-E
Confidence 33444555577775 789999999998743 346778899999999 653 442223344444555444 222 222 3
Q ss_pred EEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEcee
Q 033171 85 SGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 85 ~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~ 119 (125)
+..+...+. .....+|.++.+.+ ++|.|...-
T Consensus 92 ~~~~~~~~~--~~~g~~t~v~~r~~-~gWrIv~~H 123 (129)
T 2rcd_A 92 STEFTRTGS--TKIGRQMQTWVKMP-EGWRIVAAH 123 (129)
T ss_dssp EEEEECSSC--CSCEEEEEEEEEET-TEEEEEEEE
T ss_pred EEEEEEcCC--CCceeEEEEEEECC-CcEEEEEEe
Confidence 445554432 23345677787877 899998754
No 35
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=97.03 E-value=0.0097 Score=40.68 Aligned_cols=116 Identities=15% Similarity=0.112 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC-ceecCHHHHHHHH-hcC--CCCcceEEeEEeeeeecCCCCcE
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-QKFFGVDDISTKF-NQL--PFDQCRHMISTIDSQPCPSTGGL 80 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l-~~l--p~~~~~~~i~s~D~q~~~~~~~i 80 (125)
.+.-.+++..|...+|. +.+.+..+|.+++.+.+.+ ....|+++|.+.+ ... |+..+.|.+..+..... .++..
T Consensus 30 ~~~I~~ll~ry~~alD~~d~d~~~~lfteDa~~~~~~~g~~~G~~~i~~~~~~~~~~~~~~t~H~i~n~~I~~~-g~d~A 108 (176)
T 3a76_A 30 RAAIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGIGTYKGPEGALDLANNVLWPMFHECIHYGTNLRLEFV-SADKV 108 (176)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTTEEEEHHHHHHHHHHHTHHHHEEEEEEEEEEEEEEES-SSSEE
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHhhccCCeEEEcCCCccccCHHHHHHHHHHhhhcccCceEEecCCeEEEEc-CCCeE
Confidence 34556899999999996 5689999999999987765 3578999999988 542 34478888887666544 21333
Q ss_pred EEEEEEEEE--EcCCCCceee--EEEEEEeeCCCCcEEEEceeEEee
Q 033171 81 LIFVSGSLQ--LAGEDHHLRF--SQMFHLIPTPRGSFAVQNDIFRLN 123 (125)
Q Consensus 81 lI~V~G~~~--~~~~~~~~~F--~qtF~L~~~~~~~y~I~nD~fr~~ 123 (125)
.+.....+. .......... .-+..+.+.+ |+|.|..-.+++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~gry~d~l~r~d-g~WrI~~r~~~~~ 154 (176)
T 3a76_A 109 NGIGDVLLLGNLVEGNQSILIAAVFTDEYERRD-GVWKFSKRNACTN 154 (176)
T ss_dssp EEEEEEEEEEEETGGGEEEEEEEEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCCceEEEEEEEEEEEEEEC-CEEEEEEEEEEEE
Confidence 332111222 2222111111 1233466666 8999998876654
No 36
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=96.89 E-value=0.0023 Score=40.87 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC--ceecCHHHHHHHHhcC
Q 033171 1 MEDQTELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG--QKFFGVDDISTKFNQL 57 (125)
Q Consensus 1 ~~~~~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g--~~~~G~~~I~~~l~~l 57 (125)
|++...+..+..+..|+..+++ +.+.+..+|.+++.+...+ .+..|+++|.+.+..+
T Consensus 1 m~~~~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~ 60 (131)
T 1oh0_A 1 MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQG 60 (131)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHH
Confidence 6666667778899999999986 6789999999999887753 4889999999988765
No 37
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=96.78 E-value=0.014 Score=38.76 Aligned_cols=109 Identities=9% Similarity=0.063 Sum_probs=60.5
Q ss_pred HHHHHHHhhccc-cChhhhcccccCCc--eEEEcCceecCHHHHHHHHhcCCC----CcceEEeEEee-eeecCCCCcEE
Q 033171 10 KTFVGHYYHLFD-NDRASLSSLYQPTS--MLTFEGQKFFGVDDISTKFNQLPF----DQCRHMISTID-SQPCPSTGGLL 81 (125)
Q Consensus 10 ~~Fv~~YY~~l~-~~r~~L~~~Y~~~S--~~t~~g~~~~G~~~I~~~l~~lp~----~~~~~~i~s~D-~q~~~~~~~il 81 (125)
......|+..++ ++.+.|..+|.++. .+...+-...|.++|.+.+..-.+ ....+.+..++ .+.. .+..+.
T Consensus 13 ~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~I~v~-gd~A~v 91 (145)
T 3soy_A 13 TEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVY-GNAAVA 91 (145)
T ss_dssp HHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETTEEEESHHHHHHHCCCCCCCCTEEEEEEEESSCCEEEEE-TTEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCCCcccCHHHHHHHHHHhhhhccccccceEEeeeeEEEEc-CCEEEE
Confidence 444566666665 57899999997663 444444467999999988754222 12333444444 3443 222222
Q ss_pred E---EEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEcee
Q 033171 82 I---FVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 82 I---~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~ 119 (125)
+ .+.|.+..++.+....+-.|.++.+.++++|.|...=
T Consensus 92 ~~~~~~~~~~~~~G~~~~~~~r~T~V~~r~~~ggWkIvh~H 132 (145)
T 3soy_A 92 EFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVHVH 132 (145)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEEEEEETTTEEEEEEEE
T ss_pred EEEEEEEEEEcCCCCeeeeEEEEEEEEEEcCCCCEEEEEEe
Confidence 1 1223222223321234566777777333899998653
No 38
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=96.72 E-value=0.0015 Score=43.30 Aligned_cols=58 Identities=26% Similarity=0.419 Sum_probs=45.0
Q ss_pred HHHHHHhhcccc---C---hhhhcccccCCceEEEcCceecCHHHHHHHHhcCC--CCcceEEeEE
Q 033171 11 TFVGHYYHLFDN---D---RASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLP--FDQCRHMIST 68 (125)
Q Consensus 11 ~Fv~~YY~~l~~---~---r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp--~~~~~~~i~s 68 (125)
.-|++||.+.|. + .+.|..||.+++.+..+|.+..|+++|.+.+..+- +..++|.+..
T Consensus 6 ~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~Dav~~~~~~~~~G~~ai~~F~~~~~~a~~~~~~~~~~ 71 (131)
T 3er7_A 6 TTLDRYFDLFDASRTDEKAFDDLISLFSDEITFVLNGQEQHGIDAWKQFVRMVFTANQDIKHMYAG 71 (131)
T ss_dssp CHHHHHHHHHHHTTTCHHHHHHHHHTEEEEEEEEETTEEEESHHHHHHHHHHHHHHEEEEEEEECC
T ss_pred HHHHHHHHHHhhccCCccCHHHHHHHhCCCeEecCCCCCcCChHHHHHHHHHHHhhCcCceEEEEE
Confidence 458899999983 2 57888999999999666888999999999988651 2256666555
No 39
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=96.60 E-value=0.012 Score=38.06 Aligned_cols=102 Identities=18% Similarity=0.294 Sum_probs=66.0
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEE--cCceec-CHHHHHHHHhcCCCC---cceEEeEEeeeeecCCCCcEE
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF--EGQKFF-GVDDISTKFNQLPFD---QCRHMISTIDSQPCPSTGGLL 81 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~--~g~~~~-G~~~I~~~l~~lp~~---~~~~~i~s~D~q~~~~~~~il 81 (125)
-.+-++.|+.-++. +.+.|.+-|++++.+.. +|.... ..++..+ +..-|.. .....|.++|... +.-.
T Consensus 11 I~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~~~~~i~~I~i~g----d~A~ 85 (120)
T 3fka_A 11 LTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETDPFWAISSVSVQG----DIAM 85 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCCCCEEEEEEEEET----TEEE
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCCceEEEEEEEEEC----CEEE
Confidence 34458999999986 68899999999998743 444332 2344444 4432321 1133466666531 3333
Q ss_pred EEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEe
Q 033171 82 IFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 82 I~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
+.|. +.. .+..|...|.|.+.+ |+|.|.|-+|++
T Consensus 86 a~v~--~~~----~~~~f~D~~~L~k~d-g~WkIv~K~~~~ 119 (120)
T 3fka_A 86 LHVE--NDW----AGMRFDDFLTVLLHE-GSWRIVSKVYRI 119 (120)
T ss_dssp EEEE--EEE----TTEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEE--EEc----CCCceEEEEEEEEeC-CEEEEEEEEEEc
Confidence 3333 222 257899999999999 999999999975
No 40
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=96.50 E-value=0.035 Score=36.35 Aligned_cols=93 Identities=12% Similarity=0.076 Sum_probs=59.8
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc--------eecCHHHHHHHHhcCC--CCcceEEeEEeeeeecCCC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ--------KFFGVDDISTKFNQLP--FDQCRHMISTIDSQPCPST 77 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~--------~~~G~~~I~~~l~~lp--~~~~~~~i~s~D~q~~~~~ 77 (125)
...+++.||..+++ +.+.|..+|.++......|. ...|+++|.+.+..+. +....+++..+-+ .+
T Consensus 6 ~~~~v~~~~~a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~~~~~~~~~~~~----~g 81 (143)
T 3dm8_A 6 LWRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRIYRYHRESVML----GI 81 (143)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEEEEEEEEEEEE----CS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcCcceEEEEEEEE----cC
Confidence 37899999999986 67999999999998776663 4789999999998775 1122344443221 23
Q ss_pred CcEEEEEEEEEEEc--CCCCceeeEEEEEE
Q 033171 78 GGLLIFVSGSLQLA--GEDHHLRFSQMFHL 105 (125)
Q Consensus 78 ~~ilI~V~G~~~~~--~~~~~~~F~qtF~L 105 (125)
+.+.+.+....... +.+-...+...|.+
T Consensus 82 d~v~v~~~~~~~~~~tG~~~~~~~~~~~~v 111 (143)
T 3dm8_A 82 DSAASMVRYSLTAAGTNRPISVRMALFTQF 111 (143)
T ss_dssp SEEEEEEEEEEEETTTCCEEEEEEEEEEEE
T ss_pred CeEEEEEEEEEEEeCCCCEEEEEEEEEEEE
Confidence 34443443333332 33223466777766
No 41
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=96.32 E-value=0.029 Score=42.28 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=78.9
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEc-CceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEEEEEE
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE-GQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLLIFVS 85 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~-g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~ilI~V~ 85 (125)
|.+.=|..|+..|+. +-+.+..||.+++.+.=. |.++.|+++|...+..-- +..+.....--+.|. .+++.-+.|+
T Consensus 193 i~~~tVl~Y~e~lNa~Df~a~aaLFA~Dg~LepPf~~PIvGreAI~~y~~~ea-q~~~l~P~~g~~ep~-e~g~~qi~vt 270 (323)
T 3mg1_A 193 VTNATVLNYMDNLNANDFDTLIELFTSDGALQPPFQRPIVGKENVLRFFREEC-QNLKLIPERGVTEPA-EDGFTQIKVT 270 (323)
T ss_dssp BCCHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHC-TTCEEEEEEEEEEEC-GGGCEEEEEE
T ss_pred cchHHHHHHHHHhcccCHHHHHHHccCCCeeCCCCCCCccCHHHHHHHHHHHh-ccCEEeeccCccccc-cCCCceEEEE
Confidence 445668999999996 679999999999998643 479999999999998633 245555555555676 6778999999
Q ss_pred EEEEEcCCCC--ceeeEEEEEEeeCCCCcEEEEce
Q 033171 86 GSLQLAGEDH--HLRFSQMFHLIPTPRGSFAVQND 118 (125)
Q Consensus 86 G~~~~~~~~~--~~~F~qtF~L~~~~~~~y~I~nD 118 (125)
|.++..-... .+.-.-.|.|-+++ .=+++.=|
T Consensus 271 GkVqTpwfGv~v~mnVaW~F~lN~~g-kI~~v~i~ 304 (323)
T 3mg1_A 271 GKVQTPWFGGNVGMNIAWRFLLNPEG-KIFFVAID 304 (323)
T ss_dssp EEEECTTTGGGCCEEEEEEEEECTTS-CEEEEEEE
T ss_pred EEEEcccCCccccccceeEEEECCCC-cEEEEEeh
Confidence 9998764321 33556677886666 55555444
No 42
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=96.28 E-value=0.0057 Score=39.05 Aligned_cols=63 Identities=10% Similarity=0.209 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc---------CceecCHHHHHHHHhc----CCCCcceEEeEE
Q 033171 3 DQTELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE---------GQKFFGVDDISTKFNQ----LPFDQCRHMIST 68 (125)
Q Consensus 3 ~~~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~---------g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 68 (125)
|+. +-.+.+++.||..+++ +.+.|..+|.+++.+.-. +....|+++|.+.|.. .| ..++++..
T Consensus 5 m~~-~~~~~~~~~~~~a~n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~--~~~~~~~~ 81 (122)
T 3h3h_A 5 ITQ-AFAQQFSREWIDAWNAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIP--DLHFEWIA 81 (122)
T ss_dssp CCH-HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCT--TCCCEEEE
T ss_pred CCH-HHHHHHHHHHHHHHhccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCC--CcEEEEEE
Confidence 444 3457899999999986 789999999999998754 3688999999998765 45 55556554
No 43
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=96.26 E-value=0.025 Score=37.57 Aligned_cols=50 Identities=16% Similarity=0.395 Sum_probs=42.2
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEE-cCceecCHHHHHHHHhcCC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF-EGQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~-~g~~~~G~~~I~~~l~~lp 58 (125)
+++.|+.||..+++ +.+.+..+|.+++.+.. .|.+..|+++|.+.+..++
T Consensus 22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D~v~~~p~g~~~~G~e~i~~~~~~~~ 73 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDMPAFLALLSEDVIHDINQGERQMGKARFAAFMEKMN 73 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCcCCHHHHHHHHHHHH
Confidence 46788899998875 78999999999999754 4678999999999998776
No 44
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=96.19 E-value=0.12 Score=33.12 Aligned_cols=107 Identities=12% Similarity=0.217 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEE---cCc-eecCHHHHHHHHhcC--CCCcceEEeEEeeeeecCCCC
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF---EGQ-KFFGVDDISTKFNQL--PFDQCRHMISTIDSQPCPSTG 78 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~---~g~-~~~G~~~I~~~l~~l--p~~~~~~~i~s~D~q~~~~~~ 78 (125)
.+.-..-+..|...++. +.+.|...|++++.+.. +|. .....++..+.+.+- |.....+.|.+++.. . +
T Consensus 11 ~~aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~i~---g-d 86 (128)
T 3blz_A 11 YHAIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDNVFHPSPEAKAAIARIDIV---G-T 86 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHHHTCCCCTTCEEEEEEEEEE---T-T
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEecCHHHHHHHHHhcCCCCccccCeEEEEEEE---C-C
Confidence 34556778999999996 68889999999998854 232 122334444444332 322566666555442 2 2
Q ss_pred cEEEEEEEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEceeEEe
Q 033171 79 GLLIFVSGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 79 ~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
.-.+.|... ... ...|...|.|.+.+ |+|.|.+-.+..
T Consensus 87 ~A~a~~~~~-~~~----~~~~~d~~~l~k~d-g~WkI~~~~~~~ 124 (128)
T 3blz_A 87 AASARIDTD-DIS----GFRFTDFFNLLKVE-GKWTVVSKIYHT 124 (128)
T ss_dssp EEEEEEEEE-EET----TEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEEEEEEE-EcC----CCceEEeEEEEEEC-CEEEEEEEEEEe
Confidence 223333321 121 35688888998888 999999998875
No 45
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=96.15 E-value=0.088 Score=33.68 Aligned_cols=50 Identities=14% Similarity=0.337 Sum_probs=42.1
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEEc-CceecCHHHHHHHHhcCC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE-GQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~-g~~~~G~~~I~~~l~~lp 58 (125)
.++.++.||..+++ +.+.+..+|.++.....+ |....|+++|.+.+..++
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~~~~~~G~~~~~~~~~~~~ 61 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDVAHDLNQGPREIGRAAFASFLQRMN 61 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcEEEEcCCCCceEcHHHHHHHHHHHh
Confidence 56788899998875 789999999999876554 568999999999999887
No 46
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=96.11 E-value=0.069 Score=37.43 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhhccccChhhhcccccCCceEEEc----Cc--eecCHHHHHHHHhcCC--CCcceEEeEEeeeeecCCC-
Q 033171 7 LVGKTFVGHYYHLFDNDRASLSSLYQPTSMLTFE----GQ--KFFGVDDISTKFNQLP--FDQCRHMISTIDSQPCPST- 77 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~~----g~--~~~G~~~I~~~l~~lp--~~~~~~~i~s~D~q~~~~~- 77 (125)
+--..=|++|+.++.++++.+..||.+++.+.+. |- ...|+++|.+.+..++ +.. ..+..++...+ .+
T Consensus 41 ~~nr~vV~~yl~~~~~D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~d--~~~~~~~v~~t-aDp 117 (185)
T 3jum_A 41 QHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPD--WVWTDIQIFET-QDP 117 (185)
T ss_dssp HHHHHHHHHHHHCCGGGGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHSTT--CEEEEEEEECC-SST
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCCC--CeeeEEEEEEe-cCC
Confidence 3445678899999999999999999999998873 22 4789999999877654 112 34555666665 44
Q ss_pred CcEEEEEEEEEEE
Q 033171 78 GGLLIFVSGSLQL 90 (125)
Q Consensus 78 ~~ilI~V~G~~~~ 90 (125)
+.+++-..|.-+.
T Consensus 118 d~VvvE~~~~Gtv 130 (185)
T 3jum_A 118 NWFWVECRGEGAI 130 (185)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CEEEEEEEEEEEE
Confidence 3466656655443
No 47
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=96.04 E-value=0.026 Score=35.01 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhcCC
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~lp 58 (125)
+-.+..++.||..+++ +.+.+..+|.+++.+... +.+..|+++|.+.+..+.
T Consensus 5 ~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~ 59 (125)
T 1ohp_A 5 EHMTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSL 59 (125)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhc
Confidence 3457788999999986 679999999999988765 458899999999988764
No 48
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=96.02 E-value=0.12 Score=33.71 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC-ceecCHHHHHHHHhcCC
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-QKFFGVDDISTKFNQLP 58 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l~~lp 58 (125)
.-.++.++.||..+++ +.+.|..+|.++..+.-.| .+..|+++|.+.+..+.
T Consensus 15 ~~~~~~v~~f~~a~~~gD~~~l~~l~a~D~v~~~~~~~~~~G~~~i~~~~~~~~ 68 (149)
T 2bng_A 15 TEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQ 68 (149)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEeCCCCCccCHHHHHHHHHHHH
Confidence 3456788999998876 6789999999998877555 56789999999999886
No 49
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=96.01 E-value=0.16 Score=33.04 Aligned_cols=118 Identities=11% Similarity=-0.040 Sum_probs=72.2
Q ss_pred CCCCHH--HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcC---CCCcceEEeEEeeeeec
Q 033171 1 MEDQTE--LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQL---PFDQCRHMISTIDSQPC 74 (125)
Q Consensus 1 ~~~~~~--~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~D~q~~ 74 (125)
|.++.+ ..-.+|+..|...+|. +.+.+..+|.+++.+.....+..|+++|.+.+... ....+.|.+..+-....
T Consensus 2 m~~~~~d~~~I~~l~~rya~~lD~~d~~~~~~lft~Da~~~~~~g~~~g~~~i~~~~~~~~~~~~~~t~H~i~n~~i~~~ 81 (144)
T 2rgq_A 2 MELTALDKLEIMELAARFEMSLDKEDVENYLATFASDGALQGFWGIAKGKEELRQGFYAMLDTFARGKRHCSSNAIIQGN 81 (144)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCCHHHHHhhccCcEEEEcCCCCCCCHHHHHHHHHHHHhhCCCCcEEecCCeEEEEe
Confidence 555543 4567899999999996 57889999999999876523458999999887642 11258888887666443
Q ss_pred CCCCcEEEEEEEEEEEcCCCCceeeE-EEEEEeeCCCCcEEEEceeEE
Q 033171 75 PSTGGLLIFVSGSLQLAGEDHHLRFS-QMFHLIPTPRGSFAVQNDIFR 121 (125)
Q Consensus 75 ~~~~~ilI~V~G~~~~~~~~~~~~F~-qtF~L~~~~~~~y~I~nD~fr 121 (125)
.+ ...+.....+............ -...+.+.+ |+|.|..-...
T Consensus 82 -~d-~a~~~~~~~~~~~~~~~~~~~g~y~d~~~r~d-g~Wri~~r~~~ 126 (144)
T 2rgq_A 82 -YD-EATMESYLTVVNREDLNRAGSAFVKDQVRKIN-GKWYLILRQIE 126 (144)
T ss_dssp -SS-EEEEEEEEEEEESSSSCEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred -CC-EEEEEEEEEEEEecCCeEEEEEEEEEEEEEEC-CEEEEEEEEEE
Confidence 22 2222222222221111121111 233565666 88999876554
No 50
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=96.00 E-value=0.13 Score=34.02 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=40.4
Q ss_pred HHHHHHhhcccc-ChhhhcccccCCceEEE--cCceecCHHHHHHHHhcCC
Q 033171 11 TFVGHYYHLFDN-DRASLSSLYQPTSMLTF--EGQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 11 ~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~--~g~~~~G~~~I~~~l~~lp 58 (125)
+.|+.|+..+++ +.+.+..+|.+++.+.- .|.+..|+++|.+.+..+.
T Consensus 29 eiv~~y~~A~n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~~ 79 (158)
T 4h3u_A 29 EIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTD 79 (158)
T ss_dssp HHHHHHHHHHHSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhhh
Confidence 578889999986 78999999999998864 3568899999999888753
No 51
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=95.97 E-value=0.075 Score=34.61 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc----eecCHHHHHHHHhcCC
Q 033171 4 QTELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ----KFFGVDDISTKFNQLP 58 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~----~~~G~~~I~~~l~~lp 58 (125)
+.-+++++.++.|+..+.. +.+.|..++.++....++|. ...|+++|.+.+..+.
T Consensus 9 ~~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~ 68 (134)
T 3dmc_A 9 NTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVS 68 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHH
Confidence 4567888999999999875 77999999999999999886 6889999998877654
No 52
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=95.93 E-value=0.17 Score=32.59 Aligned_cols=51 Identities=10% Similarity=0.232 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhcCC
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~lp 58 (125)
-.++-|..||..+.+ +.+.|..||.+++.+.+. +....|+++|.+.+...|
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~v~~~P~~~~~~~Gr~~~~~~~~~~~ 59 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHP 59 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCEEECHHHHHHHHHHCC
Confidence 356778999998875 689999999999999986 357899999999999888
No 53
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=95.82 E-value=0.064 Score=33.61 Aligned_cols=90 Identities=11% Similarity=0.164 Sum_probs=59.0
Q ss_pred HHHHHHhhcccc-ChhhhcccccCCceEEEcCc-eecCHHHHHHHHhcCCCC--cceEEeEEeeeeecCCCCcEEEEEEE
Q 033171 11 TFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ-KFFGVDDISTKFNQLPFD--QCRHMISTIDSQPCPSTGGLLIFVSG 86 (125)
Q Consensus 11 ~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~-~~~G~~~I~~~l~~lp~~--~~~~~i~s~D~q~~~~~~~ilI~V~G 86 (125)
+.|+.||..+++ +.+.+..+..++......|. +..|++++.+.+..+.-. ...+++..+= .+|. .|.|.|
T Consensus 4 ~~v~~~~~a~~~gD~~~~~~~ladDv~w~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~i-----~~Gd-~Vvv~~ 77 (112)
T 3f14_A 4 TTHYSIAQHFSSGDFPAVYACFNDIIEWNIIGNQVVKGKADVIDFCNKMLPEMKGAVLTNDNVI-----QNEN-QIVIEG 77 (112)
T ss_dssp HHHHHHHHHHHTTCGGGTGGGEEEEEEEEETTTEEEESHHHHHHHHHHHHHHHHTSEEEEEEEE-----ECSS-EEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHhcCCceEEEEcCCccEecHHHHHHHHHHHHhhcCCcEEEEEEEE-----EeCC-EEEEEE
Confidence 468999999986 67889999998876555554 588999999988876411 2455555521 1222 445566
Q ss_pred EEEE---cCCCCceeeEEEEEEe
Q 033171 87 SLQL---AGEDHHLRFSQMFHLI 106 (125)
Q Consensus 87 ~~~~---~~~~~~~~F~qtF~L~ 106 (125)
.+.. ++......|+..|.+.
T Consensus 78 ~~~~~~~~g~~~~~~~~~vf~~~ 100 (112)
T 3f14_A 78 KCRYFDAEGKEAFVSYCDIYRFE 100 (112)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEEEEEEEe
Confidence 6653 2222245688888874
No 54
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=95.68 E-value=0.24 Score=32.50 Aligned_cols=114 Identities=12% Similarity=0.101 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC-ceecCHHHHHHHHhcC--CCCcceEEeEEeeeeecCCCCcEEE
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-QKFFGVDDISTKFNQL--PFDQCRHMISTIDSQPCPSTGGLLI 82 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l~~l--p~~~~~~~i~s~D~q~~~~~~~ilI 82 (125)
+.-..++..|...+|. +.+.+..+|.+++.+.+.+ ....|+++|.+.+..+ ++..+.|.+..+..... .++....
T Consensus 11 ~~I~~l~~ry~~~~D~~d~~~~~~lFt~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~H~~~n~~I~~~-gdd~A~~ 89 (150)
T 3ef8_A 11 RAIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGTFFRGTSHHNSNICIDFV-SETEANV 89 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHTTTHHHHEEEEEEEEEEEEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHhhccCceEEEccCCCCCCCHHHHHHHHHHhhcccCceEEecCCEEEEEc-CCCEEEE
Confidence 3446789999999997 5799999999999988754 4578999999988775 23467888887666554 2232222
Q ss_pred EEEEEE--EEcCCCCc-eee-EEEEEEeeCCCCcEEEEceeEEe
Q 033171 83 FVSGSL--QLAGEDHH-LRF-SQMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 83 ~V~G~~--~~~~~~~~-~~F-~qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
...-.+ ...+.... ... -....+.+.+ ++|.|..-.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~gry~d~~~r~d-g~Wri~~r~~~~ 132 (150)
T 3ef8_A 90 RSVVLAIHRYTKERPDGILYGQYFDTVVKVD-GQWKFKRRELRT 132 (150)
T ss_dssp EEEEEEEEEESSSSCCEEEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEEEEEEEccCCCCeEEEEEEEEEEEEEEC-CEEEEEEEEEEe
Confidence 222111 12222211 111 1222344555 899998766643
No 55
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=95.30 E-value=0.26 Score=31.48 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc-C-ce-------ecCHHHHHHHHhcCC
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE-G-QK-------FFGVDDISTKFNQLP 58 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~-g-~~-------~~G~~~I~~~l~~lp 58 (125)
+-....+..||..++. +.+.+..+|.+++.+... | .+ ..|+++|.+.+..+.
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~ 68 (139)
T 2a15_A 7 SPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHI 68 (139)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhc
Confidence 3456778999999986 678999999999988643 2 23 799999999998765
No 56
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=95.27 E-value=0.33 Score=32.28 Aligned_cols=49 Identities=27% Similarity=0.509 Sum_probs=40.1
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEcC------ceecCHHHHHHHHhcCC
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG------QKFFGVDDISTKFNQLP 58 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g------~~~~G~~~I~~~l~~lp 58 (125)
++.++.||..+++ +.+.|..+|.+++.+...+ ....|+++|.+.+..+.
T Consensus 26 ~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~ 81 (163)
T 1z1s_A 26 KEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFP 81 (163)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHH
Confidence 4567888888886 6789999999999987652 24789999999998875
No 57
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=95.23 E-value=0.13 Score=35.35 Aligned_cols=99 Identities=15% Similarity=0.084 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhhccccChhhhcccccCCce---EEE-cCc--eecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCC-C
Q 033171 6 ELVGKTFVGHYYHLFDNDRASLSSLYQPTSM---LTF-EGQ--KFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPST-G 78 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~~r~~L~~~Y~~~S~---~t~-~g~--~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~-~ 78 (125)
.+--++-|++|+.++.++++.+..||.+++. +.- .|. ...|+++|.+.+..++-.--......+..+++ .+ +
T Consensus 18 r~~Nr~vV~~~l~~~~~D~~~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~~~~~~~~~~~~i~~t-~Dpd 96 (163)
T 3ff0_A 18 RRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFET-DDPN 96 (163)
T ss_dssp HHHHHHHHHHHHTCCGGGGGGGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHHHSTTCEEEEEEEEEB-SSTT
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHhhCCCceeeeEEEEEc-CCCC
Confidence 3445678899999998899999999999988 542 243 47899999998876540000134555667776 44 3
Q ss_pred cEEEEEEEEEEE--cCCC---CceeeEEEEEE
Q 033171 79 GLLIFVSGSLQL--AGED---HHLRFSQMFHL 105 (125)
Q Consensus 79 ~ilI~V~G~~~~--~~~~---~~~~F~qtF~L 105 (125)
.+++-..|.-+. .+.+ -...|...|.+
T Consensus 97 ~vvvE~~~~g~i~~tG~~~~~y~~~yi~v~~v 128 (163)
T 3ff0_A 97 HFWVECDGHGKILFPGYPEGYYENHFLHSFEL 128 (163)
T ss_dssp EEEEEEEEEEEECCTTSCCEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEEcCCCcccccEEEeEEEEEEE
Confidence 566555555444 3443 22445555554
No 58
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=95.23 E-value=0.34 Score=31.29 Aligned_cols=108 Identities=9% Similarity=-0.004 Sum_probs=68.6
Q ss_pred HHHHHHHHhhcccc--ChhhhcccccCCceEEEcCceecCHHHHHHHHhcCC--CCcceEEeEEeeeeecCCCCcEEEEE
Q 033171 9 GKTFVGHYYHLFDN--DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLP--FDQCRHMISTIDSQPCPSTGGLLIFV 84 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~--~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp--~~~~~~~i~s~D~q~~~~~~~ilI~V 84 (125)
...+++.+++.... +-+.|...|.++..|.-.+-...|.+++.+.|.+.- +......|..+..... .+++.++.-
T Consensus 12 ~~~~ie~W~~~~~~~~dl~~l~a~~a~d~~mv~p~G~~~g~~~~~~~~~~~~g~~pgl~i~i~~l~~~~~-~~d~~vv~y 90 (128)
T 1tp6_A 12 AHVAIRDWLAGDSRADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPGLRIEIDGESLLAS-GVDGATLAY 90 (128)
T ss_dssp HHHHHHHHHHTCCCTTHHHHHHTTEEEEEEEECTTSCEEEHHHHHHHHHHHTTCSTTCEEEEEEEEEEEE-ETTEEEEEE
T ss_pred HHHHHHHHHcCCCcHhHHHHHHHhcCCCEEEECCCCeECCHHHHHHHHHHhhCCCCCeEEEEEEEEEEee-cCCEEEEEE
Confidence 45566677765544 457888999999999876667889999999887532 1145555555555443 355666664
Q ss_pred EEEEEEcCCCCceeeEEEEEEeeCCCC--cEEEEcee
Q 033171 85 SGSLQLAGEDHHLRFSQMFHLIPTPRG--SFAVQNDI 119 (125)
Q Consensus 85 ~G~~~~~~~~~~~~F~qtF~L~~~~~~--~y~I~nD~ 119 (125)
.+.=..++.. ....+ |.++.+..+| .|.+.-+.
T Consensus 91 ~~~~~~~~~~-~~rrs-T~v~~~~~~g~~~W~~lHET 125 (128)
T 1tp6_A 91 REIQSDAAGR-SERLS-TVVLHRDDEGRLYWRHLQET 125 (128)
T ss_dssp EEEEEETTEE-EEEEE-EEEEEECTTCCEEEEEEEEE
T ss_pred EEEeccCCce-eEEEE-EEEEEeCCCCCEEEEEEEEE
Confidence 4333333332 45566 7788666446 48776654
No 59
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=95.08 E-value=0.39 Score=31.15 Aligned_cols=104 Identities=10% Similarity=0.027 Sum_probs=60.6
Q ss_pred HHHHHHhhccc-cChhhhcccccCCce-EEE-cCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEEEEEEEE
Q 033171 11 TFVGHYYHLFD-NDRASLSSLYQPTSM-LTF-EGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLLIFVSGS 87 (125)
Q Consensus 11 ~Fv~~YY~~l~-~~r~~L~~~Y~~~S~-~t~-~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~ilI~V~G~ 87 (125)
.....|+..++ ++.+.|..+|.++.. +.+ .|....|.++|......++-...++.+.....+.. .+. ..+.+ ..
T Consensus 15 ~~~~~y~~Al~~~D~~~L~~lf~~d~~~v~~~~g~~l~G~~~I~a~r~~~~~~~~~~~~~~~~i~~~-g~d-~A~~~-~~ 91 (129)
T 2owp_A 15 AAFVEYERALVENDIEAMNALFWHTPETVRYGIAEVQHGGEAIRAWRERCEPVPKSRKLHRTVVTTF-GTD-FATVS-TE 91 (129)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTBCCSTTCEEECSSCEEESHHHHHHHHHHSCCCCTTCEEEEEEEEEE-TTT-EEEEE-EE
T ss_pred HHHHHHHHHHHhCCHHHHHhhccCCCcEEEeCCCCccCCHHHHHHHHHhcCCCCCceeecccEEEEe-cCC-EEEEE-EE
Confidence 44566677776 578999999999875 333 35688999999997776652223445555445444 212 33322 23
Q ss_pred EEEcCCCCceeeEEEEEEeeCC-CCcEEEEcee
Q 033171 88 LQLAGEDHHLRFSQMFHLIPTP-RGSFAVQNDI 119 (125)
Q Consensus 88 ~~~~~~~~~~~F~qtF~L~~~~-~~~y~I~nD~ 119 (125)
+...+.+..-.++|++ .+.+ +++|.|...=
T Consensus 92 ~~~~~~~~~gr~t~vw--~r~~~~~gWrIv~~H 122 (129)
T 2owp_A 92 FTSDATPLLGRQMQTW--ARLSPADGWKIVAAH 122 (129)
T ss_dssp EEETTEEEEEEEEEEE--EECSTTTCEEEEEEE
T ss_pred EEECCCCcceEEEEEE--EECCCCCCEEEEEee
Confidence 4444332122345554 4433 1789987653
No 60
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.01 E-value=0.056 Score=34.56 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEc-----CceecCHHHHHHHHhc---CCCCcceEEeEE
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE-----GQKFFGVDDISTKFNQ---LPFDQCRHMIST 68 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~-----g~~~~G~~~I~~~l~~---lp~~~~~~~i~s 68 (125)
-.++.++.||..++. +.+.|..+|.++..+... |.++.|+++|.+.+.. .| ...+.+..
T Consensus 18 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~~~~~~--~~~~~i~~ 85 (129)
T 3fh1_A 18 QTAEIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSAIATQP--GTRFDLEE 85 (129)
T ss_dssp HHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHHHHHCT--TCEEEEEE
T ss_pred hHHHHHHHHHHHHHccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHHHhcCC--CceEEEeE
Confidence 356889999999875 689999999999998764 4677999999998864 34 44455543
No 61
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=94.97 E-value=0.4 Score=30.76 Aligned_cols=110 Identities=10% Similarity=-0.013 Sum_probs=60.7
Q ss_pred HHHHHHHHhhccc-cChhhhcccccCCceEEEcCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEEEEEEEE
Q 033171 9 GKTFVGHYYHLFD-NDRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLLIFVSGS 87 (125)
Q Consensus 9 ~~~Fv~~YY~~l~-~~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~ilI~V~G~ 87 (125)
-....+.|+..+. ++.+.|..++.++..+...+-...++++..+.+.+-+.......+.....+.. .++..++...-.
T Consensus 16 I~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~G~~~~~~~~l~~~~~g~~~~~~~~~~~~~v~~~-g~d~Avv~~~~~ 94 (134)
T 3fsd_A 16 IAFYEERLRAAMLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRAGLLKLSRLDLSDAVVRAA-GEDGRVVVVRAV 94 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCEEEEEEEEEEEEEEES-STTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCcCccHHHHHHHHHcCCceEEEEEEeccEEEEe-CCCEEEEEEEEE
Confidence 3445566666555 68999999999998877654444566666666664221123445666666666 333333333222
Q ss_pred EEE--cCCCCceeeEEEEEEeeCCCCc--EEEEceeE
Q 033171 88 LQL--AGEDHHLRFSQMFHLIPTPRGS--FAVQNDIF 120 (125)
Q Consensus 88 ~~~--~~~~~~~~F~qtF~L~~~~~~~--y~I~nD~f 120 (125)
+.. ++.+....+-+|-+..+.+ ++ |.|...-.
T Consensus 95 ~~~~~~g~~~~~~~~~t~vw~k~~-g~~gWriv~~h~ 130 (134)
T 3fsd_A 95 TAGVYDGEAFTETLRFTRIWRRTQ-GPAGWKLVAGHC 130 (134)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEET-TTTEEEEEEEEE
T ss_pred EEEEeCCcEEEEEEEEEEEEEECC-CCccceEeEeEE
Confidence 222 2322112233344444555 67 99876543
No 62
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=94.79 E-value=0.014 Score=38.72 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC--ceecCHHHHHHHHhcCC
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG--QKFFGVDDISTKFNQLP 58 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g--~~~~G~~~I~~~l~~lp 58 (125)
.......+..||..+++ +.+.|..+|.+++.+.-.. .++.|+++|.+.|..+-
T Consensus 8 ~~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~~ 63 (143)
T 3mso_A 8 EANAAATLAEWHGLIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVL 63 (143)
T ss_dssp CHHHHHHHHHHHHHHHTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHHH
Confidence 34567889999999986 6799999999999998644 78999999999887653
No 63
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=94.59 E-value=0.52 Score=30.34 Aligned_cols=50 Identities=16% Similarity=0.246 Sum_probs=42.0
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEEcC-ceecCHHHHHHHHhcCC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-QKFFGVDDISTKFNQLP 58 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l~~lp 58 (125)
.++.++.||..+++ +.+.+..+|.+++.+...| ....|+++|.+.+..+.
T Consensus 24 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~~~~~~~~G~~~i~~~~~~~~ 75 (149)
T 1nww_A 24 DEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLF 75 (149)
T ss_dssp HHHHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHhCCCEEEEcCCCCCccCHHHHHHHHHHHH
Confidence 46678889988886 6799999999999988765 46889999999998765
No 64
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=94.59 E-value=0.45 Score=29.55 Aligned_cols=57 Identities=11% Similarity=0.018 Sum_probs=40.6
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhc----CCCCcceEEeEE
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQ----LPFDQCRHMIST 68 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 68 (125)
.+.|+.||..++. +.+.+..+|.++...... +....|+++|.+.+.. .| ..++++..
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p--~~~~~i~~ 68 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWP--QNHAEIKD 68 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHHCT--TCEEEEEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhhCC--CceEEEEE
Confidence 3567788888875 678899999988665332 4578999999988765 35 44555544
No 65
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=94.53 E-value=0.36 Score=31.97 Aligned_cols=109 Identities=11% Similarity=0.030 Sum_probs=69.6
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceE-EE--cCceecCHHHHHHHHhcCCCCcceEEeEEeeeeecCCCCcEEEE-
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSML-TF--EGQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCPSTGGLLIF- 83 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~-t~--~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~~~~~ilI~- 83 (125)
-.+.++++...+.+ +.+.+.++|+++-.+ .+ .|+.+.|.+.+...+...+.+.....+.....+.. .++..++.
T Consensus 14 I~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f~~~~~~~~~~~~~~~~V~~~-g~d~Av~~y 92 (143)
T 2f86_B 14 IVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGNRKNQVHTTMLNPNVHII-GEDAACVAY 92 (143)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSCSCCSCEEEEEEEEEEEE-TTTEEEEEE
T ss_pred HHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHHhcccCCcceeEEEcceEEEe-CCCEEEEEE
Confidence 34678888888764 789999999988765 34 47788999998876655332245556666666665 32322222
Q ss_pred E--EEEEEEcCCCCceeeEEEEEEeeCCCCcEEEEcee
Q 033171 84 V--SGSLQLAGEDHHLRFSQMFHLIPTPRGSFAVQNDI 119 (125)
Q Consensus 84 V--~G~~~~~~~~~~~~F~qtF~L~~~~~~~y~I~nD~ 119 (125)
+ ++....++.+....+-.|.++.+.+ |+|.|...=
T Consensus 93 ~~~~~~~~~~G~~~~~~~r~T~V~~k~~-g~WkivH~H 129 (143)
T 2f86_B 93 VKLTQFLDRNGEAHTRQSQESRVWSKKQ-GRWVCVHVH 129 (143)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEEEET-TEEEEEEEE
T ss_pred EeeeeeccCCCCeeeEEEEEEEEEEEeC-CcEEEEEEe
Confidence 1 2222223333234577888888887 999997653
No 66
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=94.47 E-value=0.1 Score=33.55 Aligned_cols=49 Identities=22% Similarity=0.251 Sum_probs=38.7
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEcC-----ceecCHHHHH-HHHhcCC
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-----QKFFGVDDIS-TKFNQLP 58 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-----~~~~G~~~I~-~~l~~lp 58 (125)
.+.|+.||..+++ +.+.+..+|.++..+...+ ....|+++|. +.+..+.
T Consensus 15 ~~~v~~~~~a~~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~ 70 (140)
T 3ec9_A 15 YQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLG 70 (140)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHHH
Confidence 5678888888875 6799999999999987664 3678999996 5676653
No 67
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=94.36 E-value=0.045 Score=34.98 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=45.9
Q ss_pred HHHHHHHhhcccc-C----hhhhcccccCCceEEEcCceecCHHHHHHHHhc----CCCCcceEEeE-Eeeeee
Q 033171 10 KTFVGHYYHLFDN-D----RASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQ----LPFDQCRHMIS-TIDSQP 73 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~----r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~-s~D~q~ 73 (125)
+..+++|...++. + .+.|..+|.+++.+.-...++.|+++|.+.+.. .| ..++.+. .++.++
T Consensus 6 ~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D~~~~dP~~~~~G~~ai~~~~~~~~~~~~--~~~f~~~~~~~~~~ 77 (121)
T 3dxo_A 6 LTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFP--GYRFVLAGTPDGHG 77 (121)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHST--TCEEEEEEEEEEET
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhcCCCeEEECCCCCcCCHHHHHHHHHHHHHHCC--CcEEEEccCcceeC
Confidence 4556666666654 2 357999999999998877789999999997754 45 6777776 566554
No 68
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=94.35 E-value=0.37 Score=30.14 Aligned_cols=49 Identities=6% Similarity=-0.024 Sum_probs=38.2
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEE-cC-ceecCHHHHHHHHhcC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF-EG-QKFFGVDDISTKFNQL 57 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~-~g-~~~~G~~~I~~~l~~l 57 (125)
....++.||..++. +.+.+..+|.+++.+.. .| ....|+++|.+.+..+
T Consensus 5 ~~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~ 56 (123)
T 2k54_A 5 IELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIER 56 (123)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHH
Confidence 34567888888875 67899999999997754 34 3589999999988754
No 69
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=94.11 E-value=0.19 Score=32.99 Aligned_cols=49 Identities=16% Similarity=0.312 Sum_probs=39.2
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc-----eecCHHHHHHHHhcC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ-----KFFGVDDISTKFNQL 57 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~-----~~~G~~~I~~~l~~l 57 (125)
.++.|+.||..+.+ +.+.|..+|.++..+...|. +..|+++|.+.+..+
T Consensus 22 n~~~v~~~~~a~~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~ 76 (148)
T 3g8z_A 22 TIDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKM 76 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHH
Confidence 35677888887775 67889999999999888764 368999999987754
No 70
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=94.09 E-value=0.19 Score=37.03 Aligned_cols=53 Identities=15% Similarity=0.233 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhcCC
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~lp 58 (125)
.+-.+..++.|+..+++ +.+.|..+|.+++.+... ..+..|+++|.+.|..+-
T Consensus 5 ~~~~~~~v~~~~~~~~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~~ 60 (283)
T 3rga_A 5 ETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPAL 60 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHHH
Confidence 34467889999999985 789999999999999865 457899999999998653
No 71
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=93.87 E-value=0.51 Score=31.03 Aligned_cols=96 Identities=10% Similarity=0.113 Sum_probs=61.3
Q ss_pred cChhhhcccccCCceEEE--cCceecCHHHHHHHHhcCCC-CcceEEeEEeeeeecCCCCcEEEEEEEEEEEcCCCCcee
Q 033171 22 NDRASLSSLYQPTSMLTF--EGQKFFGVDDISTKFNQLPF-DQCRHMISTIDSQPCPSTGGLLIFVSGSLQLAGEDHHLR 98 (125)
Q Consensus 22 ~~r~~L~~~Y~~~S~~t~--~g~~~~G~~~I~~~l~~lp~-~~~~~~i~s~D~q~~~~~~~ilI~V~G~~~~~~~~~~~~ 98 (125)
.+.+.+..+|+++.++-= .++.+.|.+++...|..++- ..+.+++.....+-. .+..++-... ....++. ...
T Consensus 30 gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~~~~~~~~~~ei~~p~V~v~-gD~A~~~y~l-~~~~~~~--~~~ 105 (134)
T 3ke7_A 30 TDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQLPPADHFDMIRPVVQVA-QNIAVLTFNL-DSYLSDK--VIK 105 (134)
T ss_dssp SCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCCCCSEEEEEEEEEEEE-TTEEEEEEEE-EEEETTE--EEE
T ss_pred CCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHhcccCCcceEEEeCCeEEEe-CceEEEEEEE-EEeeCCC--cEE
Confidence 478999999999877521 23568899999999988541 124566766555554 3333332111 1112222 456
Q ss_pred eEEEEEEeeCCCCcEEEEceeEE
Q 033171 99 FSQMFHLIPTPRGSFAVQNDIFR 121 (125)
Q Consensus 99 F~qtF~L~~~~~~~y~I~nD~fr 121 (125)
.-.|.+..+.++|+|.|...=..
T Consensus 106 ~r~T~V~~r~~dG~W~ivH~H~S 128 (134)
T 3ke7_A 106 WNCTEVYRRNPDNQWKIIQTHWS 128 (134)
T ss_dssp EEEEEEEEECTTSBEEEEEEEEE
T ss_pred EEEEEEEEEcCCCcEEEEEEeec
Confidence 78899999993499999876443
No 72
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=93.80 E-value=0.96 Score=33.14 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhcCC
Q 033171 5 TELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~lp 58 (125)
.++-.+..++.||..+++ +.+.|..+|.+++.+... +.+..|+++|.+.+..+.
T Consensus 136 ~~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~ 192 (283)
T 3rga_A 136 DEERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAV 192 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhh
Confidence 355678899999999986 789999999999998865 357899999999998765
No 73
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=93.57 E-value=0.87 Score=29.11 Aligned_cols=51 Identities=16% Similarity=0.294 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEc----Cc--eecCHHHHHHHHhcCC
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE----GQ--KFFGVDDISTKFNQLP 58 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~----g~--~~~G~~~I~~~l~~lp 58 (125)
-.+..++.||..+++ +.+.+..+|.+++.+... |. ...|+++|.+.+..+.
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~ 68 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYP 68 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhh
Confidence 346678889988875 679999999999998774 42 5799999999998764
No 74
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=93.44 E-value=0.84 Score=28.56 Aligned_cols=49 Identities=18% Similarity=0.267 Sum_probs=39.5
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEcC--------ceecCHHHHHHHHhcCC
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG--------QKFFGVDDISTKFNQLP 58 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g--------~~~~G~~~I~~~l~~lp 58 (125)
.+-++.||..+++ +.+.+..+|.++......+ ....|+++|.+.+..+.
T Consensus 6 ~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~ 63 (132)
T 3ebt_A 6 MQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVP 63 (132)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHH
Confidence 4557778888875 6799999999999887753 47889999999988775
No 75
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=93.39 E-value=0.085 Score=33.61 Aligned_cols=51 Identities=10% Similarity=0.202 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc-----eecCHHHHHHHHhcCC
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ-----KFFGVDDISTKFNQLP 58 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~-----~~~G~~~I~~~l~~lp 58 (125)
-.++.++.||..+++ +.+.+..+|.++..+...+. ...|+++|.+.+..+.
T Consensus 6 ~~~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~ 62 (135)
T 3fgy_A 6 ENVQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKAS 62 (135)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHH
Confidence 346678888888875 68999999999998877662 5689999999888764
No 76
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=93.12 E-value=0.83 Score=29.86 Aligned_cols=94 Identities=4% Similarity=-0.033 Sum_probs=54.7
Q ss_pred HHHHHHHhhccccCh--hhhcccccCCceEEEcC----ceecCHHHHHHHHhcCCCCcceEEeEEeee--eecCCCCcEE
Q 033171 10 KTFVGHYYHLFDNDR--ASLSSLYQPTSMLTFEG----QKFFGVDDISTKFNQLPFDQCRHMISTIDS--QPCPSTGGLL 81 (125)
Q Consensus 10 ~~Fv~~YY~~l~~~r--~~L~~~Y~~~S~~t~~g----~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~--q~~~~~~~il 81 (125)
++-++.|+..+.+.+ +.|..+|.+++.+.-+. ....|+++|.+.++.+. . ...+..++. ... .++.+.
T Consensus 23 kevv~r~~e~~~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~--~-~~~~~~~~i~~~~v-~gd~v~ 98 (136)
T 3hk4_A 23 AEIAKDFTELLKQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQ--E-NHEVHGGSVEGPYV-NGDQFA 98 (136)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHH--H-TEEEEEEEEEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHH--h-cCCeeeeeecceEE-cCCEEE
Confidence 345566677776653 45799999999987652 25789999999887654 1 122222222 222 234455
Q ss_pred EEEEEEEEEcCCCCceeeEEEEEEee
Q 033171 82 IFVSGSLQLAGEDHHLRFSQMFHLIP 107 (125)
Q Consensus 82 I~V~G~~~~~~~~~~~~F~qtF~L~~ 107 (125)
+.-+...+......+..+...-++.-
T Consensus 99 v~~~~~gth~~tG~~i~~~~i~v~rv 124 (136)
T 3hk4_A 99 LRFKFDVTPKATGERVTMDEVGLYTV 124 (136)
T ss_dssp EEEEEEEEETTTCCCEEEEEEEEEEE
T ss_pred EEEEEEEEECCCCcEEEEEEEEEEEE
Confidence 54444444442223566666655554
No 77
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=93.07 E-value=0.18 Score=33.62 Aligned_cols=51 Identities=16% Similarity=0.218 Sum_probs=42.6
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEE--cCceecCHHHHHHHHhcCC
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTF--EGQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~--~g~~~~G~~~I~~~l~~lp 58 (125)
...++...|-..|.. +.+.|.+||..+|.+.= .|....|+..|.++|+.-.
T Consensus 21 ~EqqlA~~Yi~AlT~hDy~~L~~FynrdsVf~D~ta~~~YtG~r~Ii~Fl~RaH 74 (154)
T 3gzb_A 21 QEQQLAVKYMDALTEHDYKTLITFYNRDSIFFDKTANRKYTGGRFIIDFLERAH 74 (154)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTCCTTCEEEETTTTEEEESHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHhCccceeeeeccCcceeCcHHHHHHHHHHh
Confidence 345677788888876 89999999999999975 4789999999999998643
No 78
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=92.81 E-value=0.68 Score=30.24 Aligned_cols=51 Identities=20% Similarity=0.318 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc-----eecCHHHHHHHHhcC
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ-----KFFGVDDISTKFNQL 57 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~-----~~~G~~~I~~~l~~l 57 (125)
+-....++.||..+++ +.+.+..+|.++..+...+. ...|+++|.+.+..+
T Consensus 29 ~~~~~~v~~~~~a~~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~ 85 (156)
T 1tuh_A 29 EQNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRY 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHH
Confidence 3456788999998886 67899999999988877654 368999999888764
No 79
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=92.02 E-value=1.2 Score=27.92 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=37.5
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEcC-----ceecCHHHHHH-HHhcCC
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-----QKFFGVDDIST-KFNQLP 58 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-----~~~~G~~~I~~-~l~~lp 58 (125)
.+.|+.||..+++ +.+.+..+++++......+ ....|+++|.+ .+..+.
T Consensus 7 ~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~ 62 (134)
T 3grd_A 7 LEIIRSTYEGSASSNAKHLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRLG 62 (134)
T ss_dssp HHHHHTTTSSCHHHHHHHHHHHEEEEEEEEECTTSTTCEEEESHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcCCCeEEEecCCcccCcEEeCHHHHHHHHHHHHH
Confidence 4567888888875 5788999999999877665 25789999985 566543
No 80
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=91.89 E-value=0.16 Score=33.30 Aligned_cols=59 Identities=12% Similarity=0.221 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhc----CCCCcceEEeEE
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQ----LPFDQCRHMIST 68 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 68 (125)
-.+..++.||..++. +.+.+..+|.++..+...+....|+++|.+.+.. +| ..++.+..
T Consensus 5 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~~~~~~~G~~~~~~~~~~~~~~~~--~~~~~i~~ 68 (152)
T 2gex_A 5 ANKERCLEMVAAWNRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFP--DLRLDVRS 68 (152)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCT--TCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEeCCCCCCCCHHHHHHHHHHHHHhCC--CcEEEEEE
Confidence 346778888888875 5688999999998776534578899999887765 45 55566655
No 81
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=91.48 E-value=2.3 Score=28.90 Aligned_cols=71 Identities=17% Similarity=0.288 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc---C------ceecCHHHHHHHHhcC-C----CCcceEEeEE
Q 033171 4 QTELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE---G------QKFFGVDDISTKFNQL-P----FDQCRHMIST 68 (125)
Q Consensus 4 ~~~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~---g------~~~~G~~~I~~~l~~l-p----~~~~~~~i~s 68 (125)
...+.-..++..|...+|. +.+.+..+|.+++.+.+. | ....|+++|.+.+... + +..++|.+..
T Consensus 23 ~d~~~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n 102 (179)
T 3ejv_A 23 ADETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNA 102 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEE
T ss_pred chHHHHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCC
Confidence 3445567889999999996 679999999999998764 3 2678999999998653 2 3467888887
Q ss_pred eeeeec
Q 033171 69 IDSQPC 74 (125)
Q Consensus 69 ~D~q~~ 74 (125)
......
T Consensus 103 ~~I~vd 108 (179)
T 3ejv_A 103 PIIVIE 108 (179)
T ss_dssp EEEEEE
T ss_pred CEEEEc
Confidence 665444
No 82
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=91.39 E-value=0.13 Score=32.50 Aligned_cols=50 Identities=6% Similarity=0.071 Sum_probs=42.5
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcCC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLP 58 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp 58 (125)
.++-|+.||..+++ +.+.|..++.++..+..++....|++++.+.+..+.
T Consensus 8 ~~~~v~~f~~A~~~gD~~~l~~lla~Dvv~~~~~g~~~G~~~v~~~~~~~~ 58 (114)
T 3f40_A 8 TRDLVLEFIHALNTENFPAAKKRLNENFTFNGPMGHREGSERYMNDMEKMK 58 (114)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEETTEEEESHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCcccCHHHHHHHHHHHH
Confidence 45567777888875 689999999999998888888999999999998876
No 83
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=91.36 E-value=0.94 Score=29.97 Aligned_cols=61 Identities=7% Similarity=0.037 Sum_probs=43.5
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC-ceecCHHHHHHHHhcCC--CCcceEEeEE
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG-QKFFGVDDISTKFNQLP--FDQCRHMIST 68 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l~~lp--~~~~~~~i~s 68 (125)
--+..++.||..+++ +.+.+..+|.++....... ....|++++.+.+..+. +...++.+..
T Consensus 35 ~n~~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~g~~~G~e~~~~~~~~~~~~~pd~~~~i~~ 99 (159)
T 3k0z_A 35 EMVHAAQRFYAFWDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFAAQNFRKIVPNIHCEIED 99 (159)
T ss_dssp HHHHHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCTTCCSSHHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 346789999999986 6788999999987765432 36789999988776431 2155555554
No 84
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=90.88 E-value=0.68 Score=29.82 Aligned_cols=59 Identities=14% Similarity=0.180 Sum_probs=44.9
Q ss_pred HHHHHHHHhh-cccc-C--hhhhcccccCCceEEEcC-ceecCHHHHHHHHhc----CCCCcceEEeEEe
Q 033171 9 GKTFVGHYYH-LFDN-D--RASLSSLYQPTSMLTFEG-QKFFGVDDISTKFNQ----LPFDQCRHMISTI 69 (125)
Q Consensus 9 ~~~Fv~~YY~-~l~~-~--r~~L~~~Y~~~S~~t~~g-~~~~G~~~I~~~l~~----lp~~~~~~~i~s~ 69 (125)
.++.|+.||. .++. + .+.+..+|.++..+..++ ....|++++.+.+.. +| ..++.+..+
T Consensus 11 n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d~~~~~~~~~~~~G~~~~~~~~~~~~~~~p--d~~~~i~~~ 78 (146)
T 3kkg_A 11 NVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFP--RLEVVVENV 78 (146)
T ss_dssp HHHHHHGGGTTTSTTSTTHHHHHHHHEEEEEEEEETTSCCEESHHHHHHHHHHHHHHST--TCEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCC--CceeEEEEE
Confidence 4678899999 7875 5 688999999998887655 478999999887764 45 566666543
No 85
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=90.79 E-value=0.36 Score=31.82 Aligned_cols=60 Identities=10% Similarity=0.100 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcCC--CCcceEEeEE
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLP--FDQCRHMIST 68 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp--~~~~~~~i~s 68 (125)
-.++.++.||..++. +.+.+..+|.++..+... ....|++++.+.+..+- +...++++..
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D~v~~~p-~~~~G~~~~~~~~~~~~~~~~~~~~~i~~ 67 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE-DNEVSSADMVKLMEGGLKAFPDLQLEVKS 67 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEEEEEEET-TEEECHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCCeEEeCC-CCCCCHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 346778889988875 678899999999887764 46799999998776531 1155666655
No 86
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=90.77 E-value=0.13 Score=33.38 Aligned_cols=60 Identities=8% Similarity=0.198 Sum_probs=42.6
Q ss_pred HHHHHHHHHhh-cccc-ChhhhcccccCCceEEEcC-----ceecCHHHHHHHHhc----CCCCcceEEeEEe
Q 033171 8 VGKTFVGHYYH-LFDN-DRASLSSLYQPTSMLTFEG-----QKFFGVDDISTKFNQ----LPFDQCRHMISTI 69 (125)
Q Consensus 8 i~~~Fv~~YY~-~l~~-~r~~L~~~Y~~~S~~t~~g-----~~~~G~~~I~~~l~~----lp~~~~~~~i~s~ 69 (125)
-.++.|+.||. .++. +.+.+..+|.++..+.++. ....|++++.+.+.. +| ..++.+..+
T Consensus 7 ~~~~~v~~~~~~~~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~p--d~~~~i~~~ 77 (146)
T 3f9s_A 7 KAKEILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFP--DQCFDIQGL 77 (146)
T ss_dssp THHHHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHST--TCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCC--CcEEEEEEE
Confidence 34667788885 7764 6788999999998844542 257899999887764 45 566666543
No 87
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=90.60 E-value=0.24 Score=33.08 Aligned_cols=51 Identities=8% Similarity=0.130 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhcC
Q 033171 7 LVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQL 57 (125)
Q Consensus 7 ~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~l 57 (125)
+.++.+++.|+..+.+ +.+.|..+|.+++.+.-. ..++.|+++|...|..+
T Consensus 20 ~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~ 73 (148)
T 3f8x_A 20 AAVQSGLQEWHRIIAEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAV 73 (148)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 6778999999999986 679999999999998754 45789999999998765
No 88
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=90.30 E-value=1.5 Score=28.67 Aligned_cols=47 Identities=13% Similarity=0.284 Sum_probs=38.0
Q ss_pred HHHHHHhhcccc-ChhhhcccccCCceEEE-cCceecCHHHHHHHHhcC
Q 033171 11 TFVGHYYHLFDN-DRASLSSLYQPTSMLTF-EGQKFFGVDDISTKFNQL 57 (125)
Q Consensus 11 ~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~-~g~~~~G~~~I~~~l~~l 57 (125)
+.|+.||..+++ +.+.+..+|.++..... .+....|+++|.+.+..+
T Consensus 22 ~~v~~~~~a~n~~D~~~l~~l~a~D~v~~~~~~~~~~G~e~i~~~~~~~ 70 (150)
T 3f8h_A 22 DTIARYFDAFNAGDTDGMLACLSEDVAHHVNEGNIRVGKEKFAAFCAHM 70 (150)
T ss_dssp CHHHHHHHHHHHTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHcCCCeEEeCCCCcceeCHHHHHHHHHHH
Confidence 467889999985 78999999999998432 356789999999988854
No 89
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=90.17 E-value=0.88 Score=28.58 Aligned_cols=54 Identities=13% Similarity=0.251 Sum_probs=39.9
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhc----CCCCcceEEeEE
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQ----LPFDQCRHMIST 68 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 68 (125)
+..++.||+.+++ +.+.+..+|.++.. |.| ...|++++.+.+.. +| ..+++|..
T Consensus 6 ~~~v~~~~~~~~~~d~~~~~~~~a~d~~--~~~-~~~G~~~~~~~~~~~~~~~p--d~~~~i~~ 64 (128)
T 3ehc_A 6 NDIYLAYLDSLNHQAFDELGTFVDDNVE--HNG-RPFGLSGYRDMLVKDFADIP--DLRFEAEI 64 (128)
T ss_dssp HHHHHHHHHHHHTTCGGGGGGTEEEEEE--ETT-BCCHHHHHHHHHHHHHHHCT--TCCCCEEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcCcceE--eCC-CCCCHHHHHHHHHHHHhhCC--CceEEEEE
Confidence 5677888888875 57889999999875 455 67899998887764 55 55555554
No 90
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=87.26 E-value=0.63 Score=31.49 Aligned_cols=53 Identities=17% Similarity=0.355 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCceEEEcC----ceecCHHHHHHHHhcCC
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEG----QKFFGVDDISTKFNQLP 58 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g----~~~~G~~~I~~~l~~lp 58 (125)
.+..+..|+.||..+++ +.+.|..++.+++.+-.++ ....|+++|.+.+..+.
T Consensus 9 ~~~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~ 66 (156)
T 3g16_A 9 RAAMEKVIRTYYDGCNEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAV 66 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHH
Confidence 35578889999999986 6899999999999987643 35789999999998765
No 91
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=84.26 E-value=4.9 Score=25.30 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=36.0
Q ss_pred HHHHHHHHhhcccc-ChhhhcccccCCceEEEcCc-e-ecCHHHHHHHHhcC
Q 033171 9 GKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQ-K-FFGVDDISTKFNQL 57 (125)
Q Consensus 9 ~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~-~-~~G~~~I~~~l~~l 57 (125)
.++.++.||..+++ +.+.+..+|.++......+. . ..|+++|.+.+..+
T Consensus 4 ~~~~v~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~ 55 (144)
T 1sjw_A 4 QTEIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWV 55 (144)
T ss_dssp HHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHH
Confidence 35678888888875 67899999999876543332 2 38999999887764
No 92
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=83.61 E-value=7.1 Score=25.41 Aligned_cols=63 Identities=13% Similarity=0.182 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhh-cccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhcCC--CCcceEEeEE
Q 033171 5 TELVGKTFVGHYYH-LFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQLP--FDQCRHMIST 68 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~-~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~lp--~~~~~~~i~s 68 (125)
..+-.++.|+.||. .+++ +.+.+..+|.++.... +.....|++++.+.+..+. +...++.|..
T Consensus 25 ~~~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~v~h-~P~~~~G~e~~~~~~~~~~~~~pd~~~~i~~ 91 (148)
T 3g0k_A 25 EEQANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQH-SSLAEPSVEALKGFLDRVRAESPDARQTIHR 91 (148)
T ss_dssp HHHHHHHHHHHHHHHTTTTTCGGGGGGTEEEEEEEC-CSSSCSSHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhcCCHHHHHHhcCcCeEEc-CCCCCCCHHHHHHHHHHHHHhCCCceEEEEE
Confidence 34556788999998 7764 6788999999885443 3234589999988776542 1144555544
No 93
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=83.22 E-value=0.18 Score=33.12 Aligned_cols=50 Identities=8% Similarity=0.040 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCce--ecCHHHHHHHHhcC
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQK--FFGVDDISTKFNQL 57 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~--~~G~~~I~~~l~~l 57 (125)
-.+..++.||..+++ +.+.+..+|.++..+...+.. ..|+++|.+.+..+
T Consensus 12 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~ 64 (153)
T 2f99_A 12 EQIAAVRRMVEAYNTGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWV 64 (153)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHH
Confidence 346778889998875 678899999998765443332 48999999987754
No 94
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=82.42 E-value=1.6 Score=28.19 Aligned_cols=47 Identities=15% Similarity=0.193 Sum_probs=37.2
Q ss_pred HHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHH----HHhcCC
Q 033171 12 FVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDIST----KFNQLP 58 (125)
Q Consensus 12 Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~----~l~~lp 58 (125)
-|+.-...+.. +=+.|...|.+++.+.|. +....|++++.+ .+..||
T Consensus 7 iVqrlW~al~AgD~D~l~adyaeDaV~i~P~sa~vl~GR~~~r~a~~~L~~~lP 60 (120)
T 3lyg_A 7 IVQRGWEALGAGDFDTLVTDYVEKMIFIMPGQADVLKGRQAFRSALDNLGEILP 60 (120)
T ss_dssp HHHHHHHHHHHTCHHHHGGGEEEEEEEECSSTTCEEESHHHHHHHHTTHHHHSC
T ss_pred HHHHHHHHHhcCCHHHHHHhcccCeEEEccCccceeecHHHHHHHHHHHHhhCC
Confidence 34555556654 568999999999999999 568999999999 556678
No 95
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=74.27 E-value=2.5 Score=28.50 Aligned_cols=48 Identities=8% Similarity=0.177 Sum_probs=39.9
Q ss_pred HHHHHHHhhcccc-ChhhhcccccCCceEEEc--CceecCHHHHHHHHhcC
Q 033171 10 KTFVGHYYHLFDN-DRASLSSLYQPTSMLTFE--GQKFFGVDDISTKFNQL 57 (125)
Q Consensus 10 ~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~--g~~~~G~~~I~~~l~~l 57 (125)
..+++.|+..+.+ +.+.|..+|.+++.+.=. ..++.|++++...|..+
T Consensus 21 ~~~v~~f~~A~~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~~ 71 (155)
T 3flj_A 21 HPTIARMQEVVAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHV 71 (155)
T ss_dssp CHHHHHHHHHHTTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 3578899998886 679999999999998743 56899999999988753
No 96
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=65.91 E-value=26 Score=23.08 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhhccccC-hhhhcccccCCceEEEc---C-----------ce---ecCHHHHHHHHhc---------C
Q 033171 5 TELVGKTFVGHYYHLFDND-RASLSSLYQPTSMLTFE---G-----------QK---FFGVDDISTKFNQ---------L 57 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~~-r~~L~~~Y~~~S~~t~~---g-----------~~---~~G~~~I~~~l~~---------l 57 (125)
...-.++|+..|-.++|.. -+....+|.+++.+... + .. ..|++.+.+.+.. .
T Consensus 11 ~~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~d~~~~~~~~~~~~~~l~~rv~~l~~~~~~~~~ 90 (172)
T 2b1x_B 11 TVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAED 90 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEEEECCCCTTSSCCEEEEEEEEEECHHHHHHHHHHHTSSCCGGGS
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHhccCCEEEEEEeecccccccccCCCcccEEEeCCHHHHHHHHHHHhcCcccccC
Confidence 4556789999999999975 57888999999876432 1 11 1377888774332 3
Q ss_pred CCCcceEEeEEeeeeecCCC-CcEEEEEEEEE-EEcCCC-Cceee-EE-EEEEeeCCCCcEEEEceeEEe
Q 033171 58 PFDQCRHMISTIDSQPCPST-GGLLIFVSGSL-QLAGED-HHLRF-SQ-MFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 58 p~~~~~~~i~s~D~q~~~~~-~~ilI~V~G~~-~~~~~~-~~~~F-~q-tF~L~~~~~~~y~I~nD~fr~ 122 (125)
|+..+.|.|..+-.... .+ +.+-+...-.+ ...... ...-| .. .-.|.+.+ ++|.|..=...+
T Consensus 91 p~~~t~H~i~n~~I~~~-~~~d~a~~~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~-g~Wri~~R~v~l 158 (172)
T 2b1x_B 91 PPSRSRHFVTNVRVATG-DSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAG-DSFLMAKRVVLL 158 (172)
T ss_dssp SCCEEEEEEEEEEEEEC-SSTTEEEEEEEEEEEEECTTCSCCEEEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred CCCeEEEEecCEEEEEe-cCCCEEEEEEEEEEEEEcCCCCceEEEEEEEEEEEEEcC-CEEEEEEEEEEE
Confidence 66689999998777665 32 33332222121 112221 11222 22 22455666 889998766654
No 97
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=64.68 E-value=27 Score=22.90 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhhccccC-hhhhcccccCCceEEEcC-------c-----eecCHHHHHHHHhc------CCCCcceEEe
Q 033171 6 ELVGKTFVGHYYHLFDND-RASLSSLYQPTSMLTFEG-------Q-----KFFGVDDISTKFNQ------LPFDQCRHMI 66 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~~-r~~L~~~Y~~~S~~t~~g-------~-----~~~G~~~I~~~l~~------lp~~~~~~~i 66 (125)
..-..+|+..|=.++|.. -+....+|.+++.+.... . ...|++.+.+.+.. .|...+.|.|
T Consensus 13 ~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~~p~~rt~H~v 92 (163)
T 3eby_A 13 QSAIDDFNAAYGLCLDDDRLEQWPTLFVDDCLYQVIARENVDNGLPAAVMYCDSKGMLADRVVALRKANVFPEHFNRHLI 92 (163)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGTGGGEEEEEEEEEEEGGGGGSSSCCEEEEESSHHHHHHHHHHHHHTC----CEEEEEE
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHhhcCCEEEEeeccccCCCCCCcEEEEcCCHHHHHHHHHHhhccCCCCCcceeEEE
Confidence 344578999999999975 488889999999875532 1 12477777665543 2445888998
Q ss_pred EEeeeeecCCCCcEEEEEEEEE-EEcCCCCceee--EE-EEEEeeCCCCcEEEEceeEE
Q 033171 67 STIDSQPCPSTGGLLIFVSGSL-QLAGEDHHLRF--SQ-MFHLIPTPRGSFAVQNDIFR 121 (125)
Q Consensus 67 ~s~D~q~~~~~~~ilI~V~G~~-~~~~~~~~~~F--~q-tF~L~~~~~~~y~I~nD~fr 121 (125)
+.+-.... .++.+-+...-.+ ....+.....| .. .-.|...+ ++|.|.+=...
T Consensus 93 sn~~i~~~-~~d~a~v~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~-~gwri~~R~v~ 149 (163)
T 3eby_A 93 GRAVITGV-EGDQVSAEASYVVFQTRNDGETRIYNAGKYVDRFDLSG-GTVRLKSRTCI 149 (163)
T ss_dssp CCCEEEEE-ETTEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECCT-TCCEEEEEEEE
T ss_pred cCEEEEec-CCCEEEEEEEEEEEEEcCCCccEEEEEEEEEEEEEEEC-CEEEEEEEEEE
Confidence 87665333 2333333222221 12221112222 22 33565665 88998765443
No 98
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=60.00 E-value=16 Score=24.74 Aligned_cols=49 Identities=6% Similarity=-0.000 Sum_probs=37.6
Q ss_pred HHHHHHHHHhhcccc-ChhhhcccccCCceEEEcCceecCHHHHHHHHhc
Q 033171 8 VGKTFVGHYYHLFDN-DRASLSSLYQPTSMLTFEGQKFFGVDDISTKFNQ 56 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~~t~~g~~~~G~~~I~~~l~~ 56 (125)
.|.+=|+.=-...++ +|+.+..-|.++|.-.-...-+.|+++|.++|..
T Consensus 18 tA~~KVr~AEDaWNsrdP~rValAYT~Ds~WRNR~eF~~GR~eI~~FLtr 67 (166)
T 2imj_A 18 SAIEKIRLAEDGWNSRDPERVSLAYTLDTQWRNRAEFAHNREEAKAFLTR 67 (166)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccChHHHhhccCCCCceeccccccCcHHHHHHHHHH
Confidence 344444444456664 7999999999999876667789999999999875
No 99
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=57.09 E-value=40 Score=22.39 Aligned_cols=113 Identities=8% Similarity=0.077 Sum_probs=66.1
Q ss_pred HHHHHHHHHhhccccCh-hhhcccccCCceEEEcCc---------e--------ecCHHHHHHH---------HhcCCCC
Q 033171 8 VGKTFVGHYYHLFDNDR-ASLSSLYQPTSMLTFEGQ---------K--------FFGVDDISTK---------FNQLPFD 60 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~~r-~~L~~~Y~~~S~~t~~g~---------~--------~~G~~~I~~~---------l~~lp~~ 60 (125)
-..+|+..|-.++|..+ +....+|.+++.+..... + ..++..+... +...|..
T Consensus 9 ~i~~~l~~~a~~lD~~~~~~w~~lf~~D~~Y~~p~~~~~~~~~~d~~~~~~~i~~~~~~~L~~RV~rl~~~~~~~~~p~~ 88 (164)
T 3e99_A 9 DIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSATVPDT 88 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECCCC-----------CEEEEESSHHHHHHHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHhccccHHHHHHhcCCCEEEEEeccccccccccCCCCcceEEEcCCHHHHHHHHHHHhCccccccCCCc
Confidence 34679999999999754 777889999988754321 0 2344444332 4556777
Q ss_pred cceEEeEEeeeeecCCCCcEEEEEEEEEE-EcCCCCceeeE-EEEEEeeCCCCcEEEEceeEEe
Q 033171 61 QCRHMISTIDSQPCPSTGGLLIFVSGSLQ-LAGEDHHLRFS-QMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 61 ~~~~~i~s~D~q~~~~~~~ilI~V~G~~~-~~~~~~~~~F~-qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
.+.|.|+.+-..+. .++.+-+.-.-.+. ...+....-+. ....|...+ ++|.|.+=...+
T Consensus 89 rtrH~vsnv~v~~~-~~~~~~v~s~~~v~~~r~~~~~~~~G~~~d~L~r~~-~~wri~~R~v~l 150 (164)
T 3e99_A 89 RTSHNIANVERESA-DGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSG-DAPKIVSKYVVL 150 (164)
T ss_dssp EEEEEEEEEEEEEE-ETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSS-SSCEEEEEEEEE
T ss_pred eEEEEEeCEEEEEe-CCCEEEEEEEEEEEEECCCCeEEEEEEEEEEEEEEC-CEEEEEEEEEEE
Confidence 89999998877655 33444333332222 11121122222 233666666 889887655443
No 100
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=50.16 E-value=52 Score=21.69 Aligned_cols=116 Identities=9% Similarity=0.014 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHhhccccC-hhhhc-ccccCCceEEEcCc-------------------eecCHHHHHHHHhc-------
Q 033171 5 TELVGKTFVGHYYHLFDND-RASLS-SLYQPTSMLTFEGQ-------------------KFFGVDDISTKFNQ------- 56 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~~-r~~L~-~~Y~~~S~~t~~g~-------------------~~~G~~~I~~~l~~------- 56 (125)
...-..+|+..|-.++|.. -+... .+|.+++.+..... ...|++.+...+..
T Consensus 12 ~~~~I~~~l~rya~~lD~~d~d~w~~~lfteD~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~~ 91 (174)
T 2gbw_B 12 VHYDIEAHYRAEVRMFQTGQYREWLQGMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQVW 91 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEEEEECCCCCCTTCCCCCCCTTSCEEEEECHHHHHHHHHHTTTSCCG
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHhhccCCEEEEeeccccccccccccCCCcccceeEcCCHHHHHHHHHHHhcCCcc
Confidence 4456788999999999975 47788 89999998754210 12466666665543
Q ss_pred --CCCCcceEEeEEeeeeecCCCCcEEEEEEEEEE-EcCCCCceeeE--EEEEEeeCCCCcEEEEceeEEe
Q 033171 57 --LPFDQCRHMISTIDSQPCPSTGGLLIFVSGSLQ-LAGEDHHLRFS--QMFHLIPTPRGSFAVQNDIFRL 122 (125)
Q Consensus 57 --lp~~~~~~~i~s~D~q~~~~~~~ilI~V~G~~~-~~~~~~~~~F~--qtF~L~~~~~~~y~I~nD~fr~ 122 (125)
-|...+.|.|+.+-.... .++.+-+...-.+. ...+....-|. -...|...+ ++|.|..=...+
T Consensus 92 ~~~p~~rt~H~isN~~i~~~-~~~~a~v~s~~~~~~~~~~~~~~~~~G~y~D~l~r~~-~~wri~~R~v~l 160 (174)
T 2gbw_B 92 MEDPPSKIRYFVSNVEAFEA-GNGELDVLSNILVYRNRRQTEVTVHTLGREDKLRRDG-NGFKVFRRKLIL 160 (174)
T ss_dssp GGSSCCEEEEEEEEEEEEEE-ETTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred ccCCCCceEEEecCEEEEEc-CCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEEcC-CEEEEEEEEEEE
Confidence 355678999998776553 22322222111111 11111112221 122455555 789988755543
No 101
>2ia7_A Tail lysozyme, putative; NP_952040.1, putative tail lysozyme, structural genomics, JO center for structural genomics, JCSG; 1.44A {Geobacter sulfurreducens} SCOP: d.373.1.1
Probab=45.99 E-value=55 Score=20.76 Aligned_cols=52 Identities=15% Similarity=0.282 Sum_probs=33.1
Q ss_pred HHHHHHHhc-CCCCcceEEeEEeeeeecC-CCCcEEEEEEEEEEEcCCCCceeeEEEEEE
Q 033171 48 DDISTKFNQ-LPFDQCRHMISTIDSQPCP-STGGLLIFVSGSLQLAGEDHHLRFSQMFHL 105 (125)
Q Consensus 48 ~~I~~~l~~-lp~~~~~~~i~s~D~q~~~-~~~~ilI~V~G~~~~~~~~~~~~F~qtF~L 105 (125)
.+|.+.|.. .| +. .+..++..+.. .++.+.+.|.+.+...+. +..++-.|.|
T Consensus 77 ~~i~~al~~~EP--Ri--~~~~V~v~~~~~~~~~l~i~I~~~~~~~~~--~~~l~~~~~l 130 (134)
T 2ia7_A 77 NEVKEALILWEP--RI--ELLSVTASPREAAEGRLLIDIEYRVRSTNT--RFNLVYPFYL 130 (134)
T ss_dssp HHHHHHHHHHCT--TE--EEEEEEEECTTGGGTEEEEEEEEEETTTTE--EEEEEEEEEC
T ss_pred HHHHHHHHHhCC--Ce--EEEEEEEeecCCCCCEEEEEEEEEEecCCC--EEEEEEEEEe
Confidence 566677765 46 44 56666665542 357899999998865443 4556555555
No 102
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=42.65 E-value=75 Score=21.34 Aligned_cols=117 Identities=12% Similarity=-0.003 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhhccccC-hhhhcccccCCceEEEcCc--------------------eecCHHHHHHHHh--------
Q 033171 5 TELVGKTFVGHYYHLFDND-RASLSSLYQPTSMLTFEGQ--------------------KFFGVDDISTKFN-------- 55 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~~-r~~L~~~Y~~~S~~t~~g~--------------------~~~G~~~I~~~l~-------- 55 (125)
...-..+|+..|=.++|.. -+....+|.+++.+..... -..+++.+...+.
T Consensus 22 ~~~eI~~~l~r~A~lLD~~d~d~w~~lfteD~~y~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Rv~rl~~~~~~ 101 (187)
T 1uli_B 22 LQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQEYSGAREYAHFDDNAQMMRGRLRKITSDVSW 101 (187)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTCTTCG
T ss_pred HHHHHHHHHHHHHHHhcCcCHHHHHHHcccCEEEEeeccccccccccccccCCccceeeecCCHHHHHHHHHHHhccccc
Confidence 3456788999999999975 4778889999998755321 1235555554333
Q ss_pred -cCCCCcceEEeEEeeeeecCCCCcEEEEEEEEEEE-cCCCCceee--EEEEEEeeCCCC--cEEEEceeEEe
Q 033171 56 -QLPFDQCRHMISTIDSQPCPSTGGLLIFVSGSLQL-AGEDHHLRF--SQMFHLIPTPRG--SFAVQNDIFRL 122 (125)
Q Consensus 56 -~lp~~~~~~~i~s~D~q~~~~~~~ilI~V~G~~~~-~~~~~~~~F--~qtF~L~~~~~~--~y~I~nD~fr~ 122 (125)
+-|...+.|.|+.+-......++.+-+...-.+.. ..+.....| .....|...+ + +|.|..=...+
T Consensus 102 a~~p~~rtrH~isNv~V~~~~~~d~a~vrs~~~~~~~r~~~~~~~~~g~r~D~l~r~~-~~~gwri~~R~v~l 173 (187)
T 1uli_B 102 SENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIFAGERKDILRRTG-SEAGFELAKRTILI 173 (187)
T ss_dssp GGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECS-STTCEEEEEEEEEE
T ss_pred ccCCCCceEEEecCEEEEEeCCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEECC-CccceEEEEEEEEE
Confidence 24666899999988776651134343332222211 111111222 2234566666 6 89998755543
No 103
>1pfs_A PF3 SSDBP, PF3 single-stranded DNA binding protein; viral, bacteriophage PF3; NMR {Pseudomonas phage PF3} SCOP: b.40.4.7
Probab=36.18 E-value=66 Score=18.87 Aligned_cols=29 Identities=14% Similarity=0.256 Sum_probs=19.2
Q ss_pred cEEEEEEEEEEEc--CCCCceeeEEEEEEee
Q 033171 79 GLLIFVSGSLQLA--GEDHHLRFSQMFHLIP 107 (125)
Q Consensus 79 ~ilI~V~G~~~~~--~~~~~~~F~qtF~L~~ 107 (125)
.|.|.++|.++.+ .+..+..|.|.|+=.+
T Consensus 2 ti~I~~T~~~RsGvsksg~pYtm~eaf~hL~ 32 (78)
T 1pfs_A 2 NIQITFTDSVRQGTSAKGNPYTFQEGFLHLE 32 (78)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEEEEEEECCT
T ss_pred eEEEEEeeeEEecccccCCceEeEeeeeeCC
Confidence 4778888888776 3444666777775444
No 104
>4giw_A RUN and SH3 domain-containing protein 1; NGF-TRKA signaling pathway, NF-KB pathway, signaling protein; 2.00A {Homo sapiens}
Probab=35.76 E-value=8.8 Score=26.62 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=34.4
Q ss_pred HHHHHHHhhccccChhhhcccccCCceEEE-cCceecCHHHHHH---HHhcCCCC
Q 033171 10 KTFVGHYYHLFDNDRASLSSLYQPTSMLTF-EGQKFFGVDDIST---KFNQLPFD 60 (125)
Q Consensus 10 ~~Fv~~YY~~l~~~r~~L~~~Y~~~S~~t~-~g~~~~G~~~I~~---~l~~lp~~ 60 (125)
+.-+..|...+-.+++-+.++|.+.|.|.- ++.--.+.+.|.. -|..+||.
T Consensus 130 ~~~L~~~l~~l~~~~~~l~~~Y~~~a~lr~s~~~~~~l~~~l~~~L~~L~~l~F~ 184 (198)
T 4giw_A 130 TKQLELWFSSLQEDAGLLSLMYMPTGFFSLARGGCPSLSTELLLLLQPLSVLTFH 184 (198)
T ss_dssp HTCHHHHHHHHHTCHHHHHHHBCTTSHHHHTSSBTTBHHHHHHHHHGGGGGSCCB
T ss_pred HCHHHHHHHHHHhChHHHHHHcCCchHhhcccccChHHHHhhhccccccccccee
Confidence 334567888898999999999999998842 1211234455444 56677775
No 105
>3ub1_A ORF13-like protein; NTF2-like, transport protein; HET: MSE; 1.80A {Clostridium perfringens}
Probab=32.75 E-value=1.4e+02 Score=21.58 Aligned_cols=31 Identities=3% Similarity=0.103 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhhcccc-ChhhhcccccCCce
Q 033171 6 ELVGKTFVGHYYHLFDN-DRASLSSLYQPTSM 36 (125)
Q Consensus 6 ~~i~~~Fv~~YY~~l~~-~r~~L~~~Y~~~S~ 36 (125)
.+-...|++.||.++.+ +..+|..+..+++.
T Consensus 154 ~~~i~~FL~tFFk~Y~sa~~~eL~yy~~~~~~ 185 (261)
T 3ub1_A 154 TKKITDSVSQFFKAYYEQNQTQIDYFLVDGAD 185 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHTTBCTTCC
T ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHhcCCCc
Confidence 45567999999999974 78888877767554
No 106
>3j20_S 30S ribosomal protein S17E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.01 E-value=37 Score=19.54 Aligned_cols=19 Identities=26% Similarity=0.468 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhhccccC
Q 033171 5 TELVGKTFVGHYYHLFDND 23 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~~ 23 (125)
...+|+..++.||..|..+
T Consensus 9 VKr~a~~liekY~~~~t~D 27 (67)
T 3j20_S 9 IKRVARELVNKYPNEFTTD 27 (67)
T ss_dssp HHHHHHHHHHHSGGGCCSC
T ss_pred HHHHHHHHHHHhhhhhccc
Confidence 4678999999999999865
No 107
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=23.98 E-value=1.7e+02 Score=19.68 Aligned_cols=117 Identities=15% Similarity=0.034 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhhccccCh-hhhcccccCCceEEEcCc--------------------eecCHHHHHHHHhc-------
Q 033171 5 TELVGKTFVGHYYHLFDNDR-ASLSSLYQPTSMLTFEGQ--------------------KFFGVDDISTKFNQ------- 56 (125)
Q Consensus 5 ~~~i~~~Fv~~YY~~l~~~r-~~L~~~Y~~~S~~t~~g~--------------------~~~G~~~I~~~l~~------- 56 (125)
...-..+|+..|-.++|..+ +....+|.+++.+..... -..++..+...+..
T Consensus 21 ~~~~i~~~l~~~a~llD~~~~~~w~~lft~D~~Y~~p~~~~~~~~d~~~~~~~~~~~~~~~d~r~~L~~RV~rl~t~~~~ 100 (186)
T 3gzx_B 21 LQHQVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRIRQKTSDLNW 100 (186)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTTCCG
T ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHhCCCCEEEEEecCCCccccccccccCccccceeeeCCHHHHHHHHHHHhccccc
Confidence 34556789999999999864 667789999987755321 11356666555433
Q ss_pred --CCCCcceEEeEEeeeeecCCCCcEEEEEEEEEE-EcCCCCceee-EE-EEEEee-CCCC-cEEEEceeEEe
Q 033171 57 --LPFDQCRHMISTIDSQPCPSTGGLLIFVSGSLQ-LAGEDHHLRF-SQ-MFHLIP-TPRG-SFAVQNDIFRL 122 (125)
Q Consensus 57 --lp~~~~~~~i~s~D~q~~~~~~~ilI~V~G~~~-~~~~~~~~~F-~q-tF~L~~-~~~~-~y~I~nD~fr~ 122 (125)
.|...+.|.|+.+...+...++.+-+.-.=.+. ...+....-| .. .-.|.. .+ + +|.|.+-...+
T Consensus 101 a~~P~~RtrH~vsNv~v~~~~~~~~~~vrs~~~v~~~r~~~~~~~~~G~y~D~L~r~~~-g~~wrI~~R~V~l 172 (186)
T 3gzx_B 101 AEDPPSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLRIADN-PLGFQIAKRTIIL 172 (186)
T ss_dssp GGSSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSS-TTSEEEEEEEEEE
T ss_pred ccCCCceEEEEEcCEEEEEecCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEEEEcCC-CceEEEEEEEEEE
Confidence 476788999999887664123334333222222 1111112222 33 346666 55 7 89998765543
No 108
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=23.33 E-value=5.4 Score=23.51 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=14.2
Q ss_pred HHHHHHHHHhhccccCh
Q 033171 8 VGKTFVGHYYHLFDNDR 24 (125)
Q Consensus 8 i~~~Fv~~YY~~l~~~r 24 (125)
+|..|++.||..+|...
T Consensus 62 LGd~Fl~~~y~vfD~~~ 78 (87)
T 1b5f_B 62 LGDVFMRPYHTVFDYGN 78 (87)
T ss_dssp ECHHHHTTEEEEEETTT
T ss_pred echHHhccEEEEEECCC
Confidence 67889999999998643
No 109
>3hlz_A Uncharacterized protein BT_1490; NP_810393.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.72 E-value=2.2e+02 Score=20.57 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=42.8
Q ss_pred CceecCHHHHHHHHhcCCCCcceEEeEEeeeeecC---CCCcEEEEEEEEEEEcCCCCceeeEEEEEEeeCC
Q 033171 41 GQKFFGVDDISTKFNQLPFDQCRHMISTIDSQPCP---STGGLLIFVSGSLQLAGEDHHLRFSQMFHLIPTP 109 (125)
Q Consensus 41 g~~~~G~~~I~~~l~~lp~~~~~~~i~s~D~q~~~---~~~~ilI~V~G~~~~~~~~~~~~F~qtF~L~~~~ 109 (125)
|+...|++.|.+-|..-+ +...++|.+.||--+- ...|.--+-+=-++-.+ ...|-.+|.+.+.+
T Consensus 51 ~~~~yg~~~~~~El~en~-sa~~vkvg~~~caYs~e~F~Eeg~~ytsH~WitG~~---~~afeCsFTv~kg~ 118 (269)
T 3hlz_A 51 GNASYGKDAIRQELKEND-SASLVKIGTWDCAYSKEMFQEEGTYYTSHLWITGTG---NIAFECSFTVPKGG 118 (269)
T ss_dssp CSTTHHHHHHHHHHHHCT-TCEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEET---TEEEEEEEEEETTC
T ss_pred CchhhHHHHHHHHHhcCC-CceEEEeccEeeeehHhhhhhcCeeEEEEEEEeccC---ceEEEEEEEecCCC
Confidence 567789999999998877 4666788889997762 12343333332222112 46899999886654
Done!