BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033176
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVL-KAVRRAGKRAEFWPY 59
M C GCER V+ ++ ++GV SV +E + KVT VGYVD NKV+ + R GK+ E WPY
Sbjct: 34 MDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPY 93
Query: 60 PNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTLPVTHRGDDKVSNMFNDDNV 119
Y A+ Y ++ K Y R + G L + + + F+D+N
Sbjct: 94 VP---YDVVAHPYAAGVYDK-KAPSGYVRRVDDPGVSQ--LARASSTEVRYTTAFSDENP 147
Query: 120 NACCLM 125
AC +M
Sbjct: 148 AACVVM 153
>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorhizobium medicae
(strain WSM419) GN=actP PE=1 SV=1
Length = 827
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV--GYVDRNKVLKAVRRAG 51
M C C R V+ AI + GV S V L E+ T G + VL+AV +AG
Sbjct: 24 MTCASCVRRVEKAIAAVPGVASANVNLATERATVQFNGVPETTSVLRAVEKAG 76
>sp|P37617|ATZN_ECOLI Lead, cadmium, zinc and mercury-transporting ATPase OS=Escherichia
coli (strain K12) GN=zntA PE=1 SV=1
Length = 732
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVD-RNKVLKAVRRAG 51
M C C R V+NA+ +L GV+ V+V EK+ D R +V A+++AG
Sbjct: 57 MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAG 108
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTA-VGYVDRNKVLKAVRRAGKRAEFWP 58
M C GC + V + K+ GV +++++LE +KV+ + +++LK +++ GK+
Sbjct: 9 MTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCESSKMGADELLKNIQKTGKKCSIIA 67
>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti (strain 1021)
GN=actP2 PE=3 SV=1
Length = 827
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAV--GYVDRNKVLKAVRRAG 51
M C C R V+ AI + GV S V L E+ T G D VL A+ +AG
Sbjct: 24 MTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGEPDTLAVLHAIEKAG 76
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 54
M C C V +++ L G+ +++L+ VT G V ++++KA++ GK A
Sbjct: 13 MECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAIQSTGKDA 66
>sp|P58341|ATCU1_RHIME Copper-transporting ATPase 1 OS=Rhizobium meliloti (strain 1021)
GN=actP1 PE=3 SV=1
Length = 826
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTA--VGYVDRNKVLKAVRRAG 51
M C C R V+ AI + GV S V L E+ + G D VL A+ +AG
Sbjct: 24 MTCASCVRRVEKAISAVPGVASATVNLATERASVQFTGAPDTGGVLLAIEKAG 76
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 3 CTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 54
C C VK A+ ++G++SV+ +L + ++ G ++++KAV+ GK A
Sbjct: 13 CESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNIGKDA 64
>sp|Q8ZCA7|COPA_YERPE Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3
SV=1
Length = 961
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE 55
M C C V+NA+ ++ GV V L G + ++ AV+ AG AE
Sbjct: 235 MSCASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNEALIAAVKNAGYGAE 289
>sp|B1L6M8|ATGT_KORCO tRNA-guanine(15) transglycosylase OS=Korarchaeum cryptofilum
(strain OPF8) GN=tgtA PE=3 SV=1
Length = 590
Score = 32.7 bits (73), Expect = 0.58, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 6 CERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFW--PYPNPP 63
C ++ + GV S++V LE K V VD ++++ RAGK FW +P+
Sbjct: 179 CSERIRELDFDYNGVGSIKVALE--KYDFVTQVDHFMSIRSILRAGKPFHFWGIGHPSTF 236
Query: 64 LYFTSANNYFKDTTNEFKESYNYYRHGYNVGDKHGTL 100
+F + D+ SY+ Y HGTL
Sbjct: 237 AFFAAIGADSFDSA-----SYSLYAEQGRYMTPHGTL 268
>sp|Q91221|SOMA2_ONCNE Somatotropin-2 OS=Oncorhynchus nerka GN=gh2 PE=3 SV=1
Length = 210
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 39 DRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYRHGYNV---GD 95
++ VLK +R + + E W YP+ L T +N+ +N+ E + + G N+ G
Sbjct: 86 QKSSVLKLLRISFRLIESWEYPSQTL--TISNSLMVRNSNQISEKLSDLKVGINLLIEGS 143
Query: 96 KHGTLPV 102
+ G L +
Sbjct: 144 QEGILSL 150
>sp|Q59385|COPA_ECOLI Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12)
GN=copA PE=1 SV=4
Length = 834
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE 55
M C C V+NA+ + GV V L +G +++AV +AG AE
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 162
>sp|Q8XD24|COPA_ECO57 Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7
GN=copA PE=3 SV=3
Length = 834
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAE 55
M C C V+NA+ + GV V L +G +++AV +AG AE
Sbjct: 108 MSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAE 162
>sp|Q5FJH9|RSGA_LACAC Putative ribosome biogenesis GTPase RsgA OS=Lactobacillus
acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
GN=rsgA PE=3 SV=1
Length = 296
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 57 WPYPNPPLYFTSANNYFKDTTNEFKESYNYYRH-GYNVGDKHGTLPVTHRGDDKVSNMFN 115
W N +Y + A+ + NE KES +YY+ GY V + H ++K+ +M
Sbjct: 104 WQKVNVTIYLSKADLISEQRLNEIKESLDYYQKIGYPVFIDY------HHLEEKIGDMIK 157
Query: 116 DDNV 119
D+ +
Sbjct: 158 DNQI 161
>sp|O93360|SOMA2_CARAU Somatotropin-2 OS=Carassius auratus GN=gh2 PE=2 SV=1
Length = 210
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 29 LEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYFTSANNYFKDTTNEFKESYNYYR 88
+E T ++ +LK +R + + E W YP+ L T +N+ N+ E +
Sbjct: 76 IEAPTGKDETQKSSMLKLLRISFRLIESWEYPSQTLSGTVSNSLTAGNPNQITEKLADLK 135
Query: 89 HGYNV 93
G NV
Sbjct: 136 MGINV 140
>sp|Q7NCK4|COMB_GLOVI Probable 2-phosphosulfolactate phosphatase OS=Gloeobacter violaceus
(strain PCC 7421) GN=comB PE=3 SV=1
Length = 236
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 40 RNKVLKAVRRAGKRAEFWPYPNPPLYFTS----ANNYFKDTTNEFKESYNYYRH 89
R +L+ R GK+ E + + N PLY TS F TTN + + RH
Sbjct: 61 REDILRGGERGGKQVEGFDFGNSPLYCTSERVAGKRIFMSTTNGTR-TLERIRH 113
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
SV=1
Length = 1492
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRA 50
M C C R ++ I K+ GV ++V LE EK V Y + + K ++ A
Sbjct: 17 MTCISCVRTIEQQIGKVNGVHHIKVSLE-EKSATVIYNPKLQTPKTLQEA 65
>sp|Q95YF0|CLAP1_CAEEL Protein CLASP-1 OS=Caenorhabditis elegans GN=C07H6.3 PE=3 SV=1
Length = 1378
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 7 ERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRAEFWPYPNPPLYF 66
ER + N YK +D+ E+E + K T Y K R ++ P PP Y
Sbjct: 1073 ERFISNNNYKPCPLDNEEIEKPIMKTTYSTYESTRKEYSQTERIATENQY-STPPPPDYR 1131
Query: 67 TSANNYFKDTTNE 79
TS + K+ ++
Sbjct: 1132 TSTAHLAKNHVDQ 1144
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3
Length = 1491
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRA 50
M C C R ++ I K+ GV ++V LE EK + Y + + K ++ A
Sbjct: 17 MTCISCVRTIEQQIGKVNGVHHIKVSLE-EKSATIIYDPKLQTPKTLQEA 65
>sp|Q4L971|COPZ_STAHJ Copper chaperone CopZ OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=copZ PE=3 SV=2
Length = 68
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVELELEKVTAVGYVDRNKV 43
M C C V++A+ KL GV S EV+L+ +V V Y D N+V
Sbjct: 11 MSCDHCRNAVESALAKLNGVTSAEVDLDKNQVR-VDY-DENRV 51
>sp|O33533|FIXI_RHILV Nitrogen fixation protein FixI OS=Rhizobium leguminosarum bv.
viciae GN=fixI PE=3 SV=1
Length = 761
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 3 CTGCERVVKNAIYKLRGVDSVEVELELEKVTAV-------GYVDRNKVLKAVRRAGKRAE 55
C GC ++ A+ L V + V L +VT V D +K+L + AG RA
Sbjct: 47 CGGCISTIERALLTLPFVKTARVNLTARRVTCVYQEEIEARATDPSKILGEINSAGYRAH 106
Query: 56 FWPYPNPP 63
+ P+ P
Sbjct: 107 LFT-PSAP 113
>sp|Q6L3Z7|R1B14_SOLDE Putative late blight resistance protein homolog R1B-14 OS=Solanum
demissum GN=R1B-14 PE=3 SV=1
Length = 1317
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 17 LRGVDSVEVELELEKVTAVGYVDRNKVLKAVRRAGKRA 54
L GV SV +++ +KVT G +D N+V V + KR
Sbjct: 1278 LPGVKSVRFDMDEKKVTVTGVMDANEVQLVVSKLRKRG 1315
>sp|Q51772|MERA_PSEFL Mercuric reductase OS=Pseudomonas fluorescens GN=merA PE=3 SV=1
Length = 548
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 1 MCCTGCERVVKNAIYKLRGVDSVEVEL--ELEKVTAVGYVDRNKVLKAVRRAG 51
M CT C VK+A+ K+ GV++ V +V A V N++L A+ G
Sbjct: 9 MTCTSCATHVKDALEKIPGVNAAVVSYPESRAQVMADTAVSHNQLLAAIAALG 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,946,070
Number of Sequences: 539616
Number of extensions: 1991861
Number of successful extensions: 4819
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4793
Number of HSP's gapped (non-prelim): 40
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)