Query 033174
Match_columns 125
No_of_seqs 57 out of 59
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 17:39:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wig_A KIAA1808 protein; LIM d 92.4 0.086 2.9E-06 33.3 2.6 44 66-121 30-73 (73)
2 1v6g_A Actin binding LIM prote 70.8 1.4 4.7E-05 27.7 1.0 33 66-110 40-72 (81)
3 2iyb_E Testin, TESS, TES; LIM 62.8 2.7 9.4E-05 25.5 1.1 12 99-110 51-63 (65)
4 2ctu_A Zinc finger protein 483 62.3 3.4 0.00012 23.7 1.4 37 65-107 37-73 (73)
5 2l3k_A Rhombotin-2, linker, LI 61.6 5.2 0.00018 27.2 2.5 36 66-113 35-70 (123)
6 2d8x_A Protein pinch; LIM doma 59.7 4.1 0.00014 24.7 1.6 33 66-111 30-62 (70)
7 2cu8_A Cysteine-rich protein 2 59.4 5.2 0.00018 24.7 2.0 13 99-111 55-68 (76)
8 2epx_A Zinc finger protein 28 58.9 1.7 5.9E-05 23.3 -0.3 39 64-107 9-47 (47)
9 2el4_A Zinc finger protein 268 58.3 1.2 4.2E-05 23.9 -0.9 38 64-107 9-46 (46)
10 2ytg_A ZFP-95, zinc finger pro 57.0 1.8 6.1E-05 23.3 -0.4 38 64-107 9-46 (46)
11 2ep2_A Zinc finger protein 484 55.9 1.1 3.9E-05 24.1 -1.4 38 64-107 9-46 (46)
12 2ytn_A Zinc finger protein 347 55.6 1.5 5.2E-05 23.6 -0.9 38 64-107 9-46 (46)
13 2ene_A Zinc finger protein 347 55.1 1.6 5.4E-05 23.5 -0.9 38 64-107 9-46 (46)
14 2eml_A Zinc finger protein 28 54.9 1.5 5.2E-05 23.6 -0.9 38 64-107 9-46 (46)
15 2epz_A Zinc finger protein 28 54.2 2 6.7E-05 23.1 -0.6 38 64-107 9-46 (46)
16 2ytr_A Zinc finger protein 347 53.7 1.9 6.5E-05 23.1 -0.7 38 64-107 9-46 (46)
17 2emf_A Zinc finger protein 484 53.4 1.6 5.6E-05 23.6 -1.0 38 64-107 9-46 (46)
18 2eq0_A Zinc finger protein 347 52.0 1.7 5.7E-05 23.4 -1.1 38 64-107 9-46 (46)
19 2eoq_A Zinc finger protein 224 51.5 1.3 4.5E-05 23.9 -1.6 38 64-107 9-46 (46)
20 2em9_A Zinc finger protein 224 51.4 1.8 6E-05 23.2 -1.1 38 64-107 9-46 (46)
21 2em5_A ZFP-95, zinc finger pro 51.2 2.3 7.8E-05 22.9 -0.6 38 64-107 9-46 (46)
22 2eme_A Zinc finger protein 473 50.6 1.8 6.3E-05 23.2 -1.1 38 64-107 9-46 (46)
23 2adr_A ADR1; transcription reg 49.8 1.8 6.1E-05 24.4 -1.2 39 66-110 1-39 (60)
24 2eop_A Zinc finger protein 268 49.7 2.5 8.5E-05 22.6 -0.6 38 64-107 9-46 (46)
25 2dar_A PDZ and LIM domain prot 49.7 7.4 0.00025 24.9 1.6 33 66-111 50-82 (90)
26 2ema_A Zinc finger protein 347 49.7 1.7 5.9E-05 23.4 -1.3 38 64-107 9-46 (46)
27 2ysp_A Zinc finger protein 224 49.2 1.8 6.1E-05 23.3 -1.3 38 64-107 9-46 (46)
28 1x61_A Thyroid receptor intera 49.2 6.6 0.00023 23.8 1.2 34 66-112 32-65 (72)
29 2m0f_A Zinc finger and BTB dom 48.7 5.8 0.0002 18.4 0.8 10 100-109 1-10 (29)
30 2elz_A Zinc finger protein 224 48.7 1.5 5E-05 23.8 -1.7 38 64-107 9-46 (46)
31 2ytq_A Zinc finger protein 268 48.6 2.7 9.3E-05 22.6 -0.6 38 64-107 9-46 (46)
32 3mjh_B Early endosome antigen 48.6 1.1 3.7E-05 26.4 -2.4 22 67-88 5-26 (34)
33 2em7_A Zinc finger protein 224 48.5 2 7E-05 23.1 -1.1 38 64-107 9-46 (46)
34 2em0_A Zinc finger protein 224 47.8 2.3 7.8E-05 22.9 -1.0 38 64-107 9-46 (46)
35 2en8_A Zinc finger protein 224 47.5 2.4 8.4E-05 22.6 -0.9 38 64-107 9-46 (46)
36 2epw_A Zinc finger protein 268 47.2 1.9 6.6E-05 23.1 -1.3 38 64-107 9-46 (46)
37 3d00_A Tungsten formylmethanof 47.0 2.7 9.3E-05 32.0 -1.0 54 37-110 130-187 (191)
38 2epr_A POZ-, at HOOK-, and zin 46.5 3.5 0.00012 22.5 -0.3 41 62-108 7-47 (48)
39 2emk_A Zinc finger protein 28 46.4 1.3 4.5E-05 24.0 -2.1 38 64-107 9-46 (46)
40 2ep0_A Zinc finger protein 28 46.4 3.1 0.00011 22.3 -0.6 38 64-107 9-46 (46)
41 2xjy_A Rhombotin-2; oncoprotei 45.9 7.1 0.00024 26.3 1.1 13 99-111 114-126 (131)
42 1v87_A Deltex protein 2; ring- 45.5 1.7 6E-05 28.7 -2.0 54 68-121 26-102 (114)
43 1vd4_A Transcription initiatio 45.2 8.2 0.00028 22.5 1.2 37 64-110 11-48 (62)
44 1nyp_A Pinch protein; LIM doma 44.5 9 0.00031 22.8 1.3 31 67-110 31-61 (66)
45 2ely_A Zinc finger protein 224 44.5 2.8 9.5E-05 22.6 -1.0 38 64-107 9-46 (46)
46 2dlo_A Thyroid receptor-intera 44.3 8.9 0.0003 23.9 1.3 13 66-78 40-52 (81)
47 2yu8_A Zinc finger protein 347 43.9 2 6.9E-05 23.1 -1.6 38 64-107 9-46 (46)
48 2lvu_A Zinc finger and BTB dom 49.7 4.9 0.00017 18.7 0.0 21 66-86 1-21 (26)
49 1x6h_A Transcriptional repress 43.5 2.6 8.8E-05 25.1 -1.3 44 64-109 12-55 (86)
50 2ep3_A Zinc finger protein 484 43.0 3.1 0.00011 22.3 -0.9 38 64-107 9-46 (46)
51 1x6a_A LIMK-2, LIM domain kina 42.2 9 0.00031 23.8 1.1 35 66-111 40-74 (81)
52 1x4l_A Skeletal muscle LIM-pro 42.2 9.6 0.00033 23.1 1.2 32 66-110 34-65 (72)
53 2enc_A Zinc finger protein 224 42.1 1.8 6.1E-05 23.3 -2.0 38 64-107 9-46 (46)
54 2en1_A Zinc finger protein 224 42.1 2.8 9.7E-05 22.5 -1.2 38 64-107 9-46 (46)
55 2yt9_A Zinc finger-containing 42.0 3.3 0.00011 25.2 -1.0 21 66-86 34-54 (95)
56 2el6_A Zinc finger protein 268 41.5 2.5 8.6E-05 22.8 -1.5 38 64-107 9-46 (46)
57 2eoe_A Zinc finger protein 347 40.9 2.7 9.4E-05 22.4 -1.4 38 64-107 9-46 (46)
58 1x64_A Alpha-actinin-2 associa 40.9 6.7 0.00023 25.0 0.3 33 66-111 50-82 (89)
59 1iml_A CRIP, cysteine rich int 40.4 13 0.00044 22.8 1.6 35 66-113 26-61 (76)
60 2lvr_A Zinc finger and BTB dom 46.2 6 0.00021 18.6 0.0 22 66-87 2-23 (30)
61 2emy_A Zinc finger protein 268 39.7 1.9 6.4E-05 23.2 -2.2 38 64-107 9-46 (46)
62 1x4j_A Ring finger protein 38; 39.5 0.74 2.5E-05 28.5 -4.3 46 65-110 21-69 (75)
63 2dmd_A Zinc finger protein 64, 39.4 5.1 0.00018 24.3 -0.4 39 65-109 34-72 (96)
64 1rut_X Flinc4, fusion protein 39.1 12 0.00041 27.1 1.5 15 99-113 117-131 (188)
65 2yso_A ZFP-95, zinc finger pro 39.1 1.4 4.7E-05 23.8 -2.8 38 64-107 9-46 (46)
66 2ytj_A Zinc finger protein 484 39.0 2.5 8.6E-05 22.7 -1.7 38 64-107 9-46 (46)
67 2cur_A Skeletal muscle LIM-pro 38.9 11 0.00036 22.7 1.0 33 66-111 30-62 (69)
68 2egq_A FHL1 protein; LIM domai 37.9 11 0.00038 23.0 1.0 32 66-110 45-76 (77)
69 1dx8_A Rubredoxin; electron tr 37.6 20 0.00069 23.5 2.3 44 66-113 6-52 (70)
70 2ytk_A Zinc finger protein 347 37.2 2.1 7.2E-05 23.0 -2.2 38 64-107 9-46 (46)
71 2emm_A ZFP-95, zinc finger pro 36.9 2 7E-05 23.0 -2.3 38 64-107 9-46 (46)
72 2ct1_A Transcriptional repress 36.8 2.4 8.2E-05 25.3 -2.2 42 64-109 12-53 (77)
73 2em8_A Zinc finger protein 224 36.8 1.5 5.1E-05 23.7 -2.9 38 64-107 9-46 (46)
74 2lvt_A Zinc finger and BTB dom 42.8 7.4 0.00025 18.3 0.0 20 67-86 2-21 (29)
75 2eq4_A Zinc finger protein 224 36.5 2.8 9.5E-05 22.4 -1.8 38 64-107 9-46 (46)
76 2emp_A Zinc finger protein 347 36.0 1.5 5.2E-05 23.6 -3.0 38 64-107 9-46 (46)
77 2cuq_A Four and A half LIM dom 35.2 15 0.00051 22.6 1.3 33 66-111 40-72 (80)
78 2m0e_A Zinc finger and BTB dom 34.9 6.5 0.00022 18.1 -0.4 14 67-80 2-15 (29)
79 1x68_A FHL5 protein; four-and- 34.8 15 0.00052 22.5 1.3 32 66-110 34-65 (76)
80 1bbo_A Human enhancer-binding 34.6 3.1 0.00011 23.0 -1.8 37 67-109 1-37 (57)
81 2eov_A Zinc finger protein 484 34.0 2.9 0.0001 22.3 -2.0 38 64-107 9-46 (46)
82 2eoo_A ZFP-95, zinc finger pro 34.0 1.7 5.8E-05 23.5 -3.0 38 64-107 9-46 (46)
83 2cot_A Zinc finger protein 435 33.6 9.2 0.00032 22.6 0.1 41 63-109 14-54 (77)
84 3u5e_g 60S ribosomal protein L 33.2 15 0.0005 27.0 1.1 41 66-110 40-87 (121)
85 2qgp_A HNH endonuclease; Q39X4 33.1 18 0.00063 24.8 1.6 46 68-114 36-83 (112)
86 3uk3_C Zinc finger protein 217 32.7 2.1 7.1E-05 23.8 -2.8 39 65-109 2-40 (57)
87 2co8_A NEDD9 interacting prote 32.6 24 0.00081 22.2 1.9 11 99-109 63-73 (82)
88 1yk4_A Rubredoxin, RD; electro 32.4 21 0.0007 22.1 1.6 43 67-113 2-47 (52)
89 2ee8_A Protein ODD-skipped-rel 32.3 5.2 0.00018 24.8 -1.2 39 65-109 43-81 (106)
90 1e8j_A Rubredoxin; iron-sulfur 31.7 26 0.0009 21.6 2.0 44 66-113 2-48 (52)
91 3j21_V 50S ribosomal protein L 31.3 17 0.00059 23.9 1.2 24 64-87 1-25 (66)
92 2eps_A POZ-, at HOOK-, and zin 31.3 3.8 0.00013 23.1 -1.9 42 63-109 8-49 (54)
93 1a7i_A QCRP2 (LIM1); LIM domai 31.0 17 0.00058 22.5 1.1 14 99-112 53-66 (81)
94 2emx_A Zinc finger protein 268 31.0 1.9 6.5E-05 23.0 -3.1 38 64-107 7-44 (44)
95 2emh_A Zinc finger protein 484 31.0 1.6 5.6E-05 23.5 -3.4 38 64-107 9-46 (46)
96 2ehe_A Four and A half LIM dom 30.4 19 0.00066 22.2 1.2 32 66-110 42-73 (82)
97 1klr_A Zinc finger Y-chromosom 30.4 5.8 0.0002 18.5 -1.0 19 67-85 2-20 (30)
98 2d8z_A Four and A half LIM dom 30.2 19 0.00066 21.5 1.2 33 66-111 30-62 (70)
99 1iym_A EL5; ring-H2 finger, ub 29.4 23 0.00079 20.0 1.4 18 66-83 4-21 (55)
100 1rik_A E6APC1 peptide; E6-bind 29.3 5.7 0.00019 18.6 -1.2 18 67-84 2-19 (29)
101 1fv5_A First zinc finger of U- 29.1 3.5 0.00012 23.2 -2.3 24 64-87 5-28 (36)
102 2l0b_A E3 ubiquitin-protein li 28.6 3 0.0001 27.0 -3.0 44 66-109 39-85 (91)
103 2lce_A B-cell lymphoma 6 prote 28.5 4.9 0.00017 23.7 -1.8 43 61-109 11-53 (74)
104 1gnf_A Transcription factor GA 28.1 17 0.00059 22.2 0.6 15 96-110 20-34 (46)
105 2ytd_A Zinc finger protein 473 27.6 3.2 0.00011 22.2 -2.5 38 64-107 9-46 (46)
106 2rgt_A Fusion of LIM/homeobox 27.1 26 0.0009 24.8 1.6 16 98-113 113-128 (169)
107 2en6_A Zinc finger protein 268 27.0 3.2 0.00011 22.2 -2.6 38 64-107 9-46 (46)
108 2ytt_A Zinc finger protein 473 26.8 3.8 0.00013 22.0 -2.4 38 64-107 9-46 (46)
109 1kbe_A Kinase suppressor of RA 26.8 17 0.00057 22.2 0.4 11 98-109 25-35 (49)
110 2ytm_A Zinc finger protein 28 26.5 3.2 0.00011 22.4 -2.7 38 64-107 9-46 (46)
111 2epq_A POZ-, at HOOK-, and zin 26.5 21 0.00073 18.7 0.8 8 101-108 10-17 (45)
112 1x4k_A Skeletal muscle LIM-pro 26.5 20 0.00068 21.5 0.8 14 98-111 51-64 (72)
113 1x5w_A Zinc finger protein 64, 26.5 9.6 0.00033 22.1 -0.7 41 63-109 5-45 (70)
114 2l4z_A DNA endonuclease RBBP8, 26.4 23 0.00077 24.4 1.1 15 96-110 106-120 (123)
115 2wbt_A B-129; zinc finger; 2.7 26.3 4.3 0.00015 26.3 -2.5 37 65-109 72-108 (129)
116 2v3b_B Rubredoxin 2, rubredoxi 26.1 23 0.00078 22.2 1.0 43 67-113 3-48 (55)
117 2eon_A ZFP-95, zinc finger pro 25.7 12 0.0004 20.0 -0.4 24 64-87 9-32 (46)
118 2ect_A Ring finger protein 126 25.3 14 0.00049 22.5 -0.1 47 64-110 12-61 (78)
119 2kn9_A Rubredoxin; metalloprot 25.1 30 0.001 23.5 1.5 44 66-113 26-72 (81)
120 4rxn_A Rubredoxin; electron tr 25.1 36 0.0012 21.3 1.8 44 66-113 2-48 (54)
121 2m0d_A Zinc finger and BTB dom 25.0 26 0.00089 15.9 0.9 11 99-109 1-11 (30)
122 2pjy_C TGF-beta receptor type- 25.0 30 0.001 22.7 1.5 34 73-106 22-56 (79)
123 1llm_C Chimera of ZIF23-GCN4; 24.9 3.6 0.00012 25.1 -3.0 21 66-86 2-22 (88)
124 2d8y_A Eplin protein; LIM doma 24.6 32 0.0011 21.8 1.5 17 97-113 59-75 (91)
125 4gzn_C ZFP-57, zinc finger pro 24.2 3.6 0.00012 25.2 -3.1 38 66-109 3-40 (60)
126 3f6q_B LIM and senescent cell 24.0 24 0.00084 20.8 0.8 16 68-83 12-27 (72)
127 2kmk_A Zinc finger protein GFI 24.0 3.8 0.00013 24.0 -2.9 40 64-109 26-65 (82)
128 2eq2_A Zinc finger protein 347 23.8 10 0.00035 20.1 -0.9 24 64-87 9-32 (46)
129 1x62_A C-terminal LIM domain p 23.7 50 0.0017 20.3 2.3 16 63-78 11-26 (79)
130 2dj7_A Actin-binding LIM prote 23.6 33 0.0011 21.5 1.4 17 67-83 15-31 (80)
131 1paa_A Yeast transcription fac 23.3 8.6 0.00029 18.1 -1.2 20 67-86 2-21 (30)
132 1x3h_A Leupaxin; paxillin fami 22.8 33 0.0011 21.0 1.2 33 66-111 40-72 (80)
133 2ytp_A Zinc finger protein 484 22.5 11 0.00038 20.0 -0.9 24 64-87 9-32 (46)
134 1pvm_A Conserved hypothetical 22.3 22 0.00075 24.5 0.4 17 95-111 163-179 (184)
135 2ep4_A Ring finger protein 24; 22.1 49 0.0017 19.8 1.9 22 63-84 11-32 (74)
136 2kvh_A Zinc finger and BTB dom 22.0 33 0.0011 15.7 0.9 10 100-109 2-11 (27)
137 2drp_A Protein (tramtrack DNA- 21.8 5.3 0.00018 22.8 -2.5 42 64-109 7-48 (66)
138 2i13_A AART; DNA binding, zinc 21.6 18 0.00062 24.8 -0.1 23 65-87 19-41 (190)
139 1vq8_U 50S ribosomal protein L 21.5 27 0.00092 23.0 0.7 21 67-87 3-24 (66)
140 2dlq_A GLI-kruppel family memb 21.3 6.9 0.00024 24.6 -2.2 42 65-109 33-74 (124)
141 2lv2_A Insulinoma-associated p 21.0 12 0.00042 24.2 -1.1 43 62-110 23-65 (85)
142 3dfx_A Trans-acting T-cell-spe 20.9 25 0.00084 22.8 0.4 15 96-110 23-37 (63)
143 2eq3_A Zinc finger protein 347 20.9 11 0.00036 20.0 -1.2 24 64-87 9-32 (46)
144 2csh_A Zinc finger protein 297 20.8 19 0.00066 22.4 -0.1 39 65-109 35-73 (110)
145 2jtn_A LIM domain-binding prot 20.8 36 0.0012 24.3 1.3 15 69-83 121-135 (182)
146 1j2o_A FLIN2, fusion of rhombo 20.8 38 0.0013 22.5 1.3 13 66-78 29-41 (114)
147 1m3v_A FLIN4, fusion of the LI 20.7 53 0.0018 22.0 2.1 47 69-116 71-118 (122)
148 2ent_A Krueppel-like factor 15 20.7 14 0.00048 19.5 -0.7 38 64-107 9-48 (48)
149 2cup_A Skeletal muscle LIM-pro 20.4 39 0.0013 21.4 1.3 22 66-88 32-53 (101)
150 2em6_A Zinc finger protein 224 20.2 15 0.00053 19.4 -0.6 24 64-87 9-32 (46)
151 2cor_A Pinch protein; LIM doma 20.1 64 0.0022 20.0 2.2 12 99-110 59-70 (79)
No 1
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=92.36 E-value=0.086 Score=33.35 Aligned_cols=44 Identities=18% Similarity=0.340 Sum_probs=31.7
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhhhhccCCCCCC
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSG 121 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KKdAmEGKr~~~ 121 (125)
.-|.|++|+..|..++...++ +|...|..|..+.-+-+-.|+++
T Consensus 30 ~CF~C~~C~~~L~~~~~f~~~------------~~~~yC~~C~~~~~~~~~~r~~~ 73 (73)
T 1wig_A 30 SCALCVRCGQMFAEGEEMYLQ------------GSSIWHPACRQAARTEDSGPSSG 73 (73)
T ss_dssp TTSCCSSSCCCCCSSCCCEEE------------TTEEECTTHHHHTSSSSCCSCCC
T ss_pred CcCEeCCCCCCCCCCCeeEee------------CCEEEChHHChHhhcccccCCCC
Confidence 558999998888766544443 45678999998866766666654
No 2
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=70.84 E-value=1.4 Score=27.74 Aligned_cols=33 Identities=24% Similarity=0.771 Sum_probs=18.9
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
.=|.|++|+..|..++-..+++ ++++|..|.++
T Consensus 40 ~CF~C~~C~~~L~~~~~~~~~~------------~~~~C~~C~~~ 72 (81)
T 1v6g_A 40 DCFVCAVCRLPFPPGDRVTFNG------------KECMCQKCSLP 72 (81)
T ss_dssp TTSSCSSSCCCCCSSSCEEEET------------TEEEEHHHHSC
T ss_pred cCCccccCCCCCCCCCEEEeCC------------CCEEChhhhcc
Confidence 3466777766665543222221 25678888866
No 3
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=62.75 E-value=2.7 Score=25.47 Aligned_cols=12 Identities=25% Similarity=1.110 Sum_probs=6.7
Q ss_pred CCceec-ccchhh
Q 033174 99 QGPFLC-ADCRNK 110 (125)
Q Consensus 99 ~GPFLC-~sCq~K 110 (125)
+|...| .+|..|
T Consensus 51 ~g~~yC~~~C~~k 63 (65)
T 2iyb_E 51 EGMVFCSVECKKR 63 (65)
T ss_dssp TTEEESSHHHHHT
T ss_pred CCEEecCHHHhhh
Confidence 455556 666554
No 4
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.28 E-value=3.4 Score=23.70 Aligned_cols=37 Identities=11% Similarity=0.134 Sum_probs=19.0
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
-++|.|.+|.........+..|... -.-+.||.|..|
T Consensus 37 ~~~~~C~~C~~~f~~~~~l~~H~~~------H~~~~~~~C~~C 73 (73)
T 2ctu_A 37 RKTPMCEKCRKDSCQEAALNKDEGN------ESGKKTSGPSSG 73 (73)
T ss_dssp SSSCCCHHHHHTCSCCCSSCCCSSC------CCCCCCSSCCCC
T ss_pred CCCCCCCCCChhhcCHHHHHHHHHh------hcCCCCCCCCCC
Confidence 3556666666555555444444321 122345666655
No 5
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=61.59 E-value=5.2 Score=27.24 Aligned_cols=36 Identities=17% Similarity=0.351 Sum_probs=24.3
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
.=|.|++|+..|..++...+ .+|...|..|-.++-+
T Consensus 35 ~CF~C~~C~~~L~~g~~f~~------------~~g~~yC~~cy~~~~~ 70 (123)
T 2l3k_A 35 ECFKCAACQKHFSVGDRYLL------------INSDIVCEQDIYEWTK 70 (123)
T ss_dssp TTCBCTTTCCBCCTTCEEEE------------CSSSEEEGGGHHHHHH
T ss_pred ccCccccCCCCCCCCCcEEe------------eCCEEEcHHHhHHHhc
Confidence 45788888777766553333 3466779999877655
No 6
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=59.71 E-value=4.1 Score=24.70 Aligned_cols=33 Identities=36% Similarity=0.718 Sum_probs=21.9
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.-|+|++|+..|..+ . + ...+|...|..|-.+.
T Consensus 30 ~CF~C~~C~~~L~~~-~-------f-----~~~~g~~yC~~c~~~~ 62 (70)
T 2d8x_A 30 ECFRCDLCQEVLADI-G-------F-----VKNAGRHLCRPCHNRE 62 (70)
T ss_dssp TTSBCSSSCCBCSSS-C-------C-----EEETTEEECHHHHHHH
T ss_pred cCCEeCCCCCcCCCC-c-------c-----EeECCeEECHHHhhhh
Confidence 457888887776543 1 2 1246788899998774
No 7
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=59.41 E-value=5.2 Score=24.69 Aligned_cols=13 Identities=23% Similarity=0.577 Sum_probs=8.8
Q ss_pred CCceecc-cchhhh
Q 033174 99 QGPFLCA-DCRNKK 111 (125)
Q Consensus 99 ~GPFLC~-sCq~KK 111 (125)
+|...|. .|-.++
T Consensus 55 ~g~~yC~~~cy~~~ 68 (76)
T 2cu8_A 55 DGKPFCHKPCYATL 68 (76)
T ss_dssp TTEEECTTTHHHHH
T ss_pred CCEEecchHHHHHh
Confidence 5677787 677653
No 8
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.87 E-value=1.7 Score=23.28 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=25.9
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.... -.-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~~-----H~~~k~~~C~~C 47 (47)
T 2epx_A 9 GKKPYECIECGKAFIQNTSLIRHWRYY-----HTGEKPSGPSSG 47 (47)
T ss_dssp CCCSBCCSSSCCCBSSHHHHHHHHTTT-----TTTSCSSSCCCC
T ss_pred CCCCEECCccCchhCChHHHHHHhHhh-----cCCCCCCCCCCC
Confidence 457899999987777666676665311 122347888877
No 9
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=58.33 E-value=1.2 Score=23.88 Aligned_cols=38 Identities=18% Similarity=0.203 Sum_probs=25.3
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2el4_A 9 GVKPYGCSQCAKTFSLKSQLIVHQRS--HT----GVKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHGGG--SS----SCCCSCCTTC
T ss_pred CCCceECCCCCchhCCHHHHHHHHHH--hC----CCCCCCCCCC
Confidence 45789999997777766666666522 11 2347888877
No 10
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.97 E-value=1.8 Score=23.30 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=25.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. . .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 46 (46)
T 2ytg_A 9 GEKPFKCGECGKSYNQRVHLTQHQRV--H----TGEKPSGPSSG 46 (46)
T ss_dssp SCCSEECTTTCCEESSSHHHHTTGGG--G----SSCCSSCSCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHH--c----CCCCCCCCCCC
Confidence 45789999998777766666666421 1 12457888877
No 11
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.93 E-value=1.1 Score=24.12 Aligned_cols=38 Identities=16% Similarity=0.277 Sum_probs=24.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|--. .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~c 46 (46)
T 2ep2_A 9 GEKPYECSICGKSFTKKSQLHVHQQI--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHT--TS----SCCSCCSCCC
T ss_pred CCcCcCCCCCCcccCCHHHHHHHHHH--hC----CCCCCCCCCC
Confidence 45789999997777666666666421 11 1347888877
No 12
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.59 E-value=1.5 Score=23.61 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=25.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2ytn_A 9 GKKPYKCNECGKVFTQNSHLARHRGI--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHGGG--TS----CCCCCSCCCC
T ss_pred CCcCeECCCCCCeeCCHHHHHHHhhh--cC----CCCCCCCCCC
Confidence 45789999997776666666666422 11 2457888877
No 13
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.14 E-value=1.6 Score=23.52 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=25.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... -.-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~------H~~~k~~~C~~C 46 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHNSYLSRHQRI------HTGEKPSGPSSG 46 (46)
T ss_dssp CSSSEECSSSCCEESSHHHHHHHHTT------TCCCCCCSCCCC
T ss_pred CCCCeECCCCCchhCChHHHHHHHhh------cCCCCCCCCCCC
Confidence 45789999997777666666666532 122457888877
No 14
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.86 E-value=1.5 Score=23.59 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=25.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQSLSVHQRI--H----SGKKPSGPSSG 46 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHGG--G----SSCCCSCSSCC
T ss_pred CCCCeeCCCcCCccCCHHHHHHHHHH--h----cCCCCCCCCCC
Confidence 45789999997777666666666422 1 12347888877
No 15
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.18 E-value=2 Score=23.13 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=25.1
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... -.-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~------H~~~k~~~C~~C 46 (46)
T 2epz_A 9 GEKPFDCIDCGKAFSDHIGLNQHRRI------HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSBCCTTTCCCBSSHHHHHHHHTT------TTTCCCCSSCCC
T ss_pred CCCCeECCCCCceeCCHHHHHHHHHH------hCCCCCCCCCCC
Confidence 45789999997776666666666432 122457888877
No 16
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.67 E-value=1.9 Score=23.10 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=25.3
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2ytr_A 9 GEKPYKCNECGKAFSQTSKLARHQRI--HT----GEKPSGPSSG 46 (46)
T ss_dssp SCCTTCCTTTCCCCSSHHHHHHHHTT--TT----TCSCCCSCCC
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHHh--cC----CCCCCCCCCC
Confidence 45789999997777666666666532 11 2347888877
No 17
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.44 E-value=1.6 Score=23.57 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=25.2
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. -.-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~------H~~~k~~~C~~c 46 (46)
T 2emf_A 9 GGKHFECTECGKAFTRKSTLSMHQKI------HTGEKPSGPSSG 46 (46)
T ss_dssp SSCCEECSSSCCEESCHHHHHHHGGG------TSCSSCSCCCCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHH------hCCCCCCCCCCC
Confidence 45789999997776666666666422 112457888877
No 18
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.01 E-value=1.7 Score=23.42 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=25.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H----~~~k~~~C~~c 46 (46)
T 2eq0_A 9 GEKPYKCHECGKVFRRNSHLARHQLI--H----TGEKPSGPSSG 46 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHTT--T----CCCCCSCCSCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHH--c----CCCCCCCCCCC
Confidence 45789999997777666666666422 1 12457888877
No 19
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.49 E-value=1.3 Score=23.85 Aligned_cols=38 Identities=13% Similarity=0.212 Sum_probs=24.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 46 (46)
T 2eoq_A 9 GEKPFKCDICGKSFCGRSRLNRHSMV--H----TAEKPSGPSSG 46 (46)
T ss_dssp SSCSCCCSSSCCCCSSHHHHHHHHHH--T----TCCCSSSCCCC
T ss_pred CCCCcCCCcCCchhCCHHHHHHHHHH--c----CCCCCCCCCCC
Confidence 45689999997776666666666421 1 12357888877
No 20
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=51.35 E-value=1.8 Score=23.24 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=24.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2em9_A 9 GEKPYNCKECGKSFRWASCLLKHQRV--HS----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHGGG--GT----SCCCCSTTCC
T ss_pred CCcCeECCccccccCChHHHHHHHHH--hC----CCCCCCCCCC
Confidence 45789999997776666666666422 11 2347888877
No 21
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.19 E-value=2.3 Score=22.94 Aligned_cols=38 Identities=13% Similarity=0.133 Sum_probs=24.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|...- . -+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H--~----~~~~~~C~~C 46 (46)
T 2em5_A 9 STKSHQCHECGRGFTLKSHLNQHQRIH--T----GEKPSGPSSG 46 (46)
T ss_dssp CSCSEECSSSCCEESSHHHHHHHHTTT--S----CSCCSSCCCC
T ss_pred CCCCeECCcCCCccCCHHHHHHHHHHh--C----CCCCCCCCCC
Confidence 356899999977776666666665321 1 2346888776
No 22
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.64 E-value=1.8 Score=23.16 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=24.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2eme_A 9 GEKPYVCDYCGKAFGLSAELVRHQRI--H----TGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHGG--G----CCCSCCSSCCC
T ss_pred CCCCeECCCCChhhCCHHHHHHHHHh--c----CCCCCCCCCCC
Confidence 34789999997777666666666421 1 12347888877
No 23
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=49.80 E-value=1.8 Score=24.44 Aligned_cols=39 Identities=28% Similarity=0.551 Sum_probs=25.9
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
++|.|.+|.........+..|...- .-+-||.|..|...
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h------~~~~~~~C~~C~~~ 39 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRSH------TNEKPYPCGLCNRA 39 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHTT------TSSCSEECTTTCCE
T ss_pred CcCcCCCCccccCCHHHHHHHHHHh------CCCCCccCCCCCCc
Confidence 4688999977776666666665321 12358999999653
No 24
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.74 E-value=2.5 Score=22.61 Aligned_cols=38 Identities=13% Similarity=0.134 Sum_probs=24.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 46 (46)
T 2eop_A 9 GEKPHECRECGKSFSFNSQLIVHQRI--H----TGENPSGPSSG 46 (46)
T ss_dssp CCCSCBCTTTCCBCSSHHHHHHHHTT--T----TTSCCSCCCCC
T ss_pred CCCCeeCCCCCchhCCHHHHHHHHHH--c----CCCCCCCCCCC
Confidence 45689999997776666666666422 1 12357888877
No 25
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.67 E-value=7.4 Score=24.86 Aligned_cols=33 Identities=30% Similarity=0.571 Sum_probs=20.0
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.=|.|++|...|... ... ..+|...|..|-.++
T Consensus 50 ~CF~C~~C~~~L~~~-~f~------------~~~g~~yC~~cy~~~ 82 (90)
T 2dar_A 50 EEFNCAHCKNTMAYI-GFV------------EEKGALYCELCYEKF 82 (90)
T ss_dssp TTCBCSSSCCBCSSS-CBE------------ESSSCEECHHHHHHH
T ss_pred cCCccCCCCCCCCCC-EeE------------eECCEEECHHHHHHH
Confidence 457777777766522 111 235677788887663
No 26
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=49.66 E-value=1.7 Score=23.36 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=24.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~c 46 (46)
T 2ema_A 9 GEKRYKCNECGKVFSRNSQLSQHQKI--H----TGEKPSGPSSG 46 (46)
T ss_dssp TSCCEECSSSCCEESSHHHHHHHHTG--G----GCCCCCSSSCC
T ss_pred CCcCcCCCCCcchhCCHHHHHHHHHh--c----CCCCCCCCCCC
Confidence 35789999997766666566666422 1 12347888877
No 27
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.21 E-value=1.8 Score=23.31 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=25.1
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. -.-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~------H~~~~~~~C~~C 46 (46)
T 2ysp_A 9 GEKPYKCEKCGKGYNSKFNLDMHQKV------HTGERPSGPSSG 46 (46)
T ss_dssp SCCSEEETTTTEEESCHHHHHHHHTT------SCSCCSSCCSCC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHHh------hCCCCCCCCCCC
Confidence 45789999997777666666666422 112457888877
No 28
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.20 E-value=6.6 Score=23.79 Aligned_cols=34 Identities=21% Similarity=0.499 Sum_probs=22.5
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKD 112 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KKd 112 (125)
.=|.|++|+..|. ++...+ .+|...|..|-.+.-
T Consensus 32 ~CF~C~~C~~~L~-~~~~~~------------~~~~~yC~~cy~~~~ 65 (72)
T 1x61_A 32 GCFVCSTCRAQLR-GQHFYA------------VERRAYCEGCYVATL 65 (72)
T ss_dssp TTCBCSSSCCBCT-TSCEEE------------SSSCEEEHHHHHHHH
T ss_pred cCCcccccCCcCC-cCcCEe------------eCCeEECHHHHHHHH
Confidence 3588999988883 332222 257788999987643
No 29
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=48.75 E-value=5.8 Score=18.40 Aligned_cols=10 Identities=40% Similarity=1.298 Sum_probs=8.2
Q ss_pred Cceecccchh
Q 033174 100 GPFLCADCRN 109 (125)
Q Consensus 100 GPFLC~sCq~ 109 (125)
|||.|..|..
T Consensus 1 ~~~~C~~C~k 10 (29)
T 2m0f_A 1 GPLKCRECGK 10 (29)
T ss_dssp CCEECTTTSC
T ss_pred CCccCCCCCC
Confidence 6899999964
No 30
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.74 E-value=1.5 Score=23.76 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=25.1
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRRLNLDMHQRV--H----MGEKTSGPSSG 46 (46)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHGGG--G----GSCCCCCSCCC
T ss_pred CCCCeeCcccCchhCCHHHHHHHHHh--c----CCCCCCCCCCC
Confidence 45789999997777666666666431 1 12457888877
No 31
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.57 E-value=2.7 Score=22.62 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=25.3
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2ytq_A 9 GEKPYGCSECGKAFSSKSYLIIHMRT--HS----GEKPSGPSSG 46 (46)
T ss_dssp CCCSCBCSSSCCBCSCHHHHHHHHTT--TC----CSCSSCCCCC
T ss_pred CCCCcCCCccChhhCChHHHHHHHHH--hC----CCCCCCCCCC
Confidence 45789999997777666666666532 11 1357888876
No 32
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=48.56 E-value=1.1 Score=26.35 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=18.4
Q ss_pred cccceeeecccCCCCceeeecC
Q 033174 67 LFTCAVCQIDLAPSEGISVHAG 88 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh~g 88 (125)
-|.|.+|-+++...+.+.+|-.
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHH
T ss_pred ccCCcHHHHHcCCHHHHHHHHH
Confidence 3899999999998888887753
No 33
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.50 E-value=2 Score=23.05 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=24.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... +. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2em7_A 9 GEKPYKCEECGKGFICRRDLYTHHMV--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHGGG--GT----TCCCSSTTCC
T ss_pred CCcCccCCCccchhCCHHHHHHHHHH--hC----CCCCCCCCCC
Confidence 45789999997776666666666421 11 1347888776
No 34
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=47.80 E-value=2.3 Score=22.85 Aligned_cols=38 Identities=11% Similarity=0.237 Sum_probs=24.2
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2em0_A 9 GEKTWKCRECDMCFSQASSLRLHQNV--H----VGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCCSSSCCCCSSHHHHHHHGGG--G----SSSSCSCSSCC
T ss_pred CCcCeECCCCCcccCCHHHHHHHHHH--c----CCCCCcCCCCC
Confidence 45789999997766666566666422 1 12347888776
No 35
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.52 E-value=2.4 Score=22.63 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=24.7
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. . .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 46 (46)
T 2en8_A 9 GEKSHTCDECGKNFCYISALRIHQRV--H----MGEKCSGPSSG 46 (46)
T ss_dssp CCSSEECTTTCCEESSHHHHHHHHTT--T----CCSCSSCCSCC
T ss_pred CCCCeECCCcCcccCCHHHHHHHHHH--h----CCCCCCCCCCC
Confidence 45689999997776666666666421 1 12457888877
No 36
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.17 E-value=1.9 Score=23.07 Aligned_cols=38 Identities=8% Similarity=0.017 Sum_probs=24.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2epw_A 9 GEKPCKCTECGKAFCWKSQLIMHQRT--HV----DDKHSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSSHHHHHHHHH--CC----SCCCSCCCCC
T ss_pred CCCCeeCCCCCCccCCHHHHHHHHHH--hC----CCCCCCCCCC
Confidence 34689999997777666666666421 11 1347888877
No 37
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=47.00 E-value=2.7 Score=31.98 Aligned_cols=54 Identities=19% Similarity=0.432 Sum_probs=32.2
Q ss_pred CchhhhhccCchhhH-hHhcCC---CcccccCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 37 GIVEELFEEGSAMLA-ERLGNE---ENVVQSTSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 37 ~vVEElFEEGSAmLs-eRL~~~---yp~~~~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
..|++|.+.+--+++ ++.... .| -...+..-.|++| ||.+..+ |-.+|.+|+.+
T Consensus 130 ~~~~~il~~~~elf~v~~v~~~~~~~p-~~~~~~~~~C~~C------GE~~~~~-------------g~~~C~~C~~~ 187 (191)
T 3d00_A 130 RLFKEIREAGPDILELRNVKLKPGFLE-KKHKGKIVLCPQC------REAYPAQ-------------DGELCLSCQGG 187 (191)
T ss_dssp HHHHHHHHHGGGGEEEEEEECCGGGGC-CCCCCCEEECTTT------CCEEEGG-------------GCSSCHHHHTT
T ss_pred HHHHHHhCCchheEEEEEeccccccCC-CcCCcCCEECCcC------CCChhhC-------------CCcCCccccCC
Confidence 445566653322222 223444 44 4456788889999 4544444 77899999865
No 38
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=46.51 E-value=3.5 Score=22.54 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=27.8
Q ss_pred ccCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccch
Q 033174 62 QSTSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCR 108 (125)
Q Consensus 62 ~~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq 108 (125)
...-++|.|.+|.........+..|...- . -+-||.|..|-
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~----~~k~~~C~~C~ 47 (48)
T 2epr_A 7 GRTRKQVACEICGKIFRDVYHLNRHKLSH--S----GEKPYSSGPSS 47 (48)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGGS--C----SCCCCCSCCCC
T ss_pred CCCCcCeeCCCCCcccCCHHHHHHHHHhc--C----CCCCccCCCCC
Confidence 34567899999987777666677775321 1 13478898884
No 39
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=46.44 E-value=1.3 Score=23.97 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=24.1
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2emk_A 9 GEKPYECKECGKAFSQTTHLIQHQRV--HT----GEKPSGPSSG 46 (46)
T ss_dssp SSCSCBCSSSCCBCSCHHHHHHHHHH--HS----SCCCSSCCCC
T ss_pred CCCceECCCCCchhCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 35679999997776666556555421 11 1347888877
No 40
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.42 E-value=3.1 Score=22.30 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=25.1
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. + .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 46 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRYGSSLTVHQRI--H----TGEKPSGPSSG 46 (46)
T ss_dssp TCCSEECSSSCCEESSHHHHHHHHTT--T----SSSCCCSCCCC
T ss_pred CCCCeeCcccCcccCChHHHHHHHHH--h----CCCCCCCCCCC
Confidence 45789999997777666666666422 1 12347888776
No 41
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=45.86 E-value=7.1 Score=26.26 Aligned_cols=13 Identities=8% Similarity=0.164 Sum_probs=7.6
Q ss_pred CCceecccchhhh
Q 033174 99 QGPFLCADCRNKK 111 (125)
Q Consensus 99 ~GPFLC~sCq~KK 111 (125)
+|-.+|..|-.+.
T Consensus 114 ~~~~~C~~c~~~~ 126 (131)
T 2xjy_A 114 NSDIVCEQDIYEW 126 (131)
T ss_dssp TTEEEEGGGHHHH
T ss_pred CCEEEcHHHHHHH
Confidence 4555676666553
No 42
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=45.49 E-value=1.7 Score=28.69 Aligned_cols=54 Identities=24% Similarity=0.500 Sum_probs=31.4
Q ss_pred ccceeeecccCCCCcee---------------ee-cCCCCCCC-CCCC------CCceecccchhhhhhccCCCCCC
Q 033174 68 FTCAVCQIDLAPSEGIS---------------VH-AGSIFSTS-SKPW------QGPFLCADCRNKKDAMEGKRPSG 121 (125)
Q Consensus 68 f~CAvCqvdl~~~egIS---------------vh-~gs~~~~~-~~pW------~GPFLC~sCq~KKdAmEGKr~~~ 121 (125)
..|+||+.++....+.. +- =|..|+.. +..| .+...|.-|+..-..+.|..+.+
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~g~qp~g 102 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPWG 102 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSSSCTTS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCCCCCCCC
Confidence 48999999986554211 11 14444322 2556 46778888887655566655443
No 43
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=45.18 E-value=8.2 Score=22.52 Aligned_cols=37 Identities=24% Similarity=0.550 Sum_probs=21.8
Q ss_pred CCCcccceeeecccCCCCc-eeeecCCCCCCCCCCCCCceecccchhh
Q 033174 64 TSGLFTCAVCQIDLAPSEG-ISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~eg-ISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
.-++|.|.+|......... .-+|.| +.||.|..|...
T Consensus 11 ~~k~~~C~~C~k~F~~~~~l~~~H~~----------~k~~~C~~C~k~ 48 (62)
T 1vd4_A 11 NRASFKCPVCSSTFTDLEANQLFDPM----------TGTFRCTFCHTE 48 (62)
T ss_dssp SSSEEECSSSCCEEEHHHHHHHEETT----------TTEEBCSSSCCB
T ss_pred CCCCccCCCCCchhccHHHhHhhcCC----------CCCEECCCCCCc
Confidence 4578999999653211110 134433 468999999753
No 44
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=44.50 E-value=9 Score=22.83 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=16.5
Q ss_pred cccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 67 LFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
=|.|++|+..|.. +... ..+|...|..|-.+
T Consensus 31 CF~C~~C~~~L~~-~~~~------------~~~g~~yC~~~y~~ 61 (66)
T 1nyp_A 31 HFVCAKCEKPFLG-HRHY------------ERKGLAYCETHYNQ 61 (66)
T ss_dssp TCBCTTTCCBCSS-SCCE------------EETTEEECHHHHHH
T ss_pred cCEECCCCCCCCC-CceE------------eECCcEECHHHHHH
Confidence 4667777666642 1111 23566667666544
No 45
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=44.47 E-value=2.8 Score=22.57 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=25.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... ... +-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~----~k~~~C~~C 46 (46)
T 2ely_A 9 GEKPFKCVECGKGFSRRSALNVHHKL--HTG----EKPSGPSSG 46 (46)
T ss_dssp CCCSBCCSSSCCCBSSTTHHHHHHHH--HSC----CSSCSCCCC
T ss_pred CCCCcccCccCcccCCHHHHHHHHHH--cCC----CCCCCCCCC
Confidence 45789999998777777666666421 111 346888776
No 46
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.31 E-value=8.9 Score=23.86 Aligned_cols=13 Identities=54% Similarity=1.119 Sum_probs=7.8
Q ss_pred CcccceeeecccC
Q 033174 66 GLFTCAVCQIDLA 78 (125)
Q Consensus 66 ~lf~CAvCqvdl~ 78 (125)
.=|.|++|+..|.
T Consensus 40 ~CF~C~~C~~~L~ 52 (81)
T 2dlo_A 40 GCFTCVVCHRGLD 52 (81)
T ss_dssp TTCBCSSSCCBCT
T ss_pred HhcCcccCCCccC
Confidence 3466777766654
No 47
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.93 E-value=2 Score=23.07 Aligned_cols=38 Identities=13% Similarity=0.144 Sum_probs=24.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2yu8_A 9 GEKPYKCNECGKVFTQNSHLARHRRV--HT----GGKPSGPSSG 46 (46)
T ss_dssp CCSSEECSSSCCEESSSHHHHHHTHH--HH----SCCCSCSCCC
T ss_pred CCCCeECCcCCchhCCHHHHHHHHHh--cC----CCCCCCCCCC
Confidence 45789999998777766666666421 11 1347888776
No 48
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=49.70 E-value=4.9 Score=18.69 Aligned_cols=21 Identities=19% Similarity=0.482 Sum_probs=11.8
Q ss_pred CcccceeeecccCCCCceeee
Q 033174 66 GLFTCAVCQIDLAPSEGISVH 86 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh 86 (125)
++|.|.+|.........+..|
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H 21 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANH 21 (26)
Confidence 357777776555444444444
No 49
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=43.48 E-value=2.6 Score=25.12 Aligned_cols=44 Identities=14% Similarity=0.428 Sum_probs=27.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
.-++|.|.+|.........+..|.-...... .-+.||.|..|..
T Consensus 12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~--~~~~~~~C~~C~~ 55 (86)
T 1x6h_A 12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPN--FVPAAFVCSKCGK 55 (86)
T ss_dssp CCCCEECSSSSCEESSHHHHHHHHHHTTCSS--CCCCCEECSSSCC
T ss_pred CCCCCcCCCCCCccCCHHHHHHHHHHhcCCc--CCCcceECCCCCC
Confidence 4578999999777766666666642211111 1124799999864
No 50
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.02 E-value=3.1 Score=22.30 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=24.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~~ 46 (46)
T 2ep3_A 9 GEKPYRCAECGKAFTDRSNLFTHQKI--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHTT--TT----TSCCCCTTCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 35689999997776666666666422 11 2347888765
No 51
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.22 E-value=9 Score=23.77 Aligned_cols=35 Identities=17% Similarity=0.596 Sum_probs=23.6
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.=|.|++|+..|..++...+ ..+|..+|..|..+.
T Consensus 40 ~CF~C~~C~~~L~~g~~f~~-----------~~~~~~~C~~c~~~~ 74 (81)
T 1x6a_A 40 ECFACMSCKVIIEDGDAYAL-----------VQHATLYCGKCHNEV 74 (81)
T ss_dssp TSCBCTTTCCBCCTTSCEEE-----------CSSSCEEEHHHHHHH
T ss_pred ccCCccCCCCccCCCCcEEE-----------eeCCEEECHHHHHHH
Confidence 46788899888876654331 125667799888764
No 52
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.20 E-value=9.6 Score=23.11 Aligned_cols=32 Identities=28% Similarity=0.738 Sum_probs=21.3
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
.-|+|+.|+..|. ++...+ .+|-..|..|-.+
T Consensus 34 ~CF~C~~C~~~L~-~~~f~~------------~~g~~yC~~c~~~ 65 (72)
T 1x4l_A 34 DCFNCKKCSLSLV-GRGFLT------------ERDDILCPDCGKD 65 (72)
T ss_dssp TTCBCSSSCCBCT-TSCCEE------------CSSSEECHHHHHT
T ss_pred ccCEeccCCCcCC-CCccEe------------ECCEEEChhHcCc
Confidence 4588999988775 332222 3566779888765
No 53
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.05 E-value=1.8 Score=23.30 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=24.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... + .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNSQCYSHQRS--H----SGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHH--S----CCSSCCSSCCC
T ss_pred CCCCcCCCCCCCcCCChHHHHHHHHH--h----CCCCCCCCCCC
Confidence 45689999997777666666666421 1 12457888776
No 54
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.05 E-value=2.8 Score=22.46 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=24.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||-|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2en1_A 9 GEKPFKCEECGKRFTQNSQLHSHQRV--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGGG--GS----CCCCSCCCCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 34679999997776666666666422 11 1357888877
No 55
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.96 E-value=3.3 Score=25.19 Aligned_cols=21 Identities=24% Similarity=0.691 Sum_probs=10.0
Q ss_pred CcccceeeecccCCCCceeee
Q 033174 66 GLFTCAVCQIDLAPSEGISVH 86 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh 86 (125)
++|.|.+|.........+..|
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H 54 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYH 54 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHH
Confidence 445555555444444444443
No 56
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=41.55 E-value=2.5 Score=22.76 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=24.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. +. .+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLLVHQRM--HT----REKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHGG--GC----CSSCCSCCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 45689999997776666666666422 11 2457888776
No 57
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.92 E-value=2.7 Score=22.43 Aligned_cols=38 Identities=13% Similarity=0.134 Sum_probs=24.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2eoe_A 9 GEKPYKCNECGKVFTQNSHLANHQRI--HT----GVKPSGPSSG 46 (46)
T ss_dssp CCCSSEETTTTEECSSHHHHHHHHGG--GS----CCCSCSSCCC
T ss_pred CCCCeECCCcChhhCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 35678999997776666666666421 11 2346888776
No 58
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=40.88 E-value=6.7 Score=25.04 Aligned_cols=33 Identities=24% Similarity=0.593 Sum_probs=20.1
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.=|.|++|+..|..+ .++ ..+|.+.|..|-.++
T Consensus 50 ~CF~C~~C~~~L~~~--------~~~-----~~~g~~yC~~~y~~~ 82 (89)
T 1x64_A 50 ECFVCADCNLNLKQK--------GYF-----FVEGELYCETHARAR 82 (89)
T ss_dssp TTCCCSSSCCCTTTS--------CCE-----EETTEEECHHHHHHH
T ss_pred cCCEecCCCCCCCCC--------CeE-----eECCEEECHHHHHHH
Confidence 457777777766533 122 236777888887653
No 59
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=40.36 E-value=13 Score=22.82 Aligned_cols=35 Identities=20% Similarity=0.426 Sum_probs=22.6
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecc-cchhhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCA-DCRNKKDA 113 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~-sCq~KKdA 113 (125)
.=|.|++|+..|..+ ...+ .+|...|. .|-.++-+
T Consensus 26 ~CF~C~~C~~~L~~~-~~~~------------~~g~~yC~~~cy~~~f~ 61 (76)
T 1iml_A 26 PCLKCEKCGKTLTSG-GHAE------------HEGKPYCNHPCYSAMFG 61 (76)
T ss_dssp TTCBCTTTCCBCCTT-TEEE------------ETTEEEETTTHHHHHSS
T ss_pred CCCCccccCccCCCC-ceEC------------cCCeEeeCHHHHHHHhC
Confidence 457888888777654 2222 36777788 58776444
No 60
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=46.17 E-value=6 Score=18.57 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=13.4
Q ss_pred CcccceeeecccCCCCceeeec
Q 033174 66 GLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~ 87 (125)
++|.|.+|.........+..|.
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~ 23 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQRHV 23 (30)
Confidence 4678888866655554555553
No 61
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.67 E-value=1.9 Score=23.23 Aligned_cols=38 Identities=11% Similarity=0.159 Sum_probs=23.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQLISHQRT--HA----GEKPSGPSSG 46 (46)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHH--HT----TSCCSCSSCC
T ss_pred CCcCcCCCCCCcccCcHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 45789999997766666566655421 11 1347888776
No 62
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.51 E-value=0.74 Score=28.52 Aligned_cols=46 Identities=24% Similarity=0.504 Sum_probs=24.8
Q ss_pred CCcccceeeecccCCCCceeeec-CCCCCCCC-CCC-CCceecccchhh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHA-GSIFSTSS-KPW-QGPFLCADCRNK 110 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~-gs~~~~~~-~pW-~GPFLC~sCq~K 110 (125)
.....|+||+.++..++.+.+=. |..|+... ..| .....|.-|+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~ 69 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 69 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCc
Confidence 45568999999887776543322 44443221 333 112356666544
No 63
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=39.42 E-value=5.1 Score=24.33 Aligned_cols=39 Identities=23% Similarity=0.482 Sum_probs=20.7
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
-++|.|.+|.........+..|-.. ..-+.||.|..|..
T Consensus 34 ~~~~~C~~C~~~f~~~~~l~~H~~~------h~~~~~~~C~~C~~ 72 (96)
T 2dmd_A 34 VKPYKCKTCDYAAADSSSLNKHLRI------HSDERPFKCQICPY 72 (96)
T ss_dssp CCSEECSSSCCEESSHHHHHHHHHH------SCCCCCEECSSSSC
T ss_pred CCCEeCCCCCCccCCHHHHHHHHHH------hCCCCCccCCCCCC
Confidence 3567777776555544444444321 11234677777754
No 64
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=39.15 E-value=12 Score=27.12 Aligned_cols=15 Identities=20% Similarity=0.425 Sum_probs=10.1
Q ss_pred CCceecccchhhhhh
Q 033174 99 QGPFLCADCRNKKDA 113 (125)
Q Consensus 99 ~GPFLC~sCq~KKdA 113 (125)
+|..+|..|-.+.-+
T Consensus 117 ~g~~yC~~c~~~~~~ 131 (188)
T 1rut_X 117 NGSLFCEHDRPTALI 131 (188)
T ss_dssp TTEEEEGGGCCTTTC
T ss_pred CCeEECHHHHHHHhc
Confidence 566778888766433
No 65
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.11 E-value=1.4 Score=23.77 Aligned_cols=38 Identities=11% Similarity=-0.081 Sum_probs=22.9
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2yso_A 9 REKSHQCRECGEIFFQYVSLIEHQVL--HM----GQKNSGPSSG 46 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHH--HS----CCSCCCTTCC
T ss_pred CCCCEEccccChhhCCHHHHHHHHHH--hC----CCCCCCCCCC
Confidence 34678899887766665555555321 11 1346888776
No 66
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.00 E-value=2.5 Score=22.68 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=23.9
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~c 46 (46)
T 2ytj_A 9 GEKPYICAECGKAFTIRSNLIKHQKI--HT----KQKPSGPSSG 46 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHHH--TS----CCCCSSCSCC
T ss_pred CCcCeECCCCChhhCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 34678999997776666666666421 11 1347888766
No 67
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.86 E-value=11 Score=22.72 Aligned_cols=33 Identities=24% Similarity=0.665 Sum_probs=22.0
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.-|.|++|+..|. ++...+ .+|-..|..|-.+.
T Consensus 30 ~CF~C~~C~~~L~-~~~~~~------------~~~~~yC~~cy~~~ 62 (69)
T 2cur_A 30 DCFVCVTCSKKLA-GQRFTA------------VEDQYYCVDCYKNF 62 (69)
T ss_dssp TTTBCTTTCCBCT-TSCEEE------------CSSCEEEHHHHHHH
T ss_pred CcCEECCCCCCCC-CCccEe------------ECCEEECHHHhHHH
Confidence 4688999988876 322222 35667898887664
No 68
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=37.94 E-value=11 Score=23.05 Aligned_cols=32 Identities=31% Similarity=0.617 Sum_probs=19.0
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
.=|+|++|+..|. ++. .-..+|...|..|-.+
T Consensus 45 ~CF~C~~C~~~L~-~~~------------f~~~~~~~yC~~cy~~ 76 (77)
T 2egq_A 45 YCFHCKKCSVNLA-NKR------------FVFHQEQVYCPDCAKK 76 (77)
T ss_dssp TTCBCSSSCCBCT-TSC------------CCEETTEECCHHHHHH
T ss_pred ccCEehhcCCCCC-CCc------------cEeECCEEEChHHhcc
Confidence 3467777776664 211 1245677778877654
No 69
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=37.61 E-value=20 Score=23.47 Aligned_cols=44 Identities=30% Similarity=0.715 Sum_probs=31.3
Q ss_pred CcccceeeecccCCCCceeeec---CCCCCCCCCCCCCceecccchhhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHA---GSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~---gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
..++|.||.-.-.+.+|...++ |..|..-... |.|..|...|+.
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPdd----w~CP~Cga~K~~ 52 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDS----FMCPACRSPKNQ 52 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTT----CBCTTTCCBGGG
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCC----CcCCCCCCCHHH
Confidence 4689999988888888766554 4444333334 479999998887
No 70
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.17 E-value=2.1 Score=22.99 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=23.3
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~~~~~C~~c 46 (46)
T 2ytk_A 9 GEKPYKCNECGKVFTQNSHLTNHWRI--H----TGEKPSGPSSG 46 (46)
T ss_dssp SSCSEECSSSCCEESSHHHHHHHHHH--H----SSSSCSSCCCC
T ss_pred CCCCEeCCcCCCccCCHHHHHHHHHH--H----CCCCCCCCCCC
Confidence 35678899987766665555555421 1 12347888776
No 71
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.87 E-value=2 Score=22.97 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=23.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . ..+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 46 (46)
T 2emm_A 9 GERPHKCNECGKSFIQSAHLIQHQRI--H----TGEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHH--H----SCCCTTSSSCC
T ss_pred CCCCeeCCCCChhhCCHHHHHHHHHH--h----CCCCCCCCCCC
Confidence 34678999997766666556555421 1 12347888776
No 72
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.84 E-value=2.4 Score=25.27 Aligned_cols=42 Identities=17% Similarity=0.478 Sum_probs=27.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
.-++|.|.+|.........+..|.-...... +-||.|..|..
T Consensus 12 ~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~----~~~~~C~~C~~ 53 (77)
T 2ct1_A 12 GEKPYECYICHARFTQSGTMKMHILQKHTEN----VAKFHCPHCDT 53 (77)
T ss_dssp CCCSEECTTTCCEESCHHHHHHHHHHHSSSS----CSSEECSSSSC
T ss_pred CCCCeECCCcCchhCCHHHHHHHHHHhcCCC----CCccCCCCCCC
Confidence 4578999999877776666666642111110 24899999975
No 73
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.82 E-value=1.5 Score=23.72 Aligned_cols=38 Identities=11% Similarity=0.072 Sum_probs=23.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... +. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2em8_A 9 GEKPYKCVECGKGYKRRLDLDFHQRV--HT----GEKLSGPSSG 46 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHHH--HH----CCCCCCSCCC
T ss_pred CCCCeECcccCchhCCHHHHHHHHHH--Hc----CCCCCCCCCC
Confidence 44678898887766665556555421 11 1346778766
No 74
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=42.85 E-value=7.4 Score=18.34 Aligned_cols=20 Identities=15% Similarity=0.491 Sum_probs=11.8
Q ss_pred cccceeeecccCCCCceeee
Q 033174 67 LFTCAVCQIDLAPSEGISVH 86 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh 86 (125)
+|.|.+|.........+..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAH 21 (29)
Confidence 57777776555444444444
No 75
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.46 E-value=2.8 Score=22.41 Aligned_cols=38 Identities=13% Similarity=0.196 Sum_probs=23.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2eq4_A 9 GEKLYNCKECGKSFSRAPCLLKHERL--H----SGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCBTTTTBCCSCHHHHHHHHHH--C----CSSSCCCCCCC
T ss_pred CCCCeECCCCCCccCchHHHHHHHHh--c----CCCCCCCCCCC
Confidence 45678999997766665555555421 1 12357888776
No 76
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.99 E-value=1.5 Score=23.59 Aligned_cols=38 Identities=13% Similarity=0.153 Sum_probs=22.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2emp_A 9 GVKPYMCNECGKAFSVYSSLTTHQVI--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHHHH--HH----CCSCCSCCCC
T ss_pred CCcCeECCCCCchhCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 34678898887766665555555311 11 1346778766
No 77
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.24 E-value=15 Score=22.59 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=21.4
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.=|.|++|+..|. ++...+ .+|-..|..|-.++
T Consensus 40 ~CF~C~~C~~~L~-~~~~~~------------~~~~~yC~~cy~~~ 72 (80)
T 2cuq_A 40 ECLVCTGCQTPLA-GQQFTS------------RDEDPYCVACFGEL 72 (80)
T ss_dssp TTCBCSSSCCBCT-TCCEEE------------CSSSEEEHHHHHHH
T ss_pred hhCCcccCCCcCC-CCeeEe------------ECCEEECHHHHHHH
Confidence 4578888988884 323332 35667788887663
No 78
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=34.86 E-value=6.5 Score=18.11 Aligned_cols=14 Identities=14% Similarity=0.437 Sum_probs=7.7
Q ss_pred cccceeeecccCCC
Q 033174 67 LFTCAVCQIDLAPS 80 (125)
Q Consensus 67 lf~CAvCqvdl~~~ 80 (125)
+|.|.+|.......
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 2 EHKCPHCDKKFNQV 15 (29)
T ss_dssp CCCCSSCCCCCCTT
T ss_pred CCcCCCCCcccCCH
Confidence 56677775444333
No 79
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.82 E-value=15 Score=22.55 Aligned_cols=32 Identities=22% Similarity=0.662 Sum_probs=21.7
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
.-|+|++|+..|. ++...+ .+|...|..|-.+
T Consensus 34 ~CF~C~~C~~~L~-~~~f~~------------~~g~~yC~~cy~~ 65 (76)
T 1x68_A 34 ECFNCGKCSVSLV-GKGFLT------------QNKEIFCQKCGSG 65 (76)
T ss_dssp GGCBCTTTCCBCS-SSCEEE------------ETTEEEETTTTCC
T ss_pred ccCChhhCCCcCC-CCceEe------------ECCEEECHHHhhh
Confidence 4689999988886 333333 3566778888765
No 80
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=34.62 E-value=3.1 Score=23.03 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=22.8
Q ss_pred cccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 67 LFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
+|.|.+|.........+..|...- .-+-||-|..|..
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h------~~~~~~~C~~C~~ 37 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTH------TDVRPYHCTYCNF 37 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHT------SSCCCEECSSSSC
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhc------CCCCCccCCCCCc
Confidence 477888876666555565554211 1145788888864
No 81
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.97 E-value=2.9 Score=22.32 Aligned_cols=38 Identities=8% Similarity=0.105 Sum_probs=23.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... . .-+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H----~~~~~~~C~~C 46 (46)
T 2eov_A 9 GEKPYKCSDCGKSFTWKSRLRIHQKC--H----TGERHSGPSSG 46 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHHHHHHHHH--H----SCCSSCCSCCC
T ss_pred CCCCccCCccChhhCCHHHHHHHHHh--c----CCCCCCCCCCC
Confidence 34678999997766666566555421 1 12357888776
No 82
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.97 E-value=1.7 Score=23.49 Aligned_cols=38 Identities=8% Similarity=0.080 Sum_probs=23.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2eoo_A 9 GERPYGCNECGKNFGRHSHLIEHLKR--HF----REKSSGPSSG 46 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHH--HH----STTSSCCSCC
T ss_pred CCCCEEccccCcccCCHHHHHHHHHH--Hc----CCCCCCCCCC
Confidence 34678898887766666566555421 11 1346777766
No 83
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.65 E-value=9.2 Score=22.59 Aligned_cols=41 Identities=20% Similarity=0.541 Sum_probs=27.6
Q ss_pred cCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 63 STSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 63 ~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
..-++|.|.+|.........+..|.-. -.-+-||.|..|..
T Consensus 14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~------h~~~~~~~C~~C~~ 54 (77)
T 2cot_A 14 RERRRYKCDECGKSFSHSSDLSKHRRT------HTGEKPYKCDECGK 54 (77)
T ss_dssp CCSCSSBCSSSCCBCSCHHHHHHHHTT------TCCSCSEECSSSCC
T ss_pred CCCCCEECCCCCcccCCHHHHHHHHHH------cCCCcCeeCCCCCC
Confidence 345789999997777666666666532 11245799999865
No 84
>3u5e_g 60S ribosomal protein L34-A, 60S ribosomal protein L33-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_g 4b6a_g 3izc_i 3izs_i
Probab=33.21 E-value=15 Score=26.95 Aligned_cols=41 Identities=29% Similarity=0.499 Sum_probs=25.4
Q ss_pred CcccceeeecccCCCCceee---ec--CCCC--CCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISV---HA--GSIF--STSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISv---h~--gs~~--~~~~~pW~GPFLC~sCq~K 110 (125)
....|++|-..| .||.- ++ .... -...++.+| +||+.|-..
T Consensus 40 ~~pkCg~Cg~~L---~GI~~~RP~e~~rlsK~~KtvsRaYGG-~lC~~CVr~ 87 (121)
T 3u5e_g 40 TRPKCGDCGSAL---QGISTLRPRQYATVSKTHKTVSRAYGG-SRCANCVKE 87 (121)
T ss_dssp CCCBCTTTCCBC---TTCCCCCGGGGGSSCGGGSCCSSTTTT-TSCSHHHHH
T ss_pred CCCCCCCCCCcc---CCccCCcHHHHHhcccCCCCcccCCcc-cchHHHHHH
Confidence 344799998776 35442 11 2222 355688877 799999654
No 85
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=33.05 E-value=18 Score=24.79 Aligned_cols=46 Identities=17% Similarity=0.316 Sum_probs=29.8
Q ss_pred ccceeeecccCCCCceeeec-CCC-CCCCCCCCCCceecccchhhhhhc
Q 033174 68 FTCAVCQIDLAPSEGISVHA-GSI-FSTSSKPWQGPFLCADCRNKKDAM 114 (125)
Q Consensus 68 f~CAvCqvdl~~~egISvh~-gs~-~~~~~~pW~GPFLC~sCq~KKdAm 114 (125)
..|+.|...+.+. .+.|+= =+. ..+....++-=.+|..|..+|-+.
T Consensus 36 ~~C~yCg~~~~~~-~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~K~~~ 83 (112)
T 2qgp_A 36 GICHYCGEIFPPE-ELTMDHLVPVVRGGKSTRGNVVPACKECNNRKKYL 83 (112)
T ss_dssp TBCTTTCCBCCGG-GEEEEESSCTTTTCCCSTTTEEEEEHHHHHHHHTC
T ss_pred CcCCCCCCcCCCC-CcEEEEEeehhcCCCCChhhChhhCHHHHHHHccC
Confidence 4899998777543 344432 211 134456677789999999887764
No 86
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=32.68 E-value=2.1 Score=23.81 Aligned_cols=39 Identities=18% Similarity=0.395 Sum_probs=23.6
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
.++|.|.+|.........+..|... -..+-||.|..|..
T Consensus 2 ~~~~~C~~C~~~f~~~~~l~~H~~~------h~~~~~~~C~~C~~ 40 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNYYLNIHLRT------HTGEKPYKCEFCEY 40 (57)
T ss_dssp ---CBCTTTCCBCSCHHHHHHHHHH------HHCCCCEECSSSSC
T ss_pred CCCccCCCCcchhCChHHHHHHHHH------cCCCCCcCCCCCcc
Confidence 3678999997766666555555421 11245799999964
No 87
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.58 E-value=24 Score=22.24 Aligned_cols=11 Identities=27% Similarity=0.613 Sum_probs=5.5
Q ss_pred CCceecccchh
Q 033174 99 QGPFLCADCRN 109 (125)
Q Consensus 99 ~GPFLC~sCq~ 109 (125)
+|-+.|..|-.
T Consensus 63 ~g~~yC~~~y~ 73 (82)
T 2co8_A 63 DGHFYCLQHLP 73 (82)
T ss_dssp TCCCEETTTCC
T ss_pred CCEEEChHHHH
Confidence 45555555543
No 88
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=32.36 E-value=21 Score=22.12 Aligned_cols=43 Identities=23% Similarity=0.584 Sum_probs=29.9
Q ss_pred cccceeeecccCCCCceeeec---CCCCCCCCCCCCCceecccchhhhhh
Q 033174 67 LFTCAVCQIDLAPSEGISVHA---GSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh~---gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
.++|.||.-.-.+..|-..++ |..|..-...| .|..|...|+.
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw----~CP~Cg~~K~~ 47 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDW----VCPLCGAPKSE 47 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTC----BCTTTCCBGGG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCC----cCCCCCCCHHH
Confidence 478999988778887776655 44443333444 79999887775
No 89
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=32.33 E-value=5.2 Score=24.83 Aligned_cols=39 Identities=21% Similarity=0.567 Sum_probs=24.7
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
-.+|.|.+|.........+..|-.. ..-+-||.|..|..
T Consensus 43 ~~~~~C~~C~~~f~~~~~l~~H~~~------h~~~~~~~C~~C~~ 81 (106)
T 2ee8_A 43 ERPYTCDICHKAFRRQDHLRDHRYI------HSKEKPFKCQECGK 81 (106)
T ss_dssp SCCCBCSSSCCBCSCHHHHHHHGGG------SCCCCTTSCSSSCC
T ss_pred CCCcCCCCccchhCCHHHHHHHHHH------hCCCCCeECCCcCC
Confidence 3568888887766665556666421 12345788888864
No 90
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=31.74 E-value=26 Score=21.62 Aligned_cols=44 Identities=27% Similarity=0.678 Sum_probs=29.2
Q ss_pred CcccceeeecccCCCCceeeec---CCCCCCCCCCCCCceecccchhhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHA---GSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~---gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
+.++|-||.-.-.+.+|-..++ |..|..-... |.|..|...|+.
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~d----w~CP~Cg~~K~~ 48 (52)
T 1e8j_A 2 DIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDD----WACPVCGASKDA 48 (52)
T ss_dssp CCEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTT----CCCSSSCCCTTS
T ss_pred CcEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCC----CcCCCCCCcHHH
Confidence 3589999988878777765544 4444333333 479999887664
No 91
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.35 E-value=17 Score=23.88 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=18.7
Q ss_pred CCCcccceeeecccCCCCce-eeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGI-SVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egI-Svh~ 87 (125)
|-..-.|+.|.-+|.||.|+ -|..
T Consensus 1 M~~~~~C~Fcg~~IyPG~G~~~Vr~ 25 (66)
T 3j21_V 1 MARWNVCSYCGKPFEPGTGKMYVRN 25 (66)
T ss_dssp CCCCCBCTTTCSBCCTTCCEEEECS
T ss_pred CCceeEecCcCCcccCCCCeEEEec
Confidence 44567899999999999994 4444
No 92
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=31.30 E-value=3.8 Score=23.10 Aligned_cols=42 Identities=14% Similarity=0.350 Sum_probs=27.3
Q ss_pred cCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 63 STSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 63 ~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
..-++|.|.+|.........+..|.-.. ..-+-||.|..|.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~-----H~~~k~~~C~~C~k 49 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLNGHIKQV-----HTSERPHKCQVWVS 49 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHHHHHHHT-----SCCCCCCCSSSSCC
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHHHh-----cCCCCCccCCCCCC
Confidence 3457899999977776666666664211 12245789998864
No 93
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=31.03 E-value=17 Score=22.50 Aligned_cols=14 Identities=29% Similarity=0.627 Sum_probs=9.3
Q ss_pred CCceecccchhhhh
Q 033174 99 QGPFLCADCRNKKD 112 (125)
Q Consensus 99 ~GPFLC~sCq~KKd 112 (125)
+|...|..|-.++-
T Consensus 53 ~~~~yC~~cy~~~f 66 (81)
T 1a7i_A 53 DAEVYCKSCYGKKY 66 (81)
T ss_dssp TTEEECSHHHHHHC
T ss_pred CCEEECHHHHHHHh
Confidence 66677777776643
No 94
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.02 E-value=1.9 Score=22.95 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=23.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-. .. -+.||.|..|
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 44 (44)
T 2emx_A 7 GEKPFGCSCCEKAFSSKSYLLVHQQT--HA----EEKPSGPSSG 44 (44)
T ss_dssp SCCCEECSSSSCEESSHHHHHHHHHH--HT----SSCSCSCCCC
T ss_pred CCcCccCCCCCcccCCHHHHHHHHHH--hC----CCCCCCCCCC
Confidence 34678999997766666666665421 11 2356888776
No 95
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.96 E-value=1.6 Score=23.48 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=22.0
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~--H~----~~k~~~C~~c 46 (46)
T 2emh_A 9 GERPYICTVCGKAFTDRSNLIKHQKI--HT----GEKPSGPSSG 46 (46)
T ss_dssp CCCSEECTTTCCEESSHHHHHHHHHH--HH----CSSCSSSCCC
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHHh--cC----CCCCCCCCCC
Confidence 34678888887666655555555321 11 1346777766
No 96
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.44 E-value=19 Score=22.21 Aligned_cols=32 Identities=38% Similarity=0.767 Sum_probs=20.7
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
.=|.|++|+..|. ++...+ .+|..+|..|-.+
T Consensus 42 ~CF~C~~C~~~L~-~~~f~~------------~~~~~~C~~c~~~ 73 (82)
T 2ehe_A 42 GCFRCCRCQRSLA-DEPFTC------------QDSELLCNDCYCS 73 (82)
T ss_dssp TTSBCTTTCCBCS-SCCEEE------------ETTEEEETTTSSC
T ss_pred cCCeecCCCCccC-CCccEe------------eCCEEECHHHHhh
Confidence 4578888888775 222323 3566778888765
No 97
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=30.36 E-value=5.8 Score=18.46 Aligned_cols=19 Identities=21% Similarity=0.583 Sum_probs=9.9
Q ss_pred cccceeeecccCCCCceee
Q 033174 67 LFTCAVCQIDLAPSEGISV 85 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISv 85 (125)
+|.|.+|.........+..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~ 20 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKT 20 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHH
T ss_pred CccCCCCCCccCCHHHHHH
Confidence 5667777554444333333
No 98
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.21 E-value=19 Score=21.49 Aligned_cols=33 Identities=18% Similarity=0.440 Sum_probs=21.9
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.-|.|++|+..|.. + .+. ..+|...|..|-.+.
T Consensus 30 ~CF~C~~C~~~L~~-~-------~~~-----~~~~~~yC~~cy~~~ 62 (70)
T 2d8z_A 30 ECFVCTACRKQLSG-Q-------RFT-----ARDDFAYCLNCFCDL 62 (70)
T ss_dssp TTSBCSSSCCBCTT-S-------CCE-----ESSSSEECHHHHHHH
T ss_pred CCCccCCCCCcCCc-C-------ceE-----eeCCeEECHHHHHHH
Confidence 45789999877742 1 221 347788899988764
No 99
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=29.40 E-value=23 Score=19.97 Aligned_cols=18 Identities=33% Similarity=0.565 Sum_probs=13.9
Q ss_pred CcccceeeecccCCCCce
Q 033174 66 GLFTCAVCQIDLAPSEGI 83 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egI 83 (125)
.-..|+||..+++.++.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~ 21 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEA 21 (55)
T ss_dssp CSCCCTTTCCCCCTTSCC
T ss_pred CCCcCccCCccccCCCce
Confidence 456899999998877653
No 100
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=29.31 E-value=5.7 Score=18.60 Aligned_cols=18 Identities=22% Similarity=0.602 Sum_probs=9.2
Q ss_pred cccceeeecccCCCCcee
Q 033174 67 LFTCAVCQIDLAPSEGIS 84 (125)
Q Consensus 67 lf~CAvCqvdl~~~egIS 84 (125)
+|.|.+|.........+.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLT 19 (29)
T ss_dssp CEECSSSSCEESCSHHHH
T ss_pred CccCCCCCchhCCHHHHH
Confidence 566666655444433333
No 101
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=29.12 E-value=3.5 Score=23.19 Aligned_cols=24 Identities=21% Similarity=0.553 Sum_probs=15.1
Q ss_pred CCCcccceeeecccCCCCceeeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.-++|.|.+|.........+..|-
T Consensus 5 gekp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 5 KPARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp SCCCCEETTTTEECSCHHHHHHHH
T ss_pred CccCeECCCCCCccCCHhHccCcC
Confidence 346788888866655555555554
No 102
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=28.60 E-value=3 Score=27.01 Aligned_cols=44 Identities=18% Similarity=0.404 Sum_probs=24.1
Q ss_pred CcccceeeecccCCCCceeeec-CCCCCCC-CCCC-CCceecccchh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHA-GSIFSTS-SKPW-QGPFLCADCRN 109 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~-gs~~~~~-~~pW-~GPFLC~sCq~ 109 (125)
.-..|+||..++..++.+.+-. |..|+.. +..| .....|.-|+.
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~ 85 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 85 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCC
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCc
Confidence 4568999999988877554322 4333211 1222 22335666654
No 103
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=28.51 E-value=4.9 Score=23.67 Aligned_cols=43 Identities=16% Similarity=0.430 Sum_probs=28.5
Q ss_pred cccCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 61 VQSTSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 61 ~~~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
.....++|.|-+|.........+..|-..- .-+-||.|..|..
T Consensus 11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H------~~~~~~~C~~C~k 53 (74)
T 2lce_A 11 MTHSDKPYKCDRCQASFRYKGNLASHKTVH------TGEKPYRCNICGA 53 (74)
T ss_dssp CCCCCCSBCCTTSSCCBSCHHHHHHHHHHH------CCCCSEECTTTCC
T ss_pred ccCCCCCeECCCCCceeCCHHHHHHHHHHc------CCCCCEECCCCCc
Confidence 334568899999987776666666664211 1235799999965
No 104
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=28.10 E-value=17 Score=22.19 Aligned_cols=15 Identities=27% Similarity=0.696 Sum_probs=12.2
Q ss_pred CCCCCceecccchhh
Q 033174 96 KPWQGPFLCADCRNK 110 (125)
Q Consensus 96 ~pW~GPFLC~sCq~K 110 (125)
+..+|+.||-.|-.-
T Consensus 20 ~gp~G~~LCNaCGl~ 34 (46)
T 1gnf_A 20 RDRTGHYLCNACGLY 34 (46)
T ss_dssp CCTTCCCBCSHHHHH
T ss_pred cCCCCCccchHHHHH
Confidence 456899999999764
No 105
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.65 E-value=3.2 Score=22.22 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=22.6
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2ytd_A 9 GEKPYKCSECGKAFHRHTHLNEHRRI--HT----GYRPSGPSSG 46 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHHH--HT----CCCSSCSSCC
T ss_pred CCcCeECCCCCCeeCChHHHHHHHHH--cC----CCCCCCCCCC
Confidence 34678888887666655555555311 11 1346778776
No 106
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=27.13 E-value=26 Score=24.77 Aligned_cols=16 Identities=6% Similarity=0.140 Sum_probs=12.0
Q ss_pred CCCceecccchhhhhh
Q 033174 98 WQGPFLCADCRNKKDA 113 (125)
Q Consensus 98 W~GPFLC~sCq~KKdA 113 (125)
.+|-.+|..|-.+..+
T Consensus 113 ~~g~~~C~~c~~~~~~ 128 (169)
T 2rgt_A 113 EDSRLVCKADYETAKQ 128 (169)
T ss_dssp TTSCEEEHHHHHHHHH
T ss_pred cCCeEECHHHHHHHhh
Confidence 4777889999877544
No 107
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.05 E-value=3.2 Score=22.21 Aligned_cols=38 Identities=16% Similarity=0.206 Sum_probs=22.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... .. -+-||.|..|
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~--H~----~~k~~~C~~C 46 (46)
T 2en6_A 9 GEKPYGCNECGKTFSQKSILSAHQRT--HT----GEKPSGPSSG 46 (46)
T ss_dssp SSCCEEETTTTEEESSHHHHHHHHHH--HS----SCCCSSSCCC
T ss_pred CCcCeECCCCCcccCchHHHHHHHHH--cC----CCCCCCCCCC
Confidence 45678888887666665555555421 11 1346777766
No 108
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.81 E-value=3.8 Score=22.02 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=22.1
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|.-.- . -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H--~----~~k~~~C~~C 46 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGSYRLTQHWITH--T----REKPSGPSSG 46 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHHHHHHTHH--H----HCCCCSCCCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHHHc--C----CCCCCCCCCC
Confidence 446788888876665555555553211 1 1246777766
No 109
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=26.78 E-value=17 Score=22.23 Aligned_cols=11 Identities=36% Similarity=0.755 Sum_probs=8.9
Q ss_pred CCCceecccchh
Q 033174 98 WQGPFLCADCRN 109 (125)
Q Consensus 98 W~GPFLC~sCq~ 109 (125)
|.| |.|.+|+-
T Consensus 25 ~~G-~kC~~Ck~ 35 (49)
T 1kbe_A 25 IFG-VKCKHCRL 35 (49)
T ss_dssp CCE-EEETTTTE
T ss_pred ECc-CCCCCCCC
Confidence 677 99999974
No 110
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.54 E-value=3.2 Score=22.38 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=22.4
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|.+|.........+..|... +. -+-||.|..|
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C 46 (46)
T 2ytm_A 9 GEKPYKCMECGKAFGDNSSCTQHQRL--HT----GQRPSGPSSG 46 (46)
T ss_dssp SCCSSSBTTTTBCCSSHHHHHHHHHH--HH----SCCCCCCCCC
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHHH--cC----CCCCCCCCCC
Confidence 45678888887666655555555421 11 1346777766
No 111
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.53 E-value=21 Score=18.72 Aligned_cols=8 Identities=38% Similarity=1.248 Sum_probs=4.4
Q ss_pred ceecccch
Q 033174 101 PFLCADCR 108 (125)
Q Consensus 101 PFLC~sCq 108 (125)
||.|..|.
T Consensus 10 ~~~C~~C~ 17 (45)
T 2epq_A 10 PYSCPVCG 17 (45)
T ss_dssp SSEETTTT
T ss_pred CCcCCCCC
Confidence 55555554
No 112
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.49 E-value=20 Score=21.46 Aligned_cols=14 Identities=21% Similarity=0.541 Sum_probs=10.5
Q ss_pred CCCceecccchhhh
Q 033174 98 WQGPFLCADCRNKK 111 (125)
Q Consensus 98 W~GPFLC~sCq~KK 111 (125)
.+|...|..|-.+.
T Consensus 51 ~~~~~yC~~cy~~~ 64 (72)
T 1x4k_A 51 KDNQNFCVPCYEKQ 64 (72)
T ss_dssp ETTEEEEHHHHHHH
T ss_pred cCCeEECHHHHhHH
Confidence 46778898888763
No 113
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.47 E-value=9.6 Score=22.08 Aligned_cols=41 Identities=20% Similarity=0.433 Sum_probs=28.1
Q ss_pred cCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 63 STSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 63 ~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
..-++|.|.+|.........+..|... +. -+-||.|..|..
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~----~~~~~~C~~C~~ 45 (70)
T 1x5w_A 5 SSGHPEKCSECSYSCSSKAALRIHERI--HC----TDRPFKCNYCSF 45 (70)
T ss_dssp CCCCSEECSSSSCEESSHHHHHHHHGG--GC----CSCSEECSSSSC
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHHH--cC----CCCCEeCCCCCC
Confidence 345789999998777666666666532 11 235799999965
No 114
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=26.44 E-value=23 Score=24.41 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=10.8
Q ss_pred CCCCCceecccchhh
Q 033174 96 KPWQGPFLCADCRNK 110 (125)
Q Consensus 96 ~pW~GPFLC~sCq~K 110 (125)
-..+|-..|..|-.+
T Consensus 106 ~~~dg~~yC~~cy~~ 120 (123)
T 2l4z_A 106 YTKSGMILCRNDYIR 120 (123)
T ss_dssp BCSSSCCBCHHHHHH
T ss_pred EEECCEEeCHHHhhh
Confidence 456777888888765
No 115
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=26.30 E-value=4.3 Score=26.32 Aligned_cols=37 Identities=19% Similarity=0.555 Sum_probs=26.8
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
-++|.|.+|.........+..|-.. + +.||.|..|..
T Consensus 72 ~~~~~C~~C~k~f~~~~~l~~H~~~--H------~~~~~C~~C~k 108 (129)
T 2wbt_A 72 ISQFVCPLCLMPFSSSVSLKQHIRY--T------EHTKVCPVCKK 108 (129)
T ss_dssp HCSEECTTTCCEESSHHHHHHHHHH--T------CCCCBCTTTCC
T ss_pred CCCeECCCCCcccCCHhHHHHHHHH--C------CCCCCCCCCCc
Confidence 5789999998777666666666532 1 56799999964
No 116
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=26.07 E-value=23 Score=22.16 Aligned_cols=43 Identities=23% Similarity=0.592 Sum_probs=29.9
Q ss_pred cccceeeecccCCCCceeeec---CCCCCCCCCCCCCceecccchhhhhh
Q 033174 67 LFTCAVCQIDLAPSEGISVHA---GSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh~---gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
.++|.||.-.-.+.+|-..++ |..|..-...| .|..|...|+.
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw----~CP~Cga~K~~ 48 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADW----VCPDCGVGKID 48 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTC----CCTTTCCCGGG
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCC----cCCCCCCCHHH
Confidence 578999988888877766554 44443333444 79999888776
No 117
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.66 E-value=12 Score=20.02 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=17.6
Q ss_pred CCCcccceeeecccCCCCceeeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.-++|.|.+|.........+..|.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRVSSHLVQHH 32 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHHHHHHT
T ss_pred CCcccCCCCCCcccCcHHHHHHHH
Confidence 457889999977777666666664
No 118
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=25.27 E-value=14 Score=22.48 Aligned_cols=47 Identities=26% Similarity=0.568 Sum_probs=28.0
Q ss_pred CCCcccceeeecccCCCCceeeec-CCCCCC-CCCCC-CCceecccchhh
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA-GSIFST-SSKPW-QGPFLCADCRNK 110 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~-gs~~~~-~~~pW-~GPFLC~sCq~K 110 (125)
...-+.|+||+.++...+-+.+=. |..|.. =+..| .....|.-|+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~ 61 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKS 61 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCc
Confidence 344578999988887665443222 555532 23444 333578888776
No 119
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=25.10 E-value=30 Score=23.52 Aligned_cols=44 Identities=23% Similarity=0.563 Sum_probs=30.8
Q ss_pred CcccceeeecccCCCCceeeec---CCCCCCCCCCCCCceecccchhhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHA---GSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~---gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
..+.|-||.-.-.+.+|-..++ |..|..-... |.|..|...|+.
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPdd----W~CPvCga~K~~ 72 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDD----WSCPDCGAAKSD 72 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTT----CCCTTTCCCGGG
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCC----CcCCCCCCCHHH
Confidence 5799999988888877766544 4433333333 479999998886
No 120
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=25.10 E-value=36 Score=21.33 Aligned_cols=44 Identities=30% Similarity=0.652 Sum_probs=31.6
Q ss_pred CcccceeeecccCCCCceeeec---CCCCCCCCCCCCCceecccchhhhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHA---GSIFSTSSKPWQGPFLCADCRNKKDA 113 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~---gs~~~~~~~pW~GPFLC~sCq~KKdA 113 (125)
+.|+|.||.---.+..|-..++ |-.|..-...| .|..|...|+.
T Consensus 2 ~~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw----~CP~Cg~~K~~ 48 (54)
T 4rxn_A 2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDW----VCPLCGVGKDE 48 (54)
T ss_dssp CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTC----BCTTTCCBGGG
T ss_pred CceECCCCCeEECCCcCCcccCcCCCCChhHCCCCC----cCcCCCCcHHH
Confidence 3579999988888888776654 55554444555 69999888775
No 121
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=25.03 E-value=26 Score=15.94 Aligned_cols=11 Identities=27% Similarity=0.854 Sum_probs=8.3
Q ss_pred CCceecccchh
Q 033174 99 QGPFLCADCRN 109 (125)
Q Consensus 99 ~GPFLC~sCq~ 109 (125)
+-||.|..|..
T Consensus 1 ~k~~~C~~C~~ 11 (30)
T 2m0d_A 1 MKPYQCDYCGR 11 (30)
T ss_dssp CCCEECTTTCC
T ss_pred CcCccCCCCCc
Confidence 35899999864
No 122
>2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I
Probab=24.96 E-value=30 Score=22.75 Aligned_cols=34 Identities=24% Similarity=0.542 Sum_probs=22.9
Q ss_pred eecccCCCCceeeec-CCCCCCCCCCCCCceeccc
Q 033174 73 CQIDLAPSEGISVHA-GSIFSTSSKPWQGPFLCAD 106 (125)
Q Consensus 73 Cqvdl~~~egISvh~-gs~~~~~~~pW~GPFLC~s 106 (125)
|-.-+...+|.-+|. |=+....+-|+++||.|.+
T Consensus 22 Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~C~~ 56 (79)
T 2pjy_C 22 CFVSVTETTDKVIHNSSCIAEIDLIPRDRPFVCAP 56 (79)
T ss_dssp EEEEEECSSSCCEEEEEEECTTTSSSSSSCGGGCC
T ss_pred EeEEEEECCCCEEEEECCCChhHcCCCCCCcEeCC
Confidence 755554455655666 5444556778999999964
No 123
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=24.88 E-value=3.6 Score=25.09 Aligned_cols=21 Identities=24% Similarity=0.697 Sum_probs=10.9
Q ss_pred CcccceeeecccCCCCceeee
Q 033174 66 GLFTCAVCQIDLAPSEGISVH 86 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh 86 (125)
++|.|.+|.........+..|
T Consensus 2 k~~~C~~C~k~f~~~~~L~~H 22 (88)
T 1llm_C 2 KPFQCRICMRNFSRSDHLTTH 22 (88)
T ss_dssp CCEECTTTCCEESCHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHH
Confidence 356666665554444444444
No 124
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.59 E-value=32 Score=21.83 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=11.0
Q ss_pred CCCCceecccchhhhhh
Q 033174 97 PWQGPFLCADCRNKKDA 113 (125)
Q Consensus 97 pW~GPFLC~sCq~KKdA 113 (125)
..+|...|..|-.++-+
T Consensus 59 ~~~g~~yC~~~y~~~f~ 75 (91)
T 2d8y_A 59 SLHGRIYCKPHFNQLFK 75 (91)
T ss_dssp CSSSCCCCHHHHHHHSC
T ss_pred eECCEEECHHHHHHHhC
Confidence 44677778777766433
No 125
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=24.24 E-value=3.6 Score=25.15 Aligned_cols=38 Identities=24% Similarity=0.494 Sum_probs=24.8
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
++|.|.+|.........+..|... +. -+-||.|..|.+
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~--Ht----~ekp~~C~~C~k 40 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRA--HL----GYRPRSCPECGK 40 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH--HH----TCCCEECTTTCC
T ss_pred CCccCCCCCCEeCCHHHHHHHHHH--hC----CCcCeECCCCCC
Confidence 678999997776666566655421 11 134899998864
No 126
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=24.03 E-value=24 Score=20.75 Aligned_cols=16 Identities=44% Similarity=0.789 Sum_probs=11.3
Q ss_pred ccceeeecccCCCCce
Q 033174 68 FTCAVCQIDLAPSEGI 83 (125)
Q Consensus 68 f~CAvCqvdl~~~egI 83 (125)
-+|+.|...+.+++.+
T Consensus 12 ~~C~~C~~~i~~~e~~ 27 (72)
T 3f6q_B 12 ATCERCKGGFAPAEKI 27 (72)
T ss_dssp CBCTTTCCBCCTTCEE
T ss_pred ccchhcCccccCCceE
Confidence 3788887777777654
No 127
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=23.96 E-value=3.8 Score=24.01 Aligned_cols=40 Identities=15% Similarity=0.361 Sum_probs=23.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
..++|.|.+|.........+..|...- .-+.||.|..|..
T Consensus 26 ~~~~~~C~~C~~~f~~~~~l~~H~~~h------~~~~~~~C~~C~~ 65 (82)
T 2kmk_A 26 DTRPYPCQYCGKRFHQKSDMKKHTFIH------TGEKPHKCQVCGK 65 (82)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHHHH------HTCCCEECTTTSC
T ss_pred CCCCeeCCcCChhhCCHHHHHHHHHHh------cCCCCCcCCCcch
Confidence 346788888876666555555554211 1245788888854
No 128
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.80 E-value=10 Score=20.11 Aligned_cols=24 Identities=13% Similarity=0.412 Sum_probs=16.8
Q ss_pred CCCcccceeeecccCCCCceeeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.-++|.|.+|.........+..|-
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eq2_A 9 GGKPYQCNECGKAFSQTSKLARHQ 32 (46)
T ss_dssp SSCSSSCCSSCCCCSSHHHHHHHG
T ss_pred CCCCeECCCCCcccCCHHHHHHHH
Confidence 346789999977666666666664
No 129
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.69 E-value=50 Score=20.31 Aligned_cols=16 Identities=19% Similarity=0.472 Sum_probs=8.8
Q ss_pred cCCCcccceeeecccC
Q 033174 63 STSGLFTCAVCQIDLA 78 (125)
Q Consensus 63 ~~~~lf~CAvCqvdl~ 78 (125)
++...-+|+.|...|.
T Consensus 11 ~~~~~~~C~~C~~~I~ 26 (79)
T 1x62_A 11 NAQKLPMCDKCGTGIV 26 (79)
T ss_dssp CCCCCCCCSSSCCCCC
T ss_pred CCCCCCccccCCCCcc
Confidence 3444556666655554
No 130
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.62 E-value=33 Score=21.55 Aligned_cols=17 Identities=18% Similarity=0.487 Sum_probs=8.7
Q ss_pred cccceeeecccCCCCce
Q 033174 67 LFTCAVCQIDLAPSEGI 83 (125)
Q Consensus 67 lf~CAvCqvdl~~~egI 83 (125)
..+|+.|...|..++-|
T Consensus 15 ~~~C~~C~~~I~~~~~v 31 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSL 31 (80)
T ss_dssp CSCCTTTCCCCSSSCCE
T ss_pred CCCCcCcCCeeCCCeEE
Confidence 34555555555544433
No 131
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=23.27 E-value=8.6 Score=18.06 Aligned_cols=20 Identities=15% Similarity=0.544 Sum_probs=9.9
Q ss_pred cccceeeecccCCCCceeee
Q 033174 67 LFTCAVCQIDLAPSEGISVH 86 (125)
Q Consensus 67 lf~CAvCqvdl~~~egISvh 86 (125)
+|.|.+|.........+..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHH
T ss_pred CcCCcccCcccCChHHHHHH
Confidence 46666665444433333333
No 132
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.83 E-value=33 Score=20.97 Aligned_cols=33 Identities=15% Similarity=0.376 Sum_probs=20.9
Q ss_pred CcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhhh
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKK 111 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~KK 111 (125)
.=|.|++|+..|..+. .. .-+|...|..|-.++
T Consensus 40 ~CF~C~~C~~~L~~~~-~~------------~~~~~~yC~~~y~~~ 72 (80)
T 1x3h_A 40 ECFVCGDCFTSFSTGS-FF------------ELDGRPFCELHYHHR 72 (80)
T ss_dssp TTCBCSSSCCBSCSSC-CE------------ESSSCEECHHHHHHH
T ss_pred CcCChhhCCCCCCCCc-EE------------eECCEEECHHHHHHH
Confidence 4578888877775431 21 236677788887664
No 133
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.53 E-value=11 Score=20.04 Aligned_cols=24 Identities=17% Similarity=0.433 Sum_probs=15.9
Q ss_pred CCCcccceeeecccCCCCceeeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.-++|.|.+|.........+..|.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~ 32 (46)
T 2ytp_A 9 GERHYECSECGKAFARKSTLIMHQ 32 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHH
T ss_pred CCCCeECCcCCcccCCHHHHHHHH
Confidence 346788888876666555555554
No 134
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=22.31 E-value=22 Score=24.47 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=14.2
Q ss_pred CCCCCCceecccchhhh
Q 033174 95 SKPWQGPFLCADCRNKK 111 (125)
Q Consensus 95 ~~pW~GPFLC~sCq~KK 111 (125)
+..=+|-++|..|+++-
T Consensus 163 v~~~~g~~~c~~c~~~~ 179 (184)
T 1pvm_A 163 VYNEKGEIKVFRCSNPA 179 (184)
T ss_dssp EECTTSCEEEEEESCTT
T ss_pred eEEECCEEEccccCCcc
Confidence 56668999999999874
No 135
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.11 E-value=49 Score=19.76 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=15.8
Q ss_pred cCCCcccceeeecccCCCCcee
Q 033174 63 STSGLFTCAVCQIDLAPSEGIS 84 (125)
Q Consensus 63 ~~~~lf~CAvCqvdl~~~egIS 84 (125)
.......|+||+.++...+.+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~ 32 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELG 32 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEE
T ss_pred cCCCCCCCcCCCcccCCCCcEE
Confidence 3445668999999987766553
No 136
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=21.97 E-value=33 Score=15.67 Aligned_cols=10 Identities=40% Similarity=1.042 Sum_probs=7.8
Q ss_pred Cceecccchh
Q 033174 100 GPFLCADCRN 109 (125)
Q Consensus 100 GPFLC~sCq~ 109 (125)
-||.|..|..
T Consensus 2 k~~~C~~C~k 11 (27)
T 2kvh_A 2 KPFSCSLCPQ 11 (27)
T ss_dssp CCEECSSSSC
T ss_pred cCccCCCcCh
Confidence 5889998864
No 137
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=21.84 E-value=5.3 Score=22.81 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=26.8
Q ss_pred CCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
.-++|.|.+|.........+..|--..-. .-+.||.|..|..
T Consensus 7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~----~~~~~~~C~~C~k 48 (66)
T 2drp_A 7 GEHTYRCKVCSRVYTHISNFCRHYVTSHK----RNVKVYPCPFCFK 48 (66)
T ss_dssp ETTEEECTTTCCEESSHHHHHHHHHHHSS----SSCCCEECTTTCC
T ss_pred CCcceECCCCcchhCCHHHHHHHHHHHcC----CCCcCeECCCCCC
Confidence 34789999997776666666555422100 1246899999964
No 138
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=21.65 E-value=18 Score=24.78 Aligned_cols=23 Identities=17% Similarity=0.505 Sum_probs=5.5
Q ss_pred CCcccceeeecccCCCCceeeec
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.++|.|.+|.........+..|.
T Consensus 19 ~~~~~C~~C~~~f~~~~~l~~H~ 41 (190)
T 2i13_A 19 EKPYACPECGKSFSRSDHLAEHQ 41 (190)
T ss_dssp ------------CCSSHHHHHGG
T ss_pred CCCCcCCCCccccCCHHHHHHHH
Confidence 35566666655555554455553
No 139
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=21.48 E-value=27 Score=22.96 Aligned_cols=21 Identities=33% Similarity=0.683 Sum_probs=16.0
Q ss_pred cccceeeecccCCCCce-eeec
Q 033174 67 LFTCAVCQIDLAPSEGI-SVHA 87 (125)
Q Consensus 67 lf~CAvCqvdl~~~egI-Svh~ 87 (125)
.-.|+.|.-.|.||.|+ -|-.
T Consensus 3 ~~~C~Fcg~~IyPG~G~~~Vr~ 24 (66)
T 1vq8_U 3 TRECDYCGTDIEPGTGTMFVHK 24 (66)
T ss_dssp -CBCTTTCCBCCSSCCEEEECT
T ss_pred eeEecCcCCcccCCCceEEEee
Confidence 34799999999999995 3443
No 140
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.29 E-value=6.9 Score=24.61 Aligned_cols=42 Identities=19% Similarity=0.357 Sum_probs=23.4
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
..+|.|.+|.........+..|...-. ...-+.||.|..|..
T Consensus 33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~---~~~~~~~~~C~~C~~ 74 (124)
T 2dlq_A 33 EKPFECPKCGKCYFRKENLLEHEARNC---MNRSEQVFTCSVCQE 74 (124)
T ss_dssp CCSCBCTTTCCBCSSHHHHHHHHHHCC---CCSCCCCEECSSSCC
T ss_pred CCCeECCCCCchhcCHHHHHHHHhhhh---cCCCCCCeECCCCCC
Confidence 356777777666555555555542110 122345788887764
No 141
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=20.98 E-value=12 Score=24.20 Aligned_cols=43 Identities=19% Similarity=0.391 Sum_probs=30.3
Q ss_pred ccCCCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchhh
Q 033174 62 QSTSGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNK 110 (125)
Q Consensus 62 ~~~~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~K 110 (125)
....+.|.|.+|......-..+..|...- .. +-||-|..|.+.
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H--~~----~k~~~C~~C~k~ 65 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRLL--HA----AQVFPCKYCPAT 65 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHTT--SC----SSSEECTTSSCE
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhhc--cC----CCccCCCCCCCE
Confidence 33557899999988887777777776322 11 238999999653
No 142
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=20.95 E-value=25 Score=22.83 Aligned_cols=15 Identities=20% Similarity=0.426 Sum_probs=12.2
Q ss_pred CCCCCceecccchhh
Q 033174 96 KPWQGPFLCADCRNK 110 (125)
Q Consensus 96 ~pW~GPFLC~sCq~K 110 (125)
+.++|+.||-.|-..
T Consensus 23 ~gp~G~~LCNACGl~ 37 (63)
T 3dfx_A 23 RNANGDPVCNACGLY 37 (63)
T ss_dssp CCTTSCCCCHHHHHH
T ss_pred CCCCCCchhhHHHHH
Confidence 567899999999654
No 143
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.87 E-value=11 Score=19.96 Aligned_cols=24 Identities=13% Similarity=0.422 Sum_probs=16.1
Q ss_pred CCCcccceeeecccCCCCceeeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.-++|.|.+|.........+..|-
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eq3_A 9 GEKPYECNQCGKAFSVRSSLTTHQ 32 (46)
T ss_dssp CCCSSEETTTTEECSSHHHHHHHH
T ss_pred CCCCeECCCCChhhCCHHHHHHHH
Confidence 346788888876666655555554
No 144
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.84 E-value=19 Score=22.37 Aligned_cols=39 Identities=18% Similarity=0.384 Sum_probs=25.3
Q ss_pred CCcccceeeecccCCCCceeeecCCCCCCCCCCCCCceecccchh
Q 033174 65 SGLFTCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRN 109 (125)
Q Consensus 65 ~~lf~CAvCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sCq~ 109 (125)
-++|.|.+|.........+..|... ..-+.||-|..|..
T Consensus 35 ~~~~~C~~C~~~f~~~~~l~~H~~~------h~~~~~~~C~~C~~ 73 (110)
T 2csh_A 35 LRPYGCGVCGKKFKMKHHLVGHMKI------HTGIKPYECNICAK 73 (110)
T ss_dssp CCSEECTTTSCEESSSHHHHHHHTT------TCCCCCEECSSSCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHH------cCCCCCeeCCCCcc
Confidence 3568888887776666666666422 12245788988864
No 145
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=20.78 E-value=36 Score=24.32 Aligned_cols=15 Identities=33% Similarity=0.997 Sum_probs=11.1
Q ss_pred cceeeecccCCCCce
Q 033174 69 TCAVCQIDLAPSEGI 83 (125)
Q Consensus 69 ~CAvCqvdl~~~egI 83 (125)
+|+.|...|.+.+.+
T Consensus 121 kC~~C~~~I~~~~~v 135 (182)
T 2jtn_A 121 KCAACQLGIPPTQVV 135 (182)
T ss_dssp CCTTTCCCCCSSCCC
T ss_pred ccccCCCccCCCceE
Confidence 788898888776543
No 146
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=20.75 E-value=38 Score=22.48 Aligned_cols=13 Identities=23% Similarity=0.736 Sum_probs=9.4
Q ss_pred CcccceeeecccC
Q 033174 66 GLFTCAVCQIDLA 78 (125)
Q Consensus 66 ~lf~CAvCqvdl~ 78 (125)
.-|+|++|+..|.
T Consensus 29 ~CF~C~~C~~~L~ 41 (114)
T 1j2o_A 29 DCLSCDLCGCRLG 41 (114)
T ss_dssp TTCCCSSSCSCCC
T ss_pred hcCcccccCCchh
Confidence 4578888877775
No 147
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=20.70 E-value=53 Score=22.02 Aligned_cols=47 Identities=9% Similarity=-0.071 Sum_probs=31.6
Q ss_pred cceeeecccCCCCceeeecCCCC-CCCCCCCCCceecccchhhhhhccC
Q 033174 69 TCAVCQIDLAPSEGISVHAGSIF-STSSKPWQGPFLCADCRNKKDAMEG 116 (125)
Q Consensus 69 ~CAvCqvdl~~~egISvh~gs~~-~~~~~pW~GPFLC~sCq~KKdAmEG 116 (125)
+|+.|+..|.++ .|.+-+.... ....-.-+|-.+|..|-.+.++=.|
T Consensus 71 ~C~~C~~~I~~~-~~~~~g~~~l~g~~f~~~~~~~yC~~~~~~~~~~~g 118 (122)
T 1m3v_A 71 AGGSGGHMGSGG-DVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANG 118 (122)
T ss_dssp SSSCSSCCSCCE-ESSSSSSSSCCSCTTCCTTCCCCEECTTTTTTCCSC
T ss_pred ccccCCCCcCch-heEEcCCcCCCCCccEecCCEeEccCcchhchhhcC
Confidence 799998888764 3544333333 4455777899999999888554333
No 148
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.67 E-value=14 Score=19.52 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=23.6
Q ss_pred CCCcccce--eeecccCCCCceeeecCCCCCCCCCCCCCceecccc
Q 033174 64 TSGLFTCA--VCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADC 107 (125)
Q Consensus 64 ~~~lf~CA--vCqvdl~~~egISvh~gs~~~~~~~pW~GPFLC~sC 107 (125)
.-++|.|. +|.........+..|.-. + .-+-||.|..|
T Consensus 9 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H----~~~k~~~C~~C 48 (48)
T 2ent_A 9 GEKPFACTWPGCGWRFSRSDELSRHRRS--H----SGVKPSGPSSG 48 (48)
T ss_dssp CCCCEECCSSSCCCEESSHHHHHHHHTT--S----CCCCSCSSCCC
T ss_pred CCCCeECCCCCCCCccCCHHHHHHHHHH--h----CCCCCCCCCCC
Confidence 34678898 787666665556666422 1 12457888776
No 149
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=20.38 E-value=39 Score=21.44 Aligned_cols=22 Identities=32% Similarity=0.516 Sum_probs=14.3
Q ss_pred CcccceeeecccCCCCceeeecC
Q 033174 66 GLFTCAVCQIDLAPSEGISVHAG 88 (125)
Q Consensus 66 ~lf~CAvCqvdl~~~egISvh~g 88 (125)
.-|+|++|+..|. +.....+.|
T Consensus 32 ~CF~C~~C~~~L~-~~~~~~~~g 53 (101)
T 2cup_A 32 TCFRCAKCLHPLA-NETFVAKDN 53 (101)
T ss_dssp TTCCCSSSCCCTT-SSCCEEETT
T ss_pred cCCcccccCCCCC-cCeeECcCC
Confidence 5688999988883 434444444
No 150
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.17 E-value=15 Score=19.41 Aligned_cols=24 Identities=21% Similarity=0.558 Sum_probs=15.6
Q ss_pred CCCcccceeeecccCCCCceeeec
Q 033174 64 TSGLFTCAVCQIDLAPSEGISVHA 87 (125)
Q Consensus 64 ~~~lf~CAvCqvdl~~~egISvh~ 87 (125)
.-++|.|.+|.........+..|.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2em6_A 9 GEKCYKCDVCGKEFSQSSHLQTHQ 32 (46)
T ss_dssp CCCCCBCSSSCCBCSSHHHHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHHHHH
Confidence 346788888876665555555553
No 151
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.08 E-value=64 Score=19.98 Aligned_cols=12 Identities=33% Similarity=1.018 Sum_probs=7.0
Q ss_pred CCceecccchhh
Q 033174 99 QGPFLCADCRNK 110 (125)
Q Consensus 99 ~GPFLC~sCq~K 110 (125)
+|...|..|-.+
T Consensus 59 ~g~~yC~~cy~~ 70 (79)
T 2cor_A 59 KGELYCLPCHDK 70 (79)
T ss_dssp TTEEECHHHHHT
T ss_pred CCEEeCHHHHHH
Confidence 455566666554
Done!