BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033181
(125 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/125 (88%), Positives = 119/125 (95%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS+VEDCNAVIENLDG EY GR LRVNFSDKPKPKLPLY ET++KLFVGNLSWSVT+ESL
Sbjct: 159 MSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESL 218
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
Q FQEYGNV+GARVLYDGE+GRSRGYGFVCYSTKAEM+TALESLNGVELEGRA+R+SLA
Sbjct: 219 NQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLA 278
Query: 121 QGRRS 125
QGRRS
Sbjct: 279 QGRRS 283
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+ + KL+ GNL +S + L Q YG+ VLY+ ++GRSRG+ FV S+ +
Sbjct: 107 SPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCN 166
Query: 100 TALESLNGVELEGRAMRVSLA 120
+E+L+G E GR +RV+ +
Sbjct: 167 AVIENLDGSEYGGRTLRVNFS 187
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 228 bits (581), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/125 (82%), Positives = 119/125 (95%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS++EDC VIENLDG +Y+GRILRVNF+DKPKPK PLY ET++KLF+GNLSWSVT+ESL
Sbjct: 155 MSSIEDCETVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESL 214
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYGNVVGARVLYDGE+G+SRGYGFVCYSTK E+ETAL+SLNGVELEGRA+RVSLA
Sbjct: 215 TQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLA 274
Query: 121 QGRRS 125
+GR+S
Sbjct: 275 EGRKS 279
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++V + L QEYG VLY E+GRSRG+ FV S+ + ET +E+
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167
Query: 105 LNGVELEGRAMRVSLA 120
L+G + GR +RV+ A
Sbjct: 168 LDGSQYMGRILRVNFA 183
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 228 bits (580), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/125 (84%), Positives = 118/125 (94%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MSTVEDCNAVIENLDG +++GRILRVNFSDKPKPK PLY ET+ KLFVGNLSWSVT+ESL
Sbjct: 161 MSTVEDCNAVIENLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESL 220
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+AFQEYGN+VGARVLYDGE+GRSRGYGFVCY+T++EME AL SLNGVELEGRAMRVSLA
Sbjct: 221 VEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLA 280
Query: 121 QGRRS 125
QG++S
Sbjct: 281 QGKKS 285
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++V + L Q+YG VLYD ++GRSRG+ FV ST + +E+
Sbjct: 114 KLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIEN 173
Query: 105 LNGVELEGRAMRVSLA 120
L+G + GR +RV+ +
Sbjct: 174 LDGSQFMGRILRVNFS 189
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/125 (83%), Positives = 118/125 (94%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS++EDCNAVIENLD +Y+GRILRVNFSD PKPK PLY ET++KLFVGNLSWS T+ESL
Sbjct: 155 MSSIEDCNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSESL 214
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYGNVVGARVLYDGE+G+SRGYGFVCYSTKAEM+TAL SL+GVELEGRA+RVSLA
Sbjct: 215 TQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLA 274
Query: 121 QGRRS 125
+GR+S
Sbjct: 275 EGRKS 279
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++V + L QEYG+ VLY E+GRSRG+ FV S+ + +E+
Sbjct: 108 KLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIEN 167
Query: 105 LNGVELEGRAMRVSLAQGRR 124
L+ + GR +RV+ + +
Sbjct: 168 LDESQYMGRILRVNFSDNPK 187
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/117 (88%), Positives = 111/117 (94%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS+VEDCNAVIENLDG EY GR LRVNFSDKPKPKLPLY ET++KLFVGNLSWSVT+ESL
Sbjct: 159 MSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESL 218
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
Q FQEYGNV+GARVLYDGE+GRSRGYGFVCYSTKAEM+TALESLNGVELEGRA+RV
Sbjct: 219 NQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRV 275
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +S + L Q YG+ VLY+ ++GRSRG+ FV S+ + +E+
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 105 LNGVELEGRAMRVSLA 120
L+G E GR +RV+ +
Sbjct: 172 LDGSEYGGRTLRVNFS 187
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/125 (82%), Positives = 113/125 (90%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS +EDCNAVIENLDG+E+LGR LRVNFS KPKPK PLY ET+ KLFVGNLSWSVT E L
Sbjct: 158 MSCIEDCNAVIENLDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEIL 217
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYG VVGARVLYDGE+GRSRGYGFVCYST+AEME A+ +LN VELEGRAMRVSLA
Sbjct: 218 TQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLA 277
Query: 121 QGRRS 125
QG+R+
Sbjct: 278 QGKRA 282
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +SV + L Q+YG+ VLYD +SG+SRG+ FV S + +E+
Sbjct: 111 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAVIEN 170
Query: 105 LNGVELEGRAMRVSLA 120
L+G E GR +RV+ +
Sbjct: 171 LDGKEFLGRTLRVNFS 186
>gi|255646669|gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/125 (81%), Positives = 113/125 (90%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS +EDCNAVIENL+G+E+LGR LRVNFS KPKPK PLY ET+ KLFVGNLSWSVT E L
Sbjct: 1 MSCIEDCNAVIENLNGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEIL 60
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYG VVGARVLYDGE+GRSRGYGFVCYST+AEME A+ +LN VELEGRAMRVSLA
Sbjct: 61 TQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLA 120
Query: 121 QGRRS 125
QG+R+
Sbjct: 121 QGKRA 125
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/125 (78%), Positives = 116/125 (92%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS++EDCN VIENLDG Y+GRILRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E L
Sbjct: 150 MSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEIL 209
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYGNVVGARV+YDGE+G+SRGYGFV YSTK+EMETALE++N +ELEGR +RVSLA
Sbjct: 210 TQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLA 269
Query: 121 QGRRS 125
+G+++
Sbjct: 270 EGKQA 274
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +SV + L Q+YG VLYD +G+SRG+ FV S+ + +E+
Sbjct: 103 KLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN 162
Query: 105 LNGVELEGRAMRVSLA 120
L+G GR +RV+ +
Sbjct: 163 LDGSAYMGRILRVNFS 178
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/125 (81%), Positives = 112/125 (89%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS +EDCNAVIENLDG+EYLGR LRVNFS+KPK K PLY ET+ KLFVGNLSWSVT E L
Sbjct: 161 MSCIEDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYPETEHKLFVGNLSWSVTNEIL 220
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYG VVGARVLYDGE+GRSRGYGFVC+STK EME AL +LN VELEGRAMRVSLA
Sbjct: 221 TQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVELEGRAMRVSLA 280
Query: 121 QGRRS 125
+G+R+
Sbjct: 281 EGKRA 285
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +SV + L Q+YG+ VLYD ++G+SRG+ FV S + +E+
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173
Query: 105 LNGVELEGRAMRVSLAQ 121
L+G E GR +RV+ +
Sbjct: 174 LDGKEYLGRTLRVNFSN 190
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 214 bits (544), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 112/125 (89%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS VEDCN VIENLDG+E+LGR LRVN SDKPKPK PLY ET+ KLFVGNLSW+VT+ESL
Sbjct: 149 MSCVEDCNTVIENLDGKEFLGRTLRVNLSDKPKPKEPLYPETEHKLFVGNLSWTVTSESL 208
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
Q FQEYG VVGARVLYDGE+GRSRGYGFVCYS ++E+ETAL SLN VELEGRA+RVSLA
Sbjct: 209 IQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETALISLNNVELEGRAIRVSLA 268
Query: 121 QGRRS 125
+G+RS
Sbjct: 269 EGKRS 273
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +SV + L +EYG+ VLYD +SG+SRG+ FV S + T +E+
Sbjct: 102 KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVIEN 161
Query: 105 LNGVELEGRAMRVSLA 120
L+G E GR +RV+L+
Sbjct: 162 LDGKEFLGRTLRVNLS 177
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 115/125 (92%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS VEDCNAVI+NLDG+E++GR LRVNFSDKPKPK PLY ET++KLFVGNL+W+VT+ESL
Sbjct: 263 MSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESL 322
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQE+G VVGARVL+DGE+G+SRGYGFV Y+TK+EM+TAL ++ VELEGR +RVSLA
Sbjct: 323 TQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLA 382
Query: 121 QGRRS 125
QG+RS
Sbjct: 383 QGKRS 387
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ FV S +
Sbjct: 212 DTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNA 271
Query: 101 ALESLNGVELEGRAMRVSLA 120
+++L+G E GR +RV+ +
Sbjct: 272 VIQNLDGKEFMGRTLRVNFS 291
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 115/125 (92%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS VEDCNAVI+NLDG+E++GR LRVNFSDKPKPK PLY ET++KLFVGNL+W+VT+ESL
Sbjct: 161 MSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESL 220
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQE+G VVGARVL+DGE+G+SRGYGFV Y+TK+EM+TAL ++ VELEGR +RVSLA
Sbjct: 221 TQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLA 280
Query: 121 QGRRS 125
QG+RS
Sbjct: 281 QGKRS 285
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ FV S +
Sbjct: 110 DTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNA 169
Query: 101 ALESLNGVELEGRAMRVSLA 120
+++L+G E GR +RV+ +
Sbjct: 170 VIQNLDGKEFMGRTLRVNFS 189
>gi|359806610|ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/125 (84%), Positives = 113/125 (90%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS +EDCNAVIENLDG+E+LGR LRVNFS KPKPK PLY ET+ KLFVGNLSWSVT E L
Sbjct: 165 MSCIEDCNAVIENLDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEIL 224
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQEYG VVGARVLYDGE+GRSRGYGFVCYSTKAEME AL +LN VELEGRAMRVSLA
Sbjct: 225 TQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALAALNDVELEGRAMRVSLA 284
Query: 121 QGRRS 125
QG+R+
Sbjct: 285 QGKRA 289
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +SV + L Q++G+ VLYD ++G+SRG+ FV S + +E+
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 177
Query: 105 LNGVELEGRAMRVSLA 120
L+G E GR +RV+ +
Sbjct: 178 LDGKEFLGRTLRVNFS 193
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 112/125 (89%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS VEDCNAVI+NLDG+E++GR LRVNFSDKPKPK PLY ET++KLFVGNL+W+VT ES
Sbjct: 161 MSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTFESF 220
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
TQAFQE+G VVGARVL+DGE+G+ RGYGFV Y+TK+EM+TAL ++ VELEGR +RVSLA
Sbjct: 221 TQAFQEHGTVVGARVLFDGETGKFRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLA 280
Query: 121 QGRRS 125
QG+RS
Sbjct: 281 QGKRS 285
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ FV S +
Sbjct: 110 DTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNA 169
Query: 101 ALESLNGVELEGRAMRVSLA 120
+++L+G E GR +RV+ +
Sbjct: 170 VIQNLDGKEFMGRTLRVNFS 189
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 204 bits (518), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 114/125 (91%), Gaps = 1/125 (0%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP-KLPLYAETDFKLFVGNLSWSVTTES 59
MS VEDCN +I+NLDG EYLGR L+VNF+DKPKP K PLY ET+ KLFVGNLSW+VT+ES
Sbjct: 127 MSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSES 186
Query: 60 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 119
L +AF+E G+VVGARV+YDG++GRSRGYGFVCYS+KAEMETALESL+G ELEGRA+RV+L
Sbjct: 187 LAEAFRECGDVVGARVVYDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNL 246
Query: 120 AQGRR 124
AQG++
Sbjct: 247 AQGKK 251
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A + KL+ GNL ++V + +L Q Q++ N VLY+ ++G+SRG+ FV S +
Sbjct: 75 AAINTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCN 134
Query: 100 TALESLNGVELEGRAMRVSLAQGRR 124
+++L+G E GRA++V+ A +
Sbjct: 135 IIIDNLDGTEYLGRALKVNFADKPK 159
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 113/125 (90%), Gaps = 1/125 (0%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP-KLPLYAETDFKLFVGNLSWSVTTES 59
MS VEDCN +I+NLDG EYLGR L+VNF+DKPKP K PLY ET+ KLFVGNLSW+VT+ES
Sbjct: 133 MSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSES 192
Query: 60 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 119
L AF+E G+VVGARV++DG++GRSRGYGFVCYS+KAEMETALESL+G ELEGRA+RV+L
Sbjct: 193 LAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNL 252
Query: 120 AQGRR 124
AQG++
Sbjct: 253 AQGKK 257
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A + KL+ GNL ++V + +L Q Q++ N VLY+ ++G+SRG+ FV S +
Sbjct: 81 AAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCN 140
Query: 100 TALESLNGVELEGRAMRVSLA 120
+++L+G E GRA++V+ A
Sbjct: 141 IIIDNLDGTEYLGRALKVNFA 161
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 107/124 (86%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MST+EDC VI+NLDG Y GR +RVNF+DKPKPKLPLY ET+ KLFVGNLSW+VT+E L
Sbjct: 193 MSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEML 252
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T+ FQ+ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ AL SLNG ELEGR +RV+LA
Sbjct: 253 TEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 312
Query: 121 QGRR 124
G++
Sbjct: 313 LGKK 316
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++ + L Q+Y VLYD +GRSRG+ FV ST + E +++
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 105 LNGVELEGRAMRVSLA 120
L+G GR MRV+ A
Sbjct: 206 LDGSLYSGRTMRVNFA 221
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 107/124 (86%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MST+EDC VI+NLDG Y GR +RVNF+DKPKPKLPLY ET+ KLFVGNLSW+VT+E L
Sbjct: 195 MSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEML 254
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T+ FQ+ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ AL SLNG ELEGR +RV+LA
Sbjct: 255 TEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 314
Query: 121 QGRR 124
G++
Sbjct: 315 LGKK 318
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++ + L Q+Y VLYD +GRSRG+ FV ST + E +++
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 105 LNGVELEGRAMRVSLA 120
L+G GR MRV+ A
Sbjct: 208 LDGSLYSGRTMRVNFA 223
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/125 (72%), Positives = 108/125 (86%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
M+ VEDC AVIENLDG+E++GR LRVNFSDKPK K LY ET++KLF+GNLSW VT+E L
Sbjct: 165 MTCVEDCKAVIENLDGKEFMGRTLRVNFSDKPKAKESLYPETEYKLFIGNLSWKVTSEIL 224
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T+AFQE+G VVGARV+YDGE+G SRGYGFV Y+ K+EME AL +N VELEGRA+RVSLA
Sbjct: 225 TEAFQEHGTVVGARVIYDGETGNSRGYGFVSYANKSEMEAALTIMNDVELEGRALRVSLA 284
Query: 121 QGRRS 125
QG+RS
Sbjct: 285 QGKRS 289
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+T KL+ GNL +SV + L +EYG+ VLYD ++G+SRG+ F + + +
Sbjct: 114 DTRTKLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDCKA 173
Query: 101 ALESLNGVELEGRAMRVSLA 120
+E+L+G E GR +RV+ +
Sbjct: 174 VIENLDGKEFMGRTLRVNFS 193
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 105/124 (84%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MST+EDC VI+NLDG Y GR +RVN +DKPKPK PLY ET+ KLFVGNLSW+VT E L
Sbjct: 181 MSTLEDCERVIKNLDGTLYSGRTMRVNMADKPKPKEPLYPETEHKLFVGNLSWTVTPEML 240
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T AFQ+ G+VVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+E+LNG E+EGR +RV+LA
Sbjct: 241 TDAFQQCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 300
Query: 121 QGRR 124
G+R
Sbjct: 301 LGKR 304
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++ + L Q++ VLYD +GRSRG+ FV ST + E +++
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 193
Query: 105 LNGVELEGRAMRVSLA 120
L+G GR MRV++A
Sbjct: 194 LDGTLYSGRTMRVNMA 209
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 104/124 (83%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MST+EDC VI+NLDG Y GR +RVN +D+PKPK PLY ET+ KLFVGNLSW+VT E L
Sbjct: 182 MSTLEDCERVIKNLDGTLYSGRTMRVNMADRPKPKAPLYPETEHKLFVGNLSWTVTPEML 241
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T AFQ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+E+LNG E+EGR +RV+LA
Sbjct: 242 TDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 301
Query: 121 QGRR 124
G+R
Sbjct: 302 LGKR 305
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++ + L Q++ VLYD +GRSRG+ FV ST + E +++
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 194
Query: 105 LNGVELEGRAMRVSLA 120
L+G GR MRV++A
Sbjct: 195 LDGTLYSGRTMRVNMA 210
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 104/124 (83%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MST+EDC VI+NLDG Y GR +RVN +D+PKPK PLY ET+ KLFVGNLSW+VT E L
Sbjct: 298 MSTLEDCERVIKNLDGTLYSGRTMRVNMADRPKPKAPLYPETEHKLFVGNLSWTVTPEML 357
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T AFQ GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+E+LNG E+EGR +RV+LA
Sbjct: 358 TDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 417
Query: 121 QGRR 124
G+R
Sbjct: 418 LGKR 421
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL ++ + L Q++ VLYD +GRSRG+ FV ST + E +++
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 310
Query: 105 LNGVELEGRAMRVSLA 120
L+G GR MRV++A
Sbjct: 311 LDGTLYSGRTMRVNMA 326
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 105/124 (84%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
M+TV+DC VI+NLDG Y GR ++VNF+D+PKPKLPLY ET+ KLFVGNLSW+VT+E L
Sbjct: 172 MTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKLPLYPETEHKLFVGNLSWTVTSEML 231
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T+AF GNVVGARVLYDGE+GRSRGYGFVCYSTK EM+ A+ SLNG ELEGR +RV+LA
Sbjct: 232 TEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAISSLNGTELEGREIRVNLA 291
Query: 121 QGRR 124
G +
Sbjct: 292 LGNK 295
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 29 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 88
S +P + T KL+ GNL ++ + L QEY + VLYD +GRSRG+
Sbjct: 109 SQDSRPSVAASTTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFA 168
Query: 89 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
FV +T + E +++L+G GR M+V+ A
Sbjct: 169 FVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA 200
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 104/124 (83%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
M+TV+DC VI+NLDG Y GR ++VNF+D+PKPK LY ET+ KLFVGNLSW+VT+E L
Sbjct: 164 MTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEML 223
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T+AF G VVGARVLYDGE+GRSRGYGFVCYST+ EM+ AL SLNG+E+EGR MRV+LA
Sbjct: 224 TEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLA 283
Query: 121 QGRR 124
G++
Sbjct: 284 LGKK 287
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 29 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 88
SD P + + T KL+ GNL ++ + L QEY + VLYD +GRSRG+
Sbjct: 102 SDDSGPSVAA-STTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFA 160
Query: 89 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
FV +T + E +++L+G GR M+V+ A
Sbjct: 161 FVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA 192
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/124 (68%), Positives = 104/124 (83%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
M+TV+DC VI+NLDG Y GR ++VNF+D+PKPK LY ET+ KLFVGNLSW+VT+E L
Sbjct: 164 MTTVQDCELVIKNLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEML 223
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
T+AF G VVGARVLYDGE+GRSRGYGFVCYST+ EM+ AL SLNG+E+EGR MRV+LA
Sbjct: 224 TEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLA 283
Query: 121 QGRR 124
G++
Sbjct: 284 LGKK 287
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 29 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 88
SD P + + T KL+ GNL ++ + L QEY + VLYD +GRSRG+
Sbjct: 102 SDDSGPSVAA-STTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFA 160
Query: 89 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
FV +T + E +++L+G GR M+V+ A
Sbjct: 161 FVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA 192
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 20 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 79
+GRILRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E LTQAFQEYGNVVGARV+YDG
Sbjct: 1 MGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDG 60
Query: 80 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
E+G+SRGYGFV YSTK+EMETALE++N +ELEGR +RV
Sbjct: 61 ETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV 98
>gi|147859670|emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 76/82 (92%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MS+VEDCNAVIENLDG EY GR LRVNFSDKPKPKLPLY ET++KLFVGNLSWSVT+ESL
Sbjct: 114 MSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESL 173
Query: 61 TQAFQEYGNVVGARVLYDGESG 82
Q FQEYGNV+GARVLYDGE+G
Sbjct: 174 NQVFQEYGNVIGARVLYDGETG 195
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+ GNL +S + L Q YG+ VLYD ++GRSRG+ FV S+ + +E+
Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126
Query: 105 LNGVELEGRAMRVSLA 120
L+G E GR +RV+ +
Sbjct: 127 LDGSEYGGRTLRVNFS 142
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 14/139 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS------------DKPKPKLPLYAETD--FKL 46
MS+VED NA++ENLDG +Y GR LRVN DK + + D ++
Sbjct: 159 MSSVEDANALVENLDGSQYGGRTLRVNLREEASRSLRVNLRDKSRSEQRNQTNNDGQHRV 218
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
++GNLSW V E L + F E+GN++ A++++D E+GRSRG+GF+ +ST++E E A+ SLN
Sbjct: 219 YIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASLN 278
Query: 107 GVELEGRAMRVSLAQGRRS 125
G ELEGRAMRV LA R+
Sbjct: 279 GKELEGRAMRVDLALSSRN 297
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 30 DKPKPKLPLY-AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 88
D P+ PL+ K+++GNL +S + L QE+G+V V+YD +GRSRG+
Sbjct: 96 DAPEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFA 155
Query: 89 FVCYSTKAEMETALESLNGVELEGRAMRVSL 119
F S+ + +E+L+G + GR +RV+L
Sbjct: 156 FATMSSVEDANALVENLDGSQYGGRTLRVNL 186
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 95/134 (70%), Gaps = 11/134 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---PKLPLYAETDF--------KLFVG 49
MSTVE+ A I+ +G E GR LRVNF + P+ + P + ++F K++VG
Sbjct: 207 MSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARSPSNFGGFVDSPHKVYVG 266
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NL+WSVT+E+L +A GNV+GA+V+ D E+GRSRG+GFV +S++AE+E A+ ++G+E
Sbjct: 267 NLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLE 326
Query: 110 LEGRAMRVSLAQGR 123
+EGR++RV++A+ R
Sbjct: 327 VEGRSIRVNVAKSR 340
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
P LP KL+VGNL + + +E L + F E G V V+YD SGRSRG+ FV S
Sbjct: 153 PPLP----EGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMS 208
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGRR 124
T E E A++ NG E++GR++RV+ + R
Sbjct: 209 TVEEAEAAIKKFNGFEIDGRSLRVNFPEVPR 239
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 95/134 (70%), Gaps = 11/134 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK---PKLPLYAETDF--------KLFVG 49
MSTVE+ A I+ +G E GR LRVNF + P+ + P + ++F K++VG
Sbjct: 215 MSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPRLQNGRSPARSPSNFGGFVDSPHKVYVG 274
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NL+WSVT+E+L +A GNV+GA+V+ D E+GRSRG+GFV +S++AE+E A+ ++G+E
Sbjct: 275 NLAWSVTSETLREALNGKGNVLGAKVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLE 334
Query: 110 LEGRAMRVSLAQGR 123
+EGR++RV++A+ R
Sbjct: 335 VEGRSIRVNVAKSR 348
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
P LP KL+VGNL + + +E L + F E G V V+YD SGRSRG+ FV S
Sbjct: 161 PPLP----EGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMS 216
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGRR 124
T E E A++ NG E++GR++RV+ + R
Sbjct: 217 TVEEAEAAIKKFNGFEIDGRSLRVNFPEVPR 247
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 13/136 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-------------KLF 47
MS++++ A + +G E GR LRVN P+ + F +L+
Sbjct: 140 MSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEGNRLY 199
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGNLSWSV +L F E G VV A+V+YD ESGRSRG+GFV YS+ E+E A++SLNG
Sbjct: 200 VGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNG 259
Query: 108 VELEGRAMRVSLAQGR 123
EL+GRA+RVS+A+ R
Sbjct: 260 AELDGRAIRVSVAEAR 275
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL ++V + L F+ GNV V+YD +GRSRG+GFV S+ E+E A
Sbjct: 91 DLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAA 150
Query: 103 ESLNGVELEGRAMRV 117
+ NG ELEGRA+RV
Sbjct: 151 QQFNGYELEGRALRV 165
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 16/136 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNF--SDKPKPKLP--------------LYAETDF 44
M+T ED VIE LDG + GR L+V+F S + +P P +
Sbjct: 48 MATQEDAENVIERLDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRSERAPRPAARDDPN 107
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNLSW V +L + F +YG VV ARV+YD ESGRSRG+GFV YS +E++ A++S
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167
Query: 105 LNGVELEGRAMRVSLA 120
L+G E +GR +RV+LA
Sbjct: 168 LDGAEFDGRELRVNLA 183
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++GNL W + L QE+G+V V+YD ESGRSRG+ FV +T+ + E +E
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
L+G ++ GR ++VS Q +++
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQN 81
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 8/131 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKLPLYAETDFKLFVGNLS 52
M+T+E+ A + +G E GR LRVNF P+ P+ ++ +++VGNLS
Sbjct: 138 MTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNRVYVGNLS 197
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W+V +L F+E G V+ A+V+YD +SGRSRG+GFV YS+ E++ A++SLNG EL+G
Sbjct: 198 WNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDG 257
Query: 113 RAMRVSLAQGR 123
RA+RVS+A+ +
Sbjct: 258 RAIRVSVAEAK 268
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL ++V + L F+ GNV V+YD +GRSRG+GFV +T E+E A
Sbjct: 89 DLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAAS 148
Query: 103 ESLNGVELEGRAMRVSL 119
+ NG EL+GR +RV+
Sbjct: 149 KQFNGYELDGRTLRVNF 165
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPLYAETDF----KLFVGNL 51
MST E+ A IE +G + GR LRVN P P+ P ++F KL+VGNL
Sbjct: 69 MSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNL 128
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y + E+ A+ +L+GV+L+
Sbjct: 129 AWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLD 188
Query: 112 GRAMRVSLAQGR 123
GR +RV++A+ +
Sbjct: 189 GRQIRVTVAESK 200
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
+AE D K+FVGNL +SV + L F++ G+V V+YD ++GRSRG+GFV ST E
Sbjct: 17 FAE-DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEA 75
Query: 99 ETALESLNGVELEGRAMRVS 118
A+E NG +GR +RV+
Sbjct: 76 GAAIEQFNGYTFQGRPLRVN 95
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPLYAETDF----KLFVGNL 51
MST E+ A +E +G + GR LRVN P P+ P ++F KL+VGNL
Sbjct: 123 MSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNL 182
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y + E+ A+ +L+GV+L+
Sbjct: 183 AWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLD 242
Query: 112 GRAMRVSLAQGR 123
GR +RV++A+ +
Sbjct: 243 GRQIRVTVAESK 254
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
+AE D K+FVGNL +SV + L F++ G+V V+YD ++GRSRG+GFV ST E
Sbjct: 71 FAE-DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEA 129
Query: 99 ETALESLNGVELEGRAMRVS 118
A+E NG +GR +RV+
Sbjct: 130 GAAVEQFNGYTFQGRPLRVN 149
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPLYAETDF----KLFVGNL 51
MST E+ A +E +G + GR LRVN P P+ P ++F KL+VGNL
Sbjct: 128 MSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNL 187
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y + E+ A+ +L+GV+L+
Sbjct: 188 AWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLD 247
Query: 112 GRAMRVSLAQGR 123
GR +RV++A+ +
Sbjct: 248 GRQIRVTVAESK 259
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
+AE D K+FVGNL +SV + L F++ G+V V+YD ++GRSRG+GFV ST E
Sbjct: 76 FAE-DLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEA 134
Query: 99 ETALESLNGVELEGRAMRVS 118
A+E NG +GR +RV+
Sbjct: 135 GAAVEQFNGYTFQGRPLRVN 154
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 86/135 (63%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKL----PLYAETDFKLFV 48
M+T+E+ I DG + GR +RVNF + P+ P++ + ++ K++
Sbjct: 163 MATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNKFVDSPHKIYA 222
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T++SL AF+ ++ A+++YD SG+SRG+GFV + T + E+ALES+NGV
Sbjct: 223 GNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESMNGV 282
Query: 109 ELEGRAMRVSLAQGR 123
E+EGR +R+++A G+
Sbjct: 283 EVEGRPLRLNIAAGQ 297
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++GNL +++T+ L++ F E G+VV +V+YD + RSRG+ FV +T E + A+
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175
Query: 105 LNGVELEGRAMRVSLAQGRR 124
+G ++ GR +RV+ + R
Sbjct: 176 FDGSQIGGRTVRVNFPEVPR 195
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 86/127 (67%), Gaps = 8/127 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL--------YAETDFKLFVGNLS 52
MSTVED A IE ++G E GR+++VN ++KP L + ++ +K++VGNL+
Sbjct: 121 MSTVEDAQAAIEKMNGTEIGGRVIKVNITEKPLDVSGLNRLTEEAEFIDSPYKVYVGNLA 180
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+VTTE+L + F E GNV+ A+V E+G+S GYGFV +S++A++E A+ + N V LEG
Sbjct: 181 KAVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADVEAAISAFNNVVLEG 240
Query: 113 RAMRVSL 119
+ MRV++
Sbjct: 241 KPMRVNV 247
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E + +L+VGN+ + T E L + F E GNV A V+YD + RSR + FV ST + +
Sbjct: 70 EIERRLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQA 129
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG E+ GR ++V++ +
Sbjct: 130 AIEKMNGTEIGGRVIKVNITE 150
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 4/125 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTV++ + IE L G + GR + VNF K K Y ET ++LFVGNL+WSV
Sbjct: 142 MSTVKEAKSAIEKLQGSDLGGRDMIVNFPAKVLSKKKETDDSYIETPYQLFVGNLAWSVK 201
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
E L F ++GNV A+V+Y G+ G R +GFVC S+++EME A+ SL+G E GR ++
Sbjct: 202 KEILKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLSSQSEMEDAIVSLHGKEFHGRNLK 261
Query: 117 VSLAQ 121
V A+
Sbjct: 262 VRQAR 266
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 25/146 (17%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVN----------FSD------KPKPKL-------- 36
+S+ + I +L G+E+ GR L+V SD KP +
Sbjct: 237 LSSQSEMEDAIVSLHGKEFHGRNLKVRQARPTSKDMVVSDVEENIAKPSTMVEDSMTETV 296
Query: 37 -PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTK 95
+ + + ++V NLS SV ++L++ F ++GNV+ ARVLY ++GRSR YGFV +S++
Sbjct: 297 KATFVGSAYGVYVSNLSLSVKNKALSELFSQHGNVLDARVLYARKAGRSRPYGFVNFSSQ 356
Query: 96 AEMETALESLNGVELEGRAMRVSLAQ 121
AE+E A+ +L+ E R + V A+
Sbjct: 357 AEVEAAIAALDKKEFYERKLVVKEAK 382
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL S LTQ FQE+G V V+ + E+G SRG+ FV ST E ++A+E
Sbjct: 95 KLYVGNLPRSCDIAQLTQLFQEFGTVESVEVVRNEETGISRGFAFVTMSTVKEAKSAIEK 154
Query: 105 LNGVELEGRAMRVSL 119
L G +L GR M V+
Sbjct: 155 LQGSDLGGRDMIVNF 169
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E + E GR+L VN + +P+ + P + F+++VGNL W V
Sbjct: 161 MSTVEEAKKAVEKFNRYEVNGRLLTVNIAAPRGSRPE-RQPRQYDAAFRIYVGNLPWDVD 219
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L Q F E+G VV ARV+YD E+GRSRG+GFV S + E+ A+ +L+G LEGRA++
Sbjct: 220 NDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAALDGQNLEGRAIK 279
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 280 VNVAEER 286
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 35 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
K P E + KLFVGNL + V +++L F++ G V + V+Y+ ++ +SRG+GFV ST
Sbjct: 105 KFPEPPE-EAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMST 163
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQGRRS 125
E + A+E N E+ GR + V++A R S
Sbjct: 164 VEEAKKAVEKFNRYEVNGRLLTVNIAAPRGS 194
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 11/130 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ +E + + GR+L VN + D+P P E F+++VGNL W
Sbjct: 169 MSTVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRP----PRAFEPAFRMYVGNLPW 224
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L Q F E+G VV ARV+YD E+GRSRG+GFV ST+ E++ A+ +L+G L+GR
Sbjct: 225 QVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGR 284
Query: 114 AMRVSLAQGR 123
A+RV++A+ R
Sbjct: 285 AIRVNVAEDR 294
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
PL E + KLFVGNL + V ++L + F + G V A V+Y+ E+ +SRG+GFV ST
Sbjct: 115 PLPPE-EAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVE 173
Query: 97 EMETALESLNGVELEGRAMRVSLAQGR 123
E E A+E N ++ GR + V+ A R
Sbjct: 174 EAEKAVEMFNRYDINGRLLTVNKAAPR 200
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK---------LPLYAETDFKLFVGNL 51
M+TVE+ + +E +G +Y GR L VN K PK P E +++V NL
Sbjct: 157 MNTVEEAESAVEKFNGYDYNGRSLVVN---KASPKGSRPERTERAPRTFEPVLRIYVANL 213
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+W V L Q F E+G +V ARV+YD E+GRSRG+GFV S + EM A+ +L+G LE
Sbjct: 214 AWEVDNSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAALDGQSLE 273
Query: 112 GRAMRVSLAQGR 123
GR +RVS+A+ R
Sbjct: 274 GRTIRVSVAEDR 285
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGN + V +E L F + G V A V+Y+ ++ SRG+GFV +T E E+A+
Sbjct: 108 DAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAV 167
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
E NG + GR++ V+ A + S
Sbjct: 168 EKFNGYDYNGRSLVVNKASPKGS 190
>gi|242046410|ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPL----------YAETDFK 45
MS+ E+ A +E +G + GR LRVN P P+ P + ++ K
Sbjct: 126 MSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDESAPRAPRGGGGGGGGGSFVDSANK 185
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+W V +L F E G V+ A+V+YD ESGRSRG+GFV Y T AE+ A+ +L
Sbjct: 186 VYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAEVNNAISNL 245
Query: 106 NGVELEGRAMRVSLAQGR 123
+G++L+GR +RV++A+ +
Sbjct: 246 DGIDLDGRQIRVTVAESK 263
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E A+
Sbjct: 77 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAV 136
Query: 103 ESLNGVELEGRAMRVS 118
E NG +GR +RV+
Sbjct: 137 EQFNGYTFQGRPLRVN 152
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 87/144 (60%), Gaps = 22/144 (15%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPLYAETDF----------- 44
MST+E+ A + +G E GR LRVN P+ +LP E F
Sbjct: 139 MSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLP-QRENSFSRGPGARGGET 197
Query: 45 -----KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+++VGNLSW+V +L F+E G V+ A+V+YD +SGRS+G+GFV YS+ E+E
Sbjct: 198 FDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAEEVE 257
Query: 100 TALESLNGVELEGRAMRVSLAQGR 123
A++SLNG EL+GRA+RVS+A+ +
Sbjct: 258 DAVDSLNGAELDGRAIRVSVAEAK 281
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D +LFVGNL ++V + L F+ GNV V YD +GRSRG+GFV ST E+E A
Sbjct: 90 DLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAAS 149
Query: 103 ESLNGVELEGRAMRVS 118
+ NG EL+GR +RV+
Sbjct: 150 QQFNGYELDGRPLRVN 165
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 12/132 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKLP----LYAETDFKLFV 48
M +V+D I DG + GRI+RVNF + PK PK+ + ++ K++
Sbjct: 38 MGSVDDAKEAIRMFDGSQVGGRIVRVNFPEVPKGGERLVMGPKIRNNNRDFVDSSHKIYA 97
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W V+++ L F E +V A+V+Y+ +SGRSRG+GFV + T ++E AL+++NGV
Sbjct: 98 GNLGWRVSSQDLKDVFAEQPGLVSAKVIYERDSGRSRGFGFVTFETAQDVEAALKTMNGV 157
Query: 109 ELEGRAMRVSLA 120
E++GR +R++LA
Sbjct: 158 EVQGRELRLNLA 169
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
+T+ LT+ F E G VV V+YD + RSRG+ FV + + + A+ +G ++ GR
Sbjct: 1 MTSSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRI 60
Query: 115 MRVSLAQ 121
+RV+ +
Sbjct: 61 VRVNFPE 67
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAETDFKLFVGNLSWSVTTE 58
MSTVE+ +E L + GR L VN + +P+ P ++ +++VGNL W V
Sbjct: 77 MSTVEEAERAVEMLHRYDINGRNLTVNKAAPRGSRPERPRESDPSLRVYVGNLPWQVDDS 136
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
L Q F E+G V+ ARV+YD +SGRSRG+GFV +T+ E++ A+ +L+G LEGRA+RV+
Sbjct: 137 RLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDAIAALDGQSLEGRALRVN 196
Query: 119 LAQGR 123
+A+ R
Sbjct: 197 VAEER 201
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGN+ + +E L F + G V A V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 31 KLFVGNIPYD-DSEKLANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVEM 89
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+ ++ GR + V+ A R
Sbjct: 90 LHRYDINGRNLTVNKAAPR 108
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 11/130 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ + +E L + GR+L VN + D+P P + +++VGNL W
Sbjct: 164 MSTVEEADKAVEMLHRYDVNGRLLTVNKAAPRGSRVDRP----PRQSGPSLRIYVGNLPW 219
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L Q F E+G VV ARV+YD E+GRSRG+GFV +T+ E++ A+ +L+G L+GR
Sbjct: 220 QVDDSKLVQMFSEHGKVVDARVVYDRETGRSRGFGFVTMATQDELDDAIAALDGQSLDGR 279
Query: 114 AMRVSLAQGR 123
A+RV++A+ R
Sbjct: 280 ALRVNVAEER 289
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V A V+Y+ E+ RSRG+GFV ST E + A+E
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYNRETDRSRGFGFVTMSTVEEADKAVEM 176
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
L+ ++ GR + V+ A R S
Sbjct: 177 LHRYDVNGRLLTVNKAAPRGS 197
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 8/133 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL--------YAETDFKLFVGNLS 52
M ++ED I DG E GRI++VNF+ PK L + ++ K++ GNL
Sbjct: 136 MGSMEDAERAIRMFDGSEIGGRIMKVNFTAIPKRGKRLVMGSNYRGFVDSPHKIYAGNLG 195
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W +T++ L AF E + A+V+Y+ SGRSRGYGFV + T ++E AL S+NGVE++G
Sbjct: 196 WGLTSQDLRDAFAEQPGFLSAKVIYERNSGRSRGYGFVSFETAEDVEAALNSMNGVEVQG 255
Query: 113 RAMRVSLAQGRRS 125
R +R++LA + +
Sbjct: 256 RPLRLNLATDKNT 268
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 31 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 90
KP+P + +LFVGNL +S+ + L Q F E GNVV ++YD RSRG+ FV
Sbjct: 76 KPEPNAS-HTNQSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEIVYDDIMDRSRGFAFV 134
Query: 91 CYSTKAEMETALESLNGVELEGRAMRVSL 119
+ + E A+ +G E+ GR M+V+
Sbjct: 135 TMGSMEDAERAIRMFDGSEIGGRIMKVNF 163
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 80/128 (62%), Gaps = 5/128 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD----KPKPKLPLYA-ETDFKLFVGNLSWSV 55
MSTVE+ +E ++ GR+L VN + +P+ P ++ E ++VGNL W V
Sbjct: 172 MSTVEEAENAVEKFSRYDFDGRLLTVNKASPRGTRPERPPPRHSFEPSLSIYVGNLPWDV 231
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
L Q F E+GNVV ARV+YD E+ RSRG+GFV S + EM+ A+ +L+G L+GR +
Sbjct: 232 DNTRLEQIFSEHGNVVNARVVYDRETRRSRGFGFVTMSDETEMKDAVAALDGQSLDGRPI 291
Query: 116 RVSLAQGR 123
RVS+A+ R
Sbjct: 292 RVSVAEDR 299
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V ++ L F++ G V A V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 125 KLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAENAVEK 184
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ + +GR + V+ A R
Sbjct: 185 FSRYDFDGRLLTVNKASPR 203
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 29/149 (19%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETD------------ 43
MST E +VI+ LDG ++ GR L+V+F P+P+ P + +
Sbjct: 48 MSTNEGAQSVIDRLDGSDFGGRPLKVSF---PQPRENRDNKPRFGNNERGDRRSDRPPRQ 104
Query: 44 ---------FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
K+F+GNLSWS ++L Q F EYG+VV A+V+YD ++G+SRG+GFV S
Sbjct: 105 GSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKSRGFGFVTMSA 164
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQGR 123
+E+ A+++L+G E EGR MRVS A R
Sbjct: 165 ASEVSNAVQNLDGAEFEGREMRVSEAGER 193
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL W+ + L + + +V V+YD +SGRSRG+ FV ST ++ ++
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G + GR ++VS Q R
Sbjct: 61 LDGSDFGGRPLKVSFPQPR 79
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 15/138 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPLY-------------AETDFK 45
MS+VE+ A + +G E GR LRVN P P + ++++ +
Sbjct: 134 MSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENR 193
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+ V NL+W V +L F+E GNV+ ARV+YD ESGRSRG+GFV +S+ E+ +A++SL
Sbjct: 194 VHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSL 253
Query: 106 NGVELEGRAMRVSLAQGR 123
NGV+L GRA+RVSLA +
Sbjct: 254 NGVDLNGRAIRVSLADSK 271
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 28 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 87
FSD P D KLFVGNL ++V + L + F+ GNV V+YD +GRSRG+
Sbjct: 74 FSDGDGPSF----SPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGF 129
Query: 88 GFVCYSTKAEMETALESLNGVELEGRAMRV 117
GFV S+ E E A + NG EL+GRA+RV
Sbjct: 130 GFVTMSSVEEAEAAAQQFNGYELDGRALRV 159
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 15/135 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
+ST + IE LDG E GR LRVN+ P+ P +P K FV
Sbjct: 66 LSTEDAAKTAIEKLDGHELEGRPLRVNYPQVPRGGGGFGGGFGTRPSIPANPA---KCFV 122
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
N+ WSV + L + F +G VV R+L D ESGRSRG GFV ++T E A+ +L+G
Sbjct: 123 ANIPWSVDDQGLQEFFSSHGTVVDCRILTDAESGRSRGIGFVTFATPDEANNAISALDGA 182
Query: 109 ELEGRAMRVSLAQGR 123
EL GR++RV+LA GR
Sbjct: 183 ELGGRSIRVALATGR 197
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
+F +P P KL+VGN++W+V ++ L F G V+YD G+SRG
Sbjct: 9 SFRSEPAPNT--------KLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRG 60
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 124
+ FV ST+ +TA+E L+G ELEGR +RV+ Q R
Sbjct: 61 FAFVTLSTEDAAKTAIEKLDGHELEGRPLRVNYPQVPR 98
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LPLYAETDFKLFVGNLSWS 54
MSTVE+ IE D + GR L VN K P+ P E F+++VGN+ W
Sbjct: 184 MSTVEEVVKAIEMFDRYDINGRTLTVN---KAAPRGSRAERPPRDFEPAFRVYVGNIPWQ 240
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V L Q F EYG V AR+++D E+GRSRG+GFV S++ EME A+ +L+G +L+GRA
Sbjct: 241 VDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIEMEDAIAALDGSDLDGRA 300
Query: 115 MRVSLAQGR 123
++VS+AQ R
Sbjct: 301 IKVSMAQER 309
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + + + L F + G V A V+Y+ E+ +SRG+GFV ST E+ A+E
Sbjct: 137 KIFVGNLPFDLESADLADLFNKAGVVESAEVIYNRETDQSRGFGFVSMSTVEEVVKAIEM 196
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+ ++ GR + V+ A R S
Sbjct: 197 FDRYDINGRTLTVNKAAPRGS 217
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E + GR+L VN + +P+ + P E ++++VGNL W V
Sbjct: 189 MSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPE-RPPRVFEPGYRIYVGNLPWDVD 247
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD ++GRSRG+GFV ST+ E+ A+ +L+G L+GRA+R
Sbjct: 248 NARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAIR 307
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 308 VNVAEQR 314
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL + V ++ L F++ G V A V+Y+ E+ SRG+GFV ST E E A+
Sbjct: 140 DAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAV 199
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
E + +L+GR + V+ A R S
Sbjct: 200 EMFHRHDLDGRLLTVNKAAPRGS 222
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 14/137 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPLYA---------ETDFKL 46
MST E+ +A +E +G + GR LRVN P P+ P ++ KL
Sbjct: 132 MSTAEEVSAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRGMGGGGGGGSFDSGNKL 191
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNLSW V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +L+
Sbjct: 192 YVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLD 251
Query: 107 GVELEGRAMRVSLAQGR 123
GV+L+GR +RV++A+ +
Sbjct: 252 GVDLDGRQIRVTVAESK 268
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
Y+E D KLFVGNL ++V + L F++ G+V V+YD +GRSRG+GFV ST E+
Sbjct: 80 YSE-DLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEV 138
Query: 99 ETALESLNGVELEGRAMRVS 118
A+E NG +GR +RV+
Sbjct: 139 SAAVEQFNGYTFQGRPLRVN 158
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 83/130 (63%), Gaps = 6/130 (4%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP-LYAETDF-----KLFVGNLSWS 54
MS+VE+ A + + E GR LRV LP + +E D ++ VGNLSW
Sbjct: 86 MSSVEEVEAAAQQFNNYELDGRTLRVTEDSHKDMTLPRVESECDSFGSSNRVHVGNLSWK 145
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V ++L F E G+VV A+V+YD ++GRSRG+GFV Y++ E+ TA+ESL+GV+L GR+
Sbjct: 146 VDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAIESLDGVDLNGRS 205
Query: 115 MRVSLAQGRR 124
+RV+ A+ R+
Sbjct: 206 IRVTAAEARQ 215
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 30 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 89
D + P ++ D K+FVGNL ++V + L F G V V+YD +GRSRG+GF
Sbjct: 25 DDDAGRQPNFS-PDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGF 83
Query: 90 VCYSTKAEMETALESLNGVELEGRAMRVS 118
V S+ E+E A + N EL+GR +RV+
Sbjct: 84 VTMSSVEEVEAAAQQFNNYELDGRTLRVT 112
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 175 MSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 233
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S + E+ A+ +L+G +EGRA+R
Sbjct: 234 NGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAIR 293
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 294 VNVAEER 300
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV ST E ETA+E
Sbjct: 128 KLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEK 187
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 188 FNRYDLNGRLLTVNKAAPRGS 208
>gi|255639378|gb|ACU19985.1| unknown [Glycine max]
Length = 142
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPLY-------------AETDFK 45
MS+VE+ A + +G E GR LRVN P P + ++++ +
Sbjct: 1 MSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENR 60
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+ V NL+W V +L F+E GNV+ AR +YD ESGRSRG+GFV +S+ E+ +A++SL
Sbjct: 61 VHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVNSAIQSL 120
Query: 106 NGVELEGRAMRVSLAQGR 123
NGV+L GRA+RVSLA +
Sbjct: 121 NGVDLNGRAIRVSLADSK 138
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 14/136 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-------------LF 47
M+T D + +E +G EY GR LRVN S P PK F+ +F
Sbjct: 161 MATQADADEAVEKFNGYEYQGRTLRVN-SGPPPPKDSFAPRGGFRNEKPSGNYNSANRVF 219
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGNL W SL Q F ++G V+ A+V+YD E+GRSRG+GFV S+ E+E A+ SL+G
Sbjct: 220 VGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSLDG 279
Query: 108 VELEGRAMRVSLAQGR 123
+++GR ++V+LA+ +
Sbjct: 280 SDMDGRQIKVTLAETK 295
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+ K+FVGNL WSV + L + F++ G+V V+YD ++GRSRG+ FV +T+A+ + A+
Sbjct: 112 NLKVFVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAV 171
Query: 103 ESLNGVELEGRAMRVS 118
E NG E +GR +RV+
Sbjct: 172 EKFNGYEYQGRTLRVN 187
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDF-KLFVGNLSWSV 55
M+T ED AVI LDG + GR L+VN+ DKP+ + D KLFVGNLSW
Sbjct: 92 MATPEDAQAVINALDGTDMGGRPLKVNYPQSQKDKPRVERSERPRDDANKLFVGNLSWGC 151
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
+L F EYG VV A+V++D +SGRSRG+GFV + A A+E+L+G EL+GR +
Sbjct: 152 DEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRL 211
Query: 116 RVSLA 120
RV+LA
Sbjct: 212 RVNLA 216
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 37 PLYAETDF--KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
P+ E F KL+VGNL W+ + L + ++G V V+YD SGRSRG+ FV +T
Sbjct: 35 PVAEEEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMAT 94
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQGRR 124
+ + + +L+G ++ GR ++V+ Q ++
Sbjct: 95 PEDAQAVINALDGTDMGGRPLKVNYPQSQK 124
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 13/133 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNF--SDKPKPKL------PLYAE-----TDFKLF 47
M++ +D A+I LDG + GR L+VNF S K KP+ P A+ KLF
Sbjct: 71 MASHDDAQALINALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTADRRPRDDPNKLF 130
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGN+ W ++T F YG+VV A+++YD +SGRSRG+GFV + +TA+E+L+G
Sbjct: 131 VGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENLDG 190
Query: 108 VELEGRAMRVSLA 120
EL+GR +RV+ A
Sbjct: 191 TELDGRELRVNFA 203
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL W+ + L + ++G V V+YD SGRSRG+ FV ++ + + + +
Sbjct: 24 KVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINA 83
Query: 105 LNGVELEGRAMRVSLAQGRR 124
L+G ++ GRA++V+ Q ++
Sbjct: 84 LDGSDMGGRALKVNFPQSQK 103
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKP 34
M V D +ENLDG E GR LRVNF+ + P
Sbjct: 175 MEKVGDAQTAMENLDGTELDGRELRVNFAGEKPP 208
>gi|225463276|ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 86/135 (63%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKLPL----YAETDFKLFV 48
M +V++ I DG + GR ++VNF + P+ PK+ + ++ +K++
Sbjct: 151 MGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYA 210
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW +T+E L AF ++ ++GA+V+Y+ ESGRSRG+GF+ +++ E+AL ++N V
Sbjct: 211 GNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEV 270
Query: 109 ELEGRAMRVSLAQGR 123
E+EGR +R++LA R
Sbjct: 271 EVEGRPLRLNLAAVR 285
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
PK+ AE +L+VGNL +S+T+ L F E G+V+ ++YD + RSRG+ FV
Sbjct: 94 PKVSDSAEAS-RLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMG 152
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGRR 124
+ E + A+ +G ++ GR ++V+ + R
Sbjct: 153 SVQEAKEAIRMFDGSQVGGRTVKVNFPEVPR 183
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LPLYAETDFKLFVGNLSWS 54
MSTVE+ +E + GR+L VN K P+ P F+++VGNL W
Sbjct: 191 MSTVEEAEKAVEMFHRYDVDGRLLTVN---KAAPRGARVERPPRQFGPSFRIYVGNLPWQ 247
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V L Q F E+G VV ARV+YD E+GRSRG+GFV +T+ E++ A+ +L+G L+GRA
Sbjct: 248 VDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRA 307
Query: 115 MRVSLAQGR 123
+RV++A+ R
Sbjct: 308 LRVNVAEER 316
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + + +E L Q F++ G V + V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 144 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 203
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ +++GR + V+ A R
Sbjct: 204 FHRYDVDGRLLTVNKAAPR 222
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 14/137 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE--------------TDFKL 46
MS+ E A + +G E GR LRVN P + + + + ++
Sbjct: 147 MSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMDSSNRV 206
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+WSV + L F E G VV A+V+YD +SGRSRG+GFV YS+ E+ A+ESL+
Sbjct: 207 YVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLD 266
Query: 107 GVELEGRAMRVSLAQGR 123
GV+L GRA+RVS A+ R
Sbjct: 267 GVDLGGRAIRVSPAEAR 283
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A D K+FVGNL +SV + +L + F+ G+V V+YD +GRSRG+GFV S+K +E
Sbjct: 95 ANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVE 154
Query: 100 TALESLNGVELEGRAMRVS 118
A + NG E++GRA+RV+
Sbjct: 155 AACQQFNGYEIDGRALRVN 173
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK----------LPLYAETDFKLFVGN 50
MS+ E+ A + +G E GR LRVN P+ + ++ +++VGN
Sbjct: 135 MSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGN 194
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
L+W V ++L F E G VV A+V+YD +SGRSRG+GFV YS+ E+ A+ESL+GV+L
Sbjct: 195 LAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDL 254
Query: 111 EGRAMRVSLAQGR 123
GRA+RVS A+ R
Sbjct: 255 NGRAIRVSPAEAR 267
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL +S + +L + F+ GNV V+YD +GRSRG+GFV S+K E+E A
Sbjct: 86 DLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 103 ESLNGVELEGRAMRVS 118
+ NG EL+GRA+RV+
Sbjct: 146 QQFNGYELDGRALRVN 161
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ ++ E GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 175 MSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPE-RPPRVFEPAFRMYVGNLPWDVD 233
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L Q F E+G VV ARV++D E+GRSRG+GFV S++ E+E A+ + +G L+GR +R
Sbjct: 234 SARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIR 293
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 294 VNVAEER 300
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + V +E L + F++ G V A V+Y+ E+ RSRG+GFV ST E E A++
Sbjct: 128 KVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDM 187
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ EL+GR + V+ A R
Sbjct: 188 FHRYELDGRLLTVNKAAPR 206
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD----FKLFVGNLSWSVT 56
MS+V++ A +E +G GR LRVN S P P+ P +++VGNLSW V
Sbjct: 131 MSSVQEVEAAVEQFNGYVLDGRSLRVN-SGPPPPRDPSSQRGPRGDANRVYVGNLSWGVD 189
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+L F E G V+ AR++YD ESGRSRG+GFV Y + E+E A+ +L+G +L+GR +R
Sbjct: 190 NSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIR 249
Query: 117 VSLAQGR 123
V++A+ +
Sbjct: 250 VTVAESK 256
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 82 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAV 141
Query: 103 ESLNGVELEGRAMRVS 118
E NG L+GR++RV+
Sbjct: 142 EQFNGYVLDGRSLRVN 157
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ ++ E GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 196 MSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPE-RPPRVFEPAFRMYVGNLPWDVD 254
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L Q F E+G VV ARV++D E+GRSRG+GFV S++ E+E A+ + +G L+GR +R
Sbjct: 255 SARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIR 314
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 315 VNVAEER 321
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + V +E L + F++ G V A V+Y+ E+ RSRG+GFV ST E E A++
Sbjct: 149 KVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDM 208
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+ EL+GR + V+ A R S
Sbjct: 209 FHRYELDGRLLTVNKAAPRGS 229
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 86/135 (63%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKLPL----YAETDFKLFV 48
M +V++ I DG + GR ++VNF + P+ PK+ + ++ +K++
Sbjct: 38 MGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYA 97
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW +T+E L AF ++ ++GA+V+Y+ ESGRSRG+GF+ +++ E+AL ++N V
Sbjct: 98 GNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMNEV 157
Query: 109 ELEGRAMRVSLAQGR 123
E+EGR +R++LA R
Sbjct: 158 EVEGRPLRLNLAAVR 172
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
+T+ L F E G+V+ ++YD + RSRG+ FV + E + A+ +G ++ GR
Sbjct: 1 MTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRT 60
Query: 115 MRVSLAQ 121
++V+ +
Sbjct: 61 VKVNFPE 67
>gi|356505441|ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 314
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL------------YAETDFKLFV 48
M VED I DG + GR ++VNF + PK L + ++ K++
Sbjct: 153 MGNVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKIRNSYRGFVDSPHKIYA 212
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T++ L +AF E V+ A+V+Y+ +SGRSRG+GFV + T + AL+ +NGV
Sbjct: 213 GNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESAQAALDIMNGV 272
Query: 109 ELEGRAMRVSLAQGR 123
E++GR +R++LA+ R
Sbjct: 273 EVQGRPLRLNLAEAR 287
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +S+T +L + F E G V ++YD + RSRG+ FV + + A+
Sbjct: 106 RLYVGNLPYSITNSALAELFGEAGTVASVEIMYDRVTDRSRGFAFVTMGNVEDAKEAIRM 165
Query: 105 LNGVELEGRAMRVSLAQ 121
+G ++ GR ++V+ +
Sbjct: 166 FDGSQVGGRTVKVNFPE 182
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LPLYAETDFKLFVGNLSWS 54
MSTVE+ +E + GR+L VN K P+ P F+++VGNL W
Sbjct: 55 MSTVEEAEKAVEMFHRYDVDGRLLTVN---KAAPRGARVERPPRQFGPSFRIYVGNLPWQ 111
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V L Q F E+G VV ARV+YD E+GRSRG+GFV +T+ E++ A+ +L+G L+GRA
Sbjct: 112 VDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRA 171
Query: 115 MRVSLAQGR 123
+RV++A+ R
Sbjct: 172 LRVNVAEER 180
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + + +E L Q F++ G V + V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 8 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 67
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ +++GR + V+ A R
Sbjct: 68 FHRYDVDGRLLTVNKAAPR 86
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 15/138 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPL----------YAETDFK 45
MS+ E+ A +E +G + GR LRVN P P+ P + ++ K
Sbjct: 125 MSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGNK 184
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+W V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +L
Sbjct: 185 VYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNL 244
Query: 106 NGVELEGRAMRVSLAQGR 123
+G++L+GR +RV++A+ +
Sbjct: 245 DGIDLDGRQIRVTVAESK 262
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E A+
Sbjct: 76 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAV 135
Query: 103 ESLNGVELEGRAMRVS 118
E NG +GR +RV+
Sbjct: 136 EQFNGYTFQGRPLRVN 151
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL------------YAETDFKLFV 48
M +VED I DG + GR ++VNF + PK L + ++ K++
Sbjct: 156 MGSVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKILNSYRGFVDSPHKIYA 215
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T++ L +AF E V+ A+V+Y+ +SGRSRG+GFV + T AL+ +NGV
Sbjct: 216 GNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDIMNGV 275
Query: 109 ELEGRAMRVSLAQGR 123
E++GR +R++LA+ R
Sbjct: 276 EVQGRPLRLNLAEAR 290
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +S+T L + F E G V ++YD + RSRG+ FV + + + A+
Sbjct: 109 RLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRM 168
Query: 105 LNGVELEGRAMRVSLAQ 121
+G ++ GR ++V+ +
Sbjct: 169 FDGSQVGGRTVKVNFPE 185
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLYAETDFKLFVGNLSWSVT 56
MST+E+ + IE L+ + GR+L VN + P+ + P F+ +VGNL W V
Sbjct: 1 MSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQFAPAFRAYVGNLPWQVD 59
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++ A+ +L+G EL+GR +R
Sbjct: 60 DSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLR 119
Query: 117 VSLAQGR 123
V++A R
Sbjct: 120 VNVAAER 126
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 81/137 (59%), Gaps = 14/137 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPLYA---------ETDFKL 46
M +VE+ A +E +G + GR LRVN P P+ P ++ KL
Sbjct: 135 MGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRAMGGGGGGGSFDSANKL 194
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNLSW V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +L+
Sbjct: 195 YVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISNLD 254
Query: 107 GVELEGRAMRVSLAQGR 123
GV+L+GR +RV++A+ +
Sbjct: 255 GVDLDGRQIRVTVAESK 271
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
Y+E D K+FVGNL ++V + L F++ G+V V+YD +GRSRG+GFV + E+
Sbjct: 83 YSE-DLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 141
Query: 99 ETALESLNGVELEGRAMRVS 118
A+E NG +GR +RV+
Sbjct: 142 AAAVEQFNGYTFQGRPLRVN 161
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 15/138 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLPL----------YAETDFK 45
MS+ E+ A +E +G + GR LRVN P P+ P + ++ K
Sbjct: 21 MSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGNK 80
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+W V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +L
Sbjct: 81 VYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNL 140
Query: 106 NGVELEGRAMRVSLAQGR 123
+G++L+GR +RV++A+ +
Sbjct: 141 DGIDLDGRQIRVTVAESK 158
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 75 VLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
V+YD +GRSRG+GFV S+ E A+E NG +GR +RV+
Sbjct: 4 VVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVN 47
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLYAETDFKLFVGNLSWSVT 56
MST+E+ + IE L+ + GR+L VN + P+ + P F+ +VGNL W V
Sbjct: 175 MSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQFAPAFRAYVGNLPWQVD 233
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++ A+ +L+G EL+GR +R
Sbjct: 234 DSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLR 293
Query: 117 VSLAQGR 123
V++A R
Sbjct: 294 VNVAAER 300
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 187
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LN ++ GR + V+ A R S
Sbjct: 188 LNRYDINGRLLNVNRAAPRGS 208
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLYAETDFKLFVGNLSWSVT 56
MST+E+ + IE L+ + GR+L VN + P+ + P F+ +VGNL W V
Sbjct: 176 MSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQFAPAFRAYVGNLPWQVD 234
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++ A+ +L+G EL+GR +R
Sbjct: 235 DSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLR 294
Query: 117 VSLAQGR 123
V++A R
Sbjct: 295 VNVAAER 301
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 188
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LN ++ GR + V+ A R S
Sbjct: 189 LNRYDINGRLLNVNRAAPRGS 209
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYA-ETDFKLFVGNLSWSVTT 57
MSTVE+ +E + + GR L VN + +P+ P A E F+++VGNL W V
Sbjct: 141 MSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDD 200
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV ARV+YD ++ RSRG+GFV S++ E+ A+ +L+G L+GRA+RV
Sbjct: 201 ARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRV 260
Query: 118 SLAQGR 123
++A+ R
Sbjct: 261 NVAEER 266
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + + +E L Q F E G V A V+Y+ E+ +SRG+GF+ ST E E A+E
Sbjct: 94 KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 153
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 154 FNRYDLNGRFLTVNKAAPRGS 174
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E L+G + GR+L VN + +P+ + P E +++VGNL W V
Sbjct: 176 MSTVEEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPE-RPPREFEPSCRVYVGNLPWDVD 234
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G V+ ARV+ D E+GRSRG+GFV ++++EM A+ +L+G L+GRA+R
Sbjct: 235 NARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAIR 294
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 295 VNVAEER 301
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V +E L Q F G V A V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 129 KLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 188
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LNG ++ GR + V+ A R S
Sbjct: 189 LNGFDMNGRLLTVNKAAPRGS 209
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E + + GR+L VN + ++P+ + P E ++++VGN+ W +
Sbjct: 184 MSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPE-RPPRTFEQSYRIYVGNIPWGID 242
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV +++AEM A+ +L+G L+GR +R
Sbjct: 243 DARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIR 302
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 303 VNVAEDR 309
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V +E L + F++ G V A V+Y+ ++ +SRG+GFV ST E E A+E
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196
Query: 105 LNGVELEGRAMRVSLAQGR 123
N ++ GR + V+ A R
Sbjct: 197 YNRYDVNGRLLTVNKAARR 215
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-----ETDFKLFVGNLSWSV 55
MSTVE+ + +E + + GR+L VN + + E+ ++VGNL W V
Sbjct: 157 MSTVEEAESAVEKFNRYDIDGRLLTVNKASPRGTRPERPPPRRSFESSLSIYVGNLPWDV 216
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
L Q F ++GNVV ARV+YD ESGRSRG+GFV S + EM A+ +L+G L+GRA+
Sbjct: 217 DNTRLKQIFSKHGNVVNARVVYDRESGRSRGFGFVTMSDETEMNDAVAALDGESLDGRAI 276
Query: 116 RVSLAQGR 123
+VS+A+ R
Sbjct: 277 KVSVAEDR 284
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V ++ L F++ G V A V+Y+ E+ +SRG+GFV ST E E+A+E
Sbjct: 110 KLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAESAVEK 169
Query: 105 LNGVELEGRAMRVSLA 120
N +++GR + V+ A
Sbjct: 170 FNRYDIDGRLLTVNKA 185
>gi|148908208|gb|ABR17219.1| unknown [Picea sitchensis]
Length = 296
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 14/126 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
MSTV + A IE L G + GR + VNF P L Y ET ++LF GNL
Sbjct: 150 MSTVIEAKAAIEKLQGSDLGGRDMIVNF-----PAAVLSRGNKTEDEYVETPYQLFAGNL 204
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+WSV E L F E+G V+GA+V+Y+ + G R +GFVC S+++EME A+ SLNG E
Sbjct: 205 AWSVKNEILRDLFSEHGTVLGAKVVYNSKGGVPRAFGFVCLSSQSEMEAAIVSLNGKEFH 264
Query: 112 GRAMRV 117
GR + V
Sbjct: 265 GRNLVV 270
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL S + LT FQE+G V A V+ + E+G SRG+ FV ST E + A+E
Sbjct: 103 KLYVGNLPRSCDSAQLTHLFQEFGTVESAEVVRNEETGLSRGFAFVTMSTVIEAKAAIEK 162
Query: 105 LNGVELEGRAMRVSL 119
L G +L GR M V+
Sbjct: 163 LQGSDLGGRDMIVNF 177
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK----PKLPLYAETDFKLFVGNLSWSVT 56
MST+E+ + IE L+ + GR+L VN + P+ + P F+ +VGNL W V
Sbjct: 64 MSTIEEADKAIEMLNRYDINGRLLNVNRA-APRGSRVERPPRQFAPAFRAYVGNLPWQVD 122
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV A V+YD ESGRSRG+GFV ++K E++ A+ +L+G EL+GR +R
Sbjct: 123 DSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLR 182
Query: 117 VSLAQGR 123
V++A R
Sbjct: 183 VNVAAER 189
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 17 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 76
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LN ++ GR + V+ A R S
Sbjct: 77 LNRYDINGRLLNVNRAAPRGS 97
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYA-ETDFKLFVGNLSWSVTT 57
MSTVE+ +E + + GR L VN + +P+ P A E F+++VGNL W V
Sbjct: 181 MSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDD 240
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV ARV+YD ++ RSRG+GFV S++ E+ A+ +L+G L+GRA+RV
Sbjct: 241 ARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRV 300
Query: 118 SLAQGR 123
++A+ R
Sbjct: 301 NVAEER 306
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + + +E L Q F E G V A V+Y+ E+ +SRG+GF+ ST E E A+E
Sbjct: 134 KLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEM 193
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 194 FNRYDLNGRFLTVNKAAPRGS 214
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LPLYAETDFKLFVGNLSWS 54
MST+E+ +E + GR+L VN K P+ P + + F+++VGNL W
Sbjct: 163 MSTIEEAEKAVEMFHRYDVNGRLLTVN---KAAPRGARVERPPRDSGSSFRIYVGNLPWQ 219
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V L + F E+G VV ARV+YD ++GRSRG+GFV +++ E++ A+ +L+G LEGRA
Sbjct: 220 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDAIAALDGQSLEGRA 279
Query: 115 MRVSLAQGR 123
+RV++A+ R
Sbjct: 280 LRVNVAEER 288
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 116 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 175
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ ++ GR + V+ A R
Sbjct: 176 FHRYDVNGRLLTVNKAAPR 194
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E L + GR L VN + +P+ + P +E ++++VGNL W V
Sbjct: 197 MSTVEESEKAVEMLHRYDLDGRFLTVNKAAPRGSRPE-RPPRVSEPGYRIYVGNLPWDVD 255
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L Q F E+G VV ARV++D E+ RSRG+GFV ST++E+ A+ +L+G L+GR +R
Sbjct: 256 SGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRPIR 315
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 316 VNVAEER 322
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + V +E L F++ G V A V+Y+ E+ SRG+GFV ST E E A+E
Sbjct: 150 KIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEM 209
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
L+ +L+GR + V+ A R S
Sbjct: 210 LHRYDLDGRFLTVNKAAPRGS 230
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 179 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 237
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 238 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 297
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 298 VNVAEER 304
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 132 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 191
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 192 FNRYDLNGRLLTVNKAAPRGS 212
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
gi|222868645|gb|EEF05776.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ + IE + GR+L VN + +P+ + P +E ++++VGNL W V
Sbjct: 164 MSTVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPE-RPPRVSEPSYRIYVGNLPWGVD 222
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L + F E+G VV A+V+ D E+GRSRG+GFV S+++E+ A+ +L+G EL+GRA+R
Sbjct: 223 SGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDAIAALDGQELDGRAIR 282
Query: 117 VSLAQGR 123
V++A R
Sbjct: 283 VNVAAER 289
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + VT+E L F + G V + V+Y+ E+ SRG+GFV ST E + A+E
Sbjct: 117 KIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRGFGFVTMSTVEESDKAIEM 176
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N L+GR + V+ A R S
Sbjct: 177 FNRYNLDGRLLTVNKAAPRGS 197
>gi|357160118|ref|XP_003578663.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 296
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 10/130 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPL--YAETDFKLFVGNLSW 53
MST+E+ +E + GR+L VN K P+ P + + F+++VGNL W
Sbjct: 165 MSTIEEAEKAVEMFHRYDVGGRLLTVN---KAAPRGARVERPARDFGGSSFRIYVGNLPW 221
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L Q F E+G VV ARV+YD E+GRSRG+GFV +++ E++ A+ +L+G LEGR
Sbjct: 222 QVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 281
Query: 114 AMRVSLAQGR 123
A+RV++A+ R
Sbjct: 282 ALRVNVAEER 291
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + + +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 118 KVYVGNLPYDIDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 177
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ ++ GR + V+ A R
Sbjct: 178 FHRYDVGGRLLTVNKAAPR 196
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 80/129 (62%), Gaps = 7/129 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETDF-KLFVGNLSWS 54
MS+VE+ ++ +G GR LRVN S P P+ P D +++VGNLSW
Sbjct: 129 MSSVEEVEVAVDQFNGYVLDGRSLRVN-SGPPPPRDRSSRSPQRPRGDANRVYVGNLSWG 187
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V +L F E G V+ AR++YD ESGRSRG+GFV Y + E+E A+ +L+G +L+GR
Sbjct: 188 VDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQ 247
Query: 115 MRVSLAQGR 123
+RV++A+ +
Sbjct: 248 IRVTVAESK 256
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 80 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAV 139
Query: 103 ESLNGVELEGRAMRVS 118
+ NG L+GR++RV+
Sbjct: 140 DQFNGYVLDGRSLRVN 155
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + ++ P F+ +VGNL W V
Sbjct: 162 MSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQVDD 221
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV A V+YD ESGRSRG+GFV +K E++ A+ +L+G EL+GR +RV
Sbjct: 222 SRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRV 281
Query: 118 SLAQGR 123
++A R
Sbjct: 282 NVAAER 287
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + + +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 115 KVYVGNLPYDIDSEGLAQLFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEM 174
Query: 105 LNGVELEGRAMRVSLAQGR 123
N ++ GR + V+ A R
Sbjct: 175 FNRYDISGRLLNVNRASPR 193
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LPLYAETDFKLFVGNLSWS 54
MST+E+ +E + GR+L VN K P+ P + + F+++VGNL W
Sbjct: 164 MSTIEEAEKAVEMFHRYDVNGRLLTVN---KAAPRGARVERPPRDSGSSFRIYVGNLPWQ 220
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V L + F E+G VV ARV+YD ++GRSRG+GFV +++ E++ A+ +L+G LEGRA
Sbjct: 221 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 280
Query: 115 MRVSLAQGR 123
+RV++A+ R
Sbjct: 281 LRVNVAEER 289
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ ++ GR + V+ A R
Sbjct: 177 FHRYDVNGRLLTVNKAAPR 195
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 198 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 256
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 257 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 316
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 317 VNVAEER 323
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGS 231
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 198 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 256
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 257 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 316
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 317 VNVAEER 323
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 211 FNRYDLNGRLLTVNKAAPRGS 231
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 173 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 231
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 232 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 291
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 292 VNVAEER 298
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 126 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 185
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 186 FNRYDLNGRLLTVNKAAPRGS 206
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 183 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 241
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 242 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 301
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 302 VNVAEER 308
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 136 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 195
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 196 FNRYDLNGRLLTVNKAAPRGS 216
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 184 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 242
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 243 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 302
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 303 VNVAEER 309
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL++ V +++L F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E
Sbjct: 137 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 196
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N +L GR + V+ A R S
Sbjct: 197 FNRYDLNGRLLTVNKAAPRGS 217
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 16/139 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK----------------LPLYAETDF 44
MS+ E+ A + +G E GR LRVN P+ + ++
Sbjct: 135 MSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSN 194
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+++VGNL+W V ++L F E G VV A+V+YD +SGRSRG+GFV YS+ E+ A+ES
Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+GV+L GRA+RVS A+ R
Sbjct: 255 LDGVDLNGRAIRVSPAEAR 273
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL +S + +L + F+ GNV V+YD +GRSRG+GFV S+K E+E A
Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 145
Query: 103 ESLNGVELEGRAMRVS 118
+ NG EL+GRA+RV+
Sbjct: 146 QQFNGYELDGRALRVN 161
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MS+V++ +E + + GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 31 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE-RAPRVYEPAFRVYVGNLPWDVD 89
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L+G LEGRA+R
Sbjct: 90 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 149
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 150 VNVAEER 156
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
F++ G V A V+Y+ E+ +SRG+GFV S+ E ETA+E N +L GR + V+ A R
Sbjct: 3 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPR 62
Query: 124 RS 125
S
Sbjct: 63 GS 64
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ ++ E GR+L VN + +P+ + P E F+++VGNL W V
Sbjct: 991 MSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPE-RPPRVFEPAFRMYVGNLPWDVD 1049
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L Q F E+G VV ARV++D E+GRSRG+GFV S++ E+E A+ + +G L+GR +R
Sbjct: 1050 SARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIR 1109
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 1110 VNVAEER 1116
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + V +E L + F++ G V A V+Y+ E+ RSRG+GFV ST E E A++
Sbjct: 944 KVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDM 1003
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+ EL+GR + V+ A R S
Sbjct: 1004 FHRYELDGRLLTVNKAAPRGS 1024
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ + +E + GR+L VN + +P+ + P + ++++VGN+ W +
Sbjct: 145 MSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPE-RAPRTFQPTYRIYVGNIPWDID 203
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G VV ARV++D ESGRSRG+GFV S++AEM A+ +L+G L+GR +R
Sbjct: 204 DARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIR 263
Query: 117 VSLAQGR 123
V+ A+ R
Sbjct: 264 VNAAEER 270
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL + + +E L Q FQ+ G V A V+Y+ E+ RSRG+GFV ST E + A+
Sbjct: 96 DAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAV 155
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
E + +L GR + V+ A R S
Sbjct: 156 ELYSQYDLNGRLLTVNKAAPRGS 178
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETDFKLFVGNLSWSV 55
MST+E+ ++ G E GR+L VN K PK P F+++VGNL W V
Sbjct: 170 MSTIEELEKAVKMFSGYELNGRVLTVN---KAAPKGAQPERPPRPPQSFRVYVGNLPWDV 226
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
L Q F E+G V ARV+YD E+GRSRG+GFV S++ +M A+ +L+G L+GRA+
Sbjct: 227 DNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAI 286
Query: 116 RVSLAQGR 123
RV++A R
Sbjct: 287 RVNVAAQR 294
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + +E L F++ G V A V+Y+ + RSRG+GFV ST E+E A++
Sbjct: 123 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 182
Query: 105 LNGVELEGRAMRVSLAQGR 123
+G EL GR + V+ A +
Sbjct: 183 FSGYELNGRVLTVNKAAPK 201
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + + ++ P + F+ +VGNL W
Sbjct: 153 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 212
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV A ++YD E+GRSRG+GFV ++K ++++A+ +L+G E++GR +RV
Sbjct: 213 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 272
Query: 118 SLAQGR 123
++A R
Sbjct: 273 NVAAER 278
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 106 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 165
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N ++ GR + V+ A R S
Sbjct: 166 FNRYDISGRLLNVNRAAQRGS 186
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETDFKLFVGNLSWSV 55
MST+E+ ++ G E GR+L VN K PK P F+++VGNL W V
Sbjct: 172 MSTIEELEKAVKMFSGYELNGRVLTVN---KAAPKGAQPERPPRPPQSFRVYVGNLPWDV 228
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
L Q F E+G V ARV+YD E+GRSRG+GFV S++ +M A+ +L+G L+GRA+
Sbjct: 229 DNSRLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAI 288
Query: 116 RVSLAQGR 123
RV++A R
Sbjct: 289 RVNVAAQR 296
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL + +E L F++ G V A V+Y+ + RSRG+GFV ST E+E A++
Sbjct: 125 KIFVGNLPFDFDSEKLASLFEQAGTVEVAEVIYNRATDRSRGFGFVTMSTIEELEKAVKM 184
Query: 105 LNGVELEGRAMRVSLAQGR 123
+G EL GR + V+ A +
Sbjct: 185 FSGYELNGRVLTVNKAAPK 203
>gi|449440612|ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 330
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD--------KPKPKLPLYAETDFKLFVGNLS 52
MSTVE+ ++ + + GR+L VN + +P+P P F+++VGNL
Sbjct: 200 MSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPT-----FRIYVGNLP 254
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W V L Q F E+G VV ARVLYD +SGRSRG+GFV + + M A+ +L+G L+G
Sbjct: 255 WDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDG 314
Query: 113 RAMRVSLAQGR 123
RA+RV++A+ R
Sbjct: 315 RAIRVNVAEER 325
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL + + +E L F++ G V A V+Y+ E+ RSRG+GFV ST E E A+
Sbjct: 151 DAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 210
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
++ N +L GR + V+ A R S
Sbjct: 211 DTFNRYDLSGRLLTVNKAAPRGS 233
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 85/135 (62%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKLPL----YAETDFKLFV 48
M +V++ I DG + GR ++VNF + P+ PK+ + ++ +K++
Sbjct: 294 MGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYA 353
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW +T+E L AF + ++GA+V+Y+ ESGRSRG+GF+ +++ E+AL ++B V
Sbjct: 354 GNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFLSFASAENAESALNAMBEV 413
Query: 109 ELEGRAMRVSLAQGR 123
E+EGR +R++LA R
Sbjct: 414 EVEGRPLRLNLAAVR 428
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
PK+ AE +L+VGNL +S+T+ L F E G+V+ ++YD + RSRG+ FV
Sbjct: 237 PKVSDSAEAS-RLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMG 295
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGRR 124
+ E + A+ +G ++ GR ++V+ + R
Sbjct: 296 SVQEAKEAIRMFDGSQVGGRTVKVNFPEVPR 326
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD--------KPKPKLPLYAETDFKLFVGNLS 52
MSTVE+ ++ + + GR+L VN + +P+P P F+++VGNL
Sbjct: 194 MSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPT-----FRIYVGNLP 248
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W V L Q F E+G VV ARVLYD +SGRSRG+GFV + + M A+ +L+G L+G
Sbjct: 249 WDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDG 308
Query: 113 RAMRVSLAQGR 123
RA+RV++A+ R
Sbjct: 309 RAIRVNVAEER 319
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL + + +E L F++ G V A V+Y+ E+ RSRG+GFV ST E E A+
Sbjct: 145 DAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 204
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
++ N +L GR + V+ A R S
Sbjct: 205 DTFNRYDLSGRLLTVNKAAPRGS 227
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAETDFKLFVGNLSWSVTTE 58
MSTV++ IE + GR L VN + +P+ P + ++++VGNL W V
Sbjct: 146 MSTVDEAEKAIEKFHRYDLNGRFLTVNKAAPRGSRPERPSVFKIAYRIYVGNLPWQVDDA 205
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
L Q F E+G VV ARV+ D E+GRSRG+GFV S++ E+ A+ +L+G L+GRA+ V+
Sbjct: 206 RLEQVFSEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAITVN 265
Query: 119 LAQGR 123
+AQ R
Sbjct: 266 IAQER 270
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL + V +E+L Q F + G V A ++Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 99 KLYVGNLPYDVNSENLAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEK 158
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+ +L GR + V+ A R S
Sbjct: 159 FHRYDLNGRFLTVNKAAPRGS 179
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 23/146 (15%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----------------------PKLP 37
MSTVE+ A + +G E GR LRVN P P+
Sbjct: 138 MSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGG 197
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ +++VGNLSW V +L F E G V ARV+YD E+GRSRG+GFV Y++ E
Sbjct: 198 ANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEE 257
Query: 98 METALESLNGVELEGRAMRVSLAQGR 123
+ A+ESL+GV+L GR++RV++A+ R
Sbjct: 258 VNRAIESLDGVDLNGRSIRVTMAEAR 283
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 28 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 87
SD+ +P D KLFVGNL ++V + L F++ GNV V+YD +GRSRG+
Sbjct: 78 LSDEGEPSF----SPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGF 133
Query: 88 GFVCYSTKAEMETALESLNGVELEGRAMRVS 118
GFV ST E+E A + NG ELEGR +RV+
Sbjct: 134 GFVTMSTVEEVEAAAQQFNGYELEGRQLRVN 164
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + + ++ P + F+ +VGNL W
Sbjct: 153 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRRFASSFRAYVGNLPWQAED 212
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV A ++YD E+GRSRG+GFV ++K ++++A+ +L+G E++GR +RV
Sbjct: 213 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 272
Query: 118 SLAQGR 123
++A R
Sbjct: 273 NVAAER 278
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 106 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 165
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N ++ GR + V+ A R S
Sbjct: 166 FNRYDISGRLLNVNRAAQRGS 186
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF----KLFVGNLSWSVT 56
MSTVE+ +E L+G + GR L VN + P+ DF +++VGNL W V
Sbjct: 96 MSTVEEAEKAVELLNGYDMDGRQLTVNKA-APRGSPERAPRGDFEPSCRVYVGNLPWDVD 154
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
T L Q F E+G VV ARV+ D E+GRSRG+GFV S+++E+ A+ +L+G L+GRA+R
Sbjct: 155 TSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVR 214
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 215 VNVAEER 221
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V +E L F G V A V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 49 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 108
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LNG +++GR + V+ A R S
Sbjct: 109 LNGYDMDGRQLTVNKAAPRGS 129
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK------LPLYAETDFKLFVGNLSWS 54
MST+E+ +E + GR+L VN K P+ P + + F+++VGNL W
Sbjct: 164 MSTIEEAEKAVEMFHRYDVNGRLLTVN---KAAPRGARVERPPRDSGSSFRIYVGNLPWQ 220
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V L + F E+G VV A+V+YD ++GRSRG+GFV +++ E++ A+ +L+G LEGRA
Sbjct: 221 VDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 280
Query: 115 MRVSLAQGR 123
+RV++A+ R
Sbjct: 281 LRVNVAEER 289
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F++ G V + V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 117 KVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVEM 176
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ ++ GR + V+ A R
Sbjct: 177 FHRYDVNGRLLTVNKAAPR 195
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + ++ P F+ +VGNL W
Sbjct: 159 MSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQADD 218
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F EYG VV A V+YD E+GRSRG+GFV +K E++ A+ +L+G EL+GR +RV
Sbjct: 219 SRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRV 278
Query: 118 SLAQGR 123
++A R
Sbjct: 279 NVAAER 284
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + + +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 112 KVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMSTIEEADKAIEM 171
Query: 105 LNGVELEGRAMRVSLAQGR 123
N ++ GR + V+ A R
Sbjct: 172 FNRYDISGRLLNVNRASPR 190
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF----KLFVGNLSWSVT 56
MSTVE+ +E L+G + GR L VN + P+ DF +++VGNL W V
Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQLTVNKA-APRGSPERAPRGDFEPSCRVYVGNLPWDVD 161
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
T L Q F E+G VV ARV+ D E+GRSRG+GFV S+++E+ A+ +L+G L+GRA+R
Sbjct: 162 TSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVR 221
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 222 VNVAEER 228
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V +E L F G V A V+Y+ E+ RSRG+GFV ST E E A+E
Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LNG +++GR + V+ A R S
Sbjct: 116 LNGYDMDGRQLTVNKAAPRGS 136
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 12/134 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK---------LPLYAETDFKLFVGNL 51
MST+E+ +E G E GR+L VN K PK P + +++VGNL
Sbjct: 165 MSTLEELKKAVEMFSGYELNGRVLTVN---KAAPKGAQPERPPRPPRSFSSGLRVYVGNL 221
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
W V L Q F E+G V ARV+YD E+GRSRG+GFV S++ +M A+ +L+G L+
Sbjct: 222 PWEVDDARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLD 281
Query: 112 GRAMRVSLAQGRRS 125
GRA+RV++AQ R S
Sbjct: 282 GRAIRVNVAQDRPS 295
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE D K+FVGNL + + +E+L F + G V A V+Y+ + RSRG+GFV ST E++
Sbjct: 114 AEED-KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELK 172
Query: 100 TALESLNGVELEGRAMRVSLAQGR 123
A+E +G EL GR + V+ A +
Sbjct: 173 KAVEMFSGYELNGRVLTVNKAAPK 196
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 11/130 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ +E + GR+L VN + D+P P + +++VGNL W
Sbjct: 173 MSTVEEAEKAVEMFHRYDVNGRLLTVNKAAPRGSRVDRP----PRQSGPSLRIYVGNLPW 228
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L + F E+G VV ARV+YD E+GRSRG+GFV +++ E++ A+ +L+G L+GR
Sbjct: 229 QVDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQDELDDAIAALDGQSLDGR 288
Query: 114 AMRVSLAQGR 123
A+RV++A+ R
Sbjct: 289 ALRVNVAEER 298
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ E+ +SRG+GFV ST E E A+E
Sbjct: 126 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEM 185
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+ ++ GR + V+ A R S
Sbjct: 186 FHRYDVNGRLLTVNKAAPRGS 206
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + ++ P F+ +VGNL W
Sbjct: 159 MSTIEEADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQADD 218
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F EYG VV A V+YD E+GRSRG+GFV +K E++ A+ +L+G EL+GR +RV
Sbjct: 219 SRLVQLFSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRV 278
Query: 118 SLAQGR 123
++A R
Sbjct: 279 NVAAER 284
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + + +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 112 KVYVGNLPYDIESEGLAQLFDQAGVVEVAEVIYNKETGQSRGFGFVTMSTIEEADKAIEM 171
Query: 105 LNGVELEGRAMRVSLAQGR 123
N ++ GR + V+ A R
Sbjct: 172 FNRYDISGRLLNVNRASPR 190
>gi|449440111|ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 82/136 (60%), Gaps = 17/136 (12%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-------------LF 47
MSTV + A + +G E GR+LRVN+ P P ++ F+ +
Sbjct: 141 MSTVGEVEAAAQQFNGYELDGRLLRVNYGPPP----PKRDDSSFRGSRNASRFDNRNRVH 196
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
V NL+W V +L F+E GNV+ A+V+YD +SG+SRG+GFV Y++ E+ A++SL+G
Sbjct: 197 VSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDG 256
Query: 108 VELEGRAMRVSLAQGR 123
V+L+GR +RV+ A+ R
Sbjct: 257 VDLDGRPIRVTQAEAR 272
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL ++V + L F+ G V V+YD +GRSRG+GFV ST E+E A
Sbjct: 92 DLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAA 151
Query: 103 ESLNGVELEGRAMRVS 118
+ NG EL+GR +RV+
Sbjct: 152 QQFNGYELDGRLLRVN 167
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 82/128 (64%), Gaps = 8/128 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL--------PLYAETDFKLFVGNLS 52
MSTVE+ NA +E L+G E GR ++VN ++ P + P++ ++ +K++VGNL+
Sbjct: 115 MSTVEEANAAVEALNGTEVGGRKIKVNVTESFLPNIDRSAPESEPVFVDSQYKVYVGNLA 174
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+VTTE L F E G ++ A V + + +S+GYGFV +S++ E+E A+ + N ELEG
Sbjct: 175 KNVTTEVLKNFFSEKGKILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELEG 234
Query: 113 RAMRVSLA 120
+ +RV+ A
Sbjct: 235 QPIRVNRA 242
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +VT + L F +G V A V+YD + RSR +GFV ST E A+E+
Sbjct: 68 KLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEEANAAVEA 127
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 128 LNGTEVGGRKIKVNVTE 144
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + GR+L VN + + ++ P + F+ +VGNL W
Sbjct: 153 MSTIEEADKAIETFNRYNISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 212
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV A ++YD E+GRSRG+GFV ++K ++++A+ +L+G E++GR +RV
Sbjct: 213 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 272
Query: 118 SLAQGR 123
++A R
Sbjct: 273 NVAAER 278
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 106 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADKAIET 165
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N + GR + V+ A R S
Sbjct: 166 FNRYNISGRLLNVNRAAQRGS 186
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL--PLYA-ETDFKLFVGNLSWSVTT 57
M TVE+ +E + GR+L VN + K+ P A + K++VGNL W
Sbjct: 161 MGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKIYVGNLPWQADD 220
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
SL Q F E+G V+ ARV+YD E+GRSRG+GFV YS+++E+ A+ +L+G +++GR +RV
Sbjct: 221 NSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRV 280
Query: 118 SLAQGRR 124
++A+ RR
Sbjct: 281 NIAEDRR 287
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL +++ + L + F+ G V+ ++ D E+G SRG+GFV T E E +E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 105 LNGVELEGRAMRVSLAQGR 123
N LEGR + V+ A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL--PLYA-ETDFKLFVGNLSWSVTT 57
M TVE+ +E + GR+L VN + K+ P A + K++VGNL W
Sbjct: 161 MGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKVERPSQAGSSTNKIYVGNLPWQADD 220
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
SL Q F E+G V+ ARV+YD E+GRSRG+GFV YS+++E+ A+ +L+G +++GR +RV
Sbjct: 221 NSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDAIAALDGTDMDGRPLRV 280
Query: 118 SLAQGRR 124
++A+ RR
Sbjct: 281 NIAEDRR 287
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL +++ + L + F+ G V+ ++ D E+G SRG+GFV T E E +E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 105 LNGVELEGRAMRVSLAQGR 123
N LEGR + V+ A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 12/134 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------LFVG 49
MST ED + G E GR+L VN + PK P F ++VG
Sbjct: 168 MSTAEDLEKALNKFSGYELDGRVLTVNKA-TPKEARPERPPRTFGSGSGSRDSGLSVYVG 226
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NL WSV L + F+E+GNV AR++ D E+GRSRG+GFV S++A++ A+ +L+G
Sbjct: 227 NLPWSVDAARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADINGAIAALDGQS 286
Query: 110 LEGRAMRVSLAQGR 123
L+GR +RVS+A+GR
Sbjct: 287 LDGRTIRVSVAEGR 300
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL W V +E+L F+E G+V A V+Y+ + +SRG+GFV ST ++E AL
Sbjct: 119 DLKIFVGNLPWDVESENLAMLFEEAGSVEFAEVIYNKATNQSRGFGFVIMSTAEDLEKAL 178
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
+G EL+GR + V+ A + +
Sbjct: 179 NKFSGYELDGRVLTVNKATPKEA 201
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 11/130 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ + IE + + GR+L VN + ++P+ + F+ +VGNL W
Sbjct: 156 MSTVEEADKAIEMFNRYDISGRLLNVNRASSRGTRMERPQRQF----APAFRAYVGNLPW 211
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L Q F E+G VV A+V+YD E+GRSRG+GFV +K E+ A+ +L+G EL+GR
Sbjct: 212 QVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGR 271
Query: 114 AMRVSLAQGR 123
+RV++A R
Sbjct: 272 PLRVNVAAER 281
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 105 LNGVELEGRAMRVSLAQGR 123
N ++ GR + V+ A R
Sbjct: 169 FNRYDISGRLLNVNRASSR 187
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + + ++ P + F+ +VGNL W
Sbjct: 156 MSTIEEADKAIEMFNRYDISGRLLNVNRAAQRGSRVERPPRQFASAFRAYVGNLPWQAED 215
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G V+ A V+YD E+GRSRG+GFV ++K E++ A+ +L+G EL+GR +RV
Sbjct: 216 SRLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELDDAISALDGQELDGRPLRV 275
Query: 118 SLAQGR 123
++A R
Sbjct: 276 NVAAER 281
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIEM 168
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N ++ GR + V+ A R S
Sbjct: 169 FNRYDISGRLLNVNRAAQRGS 189
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E E GR L VN + +P+ + P E F+++VGNL W V
Sbjct: 159 MSTVEEAEKAVELYHKFEVNGRFLTVNKAAPRGSRPE-RAPREYEPSFRVYVGNLPWDVD 217
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L Q F E+G V+ ARV+ D E+GRSRG+ FV ++++EM A+ +L+G LEGRA+R
Sbjct: 218 DARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIGALDGQTLEGRAIR 277
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 278 VNVAEER 284
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL + V +E L Q F+ G V A V+Y+ E+ RSRG+GFV ST E E A+
Sbjct: 110 DAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAV 169
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
E + E+ GR + V+ A R S
Sbjct: 170 ELYHKFEVNGRFLTVNKAAPRGS 192
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 29/152 (19%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----------------------- 37
MST E+ A + +G E GR +RVN P +
Sbjct: 135 MSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSF 194
Query: 38 ------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
++ +++VGNLSW V +L + F E GNVV A+V+YD +SGRSRG+GFV
Sbjct: 195 GGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVT 254
Query: 92 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
YS+ E+ A++SLNGV+L+GR++RVS A+ R
Sbjct: 255 YSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P ++E D KLFVGNL +SV + +L F+ GNV V+YD +GRSRG+GFV STK
Sbjct: 81 PRFSE-DLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139
Query: 97 EMETALESLNGVELEGRAMRVS 118
E+E A + NG E++GRA+RV+
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVN 161
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 11/130 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ + IE + GR+L VN + ++P+ + F+ +VGNL W
Sbjct: 156 MSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQF----APAFRAYVGNLPW 211
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L Q F E+G VV A+V+YD E+GRSRG+GFV +K E+ A+ +L+G EL+GR
Sbjct: 212 QVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGR 271
Query: 114 AMRVSLAQGR 123
+RV++A R
Sbjct: 272 PLRVNVAAER 281
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ ++ GR + V+ A R
Sbjct: 169 FSRYDISGRLLNVNRASSR 187
>gi|356525630|ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPL-------YAETDFKLFVGNL 51
M TVED AVIE L+G E GR ++VN ++KP P LPL + ++ K++VGNL
Sbjct: 118 MKTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPHKVYVGNL 177
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +VTT++L F E G V+ A+V + +S GYGFV +S++ ++E A+ S N LE
Sbjct: 178 AKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLE 237
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 238 GQTIRVNKA 246
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ +VT E L + QE+G V A V+YD SGRSR + FV T + +E
Sbjct: 71 RLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 131 LNGTEIGGREVKVNVTE 147
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 80/132 (60%), Gaps = 12/132 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M +VE+ I DG + GR ++VNF + P+ + ++ KL+V
Sbjct: 157 MGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYV 216
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
NLSW++T++ L AF + + A+V+YD SGRSRG+GF+ +S+ M++AL+++N V
Sbjct: 217 ANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEV 276
Query: 109 ELEGRAMRVSLA 120
ELEGR +R+++A
Sbjct: 277 ELEGRPLRLNVA 288
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +S+T+ L++ F E G V ++YD + RSRG+ FV + E + A+
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 169
Query: 105 LNGVELEGRAMRVSLAQGRR 124
+G ++ GR ++V+ + R
Sbjct: 170 FDGSQVGGRTVKVNFPEVPR 189
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 11/130 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ + IE + GR+L VN + ++P+ + F+ +VGNL W
Sbjct: 1 MSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQFA----PAFRAYVGNLPW 56
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V L Q F E+G VV A+V+YD E+GRSRG+GFV +K E+ A+ +L+G EL+GR
Sbjct: 57 QVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGR 116
Query: 114 AMRVSLAQGR 123
+RV++A R
Sbjct: 117 PLRVNVAAER 126
>gi|414883566|tpg|DAA59580.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 277
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 18/134 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET-------------DFKLF 47
M+T E+ I+ DG GR RVN+ P++P E +K++
Sbjct: 96 MATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERRTVTMSGRRRDDGTYKIY 150
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV +ST + + ALESL+G
Sbjct: 151 AGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDG 210
Query: 108 VELEGRAMRVSLAQ 121
VELEGR++R+SLA+
Sbjct: 211 VELEGRSLRLSLAE 224
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 75 VLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
++YD + RSRG+ FV +T E A++ +G L GR RV+ +
Sbjct: 79 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPE 125
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 29/152 (19%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP----------------------- 37
MST E+ A + +G E GR +RVN P +
Sbjct: 136 MSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSF 195
Query: 38 ------LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
++ +++VGNLSW V +L + F E GNVV A+V+YD +SGRSRG+GFV
Sbjct: 196 GGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVT 255
Query: 92 YSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
YS+ E+ A++SLNG++L+GR++RVS A+ R
Sbjct: 256 YSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P ++E D KLFVGNL +SV + +L F+ GNV V+YD SGRSRG+GFV STK
Sbjct: 82 PRFSE-DLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140
Query: 97 EMETALESLNGVELEGRAMRVS 118
E+E A + NG E++GRA+RV+
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVN 162
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 18/137 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL-------------YAETDFKLF 47
M VED I DG GR ++VNF P++P+ Y ++ K++
Sbjct: 156 MGNVEDAEEAIRMFDGTTVGGRAIKVNF-----PEVPIVGKRVQMGSTYRGYVDSPHKIY 210
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W +T++ L +AF + ++ A+V+Y+ +G+SRGYGFV + T ++E AL ++NG
Sbjct: 211 AGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNG 270
Query: 108 VELEGRAMRVSLAQGRR 124
VE++GR +R+ LA R
Sbjct: 271 VEVQGRPLRLKLAVDNR 287
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+LFVGNL +S+++ L Q F E GNVV +LYD + RSRG+ FV + E A+
Sbjct: 109 RLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDAEEAIRM 168
Query: 105 LNGVELEGRAMRVSLAQ 121
+G + GRA++V+ +
Sbjct: 169 FDGTTVGGRAIKVNFPE 185
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 18/134 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET-------------DFKLF 47
M+T E+ I+ DG GR RVN+ P++P E +K++
Sbjct: 160 MATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERRTVTMSGRRRDDGTYKIY 214
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV +ST + + ALESL+G
Sbjct: 215 AGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDG 274
Query: 108 VELEGRAMRVSLAQ 121
VELEGR++R+SLA+
Sbjct: 275 VELEGRSLRLSLAE 288
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV +T
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAE 164
Query: 97 EMETALESLNGVELEGRAMRVSLAQ 121
E A++ +G L GR RV+ +
Sbjct: 165 EAAKAIQMFDGALLGGRTARVNYPE 189
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK---PKPKLPLYAETDFKLFVGNLSWSVTT 57
MST E+ + G E GR+L VN + P+ + P + + +VGNL W V
Sbjct: 170 MSTSEEVERAVNKFSGFELDGRLLTVNNAAPRGTPRLRQPRTFNSGLRAYVGNLPWDVDN 229
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
SL Q F E+G V A+V+YD E+GR RG+GFV S +AEM A+ +L+G GRA+RV
Sbjct: 230 SSLEQLFSEHGKVESAQVVYDRETGRLRGFGFVTMSNEAEMNDAIAALDGQSFNGRAIRV 289
Query: 118 SLAQGR 123
++A+ R
Sbjct: 290 NVAEER 295
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL + V +E L Q F++ G V A V+Y+ ++ RSRG+GFV ST E+E A+
Sbjct: 121 DLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAV 180
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
+G EL+GR + V+ A R
Sbjct: 181 NKFSGFELDGRLLTVNNAAPR 201
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 12/132 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M +VE+ I DG + GR ++VNF + P+ + ++ KL+V
Sbjct: 162 MGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYV 221
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
NLSW++T++ L AF + + A+V+YD SGRSRG+GF+ +S+ M +AL+++N V
Sbjct: 222 ANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEV 281
Query: 109 ELEGRAMRVSLA 120
ELEGR +R+++A
Sbjct: 282 ELEGRPLRLNVA 293
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +S+T+ L++ F E G V ++YD + RSRG+ FV + E + A+
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174
Query: 105 LNGVELEGRAMRVSLAQGRR 124
+G ++ GR ++V+ + R
Sbjct: 175 FDGSQVGGRTVKVNFPEVPR 194
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL---PLYAETDFKLFVGNLSWSVTT 57
MST+E+ + IE + + GR+L VN + + ++ P + F+ +VGNL W
Sbjct: 51 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 110
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
L Q F E+G VV A V+YD E+GRSRG+GFV ++K ++++A+ +L+G E++GR +RV
Sbjct: 111 SRLVQLFSEHGEVVNATVVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 170
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ ESG+SRG+GFV ST E + A+E+
Sbjct: 4 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 63
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N ++ GR + V+ A R S
Sbjct: 64 FNRYDISGRLLNVNRAAQRGS 84
>gi|357440095|ref|XP_003590325.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479373|gb|AES60576.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 156
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 18/137 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL-------------YAETDFKLF 47
M VED I DG GR ++VNF P++P+ Y ++ K++
Sbjct: 1 MGNVEDAEEAIRMFDGTTVGGRAIKVNF-----PEVPIVGKRVQMGSTYRGYVDSPHKIY 55
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W +T++ L +AF + ++ A+V+Y+ +G+SRGYGFV + T ++E AL ++NG
Sbjct: 56 AGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNG 115
Query: 108 VELEGRAMRVSLAQGRR 124
VE++GR +R+ LA R
Sbjct: 116 VEVQGRPLRLKLAVDNR 132
>gi|296089011|emb|CBI38714.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD------------KPKPKLPLYAETDFKLFV 48
MS++ + A I LDG + GR +RV FS P L E+ +KL+V
Sbjct: 30 MSSMREAKAAIAALDGSDVGGREMRVRFSTDMNFRRRNSEALNSAPMRNLIFESPYKLYV 89
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL+W++ E L F ++G VV ARV++D ++G+ R YGF+ +S+ AE E A+ SLNG
Sbjct: 90 GNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHRAYGFLSFSSAAECEAAM-SLNGK 148
Query: 109 ELEGRAMRVSLAQGR 123
E GR++ VS R
Sbjct: 149 EFRGRSLVVSAGMKR 163
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F+ +G V V + E+G SRG G+V S+ E + A+ +L+G ++ GR MRV +
Sbjct: 2 FKPHGTVQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFS 58
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
gi|7578881|gb|AAF64167.1|AF240462_1 plastid-specific ribosomal protein 2 precursor [Spinacia oleracea]
Length = 260
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
M TVED NAVIE L+ E GR ++VN ++KP + + + E+ +K+++GNL
Sbjct: 132 MKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNL 191
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +VT E L F E G V+GA+V + +S G+GFV +S++ E+E A+++LN LE
Sbjct: 192 AKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLE 251
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 252 GQKIRVNKA 260
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ ++ + L +E+G + A V+YD SGRSR +GFV T + +E
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144
Query: 105 LNGVELEGRAMRVSLAQ 121
LN E+ GR ++V++ +
Sbjct: 145 LNDTEIGGRKIKVNITE 161
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 18/134 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET-------------DFKLF 47
M+T E+ I+ DG GR RVN+ P++P E +K++
Sbjct: 160 MATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERRTVTMSGRRRDDGTYKIY 214
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV +ST + + ALESL+G
Sbjct: 215 AGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDG 274
Query: 108 VELEGRAMRVSLAQ 121
VELEGR +R+SLA+
Sbjct: 275 VELEGRPLRLSLAE 288
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV +T
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAE 164
Query: 97 EMETALESLNGVELEGRAMRVSLAQ 121
E A++ +G L GR RV+ +
Sbjct: 165 EAAKAIQMFDGALLGGRTARVNYPE 189
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----DKPKPKLPLYAETDFKLFVGNLSWSVT 56
MSTVE+ +E + E GR L VN + +P+ + P + F+++VGNL W V
Sbjct: 161 MSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE-RQPRVYDAAFRIYVGNLPWDVD 219
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L + F E+G VV ARV+ D E+GRSRG+GFV S + E+ A+ +L+G LEGRA++
Sbjct: 220 SGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIK 279
Query: 117 VSLAQGR 123
V++A+ R
Sbjct: 280 VNVAEER 286
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL + V +++L F++ G V + V+Y+ ++ +SRG+GFV ST E E A+E
Sbjct: 114 KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEK 173
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
N E+ GR + V+ A R S
Sbjct: 174 FNSFEVNGRRLTVNRAAPRGS 194
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETDFKLFVGNLSWSV 55
MS+VE+ A +E +G GR LRVN S P P+ E + +++VGNLSW V
Sbjct: 134 MSSVEEVEAAVEQFNGYILDGRSLRVN-SGPPPPREQSSQRAPRGEAN-RVYVGNLSWGV 191
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
+L F G V+ A+V+YD ESGRSRG+GFV Y + E+E A+ +L+G +++GR +
Sbjct: 192 DNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQI 251
Query: 116 RVSLAQGR 123
RV++A+ +
Sbjct: 252 RVTVAESK 259
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 85 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAV 144
Query: 103 ESLNGVELEGRAMRVS 118
E NG L+GR++RV+
Sbjct: 145 EQFNGYILDGRSLRVN 160
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETDFKLFVGNLSWSV 55
MS+VE+ A +E +G GR LRVN S P P+ E + +++VGNLSW V
Sbjct: 134 MSSVEEVEAAVEQFNGYILDGRSLRVN-SGPPPPREQSSRRAPRGEAN-RVYVGNLSWGV 191
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
+L F G V+ A+V+YD ESGRSRG+GFV Y + E+E A+ +L+G +++GR +
Sbjct: 192 DNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQI 251
Query: 116 RVSLAQGR 123
RV++A+ +
Sbjct: 252 RVTVAESK 259
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 85 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAV 144
Query: 103 ESLNGVELEGRAMRVS 118
E NG L+GR++RV+
Sbjct: 145 EQFNGYILDGRSLRVN 160
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 16/139 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPLY-------------AETDFK 45
MS+VE+ A + +G E GR LRVN P P + ++++ +
Sbjct: 137 MSSVEEAEAAAKQFNGYELDGRSLRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENR 196
Query: 46 LFVGNLSWSVTTESLTQAFQEYGN-VVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+ VGNL+W V +L F+E G V+ ARV+YD ESGRSRG+GFV + + E+++A++S
Sbjct: 197 VHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRSRGFGFVTFGSPDEVKSAIQS 256
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+GV+L GRA+RVSLA +
Sbjct: 257 LDGVDLNGRAIRVSLADSK 275
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL +SV + L + F+ GNV V+YD +GRSRG+GFV S+ E E A
Sbjct: 88 DLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAA 147
Query: 103 ESLNGVELEGRAMRV 117
+ NG EL+GR++RV
Sbjct: 148 KQFNGYELDGRSLRV 162
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 82/135 (60%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M T+E+ I+ + + GR ++VN + P+ Y ++ K++
Sbjct: 165 MGTIEEAKEAIQMFNSSQIGGRTVKVNLPEVPRGGEREVMRTKIRDNNRSYVDSPHKIYA 224
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W++T++ L AF + V+GA+V+Y+ +GRSRG+GF+ + + ++++AL ++NGV
Sbjct: 225 GNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEDVQSALATMNGV 284
Query: 109 ELEGRAMRVSLAQGR 123
E+EGRA+R++LA R
Sbjct: 285 EVEGRALRLNLASER 299
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +++T+ L+Q F E GNVV +++YD + RSRG+GFV T E + A++
Sbjct: 118 RLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQM 177
Query: 105 LNGVELEGRAMRVSLAQGRR 124
N ++ GR ++V+L + R
Sbjct: 178 FNSSQIGGRTVKVNLPEVPR 197
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 12/132 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK---------LPLYAETDFKLFVGNL 51
MSTVE+ A + +Y GR L VN K P+ P E +++VGNL
Sbjct: 157 MSTVEEAEAGAAKFNRYDYNGRPLTVN---KAAPRGSRPEREERPPRTFEPVLRVYVGNL 213
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
SW + L Q F E+G VV ARV+YD E+GRSRG+GFV S + EM A+ +L+G LE
Sbjct: 214 SWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAALDGQILE 273
Query: 112 GRAMRVSLAQGR 123
GR ++VS+A+ R
Sbjct: 274 GRTIKVSVAEDR 285
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL + V +E L F+ G V A V+Y+ E+ +SRG+GFV ST E E
Sbjct: 108 DAKLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGA 167
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
N + GR + V+ A R S
Sbjct: 168 AKFNRYDYNGRPLTVNKAAPRGS 190
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 13/133 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------------PKLPLYAETDFKLF 47
M+T E+ ++ +G GR +RVNF + P+ L + + +K++
Sbjct: 156 MATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVY 215
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L AF+ +VGARV+++ ++GRSRG+GFV + T + + AL++++G
Sbjct: 216 AGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDG 275
Query: 108 VELEGRAMRVSLA 120
VEL+GR +R+SLA
Sbjct: 276 VELDGRPLRLSLA 288
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 32 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
P P + +++VGNL ++ T LT AF E G+V +++YD + RSRG+ FV
Sbjct: 96 PPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVT 155
Query: 92 YSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+T E A++ NG L GR +RV+ +
Sbjct: 156 MATAEEAAKAVQMFNGALLGGRTVRVNFPE 185
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 36 LPLYAETD-FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
LP+ A+ D ++ FVGNLSWS T ESL AF +YG V A+V+ D SGRSRG+ FV +
Sbjct: 34 LPVMADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDE 93
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQ 121
K ME A+E +NG++LEGRA+ V AQ
Sbjct: 94 KKAMEEAIEDMNGLDLEGRAITVDKAQ 120
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 32/150 (21%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF---------------- 44
MS+V + A +G E GR LRVN + P PK E F
Sbjct: 139 MSSVSEVEAAANQFNGYELDGRPLRVN-AGPPPPK----REDGFSRGPRSSFGSSGSGYG 193
Query: 45 -----------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
+++VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV Y+
Sbjct: 194 GGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYN 253
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ E++ A+ SLNG +L+GR +RVS A+ R
Sbjct: 254 SSQEVQNAINSLNGADLDGRQIRVSEAEAR 283
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 28 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 87
F+D P+ ++ D KLFVGNL ++V + L Q F+ GNV V+YD +GRSRG+
Sbjct: 76 FADDAAPQQQSFS-ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGF 134
Query: 88 GFVCYSTKAEMETALESLNGVELEGRAMRVS 118
GFV S+ +E+E A NG EL+GR +RV+
Sbjct: 135 GFVTMSSVSEVEAAANQFNGYELDGRPLRVN 165
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 13/133 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-------------PKLPLYAETDFKLF 47
M+T E+ ++ +G GR +RVNF + P+ L + + +K++
Sbjct: 156 MATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVY 215
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L AF+ +VGARV+++ ++GRSRG+GFV + T + + AL++++G
Sbjct: 216 AGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDG 275
Query: 108 VELEGRAMRVSLA 120
VEL+GR +R+SLA
Sbjct: 276 VELDGRPLRLSLA 288
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 32 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
P P + +++VGNL ++ T LT AF E G+V +++YD + RSRG+ FV
Sbjct: 96 PPRNRPALGQEPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVT 155
Query: 92 YSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+T E A++ NG L GR +RV+ +
Sbjct: 156 MATAEEAAKAVQMFNGALLGGRTVRVNFPE 185
>gi|118489861|gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK----PKPKLP------LYAETDFKLFVGN 50
M+T E+ A I+ + E GRI+RV F+ + P P+LP ET KL++ N
Sbjct: 141 MTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISN 200
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
L+W V L + F N V +RV++DG +GRS GYGFV ++T+ E A+ + +G EL
Sbjct: 201 LAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKEL 260
Query: 111 EGRAMRVSLAQGR 123
GR +R+ ++ +
Sbjct: 261 MGRPIRLKFSEDK 273
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV NL WS + + F + G V ++ ++GRSRG+ FV +T E + A++
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 105 LNGVELEGRAMRVSLAQGRR 124
N +E+ GR +RV A+ R
Sbjct: 154 FNSLEVSGRIIRVEFAKRLR 173
>gi|224138144|ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|222833851|gb|EEE72328.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK----PKPKLP------LYAETDFKLFVGN 50
M+T E+ A I+ + E GRI+RV F+ + P P+LP ET KL++ N
Sbjct: 141 MTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISN 200
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
L+W V L + F N V +RV++DG +GRS GYGFV ++T+ E A+ + +G EL
Sbjct: 201 LAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKEL 260
Query: 111 EGRAMRVSLAQGR 123
GR +R+ ++ +
Sbjct: 261 MGRPIRLKFSEDK 273
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV NL WS + + F + G V ++ ++GRSRG+ FV +T E + A++
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 105 LNGVELEGRAMRVSLAQGRR 124
N +E+ GR +RV A+ R
Sbjct: 154 FNSLEVSGRIIRVEFAKRLR 173
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 32/150 (21%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF---------------- 44
MS+V + A + +G E GR LRVN + P PK E F
Sbjct: 139 MSSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKR----EDGFSRGPRSSFGSSGSGYG 193
Query: 45 -----------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
+++VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV Y
Sbjct: 194 GGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYD 253
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ E++ A++SL+G +L+GR +RVS A+ R
Sbjct: 254 SSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 28 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 87
F+D PK ++ D KLFVGNL ++V + L Q F+ GNV V+YD +GRSRG+
Sbjct: 76 FADVAPPKEQSFS-ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGF 134
Query: 88 GFVCYSTKAEMETALESLNGVELEGRAMRVS 118
GFV S+ +E+E A + NG EL+GR +RV+
Sbjct: 135 GFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 32/150 (21%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF---------------- 44
MS+V + A + +G E GR LRVN + P PK E F
Sbjct: 139 MSSVSEVEAAAQQFNGYELDGRPLRVN-AGPPPPKR----EDGFSRGPRSSFGSSGSGYG 193
Query: 45 -----------KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
+++VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV Y
Sbjct: 194 GGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYD 253
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ E++ A++SL+G +L+GR +RVS A+ R
Sbjct: 254 SSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 28 FSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY 87
F+D PK ++ D KLFVGNL ++V + L Q F+ GNV V+YD +GRSRG+
Sbjct: 76 FADVAPPKEQSFS-ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGF 134
Query: 88 GFVCYSTKAEMETALESLNGVELEGRAMRVS 118
GFV S+ +E+E A + NG EL+GR +RV+
Sbjct: 135 GFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 20/143 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET------------------ 42
MSTVE+ +E L+G GR L+VN S P PK
Sbjct: 122 MSTVEEVEEAVERLNGYVLDGRALKVN-SGPPPPKDQSSPRGFREQSGGFRQQSSRGPSG 180
Query: 43 -DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D +++VGNLSW+V +L F E G+V+GARV+YD ESGRSRG+GFV Y T E++ A
Sbjct: 181 GDNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKA 240
Query: 102 LESLNGVELEGRAMRVSLAQGRR 124
+ +L+G +++GR +RV++A+ R+
Sbjct: 241 VSNLDGTDMDGRQIRVTVAEARQ 263
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV ST E+E A+
Sbjct: 73 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 132
Query: 103 ESLNGVELEGRAMRVS 118
E LNG L+GRA++V+
Sbjct: 133 ERLNGYVLDGRALKVN 148
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 10/129 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKPKLPLYAETDFKLFVGNL 51
MS+VE+ NA IE+L+ E GR ++VN ++ P+P+ P + ++ +K++VGNL
Sbjct: 117 MSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPSAPEPE-PAFVDSQYKVYVGNL 175
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +VTTE L F E G V+ A V + +S+GYGFV +S++ E+E A+ + N ELE
Sbjct: 176 AKTVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELE 235
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 236 GQPIRVNRA 244
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +VT + L F ++G V+ A V+YD SGRSR +GFV S+ E A+ES
Sbjct: 70 KLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIES 129
Query: 105 LNGVELEGRAMRVSLAQG 122
LN E+ GR ++V++ +
Sbjct: 130 LNETEVGGRKIKVNVTES 147
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M ++E+ ++ + + GR ++VNF + P+ Y ++ K++
Sbjct: 164 MGSIEEAKGAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYA 223
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T++ L AF + V+GA+V+Y+ +GRSRG+GF+ + + +++AL ++NGV
Sbjct: 224 GNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 283
Query: 109 ELEGRAMRVSLAQGR 123
E+EGRA+R++LA R
Sbjct: 284 EVEGRALRLNLASER 298
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +++T+ L+Q F E G VV +++YD + RSRG+GFV + E + A++
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQM 176
Query: 105 LNGVELEGRAMRVSLAQGRR 124
N ++ GR ++V+ + R
Sbjct: 177 FNSSQIGGRTVKVNFPEVPR 196
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 82/135 (60%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M ++E+ ++ + + GR ++VNF + P+ Y ++ K++
Sbjct: 156 MGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYA 215
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W++T++ L AF + V+GA+V+Y+ +GRSRG+GF+ + + +++AL ++NGV
Sbjct: 216 GNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 275
Query: 109 ELEGRAMRVSLAQGR 123
E+EGRA+R++LA R
Sbjct: 276 EVEGRALRLNLASER 290
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++L+VGNL +++T+ L+Q F E G VV +++YD + RSRG+GFV + E + A+
Sbjct: 107 EWRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAM 166
Query: 103 ESLNGVELEGRAMRVSLAQGRR 124
+ N ++ GR ++V+ + R
Sbjct: 167 QMFNSSQIGGRTVKVNFPEVPR 188
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 10/129 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKPKLPLYAETDFKLFVGNL 51
MST E+ NA IE+L+ E GR ++VN ++ P+P+ P++ ++ +K++VGNL
Sbjct: 118 MSTPEEANAAIESLNETEVGGRKIKVNVTESFLPNIDRSAPEPE-PVFVDSQYKVYVGNL 176
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ SVTTE L F E G V+ A V + +S+GYGFV +S++ E++ A+ + N ELE
Sbjct: 177 AKSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELE 236
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 237 GQPIRVNKA 245
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +VT + L F ++G V A V++D +GRSR +GFV ST E A+ES
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 105 LNGVELEGRAMRVSLAQ 121
LN E+ GR ++V++ +
Sbjct: 131 LNETEVGGRKIKVNVTE 147
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 82/135 (60%), Gaps = 12/135 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M ++E+ ++ + + GR ++VNF + P+ Y ++ K++
Sbjct: 164 MGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYA 223
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W++T++ L AF + V+GA+V+Y+ +GRSRG+GF+ + + +++AL ++NGV
Sbjct: 224 GNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 283
Query: 109 ELEGRAMRVSLAQGR 123
E+EGRA+R++LA R
Sbjct: 284 EVEGRALRLNLASER 298
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +++T+ L+Q F E G VV +++YD + RSRG+GFV + E + A++
Sbjct: 117 RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQM 176
Query: 105 LNGVELEGRAMRVSLAQGRR 124
N ++ GR ++V+ + R
Sbjct: 177 FNSSQIGGRTVKVNFPEVPR 196
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 63/82 (76%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D +++VGNLSW+V +L F E G+V+GARV+YD ESGRSRG+GFV Y + E+E A+
Sbjct: 186 DNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAV 245
Query: 103 ESLNGVELEGRAMRVSLAQGRR 124
+L+G +L+GR +RV++A+ R+
Sbjct: 246 SNLDGTDLDGRQIRVTVAEARQ 267
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV ST E+E A+
Sbjct: 76 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 135
Query: 103 ESLNGVELEGRAMRVS 118
E LNG L+GR ++V+
Sbjct: 136 EQLNGYVLDGRTIKVN 151
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 18/134 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET-------------DFKLF 47
M+T E+ I+ DG GR RVN+ P++P E +K++
Sbjct: 158 MATAEEAAKAIQMFDGALLGGRTARVNY-----PEVPRGGERRTVTMAGRRRDDGTYKIY 212
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L F+ ++ ARV+++ E+GRSRG+GFV + T + + ALE+L+G
Sbjct: 213 AGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEALDG 272
Query: 108 VELEGRAMRVSLAQ 121
VELEGR +R+SLA+
Sbjct: 273 VELEGRPLRLSLAE 286
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%)
Query: 32 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
P P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV
Sbjct: 98 PPRSRPTRGDDPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVT 157
Query: 92 YSTKAEMETALESLNGVELEGRAMRVS 118
+T E A++ +G L GR RV+
Sbjct: 158 MATAEEAAKAIQMFDGALLGGRTARVN 184
>gi|357457543|ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein [Medicago truncatula]
Length = 235
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 80/128 (62%), Gaps = 8/128 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK--LPL------YAETDFKLFVGNLS 52
M TVED NA E L+G E GR ++VN ++KP LP+ + ++ +K++VGNL+
Sbjct: 108 MKTVEDANAAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLA 167
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+VT++SL + F E GN + A+V + +S G+GFV +S+ ++E A+ S N LEG
Sbjct: 168 KNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEG 227
Query: 113 RAMRVSLA 120
+ +RV+ A
Sbjct: 228 QKIRVNKA 235
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +V+ + L + QE+G V A V+YD S RSR + FV T + A E
Sbjct: 61 KLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEK 120
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 121 LNGTEIGGREIKVNITE 137
>gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
M T ED NA IE L+G E GR ++VN ++KP L L + ++ +K++VGNL
Sbjct: 127 MKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQFVDSPYKVYVGNL 186
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +V T++L F + GNV+ A+V + +S G+GFV +S++ ++E A+ S N LE
Sbjct: 187 AKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLE 246
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 247 GQPIRVNKA 255
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ ++T E LT+ +E+G V A V+YD SGRSR + FV T + A+E
Sbjct: 80 RLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEK 139
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 140 LNGTEIGGREIKVNITE 156
>gi|224106031|ref|XP_002314019.1| predicted protein [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
M T ED NA IE L+G E GR ++VN ++KP L L + ++ +K++VGNL
Sbjct: 127 MKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQFVDSPYKVYVGNL 186
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +V T++L F + GNV+ A+V + +S G+GFV +S++ ++E A+ S N LE
Sbjct: 187 AKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVEVAISSFNNSLLE 246
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 247 GQPIRVNKA 255
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ ++T E LT+ +E+G V A V+YD SGRSR + FV T + A+E
Sbjct: 80 RLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANAAIEK 139
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 140 LNGTEIGGREIKVNITE 156
>gi|388508598|gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 8/126 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP--KPKLPL------YAETDFKLFVGNLS 52
M TVED NA E L+G E GR ++VN ++KP LP+ + ++ +K++VGNL+
Sbjct: 108 MKTVEDANAAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLA 167
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+VT++SL + F E GN + A+V + +S G+GFV +S+ ++E A+ S N LEG
Sbjct: 168 KNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEG 227
Query: 113 RAMRVS 118
+ +RV+
Sbjct: 228 QKIRVN 233
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +V+ + L + QE+G V A V+YD S RSR + FV T + A E
Sbjct: 61 KLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANAAAEK 120
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 121 LNGTEIGGREIKVNITE 137
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ E +++ FVGNLSWS T ESL AF +YG V A+V+ D SGRSRG+ FV + K
Sbjct: 1 MADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
ME A+E +NG++LEGRA+ V AQ
Sbjct: 61 MEEAIEDMNGLDLEGRAITVDKAQ 84
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 19/135 (14%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVN------------FSDKPKPKLPLYAETDFKLFV 48
MS+VE+ ++ +G GR LRVN +P+ +++V
Sbjct: 129 MSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDAN-------RVYV 181
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW V +L F E G V+ AR++YD ESGRSRG+GFV Y + E+E A+ +L+G
Sbjct: 182 GNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGA 241
Query: 109 ELEGRAMRVSLAQGR 123
+L+GR +RV++A+ +
Sbjct: 242 DLDGRQIRVTVAESK 256
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 80 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAV 139
Query: 103 ESLNGVELEGRAMRVS 118
+ NG L+GR++RV+
Sbjct: 140 DQFNGYVLDGRSLRVN 155
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 19/135 (14%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVN------------FSDKPKPKLPLYAETDFKLFV 48
MS+VE+ ++ +G GR LRVN +P+ +++V
Sbjct: 131 MSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDAN-------RVYV 183
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW V +L F E G V+ AR++YD ESGRSRG+GFV Y + E+E A+ +L+G
Sbjct: 184 GNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGA 243
Query: 109 ELEGRAMRVSLAQGR 123
+L+GR +RV++A+ +
Sbjct: 244 DLDGRQIRVTVAESK 258
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E+E A+
Sbjct: 82 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAV 141
Query: 103 ESLNGVELEGRAMRVS 118
+ NG L+GR++RV+
Sbjct: 142 DQFNGYVLDGRSLRVN 157
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++ F+GNLSWS T ESL AF ++GN+ A+V++D SGRSRG+GFV + K ME A+E
Sbjct: 7 YRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIE 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
+NG++L+GRA+ V AQ
Sbjct: 67 GMNGLDLDGRAITVDKAQ 84
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPL-YAETDFKLFVGNLSWSVT 56
+++++ ++ LDG GR L+ +FS K + P+ A + K+F+GNL W V
Sbjct: 50 LTSIDFAQVAVQKLDGHIVQGRALKASFSQPYKKAGKEGPVEVAASHTKVFIGNLPWGVD 109
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
SL + F+ +G VV A+++YD ++GRSRG+GFV S+ E + A++SL+G + +GR +R
Sbjct: 110 DGSLEEFFRAHGKVVEAKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLR 169
Query: 117 VSLA 120
V LA
Sbjct: 170 VKLA 173
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGAR-VLYDGESGRSRGYGFVCYSTKAEMETALE 103
+++VGNLSW+ +E L + Q+ G + V+ D E+GRSRG+G+V ++ + A++
Sbjct: 2 RIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAVQ 61
Query: 104 SLNGVELEGRAMRVSLAQ 121
L+G ++GRA++ S +Q
Sbjct: 62 KLDGHIVQGRALKASFSQ 79
>gi|356557128|ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
M TVED AVIE L+G E GR ++VN ++KP L L + ++ K++VGNL
Sbjct: 118 MKTVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAEESEFIDSPHKVYVGNL 177
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +VTT++L F E G V+ A+V + +S GYGFV + ++ ++E A+ S N LE
Sbjct: 178 AKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEEDVEAAISSFNNSLLE 237
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 238 GQTIRVNKA 246
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ +VT + L + QE+G V A V+YD SGRSR + FV T + +E
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG EL GR ++V++ +
Sbjct: 131 LNGTELGGREIKVNVTE 147
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++ F+GNLSWS T ESL AF+++GNV A+V+ D SGRSRG+ FV + K +ME A+E
Sbjct: 7 YRCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIE 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
+NG++L+GRA+ V AQ
Sbjct: 67 DMNGLDLDGRAITVDKAQ 84
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 81/137 (59%), Gaps = 14/137 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK-----PKLP---------LYAETDFKL 46
MS+ E+ A +E +G + GR LRVN P P+ P + ++ K+
Sbjct: 127 MSSAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGGGGGFVDSANKV 186
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+W V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +L+
Sbjct: 187 YVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNAISNLD 246
Query: 107 GVELEGRAMRVSLAQGR 123
G++L+GR +RV+ A+ +
Sbjct: 247 GIDLDGRQIRVTAAESK 263
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL +SV + L F++ G+V V+YD +GRSRG+GFV S+ E E A+
Sbjct: 78 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAAV 137
Query: 103 ESLNGVELEGRAMRVS 118
E NG +GR +RV+
Sbjct: 138 EQFNGYAFQGRQLRVN 153
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK------PKPKLPLYAETDFKLFVGNLSWS 54
M++ ++ A I+ D +E GR+++V F+ + PKP P ET KL+V NL+W
Sbjct: 141 MASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWK 200
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V + +L F E N + ARV++D +GRS GYGFV ++T+ E +TAL SL G EL GR
Sbjct: 201 VRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRP 260
Query: 115 MRVSLAQ 121
+R+ ++
Sbjct: 261 LRLKFSE 267
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++ NL WS++ + + F + G V ++ ++GRSRG+ FV ++ E + A++
Sbjct: 95 KLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMASPDEAQAAIQK 153
Query: 105 LNGVELEGRAMRVSLAQ 121
+ E+ GR ++V A+
Sbjct: 154 FDSQEISGRVIKVEFAK 170
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL+WS T SLTQAF +YG VV A V+ D E+GRSRG+GF+ +S + + + A+++
Sbjct: 6 KLFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAAIDA 65
Query: 105 LNGVELEGRAMRVSLA 120
LN +++GR +RV+ A
Sbjct: 66 LNEADVDGRNIRVNFA 81
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 79/133 (59%), Gaps = 13/133 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP-------------KPKLPLYAETDFKLF 47
M+T E+ ++ +G GR +RVNF + P K L + + +K++
Sbjct: 169 MATAEEAAKAVQMFNGALLGGRTIRVNFPEVPRGGERAVASAAAAKTSLRVVDDGTYKVY 228
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
GNL W V ++L AF+ ++G+RV+++ ++GRSRG+GFV + T + A+++++G
Sbjct: 229 AGNLGWGVRADALKTAFEGQPGLLGSRVIFERDTGRSRGFGFVSFQTLEDANAAIQAMDG 288
Query: 108 VELEGRAMRVSLA 120
VEL+GR +R+SLA
Sbjct: 289 VELDGRPLRLSLA 301
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 32 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
P P + +++VGNL ++ T LT F E G+V +++YD + RSRG+ FV
Sbjct: 109 PPRTRPALGQEPGRIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVT 168
Query: 92 YSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+T E A++ NG L GR +RV+ +
Sbjct: 169 MATAEEAAKAVQMFNGALLGGRTIRVNFPE 198
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK------PKPKLPLYAETDFKLFVGNLSWS 54
M++ ++ A I+ D +E GR+++V F+ + PKP P ET KL+V NL+W
Sbjct: 135 MASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWK 194
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
V + +L F E N + ARV++D +GRS GYGFV ++T+ E +TAL SL G EL GR
Sbjct: 195 VRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRP 254
Query: 115 MRVSLAQ 121
+R+ ++
Sbjct: 255 LRLKFSE 261
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++ NL WS++ + + F + G V ++ ++GRSRG+ FV ++ E + A++
Sbjct: 89 KLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQ-KNGRSRGFAFVTMASPDEAQAAIQK 147
Query: 105 LNGVELEGRAMRVSLAQ 121
+ E+ GR ++V A+
Sbjct: 148 FDSQEISGRVIKVEFAK 164
>gi|449436259|ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
gi|449489082|ref|XP_004158209.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP----------KPKLPLYAETDFKLFVGN 50
M TVED NA IE L+ E GR ++VN ++KP + + + ++ +K++VGN
Sbjct: 122 MKTVEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAEESQFIDSPYKVYVGN 181
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
+S +V+TE+L F E G V+ A+V + +S GYGFV +S++ E++ A+ S N L
Sbjct: 182 ISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISSFNNALL 241
Query: 111 EGRAMRVSLA 120
EG+ +RV+ A
Sbjct: 242 EGQPIRVNKA 251
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++GN+ +V E LT+ QE+G V A V+YD SGRSR + FV T + A+E
Sbjct: 75 KLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 134
Query: 105 LNGVELEGRAMRVSLAQ 121
LN E+ GR ++V++ +
Sbjct: 135 LNETEVGGRKIKVNITE 151
>gi|30693595|ref|NP_566958.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79314769|ref|NP_001030841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17979394|gb|AAL49922.1| unknown protein [Arabidopsis thaliana]
gi|22136722|gb|AAM91680.1| unknown protein [Arabidopsis thaliana]
gi|332645382|gb|AEE78903.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332645383|gb|AEE78904.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 253
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 10/130 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPKLPL-------YAETDFKLFVGN 50
M +VED NAV+E L+G GR ++VN ++KP P L + + ++ +K++VGN
Sbjct: 124 MKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSPYKVYVGN 183
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
L+ +VT E L F E G VV A+V + +S G+GFV +S++ ++E A+ +LN L
Sbjct: 184 LAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLL 243
Query: 111 EGRAMRVSLA 120
EG+ +RV+ A
Sbjct: 244 EGQKIRVNKA 253
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
++++GN+ +VT E LT+ +E+G V +V+YD SGRSR +GF + + +E
Sbjct: 77 RVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEK 136
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG +EGR ++V++ +
Sbjct: 137 LNGNTVEGREIKVNITE 153
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E +++ F+GNLSWS + L AF+++GN+V A+V+ D SGRSRG+GFV + K ME
Sbjct: 4 EDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMED 63
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E++NG++L+GRA+ V AQ
Sbjct: 64 AIEAMNGMDLDGRAITVDKAQ 84
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ F+GNLSWS + L AF+++GN+V A+V+ D SGRSRG+GFV + K ME
Sbjct: 2 ADDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAME 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NGV+L+GR + V AQ
Sbjct: 62 DAIEAMNGVDLDGRDITVDKAQ 83
>gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
Length = 253
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 10/130 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP---KPKLPL-------YAETDFKLFVGN 50
M +VED NAV+E L+G GR ++VN ++KP P L + + ++ +K++VGN
Sbjct: 124 MKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSPYKVYVGN 183
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
L+ +VT E L F E G VV A+V + +S G+GFV +S++ ++E A+ +LN L
Sbjct: 184 LAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAVVALNNSLL 243
Query: 111 EGRAMRVSLA 120
EG+ +RV+ A
Sbjct: 244 EGQKIRVNKA 253
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
++++GN+ +V+ E LT+ +E+G V +V+YD SGRSR +GF + + +E
Sbjct: 77 RVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEK 136
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG +EGR ++V++ +
Sbjct: 137 LNGNTVEGREIKVNITE 153
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AET+++ FVG L+W+ +L QAF +YG ++ A+++ D E+GRSRG+GFV + ++ M
Sbjct: 2 AETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 62 QAIEEMNGKELDGRNITVNEAQSRRS 87
>gi|225450219|ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 81/130 (62%), Gaps = 10/130 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
M TVED NA IE L+G E GR ++VN ++KP L + + ++ K++VGNL
Sbjct: 118 MKTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSPHKVYVGNL 177
Query: 52 SWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
+ +VTT++LTQ F E G V+ A+V + +S G+GFV +S++ ++E A+ S N L
Sbjct: 178 ARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAISSCNNAFL 237
Query: 111 EGRAMRVSLA 120
+G+ +RV+ A
Sbjct: 238 DGQRIRVNKA 247
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ ++ + L + +E+G V A V+YD SGRSR + FV T + A+E
Sbjct: 71 RLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 130
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ GR ++V++ +
Sbjct: 131 LNGTEIGGREIKVNITE 147
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKL--------PLYAETDFKLFVGNLS 52
MST E+ A IE+L+ E GR ++VN ++ P + P + ++ +K++VGNL+
Sbjct: 117 MSTAEEVAAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFVDSQYKVYVGNLA 176
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
VTTE L F E G V+ A V + +S+GYGFV +S++ E+E A+ + N ELEG
Sbjct: 177 KKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTFSSEEEVEAAVSTFNNTELEG 236
Query: 113 RAMRVSLA 120
+ +RV+ A
Sbjct: 237 QTIRVNRA 244
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +VT + L+ F +G VV A V+YD SGRSR +GFV ST E+ A+ES
Sbjct: 70 KLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIES 129
Query: 105 LNGVELEGRAMRVSLAQG 122
LN E+ GR ++V++ +
Sbjct: 130 LNDTEVGGRKIKVNVTES 147
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 13/137 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKLPL----YAETDFKLFV 48
M +VE+ I+ +G ++ GR +RVNF + P+ P++ + +++ K++
Sbjct: 161 MGSVEEAKKAIQMFNGTQFGGRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKIYA 220
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T+E L AF V+ A+V+Y+ +S RSRG+GFV + + E ALE++NG
Sbjct: 221 GNLGWRLTSEGLRDAFANQPGVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEAMNGE 280
Query: 109 ELEGRAMRVSLAQGRRS 125
E+EGR MR++LA G RS
Sbjct: 281 EVEGRPMRLNLA-GERS 296
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL +S+T+ LT+ F+E G V A V+YD + RSRG+GFV + E + A++
Sbjct: 114 KLYVGNLPYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKKAIQM 173
Query: 105 LNGVELEGRAMRVSLAQGRR 124
NG + GR++RV+ + R
Sbjct: 174 FNGTQFGGRSVRVNFPEVPR 193
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+++VGNLSW V +L F E G V ARV+YD E+GRSRG+GFV Y++ E+ A+ES
Sbjct: 171 RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIES 230
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+GV+L GR++RV++A+ R
Sbjct: 231 LDGVDLNGRSIRVTMAEAR 249
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N + L+G+E G++L++N++ + + + ++ F LFVG+L+ V +L F+
Sbjct: 149 DANVAYQTLNGKEVEGKVLKINWAFQSQQ---VNSDETFNLFVGDLNVDVDDATLAGTFK 205
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
E+ + + A V++D +SGRSRGYGFV + + + + A+E+ G EL GRA+R++ A R
Sbjct: 206 EFPSFIQAHVMWDMQSGRSRGYGFVSFGEQDQAQVAMETKQGFELNGRALRINWASKR 263
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
++D L+VGNL S+ + L Q FQ G++ +++ D S + Y FV Y +
Sbjct: 94 KSDKILYVGNLPKSIDDDLLKQYFQIGGSISSVKIIPDKNS-QECNYAFVEYFEPHDANV 152
Query: 101 ALESLNGVELEGRAMRVSLA 120
A ++LNG E+EG+ ++++ A
Sbjct: 153 AYQTLNGKEVEGKVLKINWA 172
>gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 256
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL---------YAETDFKLFVGNL 51
M TVED NAVIE L+G + GR ++VN ++KP L + ++ K++VGNL
Sbjct: 128 MRTVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEESQFVDSPHKVYVGNL 187
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +VT+E L F E G V+ A+V + +S GYGFV +S + ++E A+ S N LE
Sbjct: 188 AKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEEDVEAAISSFNNSLLE 247
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 248 GQKIRVNKA 256
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L++GN+ +V + LT+ +E+G V A V+YD SGRSR + FV T + +E
Sbjct: 81 RLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDANAVIEK 140
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG ++ GR ++V++ +
Sbjct: 141 LNGTQIGGREIKVNITE 157
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AET+++ FVG L+W+ +L AF +YG ++ A+++ D E+GRSRG+GFV + ++ M
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR++ V+ AQ RRS
Sbjct: 62 QAIEEMNGKELDGRSITVNEAQSRRS 87
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL QAF +YGNV+ + V+ D ++GRSRG+GFV YS E + A+ S
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+ EL+GR ++V++A R
Sbjct: 64 LHDQELDGRRIKVNIANAR 82
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA------ETDFKLFVGNLSWSVTTE 58
E+ A I+ LD E GRI+RV F+ + KP P ET K++V NL+W V +
Sbjct: 134 EEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRST 193
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
L + F + V +RV++D +GRS GYGFV ++T+ E E A+ +L+G EL GR +R+
Sbjct: 194 HLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRLK 253
Query: 119 LA 120
+
Sbjct: 254 FS 255
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V NL WS++ + F + G V ++ ++GRSRG+ FV ++ E + A++
Sbjct: 84 KLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQ-KNGRSRGFAFVTLASGEEAQAAIDK 142
Query: 105 LNGVELEGRAMRVSLAQ 121
L+ E+ GR +RV A+
Sbjct: 143 LDSHEVSGRIIRVEFAK 159
>gi|255548039|ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 281
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 13/129 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKP--KLP---LYAETDFKLFV 48
M ++ I LDG + GR +RV FS P+P P L+ E+ FK++V
Sbjct: 146 MGSINSAKNAIAALDGSDIGGREMRVKFSVDMNSGRRNPEPLSSAPTKNLFYESPFKVYV 205
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL+W+V E L F ++G VV ARVLYD ++G++R YGF+ +S+ E + AL S NG
Sbjct: 206 GNLAWTVKPEELRDQFSKFGTVVSARVLYDRKAGKNRAYGFLSFSSTKERDAAL-SFNGK 264
Query: 109 ELEGRAMRV 117
+ GR + V
Sbjct: 265 DFRGRILVV 273
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+V NL S L + F+ YG V+ V + E+G SRG GFV + + A+ +
Sbjct: 99 ELYVCNLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCGFVTMGSINSAKNAIAA 158
Query: 105 LNGVELEGRAMRVSLA----QGRRS 125
L+G ++ GR MRV + GRR+
Sbjct: 159 LDGSDIGGREMRVKFSVDMNSGRRN 183
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 60/79 (75%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSWS T ++L +AF EYG VV + V+ D E+GRSRG+GFV +S++ E E A+ S
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+ +L+GR ++V+LA R
Sbjct: 64 LHEQDLDGRRIKVNLANAR 82
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD---KPKPKLPL-YAETDFKLFVGNLSWSVT 56
+++++ ++ LDG GR L+ ++S K + P+ A + K+F+GNL W V
Sbjct: 50 LTSIDFAQVAVQKLDGHIVQGRALKASYSQPYKKAGKEGPVEVAASHTKVFIGNLPWGVD 109
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
SL + F+ +G VV +++YD ++GRSRG+GFV S+ E + A++SL+G + +GR +R
Sbjct: 110 DGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEAVKSLDGADCDGRRLR 169
Query: 117 VSLA 120
V LA
Sbjct: 170 VKLA 173
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGAR-VLYDGESGRSRGYGFVCYSTKAEMETALE 103
+++VGNLSW+ +E L + Q+ G + V+ D E+GRSRG+G+V ++ + A++
Sbjct: 2 RIYVGNLSWNCDSEELAKVLQQAGILAHVEEVVCDRETGRSRGFGYVTLTSIDFAQVAVQ 61
Query: 104 SLNGVELEGRAMRVSLAQ 121
L+G ++GRA++ S +Q
Sbjct: 62 KLDGHIVQGRALKASYSQ 79
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 314
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L+GR +RVS A+ R
Sbjct: 315 LNGADLDGRQIRVSEAEAR 333
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 102 LESLNGVELEGRAMRVS 118
+ NG E EGR +RV+
Sbjct: 157 AQQFNGYEFEGRPLRVN 173
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L+GR +RVS A+ R
Sbjct: 302 LNGADLDGRQIRVSEAEAR 320
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 89 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 148
Query: 102 LESLNGVELEGRAMRVS 118
+ NG E EGR +RV+
Sbjct: 149 AQQFNGYEFEGRPLRVN 165
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L+GR +RVS A+ R
Sbjct: 318 LNGADLDGRQIRVSEAEAR 336
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 102 LESLNGVELEGRAMRVS 118
+ NG E EGR +RV+
Sbjct: 157 AQQFNGYEFEGRPLRVN 173
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L+GR +RVS A+ R
Sbjct: 310 LNGADLDGRQIRVSEAEAR 328
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 102 LESLNGVELEGRAMRVS 118
+ NG E EGR +RV+
Sbjct: 157 AQQFNGYEFEGRPLRVN 173
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++ F+GNLSWS T ESL AF ++GN+ A+V+ D SGRSRG+GFV + K ME A+E
Sbjct: 7 YRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIE 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
+NG++L+GR + V AQ
Sbjct: 67 GMNGLDLDGRNITVDKAQ 84
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ESL AF YG ++ + V+ D ++GRSRG+GFV +S+ AE + A+ S
Sbjct: 4 KVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIAS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN +L+GR +RV+LA R
Sbjct: 64 LNEQDLDGRRIRVNLANAR 82
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N + LDG++ ++++N++ + + + ++ F LFVG+L+ V E+L+ F+
Sbjct: 87 DANVAFQTLDGKQIENNVIKINWAFQSQQ---VSSDDTFNLFVGDLNVDVDDETLSSTFK 143
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
E+ + A V++D +SGRSRGYGFV + + E + A+++ G L GRA+RV+ A R S
Sbjct: 144 EFPTFIQAHVMWDMQSGRSRGYGFVSFGEQEEAQKAMDAKQGFNLNGRAIRVNWAAKRES 203
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++ +L Q FQ G + +VL D ++ Y FV Y + A
Sbjct: 33 SDRILYVGNLDKTINEATLKQYFQVGGPIANVKVLVD-KNNEEANYAFVEYRQPRDANVA 91
Query: 102 LESLNGVELEGRAMRVSLA 120
++L+G ++E ++++ A
Sbjct: 92 FQTLDGKQIENNVIKINWA 110
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNLSW V +L F E G VV ARV+YD +SGRS+G+GFV S+ E++ A+ S
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L+GR +RVS A+ R
Sbjct: 339 LNGADLDGRQIRVSEAEAR 357
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 21/98 (21%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D KLFVGNLS++V + L Q F+ GNV V+YD +GRSRG+GFV ST AE+E A
Sbjct: 97 PDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAA 156
Query: 102 LESLN---------------------GVELEGRAMRVS 118
+ N G+E EGR +RV+
Sbjct: 157 AQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVN 194
>gi|363750866|ref|XP_003645650.1| hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889284|gb|AET38833.1| Hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N + LDG++ G ++++N++ + + + ++ F LFVG+L+ V E+LT F+
Sbjct: 115 DANVAFQTLDGKQIEGNVIKINWAFQSQH---VSSDDTFNLFVGDLNVDVDDETLTGTFK 171
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
E+ + + A V++D SGRSRGYGFV +S + + A+ES G L GRA+R++ A R
Sbjct: 172 EFPSFIQAHVMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRAIRINWASKR 229
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++ ++L Q FQ G + +VL D ++ Y FV Y + A
Sbjct: 61 SDRILYVGNLDKAINEDTLKQYFQVGGPIANVKVLVD-KNNEEANYAFVEYHQPHDANVA 119
Query: 102 LESLNGVELEGRAMRVSLA 120
++L+G ++EG ++++ A
Sbjct: 120 FQTLDGKQIEGNVIKINWA 138
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++ F+GNLSWS T ESL AF ++GN+ A+V+ D SGRSRG+GFV + K ME A+E
Sbjct: 7 YRCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIE 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
+NG++L+GR + V AQ
Sbjct: 67 GMNGLDLDGRNITVDKAQ 84
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ ESL Q F E+GNV+ A V+ D E+GRSRG+GFV +S + E + A+
Sbjct: 5 KVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGG 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV+LA R
Sbjct: 65 LNEQELDGRRIRVNLANAR 83
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 63/86 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E++NG +L+GR + V+ AQ RRS
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQSRRS 87
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AET+++ FVG L+W+ +L AF +YG ++ A+++ D E+GRSRG+GFV + ++ M
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 62 QAIEEMNGKELDGRQVTVNEAQSRRS 87
>gi|225427185|ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA---------ETDFKLFVGNL 51
M + E+ AV+E D E GRI+RV F+ + K P ET KL+V NL
Sbjct: 136 MDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNL 195
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+W V + L + F N V RV++D SGRS GYGF ++TK E E A+ +L+G EL
Sbjct: 196 AWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELM 255
Query: 112 GRAMRVSLA 120
GR + + +
Sbjct: 256 GRPVHLKFS 264
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV NL WS++ + F E G V ++ + GRSRGY FV + E + +E
Sbjct: 90 KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTMDSGEEAQAVVEK 148
Query: 105 LNGVELEGRAMRVSLAQ 121
+ EL GR +RV A+
Sbjct: 149 FDSYELSGRIIRVEFAK 165
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL W+ T +SL AFQ+YG ++ + V+ D ++GRSRG+GFV + + E ETA+ S
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIIS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L QAF +GNVV + V+ D ++GRSRG+GFV YS+ E E+A+
Sbjct: 5 KIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISG 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN +L+GR ++V++A R
Sbjct: 65 LNDQDLDGRRIKVNIANPR 83
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L +AF++YGNVV + V+ D E+GRSRG+GFV YS++ E A+
Sbjct: 4 KIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISG 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN L+GR ++V+LA R
Sbjct: 64 LNETSLDGRQIKVNLANAR 82
>gi|217073784|gb|ACJ85252.1| unknown [Medicago truncatula]
Length = 280
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 21/131 (16%)
Query: 14 LDGREYLGRILRVNFSDKPKPKL--------PLY-------------AETDFKLFVGNLS 52
L+G GR LRVN P P+ P + ++ D ++ VGNL+
Sbjct: 145 LNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGSSDGDNRVHVGNLA 204
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W V +L F E G V+ A+V+YD ESGRSRG+GFV +S+ E+++A+ +L+G +L G
Sbjct: 205 WGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIRTLDGADLNG 264
Query: 113 RAMRVSLAQGR 123
RA+RVS A R
Sbjct: 265 RAIRVSPADSR 275
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P Y+ +LFVG+L +SV + L + F+ G+V V+YD +GRSRG+GFV S+ A
Sbjct: 78 PSYSPNQ-RLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAA 136
Query: 97 EMETALESLNGVELEGRAMRVS 118
E+E A + LNG ++GR +RV+
Sbjct: 137 EVEAAAQQLNGYVVDGRELRVN 158
>gi|357440407|ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|388503166|gb|AFK39649.1| unknown [Medicago truncatula]
Length = 280
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 21/131 (16%)
Query: 14 LDGREYLGRILRVNFSDKPKPKL--------PLY-------------AETDFKLFVGNLS 52
L+G GR LRVN P P+ P + ++ D ++ VGNL+
Sbjct: 145 LNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGSSDGDNRVHVGNLA 204
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W V +L F E G V+ A+V+YD ESGRSRG+GFV +S+ E+++A+ +L+G +L G
Sbjct: 205 WGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIRTLDGADLNG 264
Query: 113 RAMRVSLAQGR 123
RA+RVS A R
Sbjct: 265 RAIRVSPADSR 275
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P Y+ +LFVGNL +SV + L + F+ G+V V+YD +GRSRG+GFV S+ A
Sbjct: 78 PSYSPNQ-RLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAA 136
Query: 97 EMETALESLNGVELEGRAMRVS 118
E+E A + LNG ++GR +RV+
Sbjct: 137 EVEAAAQQLNGYVVDGRELRVN 158
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLSW V +L F E G V+ A+V+YD +SGRSRG+GFV Y + E+ A+ +
Sbjct: 15 KLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVNNAISN 74
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+GV+L+GR +RV++A+ +
Sbjct: 75 LDGVDLDGRQIRVTVAESK 93
>gi|297742089|emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA---------ETDFKLFVGNL 51
M + E+ AV+E D E GRI+RV F+ + K P ET KL+V NL
Sbjct: 106 MDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNL 165
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+W V + L + F N V RV++D SGRS GYGF ++TK E E A+ +L+G EL
Sbjct: 166 AWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELM 225
Query: 112 GRAMRVSLA 120
GR + + +
Sbjct: 226 GRPVHLKFS 234
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV NL WS++ + F E G V ++ + GRSRGY FV + E + +E
Sbjct: 60 KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSRGYAFVTMDSGEEAQAVVEK 118
Query: 105 LNGVELEGRAMRVSLAQ 121
+ EL GR +RV A+
Sbjct: 119 FDSYELSGRIIRVEFAK 135
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L QAF +G V+ + V+ D E+GRSRG+GFV +S+ E E+A+ S
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 18/114 (15%)
Query: 21 GRILRVNFSDKPKPKLPLYAET-------------DFKLFVGNLSWSVTTESLTQAFQEY 67
GR RVN+ P++P E +K++ GNL W V ++L F+
Sbjct: 224 GRTARVNY-----PEVPRGGERRTVTMSGRRRDDGTYKIYAGNLGWGVRADTLRNVFEGR 278
Query: 68 GNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
++ ARV+++ E+GRSRG+GFV +ST + + ALESL+GVELEGR++R+SLA+
Sbjct: 279 AGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAE 332
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P + +LFVGNL ++ T+E L Q F E G V A+++YD + RSRG+ FV +T
Sbjct: 105 PPRGDDPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAE 164
Query: 97 EMETALESLNGV 108
E A++ +G
Sbjct: 165 EAAKAIQMFDGA 176
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 62/86 (72%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E++NG +L+GR + V+ AQ RRS
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQSRRS 87
>gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDF-----KLFVGNLSWSV 55
MSTVE+ + +E E GR+L VN + P+ P A +F + +VGNL W V
Sbjct: 160 MSTVEEADKAVEMFHSYELNGRLLTVNKA-APRGSRPEKAPREFCPLLSESYVGNLPWDV 218
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA-LESLNGVELEGRA 114
+ L Q E+G V+ ARV+ D E+ RSRG+GFV +++ EM A L +L+G LEGR
Sbjct: 219 DNDRLEQLSSEHGKVLSARVVSDRETERSRGFGFVTMASETEMNDATLGALDGESLEGRP 278
Query: 115 MRVSLAQGR 123
+RV++A+ R
Sbjct: 279 IRVNVAEER 287
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 8 NAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET-------DFKLFVGNLSWSVTTESL 60
NAVI+ + E + + +P+P +E D KL+VGNL + V +E L
Sbjct: 69 NAVIDEEENVEKTEAAVNWEDASEPQPSSGFGSEDGFSEPSEDVKLYVGNLPFDVDSEKL 128
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F G V A V+Y+ E+ RSRG+GFV ST E + A+E + EL GR + V+ A
Sbjct: 129 ANMFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEMFHSYELNGRLLTVNKA 188
Query: 121 QGRRS 125
R S
Sbjct: 189 APRGS 193
>gi|168054272|ref|XP_001779556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669037|gb|EDQ55632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNLSW +L F +YG VV AR+ YD +SGRSRG+GFV S + E+ TA+E+
Sbjct: 2 KLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIEN 61
Query: 105 LNGVELEGRAMRVSLA 120
L+G E + R +RV+LA
Sbjct: 62 LDGAEFDARQLRVNLA 77
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPK 35
+S + N IENLDG E+ R LRVN + DKP P+
Sbjct: 49 LSNETEVNTAIENLDGAEFDARQLRVNLAGDKPAPR 84
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G+ +I+++N++ + + + F LF+G+L+ V ESLT AF+
Sbjct: 135 DANVALQTLNGKHIEKKIVKINWAFQSQQS---SNDDTFNLFIGDLNIDVNDESLTAAFK 191
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + V A V++D ++GRSRGYGF +ST+ + + A++ + G EL GR +R++ A R
Sbjct: 192 DFPSFVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIRINWASKR 249
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+ +SL Q FQ G + +++ D ++ + Y FV Y + A
Sbjct: 81 SDKILYVGNLDKSINEDSLKQYFQVGGPIANVKIIVD-KNNKYCNYAFVEYLKHHDANVA 139
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG +E + ++++ A
Sbjct: 140 LQTLNGKHIEKKIVKINWA 158
>gi|367000405|ref|XP_003684938.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
gi|357523235|emb|CCE62504.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
Length = 442
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D + +NL+G+ ++L++N++ + + E+ F LFVG+L+ V E+L AF
Sbjct: 130 DADVAFKNLNGKTIETKVLKINWAFQSQQTTS--DESLFNLFVGDLNVDVDDETLGHAFS 187
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
E+ + V A V++D ++GRSRGYGF+ +S + + +TA++ + EL GR +R++ A R +
Sbjct: 188 EFPSFVQAHVMWDMQTGRSRGYGFISFSNQEDAQTAMDKMQSTELNGRQIRINWASKREN 247
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+ E+L Q FQ G + +V+ D S Y FV Y + + A
Sbjct: 77 SDKILYVGNLDKSINEETLKQYFQIGGPISNVKVIND--KNNSVNYAFVEYLQHHDADVA 134
Query: 102 LESLNGVELEGRAMRVSLA 120
++LNG +E + ++++ A
Sbjct: 135 FKNLNGKTIETKVLKINWA 153
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG+L WSV E+L + F+E+GNVV A+V+ D E+GRSRG+GFV A+ ++A+E+
Sbjct: 4 KLFVGSLPWSVDDETLRETFEEHGNVVSAKVIKDRETGRSRGFGFVEMENSADAKSAIEA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR + V+ A+ R
Sbjct: 64 LNDSELKGRNIVVNEAKSR 82
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKL----PLYAETDFKLFV 48
M +VE+ I +G + GR LRVNF + P+ P++ + +++ K++
Sbjct: 164 MESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYA 223
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T+E L AF ++ A+V+Y+ ++GRSRG+GFV + + E ALE++NG
Sbjct: 224 GNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGE 283
Query: 109 ELEGRAMRVSLAQGRRS 125
E++GR +R++LA G RS
Sbjct: 284 EVDGRPLRLNLA-GERS 299
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ A + KL+VGNL +S+T+ L + F+E G V GA V+ D + RSRG+GFV + E
Sbjct: 110 IKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEE 169
Query: 98 METALESLNGVELEGRAMRVSLAQGRR 124
+ A+ NG ++ GR +RV+ + R
Sbjct: 170 AKEAIRMFNGSQVGGRTLRVNFPEVPR 196
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF ++G ++ + V+ D ++GRSRG+GFV +S+ E +TA+ S
Sbjct: 4 KVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV+LA R
Sbjct: 64 LNEQELDGRRIRVNLANAR 82
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF YG ++ + V+ D ++GRSRG+GFV +S+ E +TA+ S
Sbjct: 4 KVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISS 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW+ +SL +AF +G+V ARV+ D ESGRSRG+GFV ++ + ++A+++
Sbjct: 38 KLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDA 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G ELEGR++RV+ A R
Sbjct: 98 MDGKELEGRSIRVNFANER 116
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 11/122 (9%)
Query: 11 IENLDGREYLGRILRVNFSDKPK-----------PKLPLYAETDFKLFVGNLSWSVTTES 59
I+ +G GR RVN+ + P+ + + FK++ GNL W V ++
Sbjct: 48 IQMFNGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRDDGTFKIYAGNLGWGVRADA 107
Query: 60 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 119
L AF+ ++ ARV+++ +SGRSRG+GFV + T + + ALE+L+GVELEGR +R+S+
Sbjct: 108 LRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSM 167
Query: 120 AQ 121
A+
Sbjct: 168 AE 169
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
+T+ ++Q F E G V +++YD + RSRG+ FV +T E TA++ NG L GR
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 115 MRVS 118
RV+
Sbjct: 61 ARVN 64
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 11/122 (9%)
Query: 11 IENLDGREYLGRILRVNFSDKPK-----------PKLPLYAETDFKLFVGNLSWSVTTES 59
I+ +G GR RVN+ + P+ + + FK++ GNL W V ++
Sbjct: 176 IQMFNGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRDDGTFKIYAGNLGWGVRADA 235
Query: 60 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 119
L AF+ ++ ARV+++ +SGRSRG+GFV + T + + ALE+L+GVELEGR +R+S+
Sbjct: 236 LRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSM 295
Query: 120 AQ 121
A+
Sbjct: 296 AE 297
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 32 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
P P + +LFVGNL +++T+ ++Q F E G V +++YD + RSRG+ FV
Sbjct: 106 PPRSRPALGQEPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVT 165
Query: 92 YSTKAEMETALESLNGVELEGRAMRVS 118
+T E TA++ NG L GR RV+
Sbjct: 166 MATAEEAATAIQMFNGALLGGRTARVN 192
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK--------PKL----PLYAETDFKLFV 48
M +VE+ I +G + GR LRVNF + P+ P++ + +++ K++
Sbjct: 38 MESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYA 97
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL W +T+E L AF ++ A+V+Y+ ++GRSRG+GFV + + E ALE++NG
Sbjct: 98 GNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGE 157
Query: 109 ELEGRAMRVSLAQGRRS 125
E++GR +R++LA G RS
Sbjct: 158 EVDGRPLRLNLA-GERS 173
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
+T+ L + F+E G V GA V+ D + RSRG+GFV + E + A+ NG ++ GR
Sbjct: 1 MTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRT 60
Query: 115 MRVSLAQ 121
+RV+ +
Sbjct: 61 LRVNFPE 67
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
++ VGNL+W V +L F+E G VV A+V+YD ESGRSRG+GFV +S+ E+ +A+ S
Sbjct: 219 RVHVGNLAWGVDNAALESLFREQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIRS 278
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GRA++VS A +
Sbjct: 279 LDGADLNGRAIKVSQADSK 297
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL +SV + L + FQ+ GNV V+YD +G SRG+ FV S+ AE E A
Sbjct: 86 DHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVTMSSAAEAEVAA 145
Query: 103 ESLNGVELEGRAMRVS 118
+ N ELEGRA+RV+
Sbjct: 146 QQFNNYELEGRALRVN 161
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 61/84 (72%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQGR 123
A+E++NG EL+GR + V+ AQ R
Sbjct: 64 DAIENMNGKELDGRNITVNQAQSR 87
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 20 LGRILRVNFSDK------PKPK-LPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 72
LG +LR N S P P L + KLFVG LSW +SL A +G+VV
Sbjct: 7 LGGLLRQNISGNAVSATTPMPSMLDAFRCMSTKLFVGGLSWGTDDQSLRDALATFGDVVD 66
Query: 73 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV+ D +SGRSRG+GFV +S A+++++G EL+GR +RV++AQ R
Sbjct: 67 ARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIAQER 117
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ D++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 61/81 (75%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T E+L AFQ++G ++ + V+ D ++GRSRG+GFV + + E ++A+++
Sbjct: 4 KVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQA 63
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LN EL+GR ++V+LA R S
Sbjct: 64 LNDQELDGRRIKVNLANARPS 84
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RV++AQ R
Sbjct: 99 MDGQELQGRNIRVTIAQER 117
>gi|297741610|emb|CBI32742.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 21/123 (17%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
MSTVE+ A + +G E GR LRVN P + +L
Sbjct: 21 MSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARR---------------------ENTL 59
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F E G V ARV+YD E+GRSRG+GFV Y++ E+ A+ESL+GV+L GR++RV++A
Sbjct: 60 ETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMA 119
Query: 121 QGR 123
+ R
Sbjct: 120 EAR 122
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 75 VLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
V+YD +GRSRG+GFV ST E+E A + NG ELEGR +RV+
Sbjct: 4 VIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVN 47
>gi|42522915|ref|NP_968295.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403373|ref|YP_007022344.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|39574111|emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860041|gb|AFY01077.1| putative RNA-binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 116
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLS+S+ +SL F E+GNV AR++ D E+GRS+G+ FV ST E TA+
Sbjct: 4 KIYVGNLSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIAK 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LNGVEL GRAM VS A+
Sbjct: 64 LNGVELMGRAMNVSEAK 80
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ E+L QAF +G V+ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV A V+ DG+SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L QAF E+G ++ + V+ D E+GRSRG+GFV + T E + A+ +
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINN 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV+LA +
Sbjct: 64 LNEQELDGRRIRVNLANAK 82
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
D+ P P +D +LFV LSWSV SLT AF +G V R++YD SGRSRG
Sbjct: 32 KLPDELPPGAP-APTSDSRLFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRG 90
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+GFV +S E + A ++++G + GR +R+S A GR
Sbjct: 91 FGFVHFSNDNEAKCAKDAMDGKVMLGRPLRISFALGR 127
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR + +RVN++ + F +FVG+LS V E L QAF +GNV
Sbjct: 140 MQTLNGRRVHQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNV 199
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 200 SEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQK 252
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY--GFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+GY GFV Y E A++
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPD-KNFQSKGYNYGFVEYDDPGAAERAMQ 141
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + + +RV+ A
Sbjct: 142 TLNGRRVHQQEIRVNWA 158
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V R D RG+ F+ + A+ L+
Sbjct: 302 YVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKMDSHENAANAICHLS 355
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + R
Sbjct: 356 GYQVNGRPLKCSWGKDR 372
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ FVG L+W+ +L AF +G ++ A+++ D E+GRSRG+GFV ++T+ M+ A+
Sbjct: 3 EYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAI 62
Query: 103 ESLNGVELEGRAMRVSLAQGRR 124
E +NG EL+GR++ V+ AQ RR
Sbjct: 63 EGMNGKELDGRSITVNQAQSRR 84
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLSW+ T ++L Q F E+G V + ++ D E+GR+RG+GFV +ST+ + A+++
Sbjct: 3 KLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV++A R
Sbjct: 63 LNEQELDGRRIRVNVANAR 81
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ ESL QAF ++G++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEGMNGQELDGRNITVNEAQ 83
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR + +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 142 MQTLNGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 201
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV Y + E E AL S++G L RA+R + A +
Sbjct: 202 SEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQK 254
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY--GFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+GY GFV Y E A++
Sbjct: 85 LYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPD-KNFQSKGYNYGFVEYDDPGAAERAMQ 143
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + + +RV+ A
Sbjct: 144 TLNGRRVHQQEIRVNWA 160
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V R D RG+ FV T A+ L+
Sbjct: 304 YVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFVKMDTHENAANAICQLS 357
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 358 GYNVNGRPLKCSWGKDR 374
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 12 ENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVV 71
EN++GR G+ L+VN++ + A+ FKLFVG L VT E L Q F ++G V
Sbjct: 97 ENMNGRLVYGKELKVNWTHDSQSD----AKGSFKLFVGGLHTEVTNEILYQNFAKFGRVS 152
Query: 72 GARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
ARVL +SG+S+GYGFV + K + ETA++ +NG +++GR ++V+
Sbjct: 153 DARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVN 199
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 5 EDCNAVIENLDGREYLGRILRVNF---SDKPKPKLPL--------YAETDFKLFVGNLSW 53
ED ++ ++G + GR ++VN+ + KP + + T+ ++VG +
Sbjct: 177 EDAETAMQMMNGEKIQGRTVKVNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGGIPK 236
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
++ + F ++G ++ +++ + + YGFV + + A+ LNG +L G
Sbjct: 237 ETEESTMRKLFGDFGEIIDLKIM---RTDAEKAYGFVRFVSHDNATKAIMMLNGYQLNG 292
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+ V L SV L++ F G+VV +++ D ++G YGF+ + E A E++
Sbjct: 41 VHVAGLHESVDETLLSRIFSIVGHVVSCKIMKD-KTGTHARYGFIEFIDHTTAEFAKENM 99
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG + G+ ++V+ +S
Sbjct: 100 NGRLVYGKELKVNWTHDSQS 119
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W ++L Q FQE+GNV A V+ D ++GRSRG+GFV YS+ E A+++
Sbjct: 3 KLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMDN 62
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+N VE +GR +RV A RR
Sbjct: 63 MNDVEFDGRRIRVDKASDRRQ 83
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 40 AETD-FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
++TD F+ F+G L+WS + L AF++YG +V A+V+ D SGRSRG+GFV + K M
Sbjct: 224 SDTDEFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAM 283
Query: 99 ETALESLNGVELEGRAMRVSLAQ 121
E A+E++NG++L+GR + V AQ
Sbjct: 284 EEAIEAMNGIDLDGRTITVDKAQ 306
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 20 LGRILRVNFSDKPKPKL-PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 78
+G LR + P L P+ + KLFVG LS++ +L AF E+GNV+ AR++ D
Sbjct: 7 IGNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIID 66
Query: 79 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ESGRSRG+GF+ +++ E A+ S++G EL+GR +RV+ A R
Sbjct: 67 RESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ ++R+N++ + + LP E + LFVG+LS V E+L AF+
Sbjct: 108 DANIALQTLNGKQIENNVVRINWAFQSQQALP--DENTYNLFVGDLSVDVDDETLCNAFR 165
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+ + + V++D ++G SRGYGFV + + + + A++S+ EL GR +R++ A R +
Sbjct: 166 SFPSFIQGHVMWDMQTGGSRGYGFVSFGDQEQAQLAMDSMQSQELNGRPLRINWASKREN 225
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+T E L Q FQ G + +V+ D + R+ Y FV Y + A
Sbjct: 54 SDRVLYVGNLDKSITEEVLRQYFQVGGQISNVKVMIDKNNARA-NYAFVEYFKSHDANIA 112
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E +R++ A
Sbjct: 113 LQTLNGKQIENNVVRINWA 131
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 61/84 (72%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ AE +++ FVG L+W+ T +SL +AF +YG ++ ++++ D E+GRSRG+GFV ++ +
Sbjct: 1 MAAEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A++ +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ E+L +AF +YG +V ++++ D E+GRSRG+GFV ++ + M
Sbjct: 2 ADVEYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMN 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG +L+GR + V+ AQ
Sbjct: 62 DAIEAMNGQDLDGRNITVNQAQ 83
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 20 LGRILRVNFSDKPKPKL-PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 78
+G LR + P L P+ + KLFVG LS++ +L AF E+GNV+ AR++ D
Sbjct: 7 IGNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIID 66
Query: 79 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ESGRSRG+GF+ +++ E A+ S++G EL+GR +RV+ A R
Sbjct: 67 RESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ F+G LSWS T SL AF+ YG+++ A+V++D E+ RSRG+GFV + + ME A+
Sbjct: 4 EFRCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAI 63
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
++ ELEGR++ VS A+ RS
Sbjct: 64 RKMHNQELEGRSITVSKAEPPRS 86
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 57/76 (75%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL+W+ + SL AF ++G+V+ A V+ D E+GRSRG+GF+ + +A+ A+E+
Sbjct: 9 KLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEA 68
Query: 105 LNGVELEGRAMRVSLA 120
LNG EL+GR +RV+ A
Sbjct: 69 LNGQELDGREIRVNYA 84
>gi|255945479|ref|XP_002563507.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588242|emb|CAP86342.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 95
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW + ESL QAF E+G +V + V+ D E+GRSRG+GFV YS+ E E A+ +
Sbjct: 3 KIYVGNLSWHTSDESLRQAFGEFGQIVDSIVMVDRETGRSRGFGFVTYSSAEEAEAAINA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN +L+GR +RV+LA R
Sbjct: 63 LNEQDLDGRRIRVNLANAR 81
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 68/113 (60%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +AE + AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQK 262
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 104
L+VG L VT + L Q F+ G+VV +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQT 152
Query: 105 LNGVELEGRAMRVSLA 120
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ FV + +A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFVKMDSHENAASAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G + G+ +R+N++ + + ++ F LFVG+L+ V E+L+ AF
Sbjct: 135 DANVALQTLNGIQIEGKTVRINWAFQSQQTTN--SDDTFNLFVGDLNVDVDDETLSHAFD 192
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + V A V++D ++GRSRGYGFV ++ + + + A+ + G+ + GRA+R++ A R
Sbjct: 193 QFPSYVQAHVMWDMQTGRSRGYGFVSFADQEQAQEAMNVMQGMPINGRAVRINWATKR 250
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+ + L Q FQ G + +++ D + + Y F+ Y + A
Sbjct: 81 SDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVD-KKNNNVNYAFIEYLKSHDANVA 139
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG+++EG+ +R++ A
Sbjct: 140 LQTLNGIQIEGKTVRINWA 158
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G +S+S +SL +AF +YG VV AR++ D E+GRSRG+GF+ Y++ E +A+++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLSW+ T E+L Q F E+G V + ++ D ++GR+RG+GFV +ST+ + A+++
Sbjct: 3 KLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV++A R
Sbjct: 63 LNEQELDGRRIRVNVANAR 81
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+++ NLSWS E L +AF +G + V+ D ++GRSRG+GFV Y+ E +ALES
Sbjct: 6 KIYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSALES 65
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+N VEL+GR +RV+ A R S
Sbjct: 66 MNEVELDGRRIRVNYAHARSS 86
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ F+G LSWS T SL AF+ YG+++ A+V++D E+ RSRG+GFV + + ME A+
Sbjct: 4 EFRCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAI 63
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
++ ELEGR++ VS A+ RS
Sbjct: 64 RKMHNQELEGRSITVSKAEPPRS 86
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGR RG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RVS+AQ R
Sbjct: 99 MDGQELQGRNIRVSIAQER 117
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+ SL +AF +YGNVV AR++ D E+GRSRG+GFV Y++ E +A+++
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 101 LDGQDLHGRRVRVNYATER 119
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSWS SL AF+++G V+ A+V+ D ++G+SRG+GFV +S+ E E A +
Sbjct: 4 KLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAKGA 63
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LN +L+GR +RV A R S
Sbjct: 64 LNQTDLDGREIRVDSASDRDS 84
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ D++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVDYRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E ++G EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMSGKELDGRNITVNEAQSRRS 89
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 56/76 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL+W+ + SL AF ++G+VV A V+ D E+GRSRG+GF+ + +A A+E+
Sbjct: 33 KLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIEA 92
Query: 105 LNGVELEGRAMRVSLA 120
LNG EL+GR +RV+ A
Sbjct: 93 LNGQELDGREIRVNYA 108
>gi|219885617|gb|ACL53183.1| unknown [Zea mays]
Length = 275
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKLPLYAETDFKLFVGNLSW 53
MSTVE+ + IE + GR+L VN + ++P+ + F+ +VGNL W
Sbjct: 156 MSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQF----APAFRAYVGNLPW 211
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
V L Q F E+G VV A+V+YD E+GRSRG+GFV +K E+ A+ +L+G
Sbjct: 212 QVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDG 265
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL + V +E L Q F + G V A V+Y+ E+G+SRG+GFV ST E + A+E
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 105 LNGVELEGRAMRVSLAQGR 123
+ ++ GR + V+ A R
Sbjct: 169 FSRYDISGRLLNVNRASSR 187
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 62/93 (66%)
Query: 31 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 90
P+P P +E +KLFVGNLS+ + +L +AF+ +G +V + V+ + E+G+SRG+GFV
Sbjct: 17 PPRPTSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFV 76
Query: 91 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
Y K E + A+ ++ EL+GR +RV+ A+ R
Sbjct: 77 VYEQKHEADAAISRMDNAELDGRTLRVNFARPR 109
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNLSW E+L F +YG V+ AR+ + +SGRSRG+GFV S++ E+ A+ES
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIES 84
Query: 105 LNGVELEGRAMRVSLA 120
L+G + +GR +RV+LA
Sbjct: 85 LDGADYDGRELRVNLA 100
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-DKPKPK 35
+S+ + NA IE+LDG +Y GR LRVN + DKP P+
Sbjct: 72 LSSETEVNAAIESLDGADYDGRELRVNLAGDKPPPR 107
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 59/81 (72%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ T + L QAF+ +G+V+ ++V+ D E+GRSRG+GF+ ++ + M A+
Sbjct: 1 EFRCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAI 60
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
+ +NG EL+GR + V+ AQ R
Sbjct: 61 KEMNGKELDGRNITVNQAQSR 81
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L QAF E+G V+ + V+ D ++GRSRG+GFV +S+ E + A+
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGG 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR ++V+LA R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG +L+GR + V+ AQ
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +SL AF +YG+V+ ++++ D E+GRSRG+GFV +++ M
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG +L+GR + V+ AQ
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQ 83
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 57/81 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D ++FVG L WS++ E L Q F +YG VV ARV+ D E+GRSRG+GF+ Y+ + ++ +
Sbjct: 4 DNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECI 63
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
+L+G +L+GR +RV+ A R
Sbjct: 64 AALDGQDLQGRTIRVNKAMTR 84
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD--FKLFVGNLSWSVTTESLTQA 63
D N ++ L+G + + L++N++ + + AE D F LFVG+L+ V E+L
Sbjct: 110 DANVALQTLNGVQLENKTLKINWAFETQQA----AENDDTFNLFVGDLNVDVDDETLAGT 165
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
F+E+ + A V++D ++GRSRGYGFV +S + E + A++++ G +L GR +R++ A R
Sbjct: 166 FREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATKR 225
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+T + L Q FQ G + +++ D ++ Y FV Y + A
Sbjct: 56 SDRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKN-EYVNYAFVEYIRSHDANVA 114
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNGV+LE + ++++ A
Sbjct: 115 LQTLNGVQLENKTLKINWA 133
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+W+ +L AF +YG+VV ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEFRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 64 DAIEGMNGQDLDGRSITVNEAQ 85
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 68/113 (60%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++NL+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 144 MQNLNGRRVHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSV 203
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 204 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 256
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQNL 147
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV +R D RG+ F+ + A+ LN
Sbjct: 306 YVGNLTPYTTQNDLVPLFQNFGYVVESRFQSD------RGFAFIKLDSHENAAMAICQLN 359
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 360 GYNVNGRPLKCSWGKDK 376
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 20 LGRILRVNFSDK---------PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+G ILR S + P + + KLF+G LS+S SL +AF +YG V
Sbjct: 7 VGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEV 66
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ ARV+ D E+GRSRG+GFV +++ E +A+++L+G +L GR +RV+ A R
Sbjct: 67 IEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 18/137 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------PKLPLYAETDFKLFV 48
M +VE+ I DG + GR ++VNF + P+ + ++ KL+V
Sbjct: 151 MGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYV 210
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
NLSW++T++ L AF + + A+V+YD SGRSRG+GF+ +S+ M++AL+++N V
Sbjct: 211 ANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMKSALDTMNEV 270
Query: 109 ------ELEGRAMRVSL 119
E+ R +SL
Sbjct: 271 VRIHSDEVSWRPFGISL 287
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL +S+T+ L++ F E G V ++YD + RSRG+ FV + E + A+
Sbjct: 104 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 163
Query: 105 LNGVELEGRAMRVSLAQGRR 124
+G ++ GR ++V+ + R
Sbjct: 164 FDGSQVGGRTVKVNFPEVPR 183
>gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana]
Length = 546
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 17/133 (12%)
Query: 1 MSTVEDCNAVIENLDGREYL-------GRILRVNFSDKP---KPKLPL-------YAETD 43
M +VED NAV+E L+G GR ++VN ++KP P L + + ++
Sbjct: 122 MKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITEKPIASSPDLSVLQSEDSAFVDSP 181
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
+K++VGNL+ +VT E L F E G VV A+V + +S G+GFV +S++ ++E A+
Sbjct: 182 YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIV 241
Query: 104 SLNGVELEGRAMR 116
+LN LEG+ +R
Sbjct: 242 ALNNSLLEGQKIR 254
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 30 DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGF 89
+KP P +E ++++GN+ +VT E LT+ +E+G V +V+YD SGRSR +GF
Sbjct: 63 EKPAALDP-SSEAARRVYIGNIPRTVTNEQLTKLVEEHGAV--EKVMYDKYSGRSRRFGF 119
Query: 90 VCYSTKAEMETALESLNGVEL-------EGRAMRVSLAQ 121
+ + +E LNG L EGR ++V++ +
Sbjct: 120 ATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITE 158
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 59/86 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+E +++ FVG L+W+ E L + F ++G+V+ ++++ D ESGRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ R S
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQSRGS 87
>gi|425781927|gb|EKV19861.1| hypothetical protein PDIG_00280 [Penicillium digitatum PHI26]
gi|425784024|gb|EKV21834.1| hypothetical protein PDIP_02540 [Penicillium digitatum Pd1]
Length = 98
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW + ESL AF E+GN+V + V+ D E+GRSRG+GFV +S+ E E A+ +
Sbjct: 3 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSAEEAEAAINA 62
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LN +L+GR +RV+LA R S
Sbjct: 63 LNEQDLDGRRIRVNLANARPS 83
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 60/81 (74%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E +++ F+G LSWS + L +AF+++G++V A+V+ D SGRSRG+GFV + K M+
Sbjct: 4 EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDE 63
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A++++NG++L+GR++ V AQ
Sbjct: 64 AIKAMNGMDLDGRSITVDKAQ 84
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+W+ T +SL++AF +YG V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQTLDGRNVTVNEAQ 85
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ E+L AF +G V+ ++V+ D E+GRSRG+GFV +S++ M
Sbjct: 4 ADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSML 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG EL+GR + V+ AQ
Sbjct: 64 DAIENMNGKELDGRNITVNQAQ 85
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L +AF +YG VV + V+ D ++GRSRG+GFV +S++ E A+ +
Sbjct: 4 KVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAISA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN E EGR ++V+ A R
Sbjct: 64 LNEQEFEGRRIKVNFANAR 82
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF YG + V+ D E+GRSRG+GFV ++T+ E + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV++A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +F+ FVG L+W+ SL AF +G V+ ++++ D E+GRSRG+GFV +S + M
Sbjct: 4 AEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMM 63
Query: 100 TALESLNGVELEGRAMRVSLAQGR 123
A+E++NG EL+GR + V+ AQ R
Sbjct: 64 DAIEAMNGKELDGRNITVNQAQSR 87
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 60/84 (71%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ AE +++ FVG L+W+ +SL +AF YG V+ ++++ D E+GRSRG+GFV +S++
Sbjct: 1 MDAEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A+E +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIEGMNGQDLDGRNITVNEAQ 84
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +F+ FVG L+W+ ++L +AF ++G +V ++V+ D E+GRSRG+GFV ++T+ M
Sbjct: 4 AEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ E +++ F+G LSWS + L +AF+++G+++ A+V+ D SGRSRG+GFV + K
Sbjct: 1 MSEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
ME A+E +NG++L+GR + V AQ
Sbjct: 61 MEEAIEEMNGMDLDGRTITVDKAQ 84
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G+VV ARV+ D +SGRSRG+GFV +S A+++
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR +RV +AQ R
Sbjct: 99 MDGQELQGRNIRVRIAQER 117
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D + ++ L+G++ L++N++ + + ++ F LF+G+L+ V E+L AF+
Sbjct: 128 DASIALKTLNGKQIENNTLKINWAFQSQQNTT--SDETFNLFIGDLNVDVDDETLVAAFK 185
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + A V++D ++GRSRGYGFV +S + + A++++ G EL GR +R++ A R
Sbjct: 186 DFKSFIQAHVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTMQGSELNGRQLRINWASKR 243
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+ + L Q FQ G + +V+ D Y FV YS + A
Sbjct: 75 SDKILYVGNLDKSINEDILKQYFQVGGPITNVKVIND--KNNEANYAFVEYSQHHDASIA 132
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 133 LKTLNGKQIENNTLKINWA 151
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+LFVG LSW +SL +AF +G+VV A+V+ D +SGRSRG+GFV +S + + A+ +
Sbjct: 40 RLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNA 99
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L GR +RV+LAQ R
Sbjct: 100 MDGQQLHGRNIRVNLAQER 118
>gi|367016631|ref|XP_003682814.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
gi|359750477|emb|CCE93603.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
Length = 402
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ ++++N++ + + P E F LFVG+L+ V E+L AF+
Sbjct: 96 DANIALQTLNGKQIENNVVKINWAFQSQQVSP--DEATFNLFVGDLNVDVDDETLRNAFK 153
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
E+ + V++D ++G SRGYGFV + ++ E + A++++ G EL GR +R++ A
Sbjct: 154 EFPTYLQGHVMWDMQTGGSRGYGFVSFGSQEEAQKAMDAMQGHELNGRPLRINWA 208
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+ E L Q FQ G + +++ D ++ + Y FV Y + A
Sbjct: 42 SDKVLYVGNLDTSINEEILKQYFQVGGPIANVKIMVD-KNNSNANYAFVEYFQSHDANIA 100
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 101 LQTLNGKQIENNVVKINWA 119
>gi|255718453|ref|XP_002555507.1| KLTH0G10912p [Lachancea thermotolerans]
gi|238936891|emb|CAR25070.1| KLTH0G10912p [Lachancea thermotolerans CBS 6340]
Length = 436
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N + LDG++ ++++N++ + + + +E F LFVG+L+ V E+L + F+
Sbjct: 119 DANVAFQTLDGKQIENHVIKINWAFQSQQ---VSSEDTFNLFVGDLNVDVDDETLARTFK 175
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ + A V++D ++GRSRGYGFV + + + + A+E G + GRA+R++ A R
Sbjct: 176 DIPTFIQAHVMWDMQTGRSRGYGFVSFGEQTQAQKAMEDNQGAVVNGRAIRINWASKR 233
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL +VT E L Q FQ G++ ++L D ++ + Y FV + + A
Sbjct: 65 SDRILYVGNLDLAVTEEMLKQYFQVGGSIANVKILMD-KNNKQANYAFVEFHQPHDANVA 123
Query: 102 LESLNGVELEGRAMRVSLA 120
++L+G ++E ++++ A
Sbjct: 124 FQTLDGKQIENHVIKINWA 142
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 139 MQTLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSV 198
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 199 SEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 251
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT E L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 142
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 143 NGRRVHQSEIRVNWA 157
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +
Sbjct: 300 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDSHENAAMAICQM 353
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + GR ++ S + +
Sbjct: 354 NGYNVNGRPLKCSWGKDK 371
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 20 LGRILRVNFSDKPKPKLPLYAE----TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARV 75
+G ++R S P + + +LFVG LSW +SL AF +G V A+V
Sbjct: 7 IGSLIRQTVSQNSAPIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKV 66
Query: 76 LYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+ D E+GRSRG+GFV + +AL S++GVEL GR++RVS AQ
Sbjct: 67 ITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQ 112
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAF 64
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF
Sbjct: 52 HDANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAF 108
Query: 65 QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A
Sbjct: 109 KDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 164
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + AL++L
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 61
Query: 106 NGVELEGRAMRVSLA 120
NG ++E ++++ A
Sbjct: 62 NGKQIENNIVKINWA 76
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSWS T + L QAF YG + V+ D +SGRSRG+GFV + T+ E + A+ +
Sbjct: 3 KVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV++A R
Sbjct: 63 LNEQELDGRRIRVNMANSR 81
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G +S+S +SL +AF +YG VV AR++ D E+GRSRG+GF+ Y++ E +A+++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG +S+S +SL +AF +YG V+ ARV+ D E+GRSRG+GFV Y++ E +A+++
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 104 LDGQDLHGRRVRVNYANDR 122
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 152 MQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSV 211
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E + AL S++G L RA+R + A +
Sbjct: 212 SEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQK 264
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE---SGRSRGYGFVCYSTKAEMETAL 102
L+VG L VT + L Q F+ G+VV +++ D + + YGFV + E A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAERAM 152
Query: 103 ESLNGVELEGRAMRVSLA 120
++LNG + +RV+ A
Sbjct: 153 QTLNGRRIHQSEIRVNWA 170
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ FV + +A+ LN
Sbjct: 314 YVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFVKMDSHENAASAICQLN 367
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 368 GYNVNGRPLKCSWGKDR 384
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 70/107 (65%), Gaps = 4/107 (3%)
Query: 12 ENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVV 71
+N+DGR GR L+VN+S + + + ++K+FVG L V + L + FQ++G V
Sbjct: 101 DNMDGRVVYGRELKVNWSYTAQQE----NQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVT 156
Query: 72 GARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
ARVL ++G+S+GYGFV + K + ETA++ +NG +LEGR ++V+
Sbjct: 157 DARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVN 203
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 5 EDCNAVIENLDGREYLGRILRVNF------SDKPKPKLP---LYAETDFK---LFVGNLS 52
ED ++ ++G + GR ++VN+ S +PK + ET + +++GN+
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCTVYIGNIP 240
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+V ++ L Q EYG++ R+ + +GY F+ +S +A+ NG + G
Sbjct: 241 KNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSKHESATSAILMCNGKIING 294
Query: 113 RAMRVSLAQGRRS 125
+R S GR S
Sbjct: 295 STLRCSW--GRES 305
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 19 YLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 78
Y R + N ++ LP+ A + + V + SV L + F G+VV +++ D
Sbjct: 19 YQQRPPQQNSTETTDSSLPINANSK-SVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRD 77
Query: 79 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+SG GYGFV + A ++++G + GR ++V+ +
Sbjct: 78 -KSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWS 118
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +L AF +YG+VV ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR++ V+ AQ
Sbjct: 64 DAIEGMNGQELDGRSITVNEAQ 85
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ T ++L AF +YG +V ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 70/107 (65%), Gaps = 4/107 (3%)
Query: 12 ENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVV 71
+N+DGR GR L+VN+S + + + ++K+FVG L V + L + FQ++G V
Sbjct: 101 DNMDGRVVYGRELKVNWSYTAQQE----NQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVT 156
Query: 72 GARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
ARVL ++G+S+GYGFV + K + ETA++ +NG +LEGR ++V+
Sbjct: 157 DARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVN 203
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 5 EDCNAVIENLDGREYLGRILRVNF------SDKPKPKLP---LYAETDFK---LFVGNLS 52
ED ++ ++G + GR ++VN+ S +PK + ET + +++GN+
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEINNETSSQNCTVYIGNIP 240
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+V ++ L Q EYG++ R+ + +GY F+ +S +A+ NG + G
Sbjct: 241 KNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSKHESATSAILMCNGKIING 294
Query: 113 RAMRVSLAQGRRS 125
+R S GR S
Sbjct: 295 STLRCSW--GRES 305
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR + +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 128 MQTLNGRRVHQQEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 187
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 188 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQK 240
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 71 LYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPD-KNFQSKGFNYGFVEYDDPGAAERAMQ 129
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + + +RV+ A
Sbjct: 130 TLNGRRVHQQEIRVNWA 146
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V R D RG+ F+ T A+ L+
Sbjct: 291 YVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAANAICQLS 344
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + R
Sbjct: 345 GYQVNGRPLKCSWGKDR 361
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQGRR 124
A+E +NG EL+GR + V+ AQ RR
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQFRR 88
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + +TA++++ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG +S+S +SL +AF +YG V+ ARV+ D E+GRSRG+GFV Y++ E +A+++
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 104 LDGQDLHGRRVRVNYANDR 122
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 59/81 (72%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ FVG L+W +SL AF+ +G ++ A+V+ D E+GRSRG+GFV ++T+ M+ A+
Sbjct: 3 EYRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAI 62
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
++NG +++GR + V++AQ R
Sbjct: 63 NAMNGKDIDGRTISVNMAQAR 83
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + +TA++++ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 143 MQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSV 202
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 203 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 255
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 88 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 146
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 147 NGRRVHQSEIRVNWA 161
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +N
Sbjct: 305 YVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKMDSHESAAMAICQMN 358
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 359 GYNVNGRPLKCSWGKDK 375
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNLSW SL AF ++G VV + VL D E+GRSRG+GFV +S+ A+++
Sbjct: 12 KVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAVDA 71
Query: 105 LNGVELEGRAMRVSLAQGR 123
+NG +L GR +RV+LA R
Sbjct: 72 MNGQDLNGRNIRVNLANER 90
>gi|110739563|dbj|BAF01690.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
Length = 84
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL W V L Q F E+G VV ARV+YD E+GRSRG+GFV S E+ A+ +L
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 106 NGVELEGRAMRVSLAQGR 123
+G LEGRA+RV+ A+ R
Sbjct: 61 DGQNLEGRAIRVNGAEER 78
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 59/79 (74%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ F+G LSWS + SL +AF+++G++V A+V+ D SGRSRG+GFV + K ME A+
Sbjct: 6 EYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+ ++G++L+GR++ V AQ
Sbjct: 66 KEMHGMDLDGRSITVDKAQ 84
>gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
gi|297321966|gb|EFH52387.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
Length = 467
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 11/117 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKP----KPKLPL-------YAETDFKLFVG 49
M +VED NAV+E L+G GR ++VN ++KP P L L + ++ +K++VG
Sbjct: 124 MKSVEDANAVVEKLNGNTVEGREIKVNITEKPIASSSPDLSLLQSEDSAFVDSPYKVYVG 183
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
NL+ +VT E L F E G VV A+V + +S G+GFV +S++ ++E A+ +LN
Sbjct: 184 NLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAILALN 240
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+E ++++GN+ +VT E LT+ +E+G V +V+YD SGRSR +GF + +
Sbjct: 72 SEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDAN 131
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+E LNG +EGR ++V++ +
Sbjct: 132 AVVEKLNGNTVEGREIKVNITE 153
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+S SL +AF +YG V+ ARV+ D E+GRSRG+GFV +++ E +A+++
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 101 LDGQDLHGRRVRVNYATDR 119
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +L QAF +YG VV ++++ D E+GRSRG+GFV +S + M
Sbjct: 4 ADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMN 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|414884784|tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 82/129 (63%), Gaps = 10/129 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK---------PKPKLPLYAETDFKLFVGNL 51
MST E+ NA +E L+G E R ++VN ++ P+P+ L+ ++ +K++VGNL
Sbjct: 117 MSTAEEANAAVEALNGTEVGDRKIKVNVTESFLPNIDRSAPEPEA-LFVDSQYKVYVGNL 175
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
+ +VTTE L F E GN++ A V + + +S+GYGFV +S++ E+E A+ + N ELE
Sbjct: 176 AKTVTTEVLKNFFSEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELE 235
Query: 112 GRAMRVSLA 120
G+ +RV+ A
Sbjct: 236 GQLIRVNRA 244
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+ +VT + L F +G V A V+YD + RSR +GFV ST E A+E+
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E+ R ++V++ +
Sbjct: 130 LNGTEVGDRKIKVNVTE 146
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG+L+W+V + L QAF E+ N+ ARV+ D E GRSRG+G+V +S + ALE+
Sbjct: 228 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 287
Query: 106 NGVELEGRAMRVSLAQGRR 124
NG ELEGR M + + G+R
Sbjct: 288 NGTELEGRNMNIDFS-GKR 305
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL---------PLYAETDF 44
S E A +E +G E GR + ++FS D P + L E+D
Sbjct: 274 FSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPESD- 332
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
LFVGN+S+ + +++ F R+ D ESG +G+G+V +S+ + + AL
Sbjct: 333 TLFVGNISFEMDQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDAKKALSE 392
Query: 105 LNGVEL----EGRAMRVSLAQGR 123
LNG L GRA+R+ A R
Sbjct: 393 LNGQYLGEGSSGRAVRLDYAGQR 415
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 59/85 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR + V+ AQ RRS
Sbjct: 65 AIEGMNGKELDGRNITVNEAQSRRS 89
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +F+ FVG L+W+ E+L +AF +YG ++ ++++ D E+GRSRG+GFV + ++ M
Sbjct: 4 AEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +F+ FVG L+W+ E+L +AF +YG ++ ++++ D E+GRSRG+GFV + ++ M
Sbjct: 4 AEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+++S +++ F EYG+++G R+ D ESGR +G
Sbjct: 325 NFGDQKSP------ESD-TLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKG 377
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ESLNG EL GRAMR+ + R++
Sbjct: 378 FGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 416
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E L F+E+G + G R++ D +SGRS+G+G+V ++ + A +
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 106 NGVELEGRAMRVSLAQGR 123
EL+GR + V A R
Sbjct: 293 KDTELDGRKLNVDFANAR 310
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 308
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLP------LYAETDFKLFVGNL 51
M++ E+ A I+ D + GRI+ V+F+ KP PK P +T KL+V NL
Sbjct: 142 MASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNL 201
Query: 52 SWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
+W + L + F N V ARV++ GRS GYGFV ++T+ E E A+ LNG E+
Sbjct: 202 AWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEI 261
Query: 111 EGRAMRVSLA 120
GR + + +
Sbjct: 262 MGRPITLKFS 271
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV NL WS++ +++ F + G V ++ + G++RG+ FV ++ E + A++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 105 LNGVELEGRAMRVSLAQ 121
+ ++ GR + VS A+
Sbjct: 155 FDTFQVSGRIISVSFAR 171
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+E +++ FVG L+W+ E L + F ++G+V+ ++++ D ESGRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+E +++ FVG L+W+ E L + F ++G+V+ ++++ D ESGRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+WS SL +AF YG VV ++++ D E+GRSRG+GFV ++ + M
Sbjct: 4 ADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A++++NG L+GR++ V+ AQ
Sbjct: 64 DAIDAMNGKMLDGRSITVNPAQ 85
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF +G + V+ D E+GRSRG+GFV ++T+ E + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV++A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG LSW SL +AF ++G V ++++ D E+GRSRG+GFV ++ + M
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A++ +NG EL+GR++ V+ AQ
Sbjct: 62 DAIDEMNGKELDGRSITVNEAQ 83
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G +S+S +SL +AF +YG VV AR++ D E+GRSRG+GF+ Y++ E +A+++
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 144 MQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSV 203
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 204 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 256
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 147
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +N
Sbjct: 306 YVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKMDSHESAAMAICQMN 359
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 360 GYNVNGRPLKCSWGKDK 376
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE ++ FVG L+W+ T +L AF YG V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYSCFVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG EL+GR++ V+ AQ R S
Sbjct: 62 DAIEGMNGQELDGRSITVNEAQARGS 87
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+++S +++ F EYG+++G R+ D ESGR +G
Sbjct: 341 NFGDQRSP------ESD-TLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKG 393
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ESLNG EL GRAMR+ + R++
Sbjct: 394 FGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 432
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E L F+E+G + G R++ D +SGRS+G+G+V ++ + A +
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 106 NGVELEGRAMRVSLAQGR 123
EL+GR + V A R
Sbjct: 309 KDTELDGRKLNVDFANAR 326
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 60/82 (73%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +E+L +AF +YG ++ ++++ D E+GRSRG+GFV ++ + M
Sbjct: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +++GR + V+ AQ
Sbjct: 64 DAIEGMNGQDMDGRNITVNEAQ 85
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 144 MQTLNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSV 203
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 204 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 256
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 89 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 147
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +N
Sbjct: 306 YVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKMDSHESAAMAICQMN 359
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 360 GYNVNGRPLKCSWGKDK 376
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 16/124 (12%)
Query: 8 NAVIENLDGREYLGRILRV-NFSDKPK---------PKLPLYAETDF----KLFVGNLSW 53
NA+ +N G E+ GR ++V +++PK P+ A +F K+ + +L+W
Sbjct: 60 NALEKN--GAEFDGRTIKVEKATERPKRDQKENKDRPQHEQAAPKEFIDTNKIIITSLAW 117
Query: 54 SVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
SV +SL QAF +YGN+ VL D +SG+SRG G V ++T+ M+ A+E +NG ELEGR
Sbjct: 118 SVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEEMNGTELEGR 177
Query: 114 AMRV 117
A+ V
Sbjct: 178 AIAV 181
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+ V L +S +L FQE G + +RV+ + E+ +SRG+GFV ++++A ALE
Sbjct: 5 KVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNALEK 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
NG E +GR ++V A R
Sbjct: 65 -NGAEFDGRTIKVEKATER 82
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+++S +++ F EYG+++G R+ D ESGR +G
Sbjct: 341 NFGDQRSP------ESD-TLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKG 393
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ESLNG EL GRAMR+ + R++
Sbjct: 394 FGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 432
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E L F+E+G + G R++ D ++GRS+G+G+V ++ + A +
Sbjct: 249 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEFTNAEDAVKAHAAK 308
Query: 106 NGVELEGRAMRVSLAQGR 123
EL+GR + V A R
Sbjct: 309 KDTELDGRKLNVDFANAR 326
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 54/76 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W+ T+++L F E+G V A V+ D E+GRSRG+GFV +S++ E A+E+
Sbjct: 3 KLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIEA 62
Query: 105 LNGVELEGRAMRVSLA 120
+N E EGR +RVS A
Sbjct: 63 MNEQEFEGRQIRVSEA 78
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 12 ENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVV 71
+N+DGR GR L+VN+S + + + +K+FVG L V + L + FQ++G V
Sbjct: 101 DNMDGRVVYGRELKVNWSYTAQQE----NQGSYKIFVGGLQPEVNDDLLYKTFQKFGRVT 156
Query: 72 GARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
ARVL ++G+S+GYGFV + K + ETA++ +NG +LEGR ++V+
Sbjct: 157 DARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMMNGEKLEGRNIKVN 203
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 5 EDCNAVIENLDGREYLGRILRVNF------SDKPKPKLP---LYAETDFK---LFVGNLS 52
ED ++ ++G + GR ++VN+ S +PK + ET + +++GN+
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEINNETSIQNCTVYIGNIP 240
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+V ++ L Q EYG++ R+ + +GY F+ +S +A+ NG + G
Sbjct: 241 KNVESDDLKQLLAEYGSIEEVRL------NKDKGYAFIKFSKHESATSAILMCNGKIING 294
Query: 113 RAMRVSLAQGRRS 125
+R S GR S
Sbjct: 295 STLRCSW--GRES 305
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 19 YLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD 78
Y R + N ++ +P +P+ A + + V + SV L + F G+VV +++ D
Sbjct: 19 YQQRPPQQNPTETTEPPIPINANSK-SVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRD 77
Query: 79 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+SG GYGFV + A ++++G + GR ++V+ +
Sbjct: 78 -KSGTHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWS 118
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 161
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L Q F YG V V+ D E+GRSRG+GFV Y + E E A+ +
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N EL+GR +RV++A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+W+ +L +AF +G +V ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+E +NG L+GR + V+ AQ RRS
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQSRRS 89
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 59/79 (74%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ F+G LSWS + SL +AF+++G++V A+V+ D SGRSRG+GFV + K ME A+
Sbjct: 6 EYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+ ++G++L+GR++ V AQ
Sbjct: 66 KEMHGMDLDGRSITVDKAQ 84
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG LSWS+ E L + F+ G VVGARV+ + +GRSRGYG+V + KA E ALE +
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEM 187
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + V ++ +
Sbjct: 188 QGKEIDGRPINVDMSNSK 205
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 10 VIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-------------LFVGNLSWSVT 56
+E + G+E GR + V+ S+ KP P D LF+GNLS+
Sbjct: 183 ALEEMQGKEIDGRPINVDMSNS-KPAAPAARNNDRASQYGDKRSPPSDTLFLGNLSFQAD 241
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
++L + F ++GNV R+ E+ + +G+G+V +S+ E ALE+LNG ++ R +R
Sbjct: 242 RDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGEYVDNRPIR 301
Query: 117 VSLAQGR 123
+ + R
Sbjct: 302 LDYSTPR 308
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L Q F YG V V+ D E+GRSRG+GFV Y + E E A+ +
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N EL+GR +RV++A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L Q F YG V V+ D E+GRSRG+GFV Y + E E A+ +
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N EL+GR +RV++A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 2 STVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLT 61
ST D N ++ L+G + + +++N++ + + L +T F LF+G+L+ +V +L
Sbjct: 79 STNHDANVALQTLNGIQIENKNIKINWAFQSQTNL--NDDTSFNLFIGDLNVNVDDTTLA 136
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
AF+ + A V++D ++ RSRGYGFV + T + A++ + G E+ GRA+R++ A
Sbjct: 137 NAFKSCPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGHEINGRAIRINWAT 196
Query: 122 GR 123
R
Sbjct: 197 KR 198
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L++GNL S+ ++L Q FQ G +V +V+ D ++ Y F+ YST + A
Sbjct: 29 SDKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDKKNNHV-NYAFIEYSTNHDANVA 87
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG+++E + ++++ A
Sbjct: 88 LQTLNGIQIENKNIKINWA 106
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 143 MQTLNGRRIHQAEIRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSV 202
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 203 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQK 255
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT E L Q F+ G+V +++ D S + YGF+ Y E A+++L
Sbjct: 88 LYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNS-KGYNYGFIEYDDPGAAERAMQTL 146
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 147 NGRRIHQAEIRVNWA 161
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 305 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLS 358
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 359 GYNVNGRPLKCSWGKDR 375
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ AE ++ FVG L+W+ T +L+ AF YG VV ++++ D E+GRSRG+GFV + +
Sbjct: 1 MAAEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M+ A+ +NG EL+GR + V+ AQ
Sbjct: 61 MKDAISGMNGQELDGRNITVNEAQ 84
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 147 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 206
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 207 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 259
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 150
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 151 NGRRVHQSEIRVNWA 165
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ FV T A+ LN
Sbjct: 309 YVGNLTPYTTQNDIVPLFQNFGFVVESRFQAD------RGFAFVKMDTHENAAMAICQLN 362
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 363 GYNVNGRPLKCSWGKDK 379
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 54/76 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSWSV +SL AF +G+V R++YD +SGR+RG+GFV +S + ++A ++
Sbjct: 37 KLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDA 96
Query: 105 LNGVELEGRAMRVSLA 120
++G L GR +R++ A
Sbjct: 97 MDGKALLGRPLRINFA 112
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 65/107 (60%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 127
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 128 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 174
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 151 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 210
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 211 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 264
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 265 TIEGHVVK 272
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G VV ARV+ D ++G+SRG+GFV +S + + A+ S
Sbjct: 38 KLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSS 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G ELEGR + V+ A R
Sbjct: 98 MDGQELEGRNIHVNFANER 116
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 12/128 (9%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNF-------SDKPKPKLPLYAETDFKLFVGNLSWSV 55
T ED +V+ +G E G +++N+ S P+LPLY +FVG+LS V
Sbjct: 124 TREDAESVLTAFNGSEVGGSSIKINWAYQLSTISTSSSPELPLYT-----IFVGDLSAEV 178
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
E+L +AF ++ + A V++D ++ RSRGYGFV ++ AE E AL ++ G+ + GRA+
Sbjct: 179 DDETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAI 238
Query: 116 RVSLAQGR 123
R + A R
Sbjct: 239 RCNWASHR 246
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGN+ +V + L + F + +V ++L+D ++ Y FV + T+ + E+ L +
Sbjct: 80 LYVGNIPKTVNEQYLHELFDKTKSV---KLLHD-KNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 106 NGVELEGRAMRVSLA 120
NG E+ G +++++ A
Sbjct: 136 NGSEVGGSSIKINWA 150
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E LTQAF +G+V
Sbjct: 127 MQTLNGRRVHQSEIRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSAFGSV 186
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 187 SEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 239
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 72 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAAERAMQTL 130
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 131 NGRRVHQSEIRVNWA 145
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +
Sbjct: 288 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENASMAICQM 341
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG + GR ++ S + + S
Sbjct: 342 NGYNVNGRPLKCSWGKDKTS 361
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ AE ++ FVG L+W+ T +L+ AF YG VV ++++ D E+GRSRG+GFV + +
Sbjct: 1 MAAEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M+ A+ +NG EL+GR + V+ AQ
Sbjct: 61 MKEAISGMNGSELDGRNITVNEAQ 84
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ T +SL++AF +YG ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQTLDGRNITVNEAQ 85
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQK 262
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V+ +++ D S+G YGFV + E A++
Sbjct: 92 LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERAMQ 151
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 152 TLNGRRIHQSEIRVNWA 168
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G V+ R+ D RG+ F+ T +A+ LN
Sbjct: 312 YVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKMDTHENAASAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 127 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 183
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 184 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 73 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 131
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 132 LQTLNGKQIENNIVKINWA 150
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ T ++L AF +YG ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 142 MTTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 201
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+RV+ A +
Sbjct: 202 SEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQK 254
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE---SGRSRGYGFVCYSTKAEMETAL 102
L+VG L VT + L Q F+ G+VV +++ D S + YGFV Y E A+
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAERAM 142
Query: 103 ESLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 143 TTLNGRRVHQAEIRVNWA 160
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ F+ T A+ L+
Sbjct: 304 YVGNLTPYTTQADLVPLFQNFGYVVETRFQSD------RGFAFIKMDTHENAAMAICQLS 357
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 358 GYNVNGRPLKCSWGKDR 374
>gi|302414816|ref|XP_003005240.1| gar2 [Verticillium albo-atrum VaMs.102]
gi|261356309|gb|EEY18737.1| gar2 [Verticillium albo-atrum VaMs.102]
Length = 437
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG+L+W+V + L QAF E+ N+ ARV+ D E GRSRG+G+V +S + ALE+
Sbjct: 179 LFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEAK 238
Query: 106 NGVELEGRAMRVSLAQGRR 124
NG ELEGR M + + G+R
Sbjct: 239 NGTELEGRNMNIDFS-GKR 256
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPKPKL---------PLYAETDF 44
S E A +E +G E GR + ++FS D P + L E+D
Sbjct: 225 FSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPESD- 283
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
LFVGN+S+ + +++ F R+ D ESG +G+G+V +S+ + + AL
Sbjct: 284 TLFVGNISFEMDQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDAKKALSE 343
Query: 105 LNGVEL----EGRAMRVSLAQGR 123
LNG L GRA+R+ A R
Sbjct: 344 LNGQYLGEGSSGRAVRLDYAGQR 366
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+ V +SL AF +G+VV A+V+ D +SGRSRG+GFV +S +AL +
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSA 96
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L+GR++RVS A R
Sbjct: 97 MDGKDLDGRSIRVSYANDR 115
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 65/107 (60%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 127
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 128 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 174
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 151 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 210
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 211 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 264
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 265 TIEGHVVK 272
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ T + L +AF +YG ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A++ +NG +L+GR + V+ AQ
Sbjct: 62 DAIDGMNGQDLDGRNITVNEAQ 83
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV +SL QAF ++G V A+V+ D E+GRS+G+GFV + AE + A+
Sbjct: 4 KLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAING 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
+NG LEGRA+ V+ A+ R
Sbjct: 64 MNGQPLEGRAIVVNEARPR 82
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ AE +++ FVG L+W+ T + L +AF +YG ++ ++++ D E+GRSRG+GFV + +
Sbjct: 1 MSAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A++ +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ AE +++ FVG L+W+ T + L +AF +YG ++ ++++ D E+GRSRG+GFV + +
Sbjct: 1 MSAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A++ +NG +L+GR + V+ AQ
Sbjct: 61 MRDAIDGMNGQDLDGRNITVNEAQ 84
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P +A ++ KLFVG LSWSV +SL +AF +G+V ++YD +SGRSRG+GFV +S +
Sbjct: 32 PSHASSN-KLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNED 90
Query: 97 EMETALESLNGVELEGRAMRVSLA 120
+ + A ++++G L GR +R++ A
Sbjct: 91 DAKCAKDAMDGKALLGRPLRINFA 114
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR + +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 140 MQTLNGRRVHQQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 199
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGF + + E E AL S++G L RA+R + A +
Sbjct: 200 SEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQK 252
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY--GFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+GY GFV Y E A++
Sbjct: 83 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPD-KNFQSKGYNYGFVEYDDPGAAERAMQ 141
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + + +RV+ A
Sbjct: 142 TLNGRRVHQQEIRVNWA 158
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T L FQ +G V R D RG+ F+ T A+ L
Sbjct: 301 VYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAANAICQL 354
Query: 106 NGVELEGRAMRVSLAQGR 123
+G ++ GR ++ S + R
Sbjct: 355 SGYQVNGRPLKCSWGKDR 372
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 57/78 (73%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++ FVG LSWS + +L AF ++G+++ A+V+ D ++GRSRG+GFV + K ME A++
Sbjct: 7 YRCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAID 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
S++G+ L+GR++ V A+
Sbjct: 67 SMHGMSLDGRSITVDRAR 84
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 149 MQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 208
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 209 SEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQK 261
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 104
L+VG L VT + L Q F+ G+V+ +++ D + + YGFV + E A+++
Sbjct: 92 LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAMQT 151
Query: 105 LNGVELEGRAMRVSLA 120
LNG + +RV+ A
Sbjct: 152 LNGRRIHQSEIRVNWA 167
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G V+ R+ D RG+ F+ T +A+ LN
Sbjct: 311 YVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKMDTHENAASAICQLN 364
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 365 GYNVNGRPLKCSWGKDR 381
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+W+ T SL +AF YG+++ ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G++ I+++N++ + + ++ F LFVG+L+ +V E+L AF+
Sbjct: 128 DANIALQTLNGKQIENNIVKINWAFQSQQS---SSDDTFNLFVGDLNVNVDDETLRNAFK 184
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ + + V++D ++G SRGYGFV ++++ + + A++S+ G +L GR +R++ A R
Sbjct: 185 DFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 242
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL ++T + L Q FQ G + +++ D ++ ++ Y FV Y + A
Sbjct: 74 SDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIA 132
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG ++E ++++ A
Sbjct: 133 LQTLNGKQIENNIVKINWA 151
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 65/107 (60%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + + F +FVG+LS +TTE + AF +G + A
Sbjct: 85 MNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 144
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 145 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 191
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 168 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 227
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 228 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 281
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 282 TIEGHVVK 289
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF G+V
Sbjct: 197 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 256
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 257 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 309
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 359 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 412
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 413 GYNVNGRPLKCSWGKDR 429
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ T +L +AF +YG V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+W+ T +SL++AF +YG V+ ++V+ D E+GRSRG+GFV + + M+
Sbjct: 4 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+ +NG L+GR + V+ AQ
Sbjct: 64 DAIVGMNGQTLDGRNITVNEAQ 85
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ E +++ F+G LSWS + L + F+++G+++ A+V+ D SGRSRG+GFV + K
Sbjct: 1 MSEELEYRCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
ME A+E +NG++L+GR + V AQ
Sbjct: 61 MEDAIEGMNGMDLDGRTITVDKAQ 84
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V + LTQAF +G+V
Sbjct: 125 MQTLNGRRVHQSEIRVNWAYQANSSGKEDTSGHFHIFVGDLSNEVNDDILTQAFSAFGSV 184
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 185 SEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 237
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+++L
Sbjct: 70 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAADRAMQTL 128
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 129 NGRRVHQSEIRVNWA 143
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +
Sbjct: 286 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENASMAICQM 339
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + GR ++ S + +
Sbjct: 340 NGYNVNGRPLKCSWGKDK 357
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E LT+ F+E+G + G R++ D +SGRS+G+G+V + + ALE+
Sbjct: 247 LFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAK 306
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG EL+ RA+R+ + R++
Sbjct: 307 NGAELDNRAIRLDFSVPRQN 326
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 29/142 (20%)
Query: 4 VEDCNAVIENLDGREYLGRILRVNFS----------------------DKPKPKLPLYAE 41
ED +E +G E R +R++FS DK +E
Sbjct: 296 AEDAAKALEAKNGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQQYGDK-------ASE 348
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
LFVGNLS+ T + + + F+E+G++ G R+ D ESG +G+G+V + E + A
Sbjct: 349 PSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEAKAA 408
Query: 102 LESLNGVELEGRAMRVSLAQGR 123
E+L G +L GR MR+ + R
Sbjct: 409 YEALQGADLGGRPMRLDYSTPR 430
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G++
Sbjct: 150 MQTLNGRRVHQNEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSI 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 262
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 95 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPD-KNHRGYNYGFVEYDDPGAAERAMQTL 153
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 154 NGRRVHQNEIRVNWA 168
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R+ D RG+ F+ + A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFQNFGYVVECRMQAD------RGFAFIKMDSHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYMVNGRPLKCSWGKDR 382
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+S SL +AF +YG V+ ARV+ D E+GRSRG+GFV +++ E +A+++
Sbjct: 41 KLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 101 LDGQDLHGRRVRVNYATDR 119
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+ +++ FVG L+W+ T +L++AF +YG VV ++++ D E+GRSRG+GFV + + M
Sbjct: 2 GDVEYRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ T ++L +AF ++G ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF G+V
Sbjct: 195 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 254
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 255 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 307
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 357 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 410
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 411 GYNVNGRPLKCSWGKDR 427
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL +AF ++G V+ ARV+ D ++GRSRG+GFV +++ E +AL +
Sbjct: 41 KLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTA 100
Query: 105 LNGVELEGRAMRVSLA 120
L+G +L GR +RV+ A
Sbjct: 101 LDGQDLHGRQIRVNYA 116
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEYRCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E++NG +L+GR++ V+ AQ
Sbjct: 64 DAIEAMNGQDLDGRSITVNEAQ 85
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 263
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRVHQSEIRVNWA 169
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 313 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 367 GYNVNGRPLKCSWGKDR 383
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 149 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 208
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 209 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 261
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D S + YGFV Y E A+++L
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMQTL 152
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 311 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 364
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 365 GYNVNGRPLKCSWGKDR 381
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL AF+++G VV A+V+ D ++G+SRG+GFV +++ E E A +
Sbjct: 4 KLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAKNA 63
Query: 105 LNGVELEGRAMRVSLA 120
LN EL+GR +RV A
Sbjct: 64 LNQTELDGREIRVDSA 79
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 263
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRVHQSEIRVNWA 169
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 313 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 367 GYNVNGRPLKCSWGKDR 383
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 61/86 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG L+W ++L +AF YG++V ++V+ D E+GRSRG+GFV ++++ M+
Sbjct: 4 ADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQGRRS 125
A+ +NG +L+GR + V+ AQ R S
Sbjct: 64 DAIAGMNGQDLDGRNITVNEAQTRAS 89
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ FVG L+W+ +SL QAF ++G + +++ D E+GRSRG+GFV +S+ M+ A+
Sbjct: 4 EYRCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAI 63
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E +NG +L+GR + V+ AQ
Sbjct: 64 EGMNGQDLDGRNITVNEAQ 82
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 141 MQTLNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 200
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 201 SEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 253
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT E L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 86 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 144
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 145 NGRRVHQSEIRVNWA 159
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +
Sbjct: 302 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQM 355
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + GR ++ S + +
Sbjct: 356 NGYNVNGRPLKCSWGKDK 373
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF G+V
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 273
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGF+ Y E A++
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 163 TLNGRRVHQSEIRVNWA 179
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 323 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 376
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 377 GYNVNGRPLKCSWGKDR 393
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ E +++ FVG L+WS + L F+++G + A+V+ D SGRSRG+GFV Y K
Sbjct: 1 MSDEDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKV 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
ME A++++NG++L+GR + V AQ
Sbjct: 61 MEDAIDAMNGIDLDGRTITVDRAQ 84
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 150 MATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDGEWLGSRAIRCNWANQK 262
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 99
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 88 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYDDPGAAE 147
Query: 100 TALESLNGVELEGRAMRVSLA 120
+ +LNG + +RV+ A
Sbjct: 148 RGMATLNGRRIHNNEIRVNWA 168
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ + L FQ +G V R D RG+ F+ T A+ LN
Sbjct: 312 YVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF G+V
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 273
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGF+ Y E A++
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 163 TLNGRRVHQSEIRVNWA 179
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 323 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 376
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 377 GYNVNGRPLKCSWGKDR 393
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG LSW SL AF+ +G V A+V+ D ++GRSRG+GFV ++ + A+E
Sbjct: 4 KIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEE 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
++GVEL+GR +RV+ AQ R
Sbjct: 64 MDGVELDGRNIRVNEAQER 82
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 60/93 (64%)
Query: 31 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 90
+P L + K+F+G +S+ L +AF +YGNVV AR++ D ++GRSRG+GFV
Sbjct: 27 RPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFV 86
Query: 91 CYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
Y++ E +A+++++G +L GR +RV+ A R
Sbjct: 87 TYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A +++ FVG L+W+ +L +AF YGN+V ++++ D E+GRSRG+GFV ++++ M+
Sbjct: 4 AYVEYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ A+ +++ FVG L+W+ T +SL +AF YG ++ ++++ D E+GRSRG+GFV ++ +
Sbjct: 1 MSADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKS 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A++ +N EL+GR + V+ AQ
Sbjct: 61 MRDAIQGMNSQELDGRNITVNEAQ 84
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF G+V
Sbjct: 160 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 219
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 220 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 272
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG---RSRG--YGFVCYSTKAEMET 100
L+VG L VT + L Q F+ G+V +++ D + +S+G YGF+ Y E
Sbjct: 99 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAAER 158
Query: 101 ALESLNGVELEGRAMRVSLA 120
A+++LNG + +RV+ A
Sbjct: 159 AMQTLNGRRVHQSEIRVNWA 178
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 322 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 375
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 376 GYNVNGRPLKCSWGKDR 392
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +F+ FVG L+W+ ++L +AF +G ++ ++++ D E+GRSRG+GFV +S + M
Sbjct: 4 AEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV ESL AF ++G V A+V+ D E+GRS+G+GFV T AE + A+
Sbjct: 4 KLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAING 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
+NG LEGRA+ V+ A+ R
Sbjct: 64 MNGQPLEGRAVVVNEARPR 82
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T ESL +AF +YGN+ V+ D E+GRSRG+GFV Y + + ALE
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG ++GR +RV A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P +E LFVG LSW+V E L + F+E G V+ ARV+ + +G+SRGYG+V +S+KA
Sbjct: 174 PEASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFSSKA 233
Query: 97 EMETALESLNGVELEGRAMRVSLAQGR 123
E AL L G E++GR + + ++ G+
Sbjct: 234 AAEKALNELQGKEIDGRPVNLDMSTGK 260
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 10 VIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------LFVGNLSWSVTTE 58
+ L G+E GR + ++ S KPK P + K LF+GNLS++
Sbjct: 238 ALNELQGKEIDGRPVNLDMSTG-KPKTPASNDRAKKFGDVPSAPSDTLFIGNLSFNTERN 296
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
L + F EYG VV R+ ++ + +G+G+V +S+ E + AL SLNG L+GR R+
Sbjct: 297 KLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNALNSLNGEYLDGRPCRLD 356
Query: 119 LAQGR 123
+ R
Sbjct: 357 FSTPR 361
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D++ FVG+LSW+ T L AF ++G V +V+ D SGRSRG+GFV + K ME A+
Sbjct: 6 DYRCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAV 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E++NG++L+GR + V AQ
Sbjct: 66 EAMNGIDLDGRNITVERAQ 84
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 68/113 (60%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL +++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQK 262
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 104
L+VG L VT + L Q F+ G+V +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 105 LNGVELEGRAMRVSLA 120
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L F +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR + +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 141 MQTLNGRRVHQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 200
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 201 SEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQK 253
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGY--GFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+GY GFV Y E A++
Sbjct: 84 LYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPD-KNFQSKGYNYGFVEYDDPQCAERAMQ 142
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + + +RV+ A
Sbjct: 143 TLNGRRVHQQEIRVNWA 159
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V R D RG+ FV T A+ L+
Sbjct: 303 YVGNLTPYTTQNDLVPLFQNFGYVTETRFHSD------RGFAFVKMDTHENAANAICQLS 356
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 357 GYNVNGRPLKCSWGKDR 373
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 116 MATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPV 175
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 176 SEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQK 228
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 99
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 54 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 113
Query: 100 TALESLNGVELEGRAMRVSLA 120
+ +LNG + +RV+ A
Sbjct: 114 RGMATLNGRRIHNNEIRVNWA 134
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ + L FQ +G V R D RG+ F+ T A+ LN
Sbjct: 278 YVGNLTPYTSQADLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLN 331
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 332 GYNVNGRPLKCSWGKDR 348
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G V
Sbjct: 147 MQTLNGRRVHQSEIRVNWAYQSNNQPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQV 206
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 207 SEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQK 259
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L +T + L Q F+ G+VV +++ D +S+G YGFV Y E A++
Sbjct: 89 LYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERAMQ 148
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 149 TLNGRRVHQSEIRVNWA 165
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ F+ T A+ LN
Sbjct: 309 YVGNLTPYTTQSDLVPLFQNFGYVVETRFQSD------RGFAFIKMDTHENAAMAICQLN 362
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 363 GYNVNGRPLKCSWGKDR 379
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 148 MATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPV 207
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 208 SEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQK 260
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 99
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 86 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 145
Query: 100 TALESLNGVELEGRAMRVSLA 120
+ +LNG + +RV+ A
Sbjct: 146 RGMATLNGRRIHNNEIRVNWA 166
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ + L FQ +G V R D RG+ F+ T A+ LN
Sbjct: 310 YVGNLTPYTSQADLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLN 363
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 364 GYNVNGRPLKCSWGKDR 380
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 145 MQTLNGRRVHQAEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 204
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 205 SEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 257
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 90 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGSAERAMQTL 148
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 149 NGRRVHQAEIRVNWA 163
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV +R D RG+ F+ T A+ LN
Sbjct: 307 YVGNLTPYTTQNDLVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQLN 360
Query: 107 GVELEGRAMRVSLAQGRRS 125
G + GR ++ S Q +++
Sbjct: 361 GYNVNGRPLKCSTPQAQQA 379
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ F+G L+WS + L AF++YG++V A+V+ D SGRSRG+GF+ + K M+
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+ ++NG++L+GR + V AQ
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL+WS E L QAF ++G V A V+ D ESGRSRG+ FV ++ E A
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRG 150
Query: 105 LNGVELEGRAMRVSLAQ 121
L+G EL GRA+RV+ Q
Sbjct: 151 LDGTELAGRAIRVNFPQ 167
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 25/144 (17%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPK------------------------PKL 36
M++ + LDG E GR +RVNF +PK P+
Sbjct: 138 MASPDAAEKARRGLDGTELAGRAIRVNFP-QPKGERAPRAERGERSERSERSERTYTPRG 196
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
A +L+VGNL WS+ L F E+G V ARV+ D +SGRSRG+ FV ST
Sbjct: 197 DGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPE 256
Query: 97 EMETALESLNGVELEGRAMRVSLA 120
E A+ +L+G E+ GR +RV+LA
Sbjct: 257 EANEAMANLDGEEIGGRTIRVNLA 280
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 68/113 (60%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL +++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQK 262
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 104
L+VG L VT + L Q F+ G+V +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 105 LNGVELEGRAMRVSLA 120
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L F +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 59/79 (74%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ FVG L+W+ +++L +AF YG +V ++V+ D E+GRSRG+GFV ++++ M+ A+
Sbjct: 7 EYRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAI 66
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E +NG L+GR++ V+ AQ
Sbjct: 67 EGMNGQNLDGRSITVNEAQ 85
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L+QAF +G+V
Sbjct: 153 MQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSV 212
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 213 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 265
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +
Sbjct: 314 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMESHEAAAMAICQM 367
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + GR ++ S + +
Sbjct: 368 NGYNVNGRPLKCSWGKDK 385
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G++
Sbjct: 147 MQTLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSI 206
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 207 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 259
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 92 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 150
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 151 NGRRVHQSEIRVNWA 165
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ T A+ LN
Sbjct: 309 YVGNLTPYTTQTDIVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQLN 362
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 363 GYNVNGRPLKCSWGKDK 379
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +F+ FVG LSWS SL AF +G V+ ++V+ D E+GRSRG+GFV + + M
Sbjct: 4 ADVEFRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 64 DAIEGMNGRDLDGRNITVNRAQ 85
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G+V
Sbjct: 163 MQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSV 222
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 223 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 275
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV +R D RG+ F+ T A+ LN
Sbjct: 325 YVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLN 378
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + +
Sbjct: 379 GYQVNGRPLKCSWGKDK 395
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVL--------------YDGESGRSRGYGFVC 91
L+VG L VT + L Q F+ G+V +++ +D + + YGFV
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSPEQPHDAQQQKGYNYGFVE 152
Query: 92 YSTKAEMETALESLNGVELEGRAMRVSLA 120
Y E A+++LNG + +RV+ A
Sbjct: 153 YDDPGAAERAMQTLNGRRVHQSEIRVNWA 181
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ SL +AF +YG+V+ ARV+ D ++GRSRG+GF+ + + E +AL++
Sbjct: 41 KLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQA 100
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G +L GR +RV+ A +R
Sbjct: 101 MDGQDLHGRRIRVNYATEKR 120
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
F+ F+G L+WS + L F+++G ++ A+V+ D SGRSRG+GFV + K M+ A++
Sbjct: 7 FRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAID 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
++NG++L+GR + V AQ
Sbjct: 67 AMNGIDLDGRTITVDRAQ 84
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL +AF +G V ARV+ D E+GRSRG+GFV +S + + + A S
Sbjct: 38 KLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASS 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL+GR++RV+ A R
Sbjct: 98 MDGQELDGRSVRVNFANER 116
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G +
Sbjct: 135 MQTLNGRRVHQSEIRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTI 194
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV Y +++ E AL +++G L RA+R + A +
Sbjct: 195 SEARVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAIRCNWANQK 247
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+VV +++ D ++ + YGFV Y E A+++L
Sbjct: 80 LYVGGLDPRVTDDILRQIFETTGHVVSVKIIPD-KNAKGFNYGFVEYDDPGAAERAMQTL 138
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 139 NGRRVHQSEIRVNWA 153
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T L FQ +G +V R D RG+ F+ T A+ L
Sbjct: 296 VYVGNLTPYTTQNDLLPLFQNFGYIVETRFQAD------RGFAFIKMDTHENAAMAICQL 349
Query: 106 NGVELEGRAMRVSLAQGR 123
+G + GR ++ S + R
Sbjct: 350 SGYNVNGRPLKCSWGKDR 367
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ +SL +AF ++G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 4 AEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 157 MATLNGRRVHQSEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 216
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 217 SEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQK 269
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 102 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMATL 160
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 161 NGRRVHQSEIRVNWA 175
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 319 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLS 372
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 373 GYNVNGRPLKCSWGKDR 389
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W+ T +SL AF +YG V V+ D E+GRSRG+GFV S A E A+E+
Sbjct: 22 KLFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIEA 81
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN +L+GR +RV A R
Sbjct: 82 LNNGDLDGRQVRVDKAADR 100
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF G+V
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQK 273
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D ++ +S+G YGF+ Y E A++
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 163 TLNGRRVHQSEIRVNWA 179
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 323 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 376
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 377 GYNVNGRPLKCSWGKDR 393
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ +SL +AF ++G ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 4 AEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+ V +SL AF +G+VV A+V+ D +SGRSRG+GFV +S +AL +
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSA 96
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR++RVS A + S
Sbjct: 97 MDGKDLNGRSIRVSYANDKPS 117
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%)
Query: 10 VIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGN 69
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+
Sbjct: 55 AMQTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 114
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
V ARV++D ++GRSRGYGFV + +A+ E AL S++G L RA+R + A
Sbjct: 115 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWA 165
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 20 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 79
+G +L+ S P + + KLFVG LS+ +SL F YG V+ A+++ D
Sbjct: 7 IGNLLKRATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDR 66
Query: 80 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
E+GRSRG+GF+ Y++ E A+ +L+G +L+GR +RV+ A R
Sbjct: 67 ETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G+V
Sbjct: 148 MQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSV 207
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 208 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 260
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPD-KNQKGYNYGFVEYDDPGAAERAMQTL 151
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 152 NGRRVHQSEIRVNWA 166
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV +R D RG+ F+ T A+ LN
Sbjct: 310 YVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLN 363
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + +
Sbjct: 364 GYQVNGRPLKCSWGKDK 380
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++ FVG+LSWS T L AF ++G V +V+ D SGRSRG+GFV + K ME A+E
Sbjct: 7 YRCFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVE 66
Query: 104 SLNGVELEGRAMRVSLAQ 121
++NG++L+GR + V AQ
Sbjct: 67 AMNGIDLDGRNITVERAQ 84
>gi|380483681|emb|CCF40465.1| cutinase negative acting protein [Colletotrichum higginsianum]
Length = 401
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 4 VEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQA 63
VE+ + + LD G+ R + SDK LFVG+L+W+V SL +A
Sbjct: 179 VEEPSKKRKALDEPVIPGKKARTDISDK-----------SSTLFVGSLAWAVDDNSLYEA 227
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
FQE+ ++ GARV+ D +GRSRG+G+V ++T ALE G EL GRAM + +
Sbjct: 228 FQEFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDFS 284
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-DKP----KPKLPLY-----------AETDF 44
+T E A +E GRE GR + ++FS KP P+ + E+D
Sbjct: 256 FATPEAAAAALEGSQGRELAGRAMNIDFSGQKPAGEGNPQARAFDRAQKHGDTVSPESD- 314
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
LFVGNL + V +++ F E V R+ D ESG +G+G+V +++ + +TA
Sbjct: 315 TLFVGNLPFDVDQDTVRAFFSEAAEVTSVRLPTDPESGNLKGFGYVSFNSIDDAKTAFAQ 374
Query: 105 LNG 107
LNG
Sbjct: 375 LNG 377
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQK 262
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD---GESGRSRG--YGFVCYSTKAEMET 100
L+VG L VT + L Q F+ G+V +++ D G +++G YGFV Y E
Sbjct: 89 LYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGAAER 148
Query: 101 ALESLNGVELEGRAMRVSLA 120
A+++LNG + +RV+ A
Sbjct: 149 AMQTLNGRRVHQAEIRVNWA 168
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 312 YVGNLTPYTTQNDLIPLFQNFGFVVETRFQAD------RGFAFVKMDTHENAAMAICQLS 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 366 GYNVNGRPLKCSWGKDK 382
>gi|365983576|ref|XP_003668621.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
gi|343767388|emb|CCD23378.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
Length = 499
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQ 65
D N ++ L+G + +I+++N++ + + L + F LFVG+L+ V E+L+ F+
Sbjct: 139 DANVALQTLNGIQIENKIIKINWAFQSQQNLN--SNDTFNLFVGDLNIDVDDETLSSNFK 196
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ + + A V++D ++ RSRGYGFV ++ + + + A++++ G E+ GR +R++ A R
Sbjct: 197 NFPSYIQAHVMWDMQTSRSRGYGFVSFADRDQAQNAMDTMQGKEINGRPIRINWATKR 254
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
+D L+VGNL S+ + L Q FQ G + +++ D + ++ Y FV Y + A
Sbjct: 85 SDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVD-KKNQNVNYAFVEYLKSHDANVA 143
Query: 102 LESLNGVELEGRAMRVSLA 120
L++LNG+++E + ++++ A
Sbjct: 144 LQTLNGIQIENKIIKINWA 162
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ + + FVG L+W+ ++L +AF +YG +V ++++ D E+GRSRG+GFV ++ + M
Sbjct: 2 ADVEDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMN 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+E++NG +L+GR + V+ AQ
Sbjct: 62 DVIEAMNGQDLDGRNITVNQAQ 83
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G+V
Sbjct: 158 MQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSV 217
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 218 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 270
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD-------GESGRSRG--YGFVCYSTKA 96
L+VG L VT + L Q F+ G+V +++ D E R +G YGFV Y
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDDPG 152
Query: 97 EMETALESLNGVELEGRAMRVSLA 120
E A+++LNG + +RV+ A
Sbjct: 153 AAERAMQTLNGRRVHQSEIRVNWA 176
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV +R D RG+ F+ T A+ LN
Sbjct: 320 YVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLN 373
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + +
Sbjct: 374 GYQVNGRPLKCSWGKDK 390
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 74/123 (60%), Gaps = 12/123 (9%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKP-------KPKLPLYAETDFKLFVGNLSWSVTT 57
ED + +L+G++ G ++VN++ + P+ P Y +FVG+LS V
Sbjct: 152 EDAEKALNSLNGKDVNGSDIKVNWAYQSAAIAGGSTPEEPSY-----NIFVGDLSSEVND 206
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
E+L +AF ++G++ A V++D ++ RSRGYGFV + + + E AL+S+NG L GRA+R
Sbjct: 207 EALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRC 266
Query: 118 SLA 120
+ A
Sbjct: 267 NWA 269
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL+ S + E + + F N + + L + ++ Y F+ ++ + E AL SL
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G ++V+ A
Sbjct: 162 NGKDVNGSDIKVNWA 176
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG+L W+V L + F + GNVV A+V+ D E+GRSRG+GFV ST E + A+++L
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 106 NGVELEGRAMRVSLAQGR 123
NG ++EGR + V++A+ R
Sbjct: 61 NGTDVEGRKIVVNIARPR 78
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 58/84 (69%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ A+ +++ FVG L+W+ T +SL +AF YG ++ ++++ D E+GRSRG+GFV ++ +
Sbjct: 1 MSADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKS 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A++ +N EL+GR V+ AQ
Sbjct: 61 MRDAIQGMNSQELDGRNTTVNEAQ 84
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL QAF +G V A V+ D E+GRSRG+GFV +S + A++
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+LA R S
Sbjct: 96 MDGKELNGRQIRVNLATERSS 116
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + + F +FVG+LS V E L QAF +G+V
Sbjct: 162 MQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSV 221
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 222 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 274
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV +R D RG+ F+ T A+ LN
Sbjct: 324 YVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKMDTHENAAMAICQLN 377
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + +
Sbjct: 378 GYQVNGRPLKCSWGKDK 394
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR-------------SRGYGFVCY 92
L+VG L VT + L Q F+ G+V +++ D G+ YGFV Y
Sbjct: 93 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYGFVEY 152
Query: 93 STKAEMETALESLNGVELEGRAMRVSLA 120
E A+++LNG + +RV+ A
Sbjct: 153 DDPGAAERAMQTLNGRRVHQSEIRVNWA 180
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ L +AF +YG+VV ++++ D E+GRSRG+GFV ++++ M
Sbjct: 4 ADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 61/79 (77%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG LS+ V ++L ++F +G+V+ A+++ D E+GRSRG+GFV +++ E A+E+
Sbjct: 40 KVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAVEA 99
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L+GR++RV++AQ R
Sbjct: 100 MDGKDLQGRSIRVNIAQER 118
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETD-FKLFVGNLSWSVTTESLTQAFQEYGN 69
++ L+GR +RVN++ + ++ F +FVG+LS V E LTQAF +G+
Sbjct: 142 MQTLNGRRVHQSEIRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGS 201
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
V ARV++D ++GRSRGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 202 VSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQK 255
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+++L
Sbjct: 87 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAADRAMQTL 145
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 146 NGRRVHQSEIRVNWA 160
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 35 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
+ P Y T +VGNL+ T + FQ +G VV +R D RG+ F+ +
Sbjct: 296 QTPAYQTT---CYVGNLTPYTTANDVVPLFQNFGYVVESRFQAD------RGFAFIKMDS 346
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQGRRS 125
A+ LNG + GR ++ S + + S
Sbjct: 347 HENAAQAICGLNGYNVNGRPLKCSWGKDKNS 377
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG LSW+ T + L + F+ +GNV+ A+V+ D E+G SRG+GFV + + ME A+
Sbjct: 6 EFRCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E L+G EL+GR + V+ A+
Sbjct: 66 ERLHGKELDGRPITVNRAK 84
>gi|452822390|gb|EME29410.1| RNA-binding protein [Galdieria sulphuraria]
Length = 106
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEY----GNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+LF+GNLSW ++E L +AFQ +VV A V+ D SGRSRG+GFV + + + +
Sbjct: 6 RLFIGNLSWKTSSEGLKRAFQNAIGVEASVVNAHVVMDRYSGRSRGFGFVTFESPEDAAS 65
Query: 101 ALESLNGVELEGRAMRVSLAQGR 123
A+ LNG EL+GRA+RV LA R
Sbjct: 66 AVNLLNGKELDGRAIRVDLAHER 88
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T ++L AF ++G V+ + V+ D E+GRSRG+GFV +ST E E +++
Sbjct: 5 KVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQ 64
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N L+GR +RV++A +
Sbjct: 65 MNEQPLDGRNIRVNMANAK 83
>gi|52076130|dbj|BAD46643.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076137|dbj|BAD46650.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|222642112|gb|EEE70244.1| hypothetical protein OsJ_30366 [Oryza sativa Japonica Group]
Length = 611
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 17/138 (12%)
Query: 1 MSTVEDCNAVIENLDGREYLG--RILRVNFSDK-PKPKLPL--------------YAETD 43
M+TV+ ++ D R +L +L V F+++ P+ + L ++ D
Sbjct: 467 MTTVQKPADIVAAFDKRGFLDLHPLLAVEFAEQQPRQEWILTEAALAIAPTTVHSFSPKD 526
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
F ++VGNL W V L + F E+G V+ A+V+ D ++GRSRG+GFV +T E + +
Sbjct: 527 FSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCDRQTGRSRGFGFVSMATLREPDDVIA 586
Query: 104 SLNGVELEGRAMRVSLAQ 121
SLNG ++GR MRVS A+
Sbjct: 587 SLNGQIMDGRPMRVSFAK 604
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+ V +SL AF YG VV ARV+ D ++GRSRG+GFV +++ +AL +
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSA 96
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR +RVS A R S
Sbjct: 97 MDGQDLNGRNIRVSYANDRPS 117
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W ++L Q F+E+G V A V+ D ++GRSRG+GFV Y+ AE + A+++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN E +GR +RV A R
Sbjct: 63 LNNEEFDGRRIRVDKASDR 81
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL QAF +G V A V+ D E+GRSRG+GFV +S + A++
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+LA R S
Sbjct: 96 MDGKELNGRQIRVNLATERSS 116
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%)
Query: 20 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 79
LG +L+ S P + + K+FVG LS++ L +AF YG+++ A+++ D
Sbjct: 7 LGNLLKKATSSNPTLYQAIRCMSSSKIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDH 66
Query: 80 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
ES RSRG+GF+ Y+ + + + A+ +L+G EL GR +RVS A R S
Sbjct: 67 ESRRSRGFGFITYAAEDQAKAAIMALDGKELHGRNIRVSEANERTS 112
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 7 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 66
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 67 SAIEGMNGKELDGRNITVNEAQ 88
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 7 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 66
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 67 SAIEGMNGKELDGRNITVNEAQ 88
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 8 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 67
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 68 SAIEGMNGKELDGRNITVNEAQ 89
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P AE K ++GNLS+SV ++L F Y NVV ++ D E+GR RG+GFV + +K
Sbjct: 2 PEMAEN--KCYIGNLSYSVDEQALEDKFHGY-NVVDVNIITDRETGRPRGFGFVTFGSKE 58
Query: 97 EMETALESLNGVELEGRAMRVSLAQGR 123
EME A++ +G +L+GR M+V+ AQ R
Sbjct: 59 EMEKAIDEFDGQDLDGRPMKVNKAQPR 85
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 149 MSTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 208
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 209 SEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQK 261
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMSTL 152
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 86 MQTLNGRRVHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 145
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 146 SEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQK 198
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + + FQ +G VV +R D RG+ FV T A+ LN
Sbjct: 248 YVGNLTPYTTQQDIVPLFQNFGFVVESRFQAD------RGFSFVKMDTHENAAMAICQLN 301
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 302 GYNVNGRPLKCSWGKDK 318
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 17 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 76
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+ A R S
Sbjct: 77 MDGKELNGRHIRVNPANDRPS 97
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 20 LGRILRVNFSDKPKPKLPLYAE------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
LG +LR N + P +P+ + KLFVG LSW +SL AF +G VV A
Sbjct: 7 LGGLLRQNIT--PIGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDA 64
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+V+ D E+GRSRG+GFV ++ + A+ ++G +L GR +RV++A R S
Sbjct: 65 KVIVDRETGRSRGFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANERPS 116
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 6 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 65
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 66 SAIEGMNGKELDGRNITVNEAQ 87
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Query: 40 AETD---FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
AE+D ++ FVG+LSW+ L AF +G ++ A+++ D E+GRSRG+GFV +S +
Sbjct: 2 AESDGAEYRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQ 61
Query: 97 EMETALESLNGVELEGRAMRVSLAQ 121
M+ A+E +NG EL+GR++ V+ AQ
Sbjct: 62 AMQDAIEGMNGKELDGRSIVVNEAQ 86
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 9 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 68
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 69 SAIEGMNGKELDGRNITVNEAQ 90
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS ++T+ + AF +G + A
Sbjct: 68 MNGRKILGKDMKVNWASTPSSQKKD-TSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
RV+ D +G+S+GYGF+ + K + E+A++ +NG L GR +R + A + S
Sbjct: 127 RVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPS 178
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPL------------YAE-------TDFKL 46
D + I+ ++G+ GR +R N++ + KP P Y E ++ +
Sbjct: 150 DAESAIQQMNGQWLGGRQIRTNWATR-KPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTV 208
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+ G ++ ++ + + Q F +G ++ RV + +GY FV + + A+ S+N
Sbjct: 209 YCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFDSHEGAAHAIVSVN 262
Query: 107 GVELEGRAMR 116
G +EG ++
Sbjct: 263 GTCIEGHTVK 272
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 141 MQTLNGRRVHQSEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 200
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 201 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 253
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 86 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 144
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 145 NGRRVHQSEIRVNWA 159
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +N
Sbjct: 303 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMN 356
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 357 GYNVNGRPLKCSWGKDK 373
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 20 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 79
+G +L+ S P + + KLFVG LS+ +SL F YG V+ A+++ D
Sbjct: 7 IGNLLKRATSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDR 66
Query: 80 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
E+GRSRG+GF+ Y++ E A+ +L+G +L+GR +RV+ A R
Sbjct: 67 ETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQK 263
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ + L FQ +G V+ R+ D RG+ F+ + A+ LN
Sbjct: 313 YVGNLTPYTSQNDLVPLFQNFGFVLETRLQAD------RGFAFIKMDSHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 367 GYNVNGRPLKCSWGKDR 383
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ + AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQK 262
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 92 LYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 151
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 152 TLNGRRIHQSEIRVNWA 168
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ F+ + A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFIKMDSHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG LS+ + LT+AF +YG VV ARV+ D ++GRSRG+GFV + + +A+++
Sbjct: 41 KVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
L+G +L+GR +R S A R S
Sbjct: 101 LDGQDLDGRRIRCSYATDRAS 121
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG LS+ + LT+AF +YG VV ARV+ D ++GRSRG+GFV + + +A+++
Sbjct: 41 KVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
L+G +L+GR +R S A R S
Sbjct: 101 LDGQDLDGRRIRCSYATDRAS 121
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG+L W+V L + F + GNVV A+V+ D E+GRSRG+GFV ST E + A+++L
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 106 NGVELEGRAMRVSLAQGR 123
NG ++EGR + V++A+ R
Sbjct: 61 NGADVEGRKIVVNIARPR 78
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%)
Query: 20 LGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDG 79
LG +L+ S P + + KLFVG LS++ SL AF YG ++ A+++ D
Sbjct: 7 LGGLLKKATSSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDR 66
Query: 80 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
++GRSRG+GF+ Y+ + + +A+ +L+G +L GR +RVS A R S
Sbjct: 67 DTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTS 112
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
gi|297325388|gb|EFH55808.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS---DKPKPKLPLY------AETDFKLFVGNL 51
M++ E+ A I+ D + GRI+ VNF+ KP PK P +T KL+V NL
Sbjct: 142 MASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPGDTRHKLYVSNL 201
Query: 52 SWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
+W + L + F N V ARV++ GRS GYGFV ++T+ E E A+ L+G E+
Sbjct: 202 AWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEAEDAIAKLDGKEI 261
Query: 111 EGRAM 115
GR +
Sbjct: 262 MGRPI 266
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV NL WS++ +++ F + G V ++ + G++RG+ FV ++ E + A++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 105 LNGVELEGRAMRVSLAQ 121
+ ++ GR + V+ A+
Sbjct: 155 FDTSQVSGRIISVNFAR 171
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T ESL +AF +YGN+ V+ D E+GRSRG+GFV Y + + AL+
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG ++GR +RV A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 65 AIEGMNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 65 AIEGMNGKELDGRNITVNEAQ 85
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV LSWSV +SL AF +G+V R++YD +SGRSRG+GFV +S + + +A ++
Sbjct: 39 KLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDA 98
Query: 105 LNGVELEGRAMRVSLA 120
++G GR +RVS A
Sbjct: 99 MDGKAFLGRPLRVSYA 114
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS ++T+ + AF +G + A
Sbjct: 68 MNGRKILGKDMKVNWASTPSSQKKD-TSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
RV+ D +G+S+GYGF+ + K + E+A++ +NG L GR +R + A + S
Sbjct: 127 RVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPS 178
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 26/130 (20%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPL------------YAE-------TDFKL 46
D + I+ ++G+ GR +R N++ + KP P Y E ++ +
Sbjct: 150 DAESAIQQMNGQWLGGRQIRTNWATR-KPSAPKSNNEGASSKHLSYEEVLNQSSPSNCTV 208
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+ G ++ ++ + + Q F +G ++ RV + +GY FV + + A+ S+N
Sbjct: 209 YCGGIASGLSDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFDSHEGAAHAIVSVN 262
Query: 107 GVELEGRAMR 116
G +EG ++
Sbjct: 263 GTCIEGHTVK 272
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 146 MQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 205
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 206 SEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQK 258
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D S + YGFV Y A E A+++L
Sbjct: 91 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNS-KGFNYGFVEYDDPAAAERAMQTL 149
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 150 NGRRVHQAEIRVNWA 164
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T L FQ +G VV R D RG+ FV T A+ L
Sbjct: 307 VYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQL 360
Query: 106 NGVELEGRAMRVSLAQGR 123
+G + GR ++ S + +
Sbjct: 361 SGYNVNGRPLKCSWGKDK 378
>gi|125549538|gb|EAY95360.1| hypothetical protein OsI_17193 [Oryza sativa Indica Group]
Length = 290
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 13 NLDGREYLGRILRVNFSD---KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGN 69
L+ + +GR +RV FS KP P P KL+V NL W ++ + ++ N
Sbjct: 139 KLNSLDVMGRTIRVEFSKSFRKPAPPPPGTILERHKLYVSNLPWKARAPNMKEFCSKF-N 197
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+ A+V++D SG+S GYGFV + TK E E AL L+G EL GR +R+ Q
Sbjct: 198 PLSAKVVFDSPSGKSAGYGFVSFGTKEEAEAALTELDGKELMGRPVRLRWRQ 249
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V N+ WS + + F + G V V+ G+ G+ +G+ FV +T E A+E
Sbjct: 81 KLYVANIPWSFPAPEIEKLFAQCGAVKDVEVIK-GKDGKKKGFAFVTMATAEEAAAAVEK 139
Query: 105 LNGVELEGRAMRVSLAQGRR 124
LN +++ GR +RV ++ R
Sbjct: 140 LNSLDVMGRTIRVEFSKSFR 159
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 24 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 83
+RVN++ + F +FVG+LS V E LTQAF +G+V ARV++D ++GR
Sbjct: 163 IRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGR 222
Query: 84 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
SRGYGFV + + E E AL S++G L RA+R + A +
Sbjct: 223 SRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQK 262
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT E L Q F+ G+V +++ D ++ R YGFV Y E A+++L
Sbjct: 84 LYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPD-KNARGYNYGFVEYDDPGAAERAMQTL 142
Query: 106 NG 107
NG
Sbjct: 143 NG 144
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +
Sbjct: 311 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDSHENAAMAICQM 364
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + GR ++ S + +
Sbjct: 365 NGYNVNGRPLKCSWGKDK 382
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 61 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 120
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 121 SAIEGMNGKELDGRNITVNEAQ 142
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV LSWSV +SL AF +G V R++YD +SGRSRG+GFV +S + E A ++
Sbjct: 26 KLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDA 85
Query: 105 LNGVELEGRAMRVSLA 120
++G L GR +R+S A
Sbjct: 86 MDGKALLGRPLRISFA 101
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 58/84 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ T ++L+ AF +Y VV ++++ D E+GRSRG+GFV + + M
Sbjct: 2 ADVEYRCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQGR 123
A+E +N +L+GR + V+ AQ R
Sbjct: 62 DAIEGMNRQDLDGRNITVNEAQSR 85
>gi|339626955|ref|YP_004718598.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|379008663|ref|YP_005258114.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
gi|339284744|gb|AEJ38855.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|361054925|gb|AEW06442.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
Length = 85
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL+WS T E L QAF ++ V+ AR++ D E+GRSRG+GFV + + + E A+E++
Sbjct: 5 LYVGNLAWSTTEEELAQAFAQHAQVISARIITDRETGRSRGFGFVEVADQ-DAEQAVEAM 63
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG +L GR + V+ A+ R+S
Sbjct: 64 NGTQLGGRDIIVNEARPRQS 83
>gi|388515725|gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK----------------PKPKLPLYAETDF 44
M ++ + I LDG + GR LRV FS + PK Y E
Sbjct: 150 MESINSAKSAIAALDGSDVGGRELRVKFSVEMSLERTDANANAGEMYASPKRTFYYEAPH 209
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL+ V E L F +GNV+ RVL+D + G++R Y F+ + ++AE + A+ S
Sbjct: 210 KLYVGNLARVVKPEQLRNHFIRFGNVLSVRVLHDRKQGKARVYAFLSFESEAERDAAM-S 268
Query: 105 LNGVELEGRAMRV 117
LNG E GR + V
Sbjct: 269 LNGTEFYGRTIVV 281
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+++V NL S L F+ YG ++ V + E+G SRG G+V + ++A+ +
Sbjct: 103 EIYVCNLPRSCNAAHLLDLFKPYGTIISVEVSRNAETGESRGCGYVIMESINSAKSAIAA 162
Query: 105 LNGVELEGRAMRVSLA 120
L+G ++ GR +RV +
Sbjct: 163 LDGSDVGGRELRVKFS 178
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGN+SW+V E LT+ F+E+G + G R++ D +SGRS+G+G+V +S + ALE+
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAK 303
Query: 106 NGVELEGRAMRVSLAQGR 123
NG EL+GR +R+ + R
Sbjct: 304 NGAELDGRELRLDFSTPR 321
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 2 STVEDCNAVIENLDGREYLGRILRVNFS-----------DKPKPKLPLYAETD----FKL 46
S ++ +E +G E GR LR++FS +K + + +T L
Sbjct: 291 SDPQNAKKALEAKNGAELDGRELRLDFSTPRTNDGPGAGNKSNDRAARFGDTTNAPAATL 350
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
FVGN+S+ ++T+ FQE+G + R+ D E+G +G+G+V S+ E + A +L
Sbjct: 351 FVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTALQ 410
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR +R+ A R
Sbjct: 411 GADIAGRPIRLDYAAER 427
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ F+G L+WS + L AF++YG+++ A+V+ D SGRSRG+GF+ + K M+
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+ ++NG++L+GR + V AQ
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 14 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 73
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 74 SAIEGMNGKELDGRNITVNEAQ 95
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 14 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 73
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 74 SAIEGMNGKELDGRNITVNEAQ 95
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +++ + AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 313 YVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 367 GYNVNGRPLKCSWGKDR 383
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 58/86 (67%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ A D ++FVG L WSV + L + F +YG VV ARV+ + E+GRSRG+GFV Y+ +
Sbjct: 1 MAAVEDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSS 60
Query: 98 METALESLNGVELEGRAMRVSLAQGR 123
+E + +L+G +++GR +RV+ A R
Sbjct: 61 VEECIAALDGQDMQGRTIRVNKAMSR 86
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV + L QAF E+G V A+V+ D ++GRS+G+GFV + AE + A+E
Sbjct: 4 KLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIEG 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
+NG L GRA+ V+ A+ R
Sbjct: 64 MNGQSLSGRAIVVNEARPR 82
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQ 85
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQ 85
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQ 85
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQ 85
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ F+G L+W+ + L AF++YG++V A+V+ D SGRSRG+GF+ + K M+
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+ ++NG++L+GR + V AQ
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +++ + AL S++G L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 262
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTKAEMETALES 104
L+VG L VT + L Q F+ G+VV +++ D + + YGFV + E A+++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQT 152
Query: 105 LNGVELEGRAMRVSLA 120
LNG + +RV+ A
Sbjct: 153 LNGRRIHQSEIRVNWA 168
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 312 YVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 366 GYNVNGRPLKCSWGKDR 382
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +++ + AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 313 YVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 367 GYNVNGRPLKCSWGKDR 383
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 167
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
+GNLSW+ ++L AF ++G V+ V+ D ESGRSRG+GFV + T E + A++ LN
Sbjct: 17 IGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLNE 76
Query: 108 VELEGRAMRVSLAQGR 123
+L+GR +RV+LA R
Sbjct: 77 QDLDGRRIRVNLANAR 92
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 67/113 (59%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +++ + AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+VV +++ D S+G YGFV + E A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 313 YVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKMDTHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 367 GYNVNGRPLKCSWGKDR 383
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 64 NAIEGMNGKELDGRNITVNEAQ 85
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G V
Sbjct: 147 MATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPV 206
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + +A+ + AL S++G L RA+R + A +
Sbjct: 207 SEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQK 259
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 99
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 85 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 144
Query: 100 TALESLNGVELEGRAMRVSLA 120
+ +LNG + +RV+ A
Sbjct: 145 RGMATLNGRRIHNNEIRVNWA 165
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ + L FQ +G V R D RG+ F+ T A+ LN
Sbjct: 309 YVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLN 362
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 363 GYNVNGRPLKCSWGKDR 379
>gi|255089439|ref|XP_002506641.1| predicted protein [Micromonas sp. RCC299]
gi|226521914|gb|ACO67899.1| predicted protein [Micromonas sp. RCC299]
Length = 285
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 13 NLDGREYLGRILRV---NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGN 69
+L GR + R+ R N S P P A + ++ V NL WS T+E L Q FQ+ G
Sbjct: 173 DLQGRSIIVRLERAGGANKSGGPNAGRP-EASSGLQIVVRNLPWSTTSEDLRQVFQQVGT 231
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 119
V+ A + ++GRS+G+G V + T+ + + A++ NGVELE R M++ L
Sbjct: 232 VIKAEAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKL 281
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 2 STVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP------------LYAETDFKLFVG 49
S V + I+ LDG R + V P P A + +VG
Sbjct: 55 SNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDTPAADGCRCYVG 114
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NL+W ESL + G VV A V GRS+G+G V + T +A+ +L+ +
Sbjct: 115 NLAWETNEESLIAHCSQVGTVVQAEVAKQ-PGGRSKGWGLVDFETPDAANSAINTLHNSD 173
Query: 110 LEGRAMRVSL 119
L+GR++ V L
Sbjct: 174 LQGRSIIVRL 183
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD---GESGRSRGYGFVCYSTKAEMETA 101
+L+VGN+ WS T + L F G + L D G GRSRGYG V YS E + A
Sbjct: 8 RLYVGNIPWSTTVDELRGIFSGCGTIT----LVDIPTGRQGRSRGYGIVEYSNVNEAQVA 63
Query: 102 LESLNGVELEGRAMRV 117
+++L+G L R + V
Sbjct: 64 IQTLDGHTLGDRNITV 79
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW SL AF +G+VV A+V+ D E+GRSRG+GFV ++ + A+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR +RV+ A R S
Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
>gi|255636284|gb|ACU18482.1| unknown [Glycine max]
Length = 280
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 12/115 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK---------LPLYAETDFKLFVGNL 51
MST+E+ +E G E GR+L VN K PK P + +++VGNL
Sbjct: 165 MSTLEELKKAVEMFSGYELNGRVLTVN---KAAPKGAQPERPPRPPRSFSSGLRVYVGNL 221
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
W V L Q F E+G V ARV+YD E+GRSRG+GFV S++ +M A+ +L+
Sbjct: 222 PWEVDDARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALD 276
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE D K+FVGNL + + +E+L F + G V A V+Y+ + RSRG+GFV ST E++
Sbjct: 114 AEED-KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELK 172
Query: 100 TALESLNGVELEGRAMRVSLAQGR 123
A+E +G EL GR + V+ A +
Sbjct: 173 KAVEMFSGYELNGRVLTVNKAAPK 196
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 1 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 59
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 60 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 106
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ F+G L+W+ + L AF++YG++V A+V+ D SGRSRG+GF+ + K M+
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+ ++NG++L+GR + V AQ
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L WS ++L AF +G V ARV+ D E+GRSRG+GFV Y + AL +
Sbjct: 37 KLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSA 96
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G L GR +RVS A+ RR
Sbjct: 97 MDGQNLGGRTVRVSFAEERR 116
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 64 SAIEGMNGKELDGRNITVNEAQ 85
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L WS ++L AF +G V ARV+ D E+GRSRG+GFV Y + AL +
Sbjct: 37 KLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSA 96
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G L GR +RVS A+ RR
Sbjct: 97 MDGQNLGGRTVRVSFAEERR 116
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W +L Q F+E+G V A V+ D ++GRSRG+GFV Y+ +A+ ETA+ S
Sbjct: 284 KLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIAS 343
Query: 105 LNGVELEGRAMRVSLA 120
+N +E +GR +RV A
Sbjct: 344 MNNIEFDGRTIRVDRA 359
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A ++ ++GR LG+ ++VN++ P + +FVG+LS V T L AF +G
Sbjct: 68 AALQTMNGRMILGKEVKVNWATTPS-SMKKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFG 126
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D ++ +S+GYGFV + K + E A++ +NG L GRA+R + A
Sbjct: 127 QISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWA 178
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 21/128 (16%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAE-------------TDFKLFVGN 50
D I+ ++G+ GR +R N++ + P P+ P + T+ +++G
Sbjct: 155 DAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVYIGG 214
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
++ +T + + F YG++ R+ D +GY F+ + T A+ S+NG ++
Sbjct: 215 VTTGLTEGKMRETFSHYGHIQEVRIFPD------KGYAFIRFMTHESAAHAIVSVNGSQI 268
Query: 111 EGRAMRVS 118
G ++ S
Sbjct: 269 NGHMVKCS 276
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL VT + Q F + G +++ E G + Y FV + + AL+++
Sbjct: 16 LYVGNLDRQVTEAFILQLFGQIGPCKSCKMI--AEHGGNDPYCFVEFVEHSHAAAALQTM 73
Query: 106 NGVELEGRAMRVSLA 120
NG + G+ ++V+ A
Sbjct: 74 NGRMILGKEVKVNWA 88
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW +SL AF +G VV A+V+ D E+GRSRG+GFV +S + A+
Sbjct: 37 KLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISE 96
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR +RV+ A R S
Sbjct: 97 MDGKDLNGRNIRVNQANDRPS 117
>gi|363814334|ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-------ETDFKLFVGNLSW 53
M++ E+ A ++ D E GRI+RV + + K ET ++ NL+W
Sbjct: 127 MASGEEAQAAVDKFDSYELSGRIIRVELAKRFKKPPSPPPPPGPRPGETRHVIYASNLAW 186
Query: 54 SVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+ L Q F E + ARV++D SGRS GYGFV + TK + E A+ +++G EL G
Sbjct: 187 KARSTHLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAISTVDGKELMG 246
Query: 113 RAMRVSLAQGR 123
R +R+ ++ +
Sbjct: 247 RPLRLKFSEKK 257
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
P+L + KL+V NLSWS+T + F + G V ++ + GRS+GY FV +
Sbjct: 70 PELTQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVEII-KSKDGRSKGYAFVTMA 128
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQ 121
+ E + A++ + EL GR +RV LA+
Sbjct: 129 SGEEAQAAVDKFDSYELSGRIIRVELAK 156
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+E
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W V +L AF YG V ARV+ D E+GRSRG+GFV + E + A++
Sbjct: 11 KLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQG 70
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G EL GR++RV A R S
Sbjct: 71 MDGHELGGRSIRVDYASDRPS 91
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 20 LGRILRVNFSDKPK-PKLPLYAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARV 75
LG +LR N S P + KLF+G LSW SL AF +G+VV A+V
Sbjct: 7 LGGLLRQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKV 66
Query: 76 LYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+ D E+GRSRG+GFV ++ + A+ ++G EL GR +RV+ A R S
Sbjct: 67 IVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPS 116
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSW+V + L Q FQ G VV ARV D SG+SRG+ +V +S+ AE + A+E +
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 106 NGVELEGRAMRVSLAQGRR 124
NG +++GR + V ++Q R+
Sbjct: 172 NGKQIDGREVNVDISQPRQ 190
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK----PKPKLPLYAETDFK----LFVGNLS 52
S+ + +E ++G++ GR + V+ S P+ + ++ +++ + LFVGNLS
Sbjct: 158 FSSPAEAQKAVEEMNGKQIDGREVNVDISQPRQPNPEKRAQVFGDSESQPSTTLFVGNLS 217
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
W+ T + L AF E+G+V R+ D ESG+ +G+G+V + + A E++ G +L+G
Sbjct: 218 WNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDLDG 277
Query: 113 RAMRVSLAQ 121
R +R+ +Q
Sbjct: 278 RTLRLDYSQ 286
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG LSW+ T + L + F+ +GNV+ A+V+ D E+G SRG+GFV + + M+ A+
Sbjct: 6 EFRCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E L+G EL+GR + V+ A+
Sbjct: 66 ERLHGKELDGRPITVNRAK 84
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E F +FVG+LS V E+LT+AF ++ + A V++D ++ RSRGYGFV + T+A+ E
Sbjct: 168 EPTFNIFVGDLSPEVDDETLTRAFSKFQTLKQAHVMWDMQTSRSRGYGFVTFGTQADAEL 227
Query: 101 ALESLNGVELEGRAMRVSLAQGRR 124
AL+++NG + GRA+R + A ++
Sbjct: 228 ALQTMNGEWINGRAIRCNWASHKQ 251
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L SVT + L F G + ++L D ++ Y F+ + T + AL +L
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILND-KNKPGFNYAFIEFDTNQAADMALHTL 139
Query: 106 NGVELEGRAMRVSLA 120
NG + ++++ A
Sbjct: 140 NGRIINNSEIKINWA 154
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M +A+
Sbjct: 1 EYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAI 60
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E +NG EL+GR + V+ AQ
Sbjct: 61 EGMNGKELDGRNITVNEAQ 79
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ L AF +G ++ ++++ D E+GRSRG+GFV ++++ M
Sbjct: 2 AEVEYRCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR + V+ AQ
Sbjct: 62 DAIEGMNGKDLDGRNITVNEAQ 83
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+E
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ +++L QAF ++G + ++V+ D E+GRSRG+GFV ++ + M
Sbjct: 4 SDVEYRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG +++GR + V+ AQ
Sbjct: 64 DAIEEMNGQDIDGRNITVNEAQ 85
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
LD G+ R + SDK LFVG+L+W+V SL +AFQE+ ++ GA
Sbjct: 208 LDDPVIPGKKARTDVSDKSS-----------TLFVGSLAWAVDDNSLYEAFQEFADLTGA 256
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +GRSRG+G+V ++T ALE G EL GRAM + +
Sbjct: 257 RVVTDKATGRSRGFGYVDFATPEAAAAALEGSQGRELAGRAMNIDFS 303
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-DKP---------------KPKLPLYAETDF 44
+T E A +E GRE GR + ++FS KP + + E+D
Sbjct: 275 FATPEAAAAALEGSQGRELAGRAMNIDFSGQKPAGDGNHQARASDRAQRHGDTVSPESD- 333
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
LFVGNL + V +++ F V R+ D E+G +G+G+V +++ + +TA
Sbjct: 334 TLFVGNLPFDVDQDTVNAFFSTAAEVTSVRLPTDPETGNLKGFGYVSFNSIDDAKTAFAQ 393
Query: 105 LNGVEL----EGRAMRVSLA 120
LNG + GRA+R+ A
Sbjct: 394 LNGQYVGEGRSGRAVRLDFA 413
>gi|356508060|ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 297
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD---FKLFVGNLSWSVTT 57
M + E+ + NL+ E+ GR+++VN++ K K P + F LFV NLS+ +
Sbjct: 118 MGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTPPPVKPKVVTFNLFVANLSYEASA 177
Query: 58 ESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
+ L + F G VV A V+Y R GYGFV Y +K E E AL G GR +R
Sbjct: 178 KDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQGKIFMGRPIR 237
Query: 117 VSLAQGRR 124
V +GRR
Sbjct: 238 VD--RGRR 243
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 37 PLYAETDF---KLFVGNLSWSVTTESLTQAFQEYGNVVGARV-LYDGESGRSRGYGFVCY 92
P+ AE +F +L N+ W+ T E + F+++G V+ + +Y + R+RG FV
Sbjct: 61 PVVAEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMY--KKNRNRGLAFVEM 118
Query: 93 STKAEMETALESLNGVELEGRAMRVSLAQGRR 124
+ E AL +L E EGR ++V+ A+ ++
Sbjct: 119 GSPEEALEALNNLESYEFEGRVIKVNYARPKK 150
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLS++V + L Q F E+G V V+ D E+GRS+G+ FV ST+ E A+E
Sbjct: 4 KIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAIEK 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG++L GRAM +S A+
Sbjct: 64 LNGMDLAGRAMNISEAK 80
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 59/82 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ ++L +AF +YG +V +++ D E+GRSRG+GFV ++++ M+
Sbjct: 40 SDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMK 99
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 100 DAIEGMNGQNLDGRNITVNEAQ 121
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+ SL F +YG V+ AR++ D ESGRSRG+GFV Y++ E A+ +
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 105 LNGVELEGRAMRVSLAQ 121
L+G L+GR++RV+ A
Sbjct: 91 LDGKTLDGRSIRVNHAN 107
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
+ + ++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G
Sbjct: 61 SALAAMNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKAAFAPFG 119
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 120 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +AL ++
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAM 66
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+S+S +++AF E+G+++G R+ D ESGR +G
Sbjct: 355 NFGDQASP------ESD-TLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKG 407
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ++LNG +L GR MR+ + R++
Sbjct: 408 FGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 446
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V + A+ A +
Sbjct: 263 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAK 322
Query: 106 NGVELEGRAMRVSLAQGR 123
VEL+GR + + A R
Sbjct: 323 KDVELDGRKLNIDFANAR 340
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG LSW++ E L + F+ G V GARV+Y+ SG+SRGYG+V + TK++ + AL+
Sbjct: 293 LFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKEY 352
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + + +++ +
Sbjct: 353 QGREIDGRPINLDMSESK 370
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLY----------AETDFKLFVGNL 51
T ++ GRE GR + ++ S+ KP+P P + + LF+GNL
Sbjct: 341 TKSQAQHALKEYQGREIDGRPINLDMSESKPRPSNPRFDRAKQFGDVPSAPSSTLFIGNL 400
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
S++ ++L F EYG VV R+ ++ + +G+G++ +ST E + ALE+LNG +E
Sbjct: 401 SFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAALEALNGEYVE 460
Query: 112 GRAMRVSLAQGR 123
GR R+ + R
Sbjct: 461 GRPCRLDFSTPR 472
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+S+S +++AF E+G+++G R+ D ESGR +G
Sbjct: 353 NFGDQASP------ESD-TLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKG 405
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 124
+G+V +S+ E +A ++LNG +L GR MR+ + R+
Sbjct: 406 FGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQ 443
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V + A+ A +
Sbjct: 261 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAK 320
Query: 106 NGVELEGRAMRVSLAQGR 123
VEL+GR + + A R
Sbjct: 321 KDVELDGRKLNIDFANAR 338
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG +S+ +SL AF YG V A+V+ D ESGRSRG+GFV +++ E A+
Sbjct: 32 KVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAITG 91
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L+GR +RVS A R S
Sbjct: 92 MDGKDLQGRIVRVSYAHDRGS 112
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+ SL F +YG V+ AR++ D ESGRSRG+GFV Y++ E A+ +
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 105 LNGVELEGRAMRVSLAQ 121
L+G L+GR++RV+ A
Sbjct: 91 LDGKTLDGRSIRVNHAN 107
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T E+L + F ++GN+ A V+ D ++ RSRG+GFV ++TKAE + A++
Sbjct: 3 KLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQR 62
Query: 105 LNGVELEGRAMRVSLAQ 121
+N + +GR +RV AQ
Sbjct: 63 MNNTQFDGRLIRVDHAQ 79
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+E +++ FVG L+W+ L + F ++G+V+ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 SEVEYRCFVGGLAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 62 DAIEEMNGKELDGRTITVNEAQ 83
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 62/100 (62%)
Query: 24 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 83
+RVN++ + + F +FVG+LS V E L QAF +G+V ARV++D ++GR
Sbjct: 161 IRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGR 220
Query: 84 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
SRGYGFV + +A+ E AL +++G L RA+R + A +
Sbjct: 221 SRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQK 260
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L F +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 310 YVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLN 363
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 364 GYNVNGRPLKCSWGKDR 380
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 49 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 107
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 108 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 154
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 131 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 190
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 191 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 244
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 245 TIEGHVVK 252
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF YG ++ ++++ D E+GRSRG+GFV +S++ M
Sbjct: 5 DVEYRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 65 AIEGMNGKELDGRNITVNEAQ 85
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 149 MSTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 208
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 209 SEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQK 261
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMSTL 152
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 311 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQTD------RGFAFVKMDTHENAAMAICQLS 364
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 365 GYNVNGRPLKCSWGRDR 381
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A +F+ FVG LSW+ T +L AF YG V+ A+V+ D ++ RSRG+GFV + + M+
Sbjct: 4 AVDEFRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQ 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A++ ++G +L+GR++ VS AQ
Sbjct: 64 DAIDGMHGKDLDGRSITVSKAQ 85
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 57/82 (69%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ T ++L AF ++G ++ ++++ D E+GRSRG+GFV + + M
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E + G +L+GR + V+ AQ
Sbjct: 62 DAIEGMKGQDLDGRNITVNEAQ 83
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL AF +G VV A+V+ D E+GRSRG+GFV +S + A+
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISE 96
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR +RV+ A R S
Sbjct: 97 MDGKDLNGRNIRVNPANDRPS 117
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ SL F +YG V+ AR++ D ESGRSRG+GFV Y++ E A+ +
Sbjct: 31 KLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G L+GR++RV+ A R
Sbjct: 91 MDGKTLDGRSIRVNHANER 109
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
L G L+W+ + ESL AF YG ++ ++V+ D E+GRSRG+GFV +S++ M A+E+
Sbjct: 84 PLPSGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 143
Query: 105 LNGVELEGRAMRVSLAQ 121
+NG EL+GR + V+ AQ
Sbjct: 144 MNGKELDGRNITVNQAQ 160
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS++V +SL AF YG+VV ARV+ D E+GRSRG+GFV ++++ +AL S
Sbjct: 37 KLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL-S 95
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR +RVS A R++
Sbjct: 96 MDGQDLNGRNIRVSYANDRQA 116
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 74 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 132
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 133 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 179
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT L Q F EYG V ++L D E+GR RG+GFV T+ E E+A+E+L
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E GRA+RV+ A+ R
Sbjct: 63 DGAEWMGRALRVNKARPR 80
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ +L AF +YG V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT E L AF +YGNV ++ D E+GR RG+GFV S +AE A+++L
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG E +GR ++V+ A+ R
Sbjct: 63 NGKEFKGRQLKVNKARPR 80
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 149 MQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGSV 208
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 209 SEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQK 261
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +++ D G S+G YGFV Y E A++
Sbjct: 91 LYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAERAMQ 150
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 151 TLNGRRVHQAEIRVNWA 167
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T L FQ +G VV R D RG+ FV T A+ L
Sbjct: 310 VYVGNLTPYTTQNDLVPLFQNFGYVVETRFQSD------RGFAFVKMDTHENAAMAICQL 363
Query: 106 NGVELEGRAMRVSLAQGR 123
+G + GR ++ S + +
Sbjct: 364 SGYNVNGRPLKCSWGKDK 381
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 46 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 104
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 105 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 151
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 128 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 187
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 188 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 241
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 242 TIEGHVVK 249
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V + L QAF +G+V
Sbjct: 132 MQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSAFGSV 191
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 192 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 244
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 77 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 135
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 136 NGRRVHQSEIRVNWA 150
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G V+ +R D RG+ F+ + A+ +N
Sbjct: 294 YVGNLTPYTTPNDVVPLFQNFGFVMESRFQAD------RGFAFIKMDSHENAAMAICQMN 347
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 348 GYNVNGRPLKCSWGKDK 364
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS++V +SL AF YG+VV ARV+ D E+GRSRG+GF+ ++++ +AL S
Sbjct: 12 KLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESATSAL-S 70
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR +RVS A R++
Sbjct: 71 MDGQDLNGRNIRVSYANDRQA 91
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+ SL F +YG V+ AR++ D ESGRSRG+GFV Y++ E A+ +
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 105 LNGVELEGRAMRVSLAQ 121
L+G L+GR++RV+ A
Sbjct: 91 LDGKTLDGRSIRVNHAN 107
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY F+ +S+ A+ S+NG
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGHVVK 269
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 57/77 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV L QAF E+G++V A+V+ + ++GRS+G+GFV T AE A+E+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAVEA 63
Query: 105 LNGVELEGRAMRVSLAQ 121
+NG L+GRA+ V+ A+
Sbjct: 64 MNGHSLQGRALTVNEAR 80
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 29 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 87
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 88 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 134
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 111 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 170
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 171 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 225 TIEGHVVK 232
>gi|356531425|ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-------ETDFKLFVGNLSW 53
M++ E+ A ++ D E GRI+RV + + K L ET ++ NL+W
Sbjct: 120 MASGEEAQAAVDKFDSYELSGRIIRVELAKRLKKPPSLPPPPGPRPGETRHVIYASNLAW 179
Query: 54 SVTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+ L Q F E + ARV++D SGRS GYGFV + T+ + E A+ +++G EL G
Sbjct: 180 KARSTHLRQVFTENFKTPSSARVVFDSPSGRSAGYGFVSFLTREDAEAAISTVDGKELMG 239
Query: 113 RAMRVSLAQGRR 124
R +R+ ++ +
Sbjct: 240 RPLRLKFSEKNK 251
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V NLSWS+T +T F + G V ++ + GRS+GY FV ++ E + A++
Sbjct: 74 KLYVVNLSWSLTAADITDLFAQCGTVTDVEII-KSKDGRSKGYAFVTMASGEEAQAAVDK 132
Query: 105 LNGVELEGRAMRVSLAQ 121
+ EL GR +RV LA+
Sbjct: 133 FDSYELSGRIIRVELAK 149
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 46 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 104
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 105 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 151
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P ET+ K ++
Sbjct: 128 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYC 187
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 188 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 241
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 242 TIEGHVVK 249
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+++S +++AF E+G+++G R+ D ESGR +G
Sbjct: 325 NFGDQTSP------ESD-TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKG 377
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ++LNG +L GR+MR+ + R++
Sbjct: 378 FGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 416
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V ++ A+ A +
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 292
Query: 106 NGVELEGRAMRVSLAQGR 123
EL+GR + V A GR
Sbjct: 293 KDAELDGRKLNVDFANGR 310
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+ +SL AF +G+VV ARV+ D ++GRSRG+GFV +S+ +AL +
Sbjct: 37 KLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSA 96
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL GR +RVS A R
Sbjct: 97 MDGQELHGRNIRVSYATER 115
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 24 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 82
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 83 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 129
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 106 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 165
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 166 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 219
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 220 TIEGHVVK 227
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 57 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 115
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 116 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 162
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK A T + ++
Sbjct: 139 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSSPSNCTVYC 198
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 199 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 252
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 253 TIEGHIVK 260
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQK-KDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 24 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 83
+RVN++ + F +FVG+LS V E L QAF +G+V ARV++D ++GR
Sbjct: 168 IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGR 227
Query: 84 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
SRGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 228 SRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQK 267
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 317 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLS 370
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 371 GYNVNGRPLKCSWGKDR 387
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 149 MATLNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 208
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 209 SEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQK 261
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT + L Q F+ G+V +++ D S + YGFV Y E A+ +L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAMATL 152
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 153 NGRRVHQSEIRVNWA 167
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 311 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLS 364
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 365 GYNVNGRPLKCSWGKDR 381
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ++L +AF YG V+ ++++ D E+GRSRG+GFV ++ + M
Sbjct: 4 ADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 46 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 104
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 105 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 151
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 128 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 187
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 188 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 241
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 242 TIEGHVVK 249
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ + ++L +AF YG V+ ++++ D E+GRSRG+GFV ++ + M
Sbjct: 4 ADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+E +NG L+GR + V+ AQ
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|303286031|ref|XP_003062305.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455822|gb|EEH53124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 227
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPK----------LPLYAETDF---KLFVGNL 51
E I LDG + GR +RVN S+ + P DF K++ GNL
Sbjct: 94 EIAEKAIAELDGADVDGRPIRVNISEARSSRREYDGERGERAPRERNYDFDARKVYFGNL 153
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
SW + L EYG V +R++ D E+GRSRG+GFV S+ + E + LNG +++
Sbjct: 154 SWGMDHLDLQDLCGEYGEVADSRLITDRETGRSRGFGFVTMSSAEQAEKVVNGLNGQDVD 213
Query: 112 GRAMRVSLAQ 121
GR +RV++A
Sbjct: 214 GRVLRVNIAN 223
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLSW V LT F EY + G V+ D +GRSRG+GFV ++ E A+
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEY-DASGIAVISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
L+G +++GR +RV++++ R S
Sbjct: 103 LDGADVDGRPIRVNISEARSS 123
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ + +++VGNLSW VT ESL + F E+ +V A V+ D E+GRSRG+ FV + + ++E
Sbjct: 911 QDEHRVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVER 969
Query: 101 ALESLNGVELEGRAMRVSLAQGR 123
A +LNG E++GR +RVS AQ +
Sbjct: 970 ASAALNGREVDGRELRVSKAQAQ 992
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK-----LPLYAETDF------KLFVG 49
M+ ED L+GRE GR LRV+ + + DF +++ G
Sbjct: 961 MNNEEDVERASAALNGREVDGRELRVSKAQAQAERGERPMRMPRQRRDFDQAEGRRVYFG 1020
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NLSW + L E+G+V +R++ D ++GRSRG+GFV S E + + LNG +
Sbjct: 1021 NLSWGMDQYDLQDLCSEFGSVEDSRLITDRDTGRSRGFGFVTMSNTTEADEVVAQLNGQD 1080
Query: 110 LEGRAMRVSLA 120
++GR +RV++A
Sbjct: 1081 VDGRVLRVNIA 1091
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 15 DGREYLGRILRVNFSDKPKP-------------KLPLYAETDFKLFVGNLSWSVTTESLT 61
DG E GR +RVN++ + KP K AET L++G+LS+SVT + +
Sbjct: 257 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAET---LWIGSLSFSVTEDQVY 313
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+AF ++G+V R+ D ++G +G+G+V +S+ + AL+++NG E+ GRA+RV A
Sbjct: 314 EAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAP 373
Query: 122 GRR 124
++
Sbjct: 374 PKQ 376
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V + A++E++ +++
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEF---ADLESSAKAI 254
Query: 106 --NGVELEGRAMRVSLAQGRR 124
+G E++GRA+RV+ A R+
Sbjct: 255 EKDGSEIDGRAIRVNYATQRK 275
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum CS3096]
Length = 112
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++GNLSW+ T ++L A QE+G ++ + V+ D ++GRSRG+GFV + + E E A+
Sbjct: 4 KLYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVNG 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LN EL+GR ++V++A
Sbjct: 64 LNEQELDGRRIKVNMAN 80
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL +SV +SL F E+GNV A+V+ D +SGRS+G+GFV +++AE + A+
Sbjct: 4 KLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAING 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG ++GR + V++++
Sbjct: 64 LNGQSVDGRQIVVNVSR 80
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 29 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 87
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 88 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 134
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E+ K ++
Sbjct: 111 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYC 170
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ R +GY FV +ST A+ S+NG
Sbjct: 171 GGIASGLTDQLMRQTFSPFGQILETRAF------PGKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 225 TIEGHVVK 232
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+++S +++AF E+G+++G R+ D ESGR +G
Sbjct: 353 NFGDQTSP------ESD-TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKG 405
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ++LNG +L GR+MR+ + R++
Sbjct: 406 FGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 444
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V ++ A+ A +
Sbjct: 261 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 320
Query: 106 NGVELEGRAMRVSLAQGR 123
EL+GR + V A GR
Sbjct: 321 KDAELDGRKLNVDFANGR 338
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 67 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 125
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 126 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 172
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E K ++
Sbjct: 149 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYC 208
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 209 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 262
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 263 TIEGHVVK 270
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 15 DGREYLGRILRVNFSDKPKP-------------KLPLYAETDFKLFVGNLSWSVTTESLT 61
DG E GR +RVN++ + KP K AET L++G+LS+SVT + +
Sbjct: 254 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAET---LWIGSLSFSVTEDQVY 310
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+AF ++G+V R+ D ++G +G+G+V +S+ + AL+++NG E+ GRA+RV A
Sbjct: 311 EAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAP 370
Query: 122 GRR 124
++
Sbjct: 371 PKQ 373
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V + A++E++ +++
Sbjct: 195 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEF---ADLESSAKAI 251
Query: 106 --NGVELEGRAMRVSLAQGRR 124
+G E++GRA+RV+ A R+
Sbjct: 252 EKDGSEIDGRAIRVNYATQRK 272
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 29 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 87
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 88 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 134
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 111 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 170
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 171 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 225 TIEGHVVK 232
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 152 MQTLNGRRIHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSV 211
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + + AL S++G L RA+R + A +
Sbjct: 212 SEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQK 264
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L+VG L VT + L Q F+ G+V +V+ D S+G YGFV + E A++
Sbjct: 94 LYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERAMQ 153
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 154 TLNGRRIHQSEIRVNWA 170
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ L FQ +G V+ R+ D RG+ F+ T A+ LN
Sbjct: 314 YVGNLTPYTAQNDLVPLFQNFGYVLETRLQAD------RGFAFIKMDTHENAAMAICQLN 367
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 368 GYNVNGRPLKCSWGKDR 384
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 74 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 132
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 133 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 156 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 215
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 216 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 269
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 270 TIEGHVVK 277
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL +SVT +SL F E+G V A+V+ D ++GRS+G+ FV ST A + A++
Sbjct: 30 KIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAIDG 89
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG ++GR++ V+LA+ R
Sbjct: 90 LNGQSVDGRSIVVNLARPR 108
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 57 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 115
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 116 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 162
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 66/113 (58%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V + L QAF +G+V
Sbjct: 134 MQTLNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGSV 193
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 194 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 246
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+++L
Sbjct: 79 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAAERAMQTL 137
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 138 NGRRVHQSEIRVNWA 152
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +N
Sbjct: 296 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMN 349
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 350 GYNVNGRPLKCSWGKDK 366
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 29 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 87
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 88 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 134
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P ET+ K ++
Sbjct: 111 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYC 170
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 171 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 225 TIEGHVVK 232
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 16/123 (13%)
Query: 15 DGREYLGRILRVNFSDKPKP-------------KLPLYAETDFKLFVGNLSWSVTTESLT 61
DG E GR +RVN++ + KP K AET L++G+LS+SVT + +
Sbjct: 257 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAET---LWIGSLSFSVTEDQVY 313
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+AF ++G+V R+ D ++G +G+G+V +S+ + AL+++NG E+ GRA+RV A
Sbjct: 314 EAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRVDFAP 373
Query: 122 GRR 124
++
Sbjct: 374 PKQ 376
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V ++ A+E
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEK- 256
Query: 106 NGVELEGRAMRVSLAQGRR 124
+G E++GRA+RV+ A R+
Sbjct: 257 DGSEIDGRAIRVNYATQRK 275
>gi|384498314|gb|EIE88805.1| hypothetical protein RO3G_13516 [Rhizopus delemar RA 99-880]
Length = 199
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 5/114 (4%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETD----FKLFVGNLSWSVTTESLTQAFQE 66
I++++GR+ +R N++ +P + + D F +FVG+L+ +T E+L QAF
Sbjct: 39 IQDMNGRKIFNYEIRANWA-QPSSSVQQTIKEDTTHHFHIFVGDLAPEITNETLAQAFSV 97
Query: 67 YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+G + A V++D SG+SRG+GFV + KA+ E A+ ++NG L R +R + A
Sbjct: 98 FGTMSEAHVMWDPMSGKSRGFGFVAFRDKADAEKAIATMNGEWLGSRPVRCNWA 151
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
AE +++ FVG L+W+ SL AF +G ++ ++++ D E+GRSRG+GFV +S + M
Sbjct: 5 AEVEYRCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMR 64
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A++++NG L+GR + V+ AQ
Sbjct: 65 DAIDAMNGKVLDGRNITVNPAQ 86
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 36 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 94
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 95 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 141
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 118 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 177
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 178 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 231
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 232 TIEGHVVK 239
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVG +S+ SL +AF +YG V+ ARV+ D E+GRSRG+ FV Y++ E +A+++
Sbjct: 41 KVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR +RV+ A R
Sbjct: 101 LDGQDLHGRRVRVNYANDR 119
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 9/115 (7%)
Query: 20 LGRILRVNFSDKPKPKLPLYAETDF---------KLFVGNLSWSVTTESLTQAFQEYGNV 70
G IL+ S + ++ L + + F KLF+G +++S+ +SL +AF +YG V
Sbjct: 7 FGNILKQTTSKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEV 66
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
V RV+ D E+GRSRG+GFV +++ +A+++L+G +L GR ++V+ A R S
Sbjct: 67 VETRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRTS 121
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 173
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 150 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 210 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 263
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 264 TIEGHVVK 271
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ T SL +AF+ +G VV +V+ D E+GRSRG+GFV ++ + M A+
Sbjct: 1 EFRCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAI 60
Query: 103 ESLNGVELEGRAMRVSLA 120
+ +NG EL+GR + V+ A
Sbjct: 61 KDMNGKELDGRNITVNQA 78
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LF+GN+++S +++AF E+G+++G R+ D ESGR +G
Sbjct: 323 NFGDQTSP------ESD-TLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKG 375
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E +A ++LNG +L GR+MR+ + R++
Sbjct: 376 FGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQN 414
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLSW+V E L F+E+G + G R++ D +SGRSRG+G+V ++ A+ A +
Sbjct: 231 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAK 290
Query: 106 NGVELEGRAMRVSLAQGR 123
EL+GR + V A GR
Sbjct: 291 KDAELDGRKLNVDFANGR 308
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 173
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 150 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 210 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 263
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 264 TIEGHVVK 271
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 59 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 117
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 118 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 164
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 141 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 200
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 201 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 254
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 255 TIEGHVVK 262
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAF 64
+D + ++ R+ LG+ ++VN++ P + F +FVG+LS +TTE + AF
Sbjct: 82 KDAASARATMNKRKILGKEVKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF 140
Query: 65 QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+G++ ARVL D +G+S+GYGFV + K + E A+ + G L+GR +R + A
Sbjct: 141 APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWA 196
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I + G+ GR +R N++ + P + + K ++
Sbjct: 173 DAENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYC 232
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G + +T + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 233 GGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVSVNGT 286
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 287 VIEGNLVK 294
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETD-FKLFVGNLSWSVTTESLTQAFQEYGN 69
++ L+GR +RVN++ + ++ F +FVG+LS V E LTQAF +G+
Sbjct: 144 MQTLNGRRVHQSEIRVNWAYQSANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGS 203
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
V ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 204 VSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 257
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 35 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
+ P Y T +VGNL+ T L FQ +G VV +R D RG+ F+ T
Sbjct: 298 QTPAYQTT---CYVGNLTPYTTANDLVPLFQNFGYVVESRFQSD------RGFAFIKMDT 348
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+A+ +LNG + GR ++ S + + +
Sbjct: 349 HENATSAICNLNGYNVNGRPLKCSWGKDKNT 379
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+++L
Sbjct: 89 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAADRAMQTL 147
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 148 NGRRVHQSEIRVNWA 162
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 173
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P ET+ K ++
Sbjct: 150 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYC 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 210 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 263
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 264 TIEGHVVK 271
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 124
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTES------ 59
D I+ + G+ GR +R N++ + KP P ++ F+ G LS V E+
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATR-KPPAP---KSTFESRSGPLSPRVPDEAVQSVLP 203
Query: 60 -----LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
+ Q F +G ++ RV D +GY FV +S+ A+ S+NG +EG
Sbjct: 204 APEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHV 257
Query: 115 MR 116
++
Sbjct: 258 VK 259
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W T +++ +AF +G V +++ D ++GRSRG+GFV ++T + E AL++
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 105 LNGVELEGRAMRVSLA 120
L+G +L GR +RV+ A
Sbjct: 103 LDGRDLAGRTIRVNYA 118
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 35
+T +D A ++ LDGR+ GR +RVN++ K P+
Sbjct: 90 FATDQDAEAALQALDGRDLAGRTIRVNYATKQSPQ 124
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-ETDFKLFVGNLSWSVTTESLTQA 63
ED IE ++G E+ GR L VN S PK + P A + KL+VGNLSW +L +
Sbjct: 246 EDSLKAIEGMNGVEFDGRTLNVNKS-LPKGQRPAAAAPKETKLYVGNLSWGTEEGALREL 304
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
F EYG+V+ + D E+G+ RG+ FV + A E+ +G EL+GR +RV+ AQ
Sbjct: 305 FGEYGSVIDCYIPTDRETGQHRGFAFVTMGPDDALRAADET-DGYELDGRILRVNEAQ 361
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 18/137 (13%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLP---------LYAETDFKLFVGNL 51
M+ +D A IE L+ E GR + V+ S PK ++ + K++VGNL
Sbjct: 145 MTNSDDHEAAIEQLNMSEIAGRTIYVSES-LPKDQVAEKKKKFQGRKKRDEGAKIYVGNL 203
Query: 52 SWSVTTESLTQAFQEYGNVVGA--RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
++ T E L AF+E+G+V+ V YD G +RG+GF+ S + ++ A+E +NGVE
Sbjct: 204 NFDTTAEDLKAAFEEFGDVMDCFLPVDYD---GNARGFGFIQMSDEDSLK-AIEGMNGVE 259
Query: 110 LEGRAMRV--SLAQGRR 124
+GR + V SL +G+R
Sbjct: 260 FDGRTLNVNKSLPKGQR 276
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 80 ESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
E+G+ RG+ FV + + E A+E LN E+ GR + VS
Sbjct: 133 ETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTIYVS 171
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 24 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 83
+RVN++ + F +FVG+LS V E L QAF +G+V ARV++D ++GR
Sbjct: 138 IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGR 197
Query: 84 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
SRGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 198 SRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQK 237
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ L+
Sbjct: 287 YVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLS 340
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 341 GYNVNGRPLKCSWGKDR 357
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
T+ KLFV LSWSV +SL AF +G+V +LYD SGRSRG+GFV + + E +A
Sbjct: 16 TNNKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSA 75
Query: 102 LESLNGVELEGRAMRVSLAQGR 123
++++G L GR +R+S A R
Sbjct: 76 KDAMDGKALLGRPLRISYALER 97
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W T +++ +AF +G V +++ D ++GRSRG+GFV ++T + E AL++
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 105 LNGVELEGRAMRVSLA 120
L+G +L GR +RV+ A
Sbjct: 103 LDGRDLAGRTIRVNYA 118
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPK 35
+T +D A ++ LDGR+ GR +RVN++ K P+
Sbjct: 90 FATDQDAEAALQALDGRDLAGRTIRVNYATKQSPQ 124
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW V L +AF +G+V ARV+ D ++G+SRG+GFV Y++ A+
Sbjct: 38 KLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAISG 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G E++GR +RV++A R
Sbjct: 98 MDGKEIDGRPVRVNIANDR 116
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGF + + + E AL S++G L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQK 263
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG--RSRG--YGFVCYSTKAEMETA 101
L+VG L VT E L Q F+ G+V +++ D G +S+G YGFV Y E A
Sbjct: 91 LYVGGLDPRVTEEILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERA 150
Query: 102 LESLNGVELEGRAMRVSLA 120
+++LNG + +RV+ A
Sbjct: 151 MQTLNGRRVHQAEIRVNWA 169
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + L FQ +G VV R D RG+ FV + A+ L+
Sbjct: 313 YVGNLTPYTTQQDLVPLFQNFGYVVETRFQSD------RGFAFVKMDSHENAALAICQLS 366
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 367 GYNVNGRPLKCSWGKDK 383
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++VGNLS+++T L F EYG V A ++ D SG+SRG+GFV +A+ E A+E
Sbjct: 1 MNIYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIE 60
Query: 104 SLNGVELEGRAMRVSLAQGR 123
+LNG +L+GR+++V+ A+ R
Sbjct: 61 ALNGSQLDGRSLKVNEARPR 80
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 146 MQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 205
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGF + + + E AL S++G L RA+R + A +
Sbjct: 206 SEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQK 258
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT E L Q F+ G+V +++ D S + YGFV Y E A+++L
Sbjct: 91 LYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNS-KGFNYGFVEYDDPGAAERAMQTL 149
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 150 NGRRVHQAEIRVNWA 164
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + L FQ +G VV R D RG+ FV + A+ L+
Sbjct: 308 YVGNLTPYTTQQDLVPLFQNFGYVVETRFQAD------RGFAFVKMDSHENAALAICQLS 361
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 362 GYNVNGRPLKCSWGKDK 378
>gi|406993247|gb|EKE12437.1| Glycine-rich RNA-binding protein GRP1A [uncultured bacterium]
Length = 86
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL+W VT E L F G+VV A V+ D +GRSRG+GFV + AE +TA+E
Sbjct: 4 KLFVGNLAWEVTVEDLKALFAGAGSVVDAAVITDRMTGRSRGFGFVTMGSDAEAQTAVEK 63
Query: 105 LNGVELEGRAMRVSLAQ 121
N +L+GR + V++A+
Sbjct: 64 FNQYDLKGRKLNVNVAR 80
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ +++ FVG L+W+ SL AF ++G +V ++++ D E+GRSRG+GFV + + M+
Sbjct: 5 DVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG +L+GR++ V+ AQ
Sbjct: 65 AIEGMNGQDLDGRSITVNEAQ 85
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A+ +++ FVG L+W+ +L +AF +YG +V +++ D E+GRSRG+GFV ++++ M+
Sbjct: 4 ADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMK 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A+ ++NG L+GR + V+ AQ
Sbjct: 64 DAIGAMNGQNLDGRNITVNEAQ 85
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAF 64
+D + ++ R+ LG+ ++VN++ P + F +FVG+LS +TTE + AF
Sbjct: 60 KDAASARATMNKRKILGKEVKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF 118
Query: 65 QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+G++ ARVL D +G+S+GYGFV + K + E A+ + G L+GR +R + A
Sbjct: 119 APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWA 174
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I + G+ GR +R N++ + P + + K ++
Sbjct: 151 DAENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYC 210
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G + +T + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 211 GGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVSVNGT 264
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 265 VIEGNLVK 272
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G +S+S L +AF YG+V+ A+++ D ++GRSRG+GF+ ++T E +AL++
Sbjct: 41 KLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQA 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
++ EL+GR +RV+ A R
Sbjct: 101 MDNKELDGRTVRVNYATER 119
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG LSW+ T +L AF YG V+ A+V+ D ++ RSRG+GFV + + M+ A+
Sbjct: 1 EFRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAI 60
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+ ++G +L+GR++ VS AQ
Sbjct: 61 DGMHGKDLDGRSITVSKAQ 79
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%)
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NLSW+ T E+L QAF ++G V+ + V+ D ++GRSRG+GFV +S E + A+ LN E
Sbjct: 33 NLSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTFSNSGEADAAINGLNEQE 92
Query: 110 LEGRAMRVSLAQGR 123
L+GR ++V++A R
Sbjct: 93 LDGRRIKVNMANAR 106
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A I ++GR+ LG+ ++VN++ P + + F +FVG+LS +TT+ + AF +G
Sbjct: 52 ATIAAMNGRKILGKEVKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAFGPFG 110
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 111 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 162
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSD-KPKPK----------------LPLYAETDFKLFV 48
D I+ + G+ GR +R N++ KP PK + + ++ ++
Sbjct: 139 DAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYC 198
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G+++ RV D +GY FV +++ A+ S+NG
Sbjct: 199 GGVTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNGT 252
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 253 TIEGYVVK 260
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S M
Sbjct: 7 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMR 66
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 67 SAIEGMNGKELDGRNITVNEAQ 88
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +ST+ M
Sbjct: 4 SDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMR 63
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+E +NG EL+GR + V+ AQ
Sbjct: 64 NRIEGMNGKELDGRNITVNEAQ 85
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W +L Q F+E+G V A V+ D ++GRSRG+GFV ++ +++ E A+++
Sbjct: 3 KLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N VE +GR +RV A R
Sbjct: 63 MNNVEFDGRTIRVDKASDR 81
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E LT+ F+E+G + RV+ D +SGRS+GYG+V + + + ALE+
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 106 NGVELEGRAMRVSLAQGR 123
+G L+ R +RV L R
Sbjct: 315 HGYTLDNRELRVDLGTPR 332
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 52/72 (72%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGN+S+ T + +T+ FQEYG++ R+ D E+G +G+G+V +S+ E ++A+E+L
Sbjct: 363 LFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENL 422
Query: 106 NGVELEGRAMRV 117
GV++ GR +R+
Sbjct: 423 TGVDIAGRPIRL 434
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ T SL +AF+ +G VV +V+ D E+GRSRG+GFV ++ + M A+
Sbjct: 4 EFRCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAI 63
Query: 103 ESLNGVELEGRAMRVSLA 120
+ +NG EL+GR + V+ A
Sbjct: 64 KDMNGKELDGRNITVNQA 81
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 61/100 (61%)
Query: 24 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 83
+RVN++ + + F +FVG+LS V E L QAF G+V ARV++D ++GR
Sbjct: 140 IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGR 199
Query: 84 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
SRGYGFV + +A+ E AL S++G L RA+R + A +
Sbjct: 200 SRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQK 239
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R D RG+ FV T A+ LN
Sbjct: 289 YVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKMDTHENAAMAICQLN 342
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 343 GYNVNGRPLKCSWGKDR 359
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 77 MNGRKIMGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 135
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 136 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAF 64
+D + ++ R+ LG+ ++VN++ P + F +FVG+LS +TTE + AF
Sbjct: 58 KDAASARATMNKRKILGKEVKVNWATSPSCQKK-DTSNHFHVFVGDLSPDITTEDIRAAF 116
Query: 65 QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+G++ ARVL D +G+S+GYGFV + K + E A+ + G L+GR +R + A
Sbjct: 117 APFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWA 172
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I + G+ GR +R N++ + P + + K ++
Sbjct: 149 DAENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQDNGSKHLKFDDIVTQSSPHNCTVYC 208
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G + +T + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 209 GGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVSVNGT 262
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 263 VIEGNLVK 270
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ + SL +AF YG +V A+++ D E+GRSRG+GFV + + M +A+
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E++NG L+GR + V+ AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQ 85
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ + SL +AF YG +V A+++ D E+GRSRG+GFV + + M +A+
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E++NG L+GR + V+ AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQ 85
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ + SL +AF YG +V A+++ D E+GRSRG+GFV + + M +A+
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E++NG L+GR + V+ AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQ 85
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ + SL +AF YG +V A+++ D E+GRSRG+GFV + + M +A+
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E++NG L+GR + V+ AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQ 85
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ + SL +AF YG +V A+++ D E+GRSRG+GFV + + M +A+
Sbjct: 7 EFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAI 66
Query: 103 ESLNGVELEGRAMRVSLAQ 121
E++NG L+GR + V+ AQ
Sbjct: 67 EAMNGHILDGRNITVNEAQ 85
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 10 VIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGN 69
++ ++G + R ++VN++ + + +FVG+LS + T L AF ++G+
Sbjct: 60 ALDAMNGYSFGSRAIKVNWATNSSMRKD---TNHYHIFVGDLSPDIDTTLLRSAFNQFGH 116
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
V ARV+ D +G+ RGYGFV Y K E E A++S+NG L GR +R + A
Sbjct: 117 VSDARVVKDSATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWA 167
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
++GNL T +S+ + F ++G + +++ E G + YGFV Y+ K AL+++N
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLI--TEHGGNDPYGFVEYAEKNSAARALDAMN 65
Query: 107 GVELEGRAMRVSLA 120
G RA++V+ A
Sbjct: 66 GYSFGSRAIKVNWA 79
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS T E+L + F +G + RV D + Y F+ Y + A+ +
Sbjct: 204 VYVGNLSAGTTEETLRRIFIPFGPIADIRVFPD------KNYAFIRYMSHDHATNAIVVI 257
Query: 106 NGVELEGRAMRVSLAQ 121
+G +EG ++ S +
Sbjct: 258 HGTAVEGSQVKCSWGK 273
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ F+G L+WS + L AF+++G + A+V+ D SGRSRG+GFV + K M+ A+
Sbjct: 6 EYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+++NG++L+GR + V AQ
Sbjct: 66 DAMNGMDLDGRTITVDKAQ 84
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L+QAF +G+V
Sbjct: 109 MQTLNGRRV--HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSV 166
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 167 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 219
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++G L VT + L Q F+ G+V +++ D ++ + YGFV Y A+++L
Sbjct: 54 LYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNQKGYNYGFVEYDDPGAAARAMQTL 112
Query: 106 NG 107
NG
Sbjct: 113 NG 114
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +
Sbjct: 268 VYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMESHEAAAMAICQM 321
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + GR ++ S + +
Sbjct: 322 NGYNVNGRPLKCSWGKDK 339
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+WS +SL AF +G V ARV+ D ++GRSRG+GFV Y + AL +
Sbjct: 37 KLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSA 96
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G EL GR +RV A +R
Sbjct: 97 MDGQELGGRNIRVGYATDKR 116
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 59/81 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL +SVT ESL F E+G V ++++ D E+GRS+G+GFV S+ + ++A+
Sbjct: 4 KIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAITG 63
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
LNG+ ++GR++ V+LA+ R +
Sbjct: 64 LNGLSVDGRSIVVNLARPREA 84
>gi|412986787|emb|CCO15213.1| predicted protein [Bathycoccus prasinos]
Length = 260
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 9/124 (7%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKP--------KPKLPLYAETDFKLFVGNLSWSVT 56
E ++ I L+ + GR +RV S P +PK A+ K++ GNLSW +
Sbjct: 125 EMADSAIAALNDSDQFGRQMRVVISLPPEERPAREQRPKRNWDADGR-KVYFGNLSWGMD 183
Query: 57 TESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
L E+GNV +R++ D E+GRSRG+GFV S++ E E + LNG +++GR +R
Sbjct: 184 HLDLQDLCAEFGNVDESRLITDRETGRSRGFGFVTMSSEKEAEDVVAQLNGQDVDGRVLR 243
Query: 117 VSLA 120
V++A
Sbjct: 244 VNIA 247
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL++GNLSW + ++L F +Y ++ D +GRSRG+GF ++ ++A+ +
Sbjct: 75 KLYIGNLSWDMDDQALNDLFSQY-QASDCVIVTDRNTGRSRGFGFATVPSQEMADSAIAA 133
Query: 105 LNGVELEGRAMRVSLA 120
LN + GR MRV ++
Sbjct: 134 LNDSDQFGRQMRVVIS 149
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW+ SL Q F+E+G V A V+ D ++GRSRG+GFV +ST E A+ +
Sbjct: 3 KLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMNA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRQIRVDKATER 81
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR +RVN++ + F +FVG+LS V + L QAF +G+V
Sbjct: 133 MATLNGRRVHQSEIRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSV 192
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + + E AL S++G L RA+R + A +
Sbjct: 193 SEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQK 245
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y + A+ +L
Sbjct: 78 LYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGYNYGFVEYDDPGAADRAMATL 136
Query: 106 NGVELEGRAMRVSLA 120
NG + +RV+ A
Sbjct: 137 NGRRVHQSEIRVNWA 151
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +N
Sbjct: 295 YVGNLTPYTTHTDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMN 348
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 349 GYNVNGRPLKCSWGKDK 365
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%)
Query: 38 LYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAE 97
+ + +++ FVG L+W+ L + F ++G V+ ++++ D E+GRSRG+GFV + +
Sbjct: 1 MSTDVEYRCFVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKS 60
Query: 98 METALESLNGVELEGRAMRVSLAQ 121
M A+E +NG EL+GR++ V+ AQ
Sbjct: 61 MRDAIEEMNGKELDGRSITVNEAQ 84
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F+ FVG L+W+ T L AF+ +G VV ++V+ D E+GRSRG+GFV ++ + M A+
Sbjct: 6 EFRCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+ +NG EL+GR + V+ AQ
Sbjct: 66 KEMNGQELDGRNITVNQAQ 84
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF GNLSW++ +L +AF+E+ +VGARV+ D + GRSRG+G+V + T A E++
Sbjct: 262 LFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFETPEAATKAYEAM 321
Query: 106 NGVELEGRAMRVSLAQGR 123
G EL+GR + + A R
Sbjct: 322 QGFELDGRPLNLDYANTR 339
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLYAETDFK-------------LFV 48
T E E + G E GR L +++++ +P P TD LF+
Sbjct: 310 TPEAATKAYEAMQGFELDGRPLNLDYANTRPAESNPRDRATDRAKKHGDSVSPESETLFI 369
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL + E++ Q F E V R+ D +SG +G+G+V +++ + +T + LNG
Sbjct: 370 GNLPFDTDQETVRQFFAEVAEVTSVRLPTDPDSGNLKGFGYVSFNSVEDAKTVFQQLNGA 429
Query: 109 EL----EGRAMRVSLAQGR 123
L R++R+ A R
Sbjct: 430 SLGNGRMSRSVRLDFASSR 448
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW T+E L F EYG + +V+ D E+GRSRG+GFV ++ ++ A +
Sbjct: 9 KLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKC 68
Query: 105 LNGVELEGRAMRVSLA 120
++G EL+ R +RV A
Sbjct: 69 MDGTELDSRQIRVDYA 84
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD--KPKPKLPLYAE--TDFKLFVGNLSWSVT 56
M + E+ A + NL+ E GR ++VN+++ K KP P+ + T + LF+ NL +
Sbjct: 136 MGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQAR 195
Query: 57 TESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
+ L + F NVV A V++ RS GYGFV + +K E +TAL S G GR +
Sbjct: 196 AKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPL 255
Query: 116 RVSLAQGRR 124
RV A+ RR
Sbjct: 256 RV--ARSRR 262
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L N+ W+ T + + F++YG V+ + ++ R+RG F+ + E AL +
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 105 LNGVELEGRAMRVSLAQGRR 124
L ELEGRA++V+ A ++
Sbjct: 149 LESYELEGRAIKVNYANPQK 168
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A I ++GR+ LG+ ++VN++ P + + F +FVG+LS +TT+ + AF +G
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAFAPFG 119
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 120 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSD-KPKPK----------------LPLYAETDFKLFV 48
D I+ + G+ GR +R N++ KP PK + + ++ ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +++ A+ S+NG
Sbjct: 208 GGVTTGLTEQIMRQTFSPFGQIMEIRVFPE------KGYSFVRFNSHEAAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 SIEGYVVK 269
>gi|225459201|ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD--KPKPKLPLYAE--TDFKLFVGNLSWSVT 56
M + E+ A + NL+ E GR ++VN+++ K KP P+ + T + LF+ NL +
Sbjct: 136 MGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQAR 195
Query: 57 TESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
+ L + F NVV A V++ RS GYGFV + +K E +TAL S G GR +
Sbjct: 196 AKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPL 255
Query: 116 RVSLAQGRR 124
RV A+ RR
Sbjct: 256 RV--ARSRR 262
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L N+ W+ T + + F++YG V+ + ++ R+RG F+ + E AL +
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 105 LNGVELEGRAMRVSLAQGRR 124
L ELEGRA++V+ A ++
Sbjct: 149 LESYELEGRAIKVNYANPQK 168
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW SL AF +G VV A+V+ D E+GR RG+GFV +S + A+
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAISE 96
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++G +L GR +RV+ A R S
Sbjct: 97 MDGKDLNGRNIRVNPANDRPS 117
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 55/79 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ F+G L+WS + L F+++G ++ A+V+ D SGRSRG+GFV + K M+ A+
Sbjct: 6 EYRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+++NG++L+GR + V AQ
Sbjct: 66 DAMNGMDLDGRTITVDRAQ 84
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSW+ SL Q F+E+G V A V+ D ++GRSRG+GFV +ST E A+ +
Sbjct: 3 KLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMNA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRQIRVDKATER 81
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
K++VGNLS+ V + L QAF++ G V ++ D SGRS+G+GFV S+ AE + A+E
Sbjct: 1 MKIYVGNLSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIE 60
Query: 104 SLNGVELEGRAMRVSLAQ 121
LNG EL+GRA+ V+ A+
Sbjct: 61 GLNGKELKGRAINVNEAR 78
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G +S+ +SL +AF YG V+ ARV+ D +GRSRG+GFV Y++ E A+
Sbjct: 32 KLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITG 91
Query: 105 LNGVELEGRAMRVSLAQ 121
++G +L+GR +RVS A
Sbjct: 92 MDGKDLQGRIVRVSYAH 108
>gi|46446527|ref|YP_007892.1| nucleic acid-binding protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400168|emb|CAF23617.1| probable nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 112
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNLSW + E L F+ +G VV A+++ D +G+S+G+GFV + + E A+
Sbjct: 3 KIFVGNLSWKTSEEQLKAHFEAFGKVVSAKIVTDQMTGKSKGFGFVEMESANDAENAIRE 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG L R++RVSLAQ R
Sbjct: 63 LNGKPLVDRSLRVSLAQER 81
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLSWS + L AF YG V + V+ D E+GRSRG+GFV ++T E A+
Sbjct: 4 KLYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAMGQ 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
++ EL+GR +RV++A +
Sbjct: 64 MDQTELDGRTIRVNVANAK 82
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S + M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A I ++GR+ LG+ ++VN++ P + + F +FVG+LS +TT+ + AF +G
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAFAPFG 119
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 120 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLYAETDFKL----------------FV 48
D I+ + G+ GR +R N++ KP PK + + +L +
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +++ A+ S+NG
Sbjct: 208 GGVTTGLTEQIMRQTFSPFGQIMEIRVFPE------KGYSFVRFNSHEAAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 SIEGYVVK 269
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L W V L +AF +G V ARV+ D E+GRSRG+GFV YS + A+ +
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G E++GR +RV++A R
Sbjct: 98 MDGKEIDGRQVRVNMANER 116
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 RVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWA 173
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 8 NAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFVGN 50
NA++ ++ G+ GR +R N++ + P E + K ++ G
Sbjct: 153 NAIV-HMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG +
Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI 265
Query: 111 EGRAMR 116
EG ++
Sbjct: 266 EGHVVK 271
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG+L W V L +AF +YG ++ A VL D ++GRSRG+GFV ++ A+ + A++
Sbjct: 7 KLFVGSLPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAIQE 66
Query: 105 LNGVELEGRAMRVSLAQGR 123
+NG +++GR + V+ A+ R
Sbjct: 67 MNGADMDGRNIVVNEARPR 85
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T E+L F+E+G V A V+ D ++GRSRG+GFV YS + + A+++
Sbjct: 3 KLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAIDA 62
Query: 105 LNGVELEGRAMRVSLA 120
+N VE +GR +RV A
Sbjct: 63 MNNVEFDGRTIRVDRA 78
>gi|297843010|ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS--------DKPK-----PKLPLYAETDFKLF 47
M ++ I +LDG E GR +RV +S P+ PK L E+ +K++
Sbjct: 161 MGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGARRNPEVLNSTPKKILMYESQYKVY 220
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGNL W + L F ++G +V RVL+D ++G++R + F+ ++ E + AL SLNG
Sbjct: 221 VGNLPWFTQPDGLRDHFSKFGTIVSTRVLHDRKTGKNRVFAFLSFTNSEERDAAL-SLNG 279
Query: 108 VELEGRAMRV 117
+ EGR + V
Sbjct: 280 TQYEGRRIIV 289
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P+ +L+V N+ S L FQ +G V+ V + ++G SRG G+V +
Sbjct: 106 PVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSIN 165
Query: 97 EMETALESLNGVELEGRAMRV 117
+ A+ SL+G E+ GR MRV
Sbjct: 166 SAKIAIASLDGTEVGGREMRV 186
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W ++L Q F+E+G V A V+ D ++GRSRG+GFV Y+ E + A+++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNEEFDGRRIRVDKASDR 81
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W ++L Q F+E+G V A V+ D ++GRSRG+GFV Y+ E + A+++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNEEFDGRRIRVDKASDR 81
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 76 MNGRKIMGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 134
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 135 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 181
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 158 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 217
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 218 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 271
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 272 TIEGHVVK 279
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + AL ++
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 76
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 77 NGRKIMGKEVKVNWA 91
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKIMGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 127 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 173
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 150 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 263
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 264 TIEGHVVK 271
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + AL ++
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 69 NGRKIMGKEVKVNWA 83
>gi|395325784|gb|EJF58201.1| hypothetical protein DICSQDRAFT_67439, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 94
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 54/74 (72%)
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NLSW+ T ++L AF YG ++ + V+ D ++GRSRG+GFV +S+ +E ++A+ SLN E
Sbjct: 1 NLSWNTTDDNLRNAFSTYGQILDSIVMRDRDTGRSRGFGFVTFSSGSEAQSAIASLNEQE 60
Query: 110 LEGRAMRVSLAQGR 123
L+GR ++V+LA R
Sbjct: 61 LDGRRIKVNLANAR 74
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W L AF +G ++ RV+ D E+GRSRG+GFV Y T E + A+E+
Sbjct: 38 KLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEA 97
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G L+GR +RV+ A R+
Sbjct: 98 MDGRVLDGRTIRVNYATQRQ 117
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 149 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 207
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 208 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 254
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 231 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 290
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 291 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 344
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 345 TIEGHVVK 352
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A I ++GR+ LG+ ++VN++ P + + F +FVG+LS +TT+ + AF +G
Sbjct: 61 ATIAAMNGRKILGKEVKVNWATTPTSQKK-DTSSHFHVFVGDLSPEITTDDIKAAFGPFG 119
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ RV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 120 KISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSD-KPKPK----------------LPLYAETDFKLFV 48
D I+ + G+ GR +R N++ KP PK + + ++ ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G+++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 TIEGYVVK 269
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S M
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A + ++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G
Sbjct: 61 ASLAAMNGRKIMGKEVKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTEDVKAAFAPFG 119
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 120 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWA 171
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+++ G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G +S +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVSSGLTEQLMRQTFSAFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 261
Query: 109 ELEGRAMR 116
++G ++
Sbjct: 262 SIDGHVVK 269
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +L ++
Sbjct: 9 LYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAASLAAM 66
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L W V L +AF +G V ARV+ D E+GRSRG+GFV YS + A+ +
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G E++GR +RV++A R
Sbjct: 98 MDGKEIDGRQVRVNMANER 116
>gi|406985531|gb|EKE06283.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 83
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+GNLSW VT++ L F +G V+ A V+ D +GRSRG+GFV T+ + ALE
Sbjct: 3 KLFIGNLSWEVTSDDLRAFFASFGTVIDAVVIMDRMTGRSRGFGFVEMETEEQANKALEG 62
Query: 105 LNGVELEGRAMRVSLAQ 121
NG +L+GRAM V++A+
Sbjct: 63 -NGKDLKGRAMNVNMAK 78
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Query: 11 IENLDGREYLGRILRVNFSDKP---KPKLPLYAE---TDFKLFVGNLSWSVTTESLTQAF 64
I++++GR+ +R N++ P L + E F +FVG+L+ + E L QAF
Sbjct: 78 IQDMNGRKIFNYEIRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAF 137
Query: 65 QEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
E+G + A V++D SG+SRG+GFV + K + E A+ ++NG L R +R + A
Sbjct: 138 SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWA 193
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 30/138 (21%)
Query: 6 DCNAVIENLDGREYLG-RILRVNFSDK--------PKP-----------KLPLYAETDFK 45
D I ++G E+LG R +R N++ + P+P + P Y +
Sbjct: 170 DAERAIATMNG-EWLGTRPIRCNWATQKGQTAMPAPQPGQQLPYEVVVQQTPAYVTS--- 225
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGN+ +V+ L Q FQ +G V + D RG+ FV T A+ L
Sbjct: 226 IYVGNIPLNVSQNDLVQPFQRFGYVQEVKFQAD------RGFAFVKMDTHENAANAIVHL 279
Query: 106 NGVELEGRAMRVSLAQGR 123
+ + G ++S + R
Sbjct: 280 QNMSINGNVTKLSWGKDR 297
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR--SRGYGFVCYSTKAEMETALE 103
++VGNL VT L + F G VV +++ + + YGFV ++ E A++
Sbjct: 20 IYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAIQ 79
Query: 104 SLNGVELEGRAMRVSLAQ 121
+NG ++ +R + AQ
Sbjct: 80 DMNGRKIFNYEIRANWAQ 97
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 10 VIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGN 69
+++L+GR G+ LRVN++ + + + + F++FVG+L+ + + L +AFQ G
Sbjct: 79 ALQSLNGRVLHGQELRVNWAFQKDQRED--SASQFQIFVGDLASDINDKLLCEAFQSCG- 135
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRR 124
ARV++D +GRS+GYGFV + T+A+ E AL ++G L R +R AQ ++
Sbjct: 136 CADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQHKQ 190
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL VT L + F G V +++ D +G S GYGFV + + AL+SL
Sbjct: 24 LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAADMALQSL 83
Query: 106 NGVELEGRAMRVSLA 120
NG L G+ +RV+ A
Sbjct: 84 NGRVLHGQELRVNWA 98
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL+ V+ L A ++G V+ ++ R GY F +++ A+ A+ L
Sbjct: 218 VYVGNLAPDVSDAELQTAVSQFGAVLDVKIY------RKGGYAFAQFASHADAVRAIVGL 271
Query: 106 NGVELEGRAMRVS 118
+G L G+A++ S
Sbjct: 272 SGQNLGGKALKCS 284
>gi|325290560|ref|YP_004266741.1| RNP-1 like RNA-binding protein [Syntrophobotulus glycolicus DSM
8271]
gi|324965961|gb|ADY56740.1| RNP-1 like RNA-binding protein [Syntrophobotulus glycolicus DSM
8271]
Length = 84
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL W+ ++E LT+ F E+GNV+G+R++ D E+GRSRG+GFV + + + E E L
Sbjct: 5 LYVGNLPWATSSEELTEYFAEFGNVIGSRIITDRETGRSRGFGFVEVADE-DAERLAEEL 63
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG + GR++ V+ A+ R++
Sbjct: 64 NGKDFNGRSLTVNEARPRQT 83
>gi|301087136|gb|ADK60785.1| chloroplast ribonucleoprotein [Arachis diogoi]
Length = 146
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D KLFVGNL +SV + L + F+ G V V+YD SGRSRG+GFV S+ E E A
Sbjct: 67 DLKLFVGNLPFSVDSAQLAELFESAGTVEVVEVIYDKMSGRSRGFGFVTMSSIEEAEAAK 126
Query: 103 ESLNGVELEGRAMRV 117
+ +G EL+GRA+RV
Sbjct: 127 QQFDGYELDGRALRV 141
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A + ++GR+ +G+ ++VN++ P + F +FVG+LS +TTE + AF +G
Sbjct: 62 ASLAAMNGRKIMGKEVKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTEDVKAAFGPFG 120
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 121 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWA 172
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+++ G+ GR +R N++ + P E + K ++
Sbjct: 149 DAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYC 208
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G +S +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 209 GGVSTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNGS 262
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 263 SIEGHIVK 270
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +L ++
Sbjct: 10 LYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAASLAAM 67
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 68 NGRKIMGKEVKVNWA 82
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 35 KLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYST 94
K P E LFVG LSWS+ E L + F+ G V+ ARV+ + +G+SRGYG+V + +
Sbjct: 189 KKPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDS 248
Query: 95 KAEMETALESLNGVELEGRAMRVSLAQGR 123
K+ E AL+ G EL+GR + + ++ G+
Sbjct: 249 KSAAEKALQEYQGKELDGRPINLDMSTGK 277
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 10 VIENLDGREYLGRILRVNFSD-KPKPKLP-----------LYAETDFKLFVGNLSWSVTT 57
++ G+E GR + ++ S KP P A +D LFVGNLS++
Sbjct: 255 ALQEYQGKELDGRPINLDMSTGKPHASNPNTDRAKQFGDVPSAPSD-TLFVGNLSFNAER 313
Query: 58 ESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
+SL F EYG VV R+ ++ + +G+G+V +S+ E + ALE+LNG L+GRA R+
Sbjct: 314 DSLFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYLDGRACRL 373
Query: 118 SLAQGR 123
+ R
Sbjct: 374 DFSTPR 379
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S M
Sbjct: 13 SDVEYRCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S M
Sbjct: 11 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMR 70
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 71 SAIEGMNGKELDGRNITVNEAQ 92
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 12/120 (10%)
Query: 14 LDGREYLGRILRVNFSDKPKP----------KLPLYAETDFKLFVGNLSWSVTTESLTQA 63
L G E GR +RV+ S PKP + P A T LF+GNLS++VT + + ++
Sbjct: 243 LTGTELDGREIRVDVST-PKPPRDGNRQGRKEAPQSAPTT-TLFLGNLSFNVTEDEIRES 300
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
F +YG +V R D ++G +G+G+V Y + A+E LNGVE+ GR++R+ A GR
Sbjct: 301 FSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSLRLDYAGGR 360
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 29 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 88
+ KPK + P+ + +FVGNLSW+V E L F + G V AR++ D E+GR++G+G
Sbjct: 172 TKKPKTEEPVNST----VFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFG 227
Query: 89 FVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+V + + A+ TA +L G EL+GR +RV ++
Sbjct: 228 YVTFES-ADALTAAMALTGTELDGREIRVDVS 258
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 11 IENLDGREYLGRILRVNFS-DKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGN 69
++ L GR+ +RVN++ + + T + +FVG+LS V E L +AF +G+
Sbjct: 168 LQTLGGRKIFDTEIRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAFAAFGS 227
Query: 70 VVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+ ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 228 LSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 281
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR-SRGYGFVCYSTKAEMETALES 104
L+VGNLS VT L + F G V G +++ D YGFV Y ETAL++
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 170
Query: 105 LNGVELEGRAMRVSLA 120
L G ++ +RV+ A
Sbjct: 171 LGGRKIFDTEIRVNWA 186
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P Y T ++ GNL T L FQ +G +V R+ D RG+ FV T
Sbjct: 321 PAYNTT---VYTGNLVPYSTQADLIPLFQGFGYIVEIRMQAD------RGFAFVKMDTHE 371
Query: 97 EMETALESLNGVELEGRAMRVSLAQGRRS 125
A+ +L G + GR ++ S + R S
Sbjct: 372 NAAMAIVNLTGTPVHGRPLKCSWGKDRAS 400
>gi|357131533|ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV LSWS SL AF +G V R++YD SGRSRG+GFV +S E + A ++
Sbjct: 48 KLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCAKDA 107
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G + GR++++S A G+
Sbjct: 108 MDGKVMLGRSLKISYALGK 126
>gi|410659225|ref|YP_006911596.1| RNA-binding region RNP-1 [Dehalobacter sp. DCA]
gi|410662211|ref|YP_006914582.1| RNA-binding region RNP-1 [Dehalobacter sp. CF]
gi|409021580|gb|AFV03611.1| RNA-binding region RNP-1 [Dehalobacter sp. DCA]
gi|409024567|gb|AFV06597.1| RNA-binding region RNP-1 [Dehalobacter sp. CF]
Length = 84
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL WS T+E LT+ F +GNV+G+R++ D E+GRSRG+GFV +++ + E E L
Sbjct: 5 LYVGNLPWSTTSEELTEYFARFGNVIGSRIITDRETGRSRGFGFVEVASE-DAERLAEEL 63
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG E R++ V+ A+ R++
Sbjct: 64 NGSEFNDRSLTVNEARPRQT 83
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + F +FVG+LS V E L +AF +G +
Sbjct: 76 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSGHFHVFVGDLSPEVNDEVLAKAFAAFGTM 134
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 135 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 187
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTK 95
P A L+VGNLS VT LT+ F G V +++ D YGFV Y
Sbjct: 10 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDM 69
Query: 96 AEMETALESLNGVELEGRAMRVSLA-QGRRS 125
ETAL++LNG ++ +RV+ A QG+++
Sbjct: 70 RAAETALQTLNGRKIFDTEIRVNWAYQGQQN 100
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 126
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 173
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 150 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 210 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 263
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 264 TIEGHVVK 271
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ SL + F +YG V+ ARV+ D E+GRSRG+GF+ + + E +A+++
Sbjct: 41 KLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQA 100
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G +L GR ++V+ A +R
Sbjct: 101 MDGQDLHGRRIKVNYATEKR 120
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV L QAF E+G +V A+V+ + ++GRS+G+GFV + AE A+E+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 105 LNGVELEGRAMRVSLAQ 121
+NG L+GRA+ V+ A+
Sbjct: 64 MNGHSLQGRALTVNEAR 80
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV L QAF E+G +V A+V+ + ++GRS+G+GFV + AE A+E+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 105 LNGVELEGRAMRVSLAQ 121
+NG L+GRA+ V+ A+
Sbjct: 64 MNGHSLQGRALTVNEAR 80
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT E L AF +YGNV ++ D E+GR RG+GFV S++AE A+++L
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG E GR ++V+ A+ R
Sbjct: 63 NGAEWMGRQLKVNKARPR 80
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 84 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 142
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 143 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 166 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 225
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G + +T + + Q F +G ++ RV + +GY F+ +ST A+ S+NG
Sbjct: 226 GGIGSGLTEQLMRQTFGVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNGT 279
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 280 TIEGHVVK 287
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 85 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 143
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 144 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P ET+ K ++
Sbjct: 167 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYC 226
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 227 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 280
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 281 TIEGHVVK 288
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 74 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 132
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 133 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 156 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 215
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 216 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 269
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 270 TIEGHVVK 277
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 84 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 142
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 143 RVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 166 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 225
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G +V R +GY FV +ST A+ S+NG
Sbjct: 226 GGIASGLTDQLMRQTFSPFGQIVETRAF------PVKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 280 TIEGHVVK 287
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 74 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 132
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 133 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 156 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 215
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 216 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 269
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 270 TIEGHVVK 277
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 85 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 143
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 144 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 167 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 226
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 227 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 280
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 281 TIEGHVVK 288
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 148 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 206
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 207 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 253
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E K ++
Sbjct: 230 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYC 289
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 290 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 343
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 344 TIEGHVVK 351
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 143 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 201
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 202 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 248
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 225 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 284
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 285 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 338
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 339 TIEGHVVK 346
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 122 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 180
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 181 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 227
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 204 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSSKNCTVYC 263
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G + ++ + + Q F +G ++ RV + +GY F+ +ST A+ S+NG
Sbjct: 264 GGIGAGLSEQLMRQTFGVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNGT 317
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 318 TIEGHVVK 325
>gi|449518978|ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD------------KPKPKLPLYAETDFKLFV 48
M ++ I LDG + GR +RV F+ PK + E+ +K++V
Sbjct: 148 MGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYKVYV 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW V L F +G VV A+VL D +G+SR YGF+ +S+ AE + ++ SL+G
Sbjct: 208 GNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASI-SLDGT 266
Query: 109 ELEGRAMRV 117
E R + V
Sbjct: 267 EYNNRKLVV 275
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+V NL S L + F+ YG V+ A V + E+G S+G G+V + + ++ +
Sbjct: 101 ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITA 160
Query: 105 LNGVELEGRAMRVSLA 120
L+G ++ GR MRV A
Sbjct: 161 LDGSDVGGREMRVRFA 176
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T ++L Q F+++G + A V+ D ++ RSRG+GFV ++T AE + A++
Sbjct: 3 KLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAIDG 62
Query: 105 LNGVELEGRAMRVSLA 120
+N E +GR +RV A
Sbjct: 63 MNNQEFDGRVIRVDRA 78
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPL------------YAETDFKLFV 48
+T E E +DG E GR +R + KP+PK +E LFV
Sbjct: 51 FATHEQAKKAKEEMDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFGDKPSEPSSTLFV 110
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSWS T +++ F EYG V R+ + E+GR +G+G+V + + A E+L G
Sbjct: 111 GNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIEGAKKAYEALAGA 169
Query: 109 ELEGRAMRVSLAQGRRS 125
EL+GR +R+ +Q R S
Sbjct: 170 ELDGRNIRLDYSQPRDS 186
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG L + V + L Q F ++G++ A V+ D ++G SRG+G+V ++T + + A E +
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEM 64
Query: 106 NGVELEGRAMRVSLA 120
+G EL+GR +R A
Sbjct: 65 DGYELDGRNIRTGTA 79
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 197 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 255
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 256 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 302
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 279 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 338
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 339 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 392
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 393 TIEGHVVK 400
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 85 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 143
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 144 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 167 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 226
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 227 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 280
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 281 TIEGHVVK 288
>gi|449445537|ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 286
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSD------------KPKPKLPLYAETDFKLFV 48
M ++ I LDG + GR +RV F+ PK + E+ +K++V
Sbjct: 150 MGSINSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYKVYV 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLSW V L F +G VV A+VL D +G+SR YGF+ +S+ AE + ++ SL+G
Sbjct: 210 GNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASI-SLDGT 268
Query: 109 ELEGRAMRV 117
E R + V
Sbjct: 269 EYNNRKLVV 277
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+V NL S L + F+ YG V+ A V + E+G S+G G+V + + ++ +
Sbjct: 103 ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITA 162
Query: 105 LNGVELEGRAMRVSLA 120
L+G ++ GR MRV A
Sbjct: 163 LDGSDVGGREMRVRFA 178
>gi|345879103|ref|ZP_08830782.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223892|gb|EGV50316.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 93
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+ ++VGNLSW+ T + L + F YG V A+V+ D E+GRSRG+GFV S + ++A+
Sbjct: 2 EMNIYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAI 61
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
+SLN +L GR++RV+ A+ R
Sbjct: 62 DSLNDSQLGGRSLRVNEAKPR 82
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKP---KPKLPLYAET-------DFKLFVGNLSWSVTTESLTQA 63
++GR+ LG+ ++VN++ P K LP+ F +FVG+LS +TTE + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDIKSA 127
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 128 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 184
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 161 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 220
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 221 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 274
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 275 TIEGHVVK 282
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
PK + LF G+LSW V +L +AF+ +GN+V ARV+ D +GRSRG+G+V +
Sbjct: 193 PKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFG 252
Query: 94 TKAEMETALESLNGVELEGRAMRVSLAQGR 123
A E++ G E++GRA+ + A +
Sbjct: 253 DSESATKAYEAMQGQEIDGRALNLDYANAK 282
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 20/138 (14%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSD-KPKPKLP--------------LYAETDFKLFVG 49
E E + G+E GR L +++++ KP P L AE+D LFVG
Sbjct: 255 ESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGDTLSAESDT-LFVG 313
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NL + +++ Q F E V R+ D +SG +G+G+V +++ + ++AL++ NG
Sbjct: 314 NLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDAKSALDAKNGAS 373
Query: 110 L----EGRAMRVSLAQGR 123
+ RA+R+ A R
Sbjct: 374 IGNGRNSRAVRLDFAGSR 391
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ T +SL +AF +YGN+ V+ D E+GR RG+GFV Y + + A+++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G +++S+ +SL +AF +YG VV RV+ D E+GRSRG+GFV +++ +A+++
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G +L GR ++V+ A R
Sbjct: 101 LDGRDLHGRVVKVNYANDR 119
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 56/82 (68%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+E +++ FVG L+W+ L + F ++G V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 2 SEVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMK 61
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
A++ +NG EL+GR + V+ AQ
Sbjct: 62 DAIDEMNGKELDGRTITVNEAQ 83
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA------ETDFKLFVGNLSWS 54
M++ E+ A ++ D E GRILRV + + K P E ++ NL+W
Sbjct: 133 MASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARHVIYASNLAWK 192
Query: 55 VTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V + L + F E + + AR+++D SG++ GYGF+ Y TK E E A+ +L+G EL GR
Sbjct: 193 VRSTHLREFFTENFKAPLSARIVFDTPSGKTTGYGFISYLTKEEAEAAISALDGKELMGR 252
Query: 114 AMRVSLAQGR 123
++ + +++ +
Sbjct: 253 SLFLKISEKK 262
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V NL WS++ + F + G V ++ G+ GR +GY FV ++ E + A++
Sbjct: 87 KLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIR-GKDGRGKGYAFVTMASGEEAQAAVDK 145
Query: 105 LNGVELEGRAMRVSLAQ 121
+ +EL GR +RV LA+
Sbjct: 146 FDTLELSGRILRVELAK 162
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 74 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 132
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 133 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 179
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 156 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 215
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 216 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 269
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 270 TIEGHVVK 277
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 121 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 179
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 180 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 226
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 203 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 262
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 263 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 316
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 317 AIEGHVVK 324
>gi|224149436|ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|222836937|gb|EEE75330.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L WS +L +AF YG V+ ARV+ D E+GRSRG+GFV Y + A +
Sbjct: 15 KLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSYDSSESASEAQSA 74
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G EL GR +RVS A+ R
Sbjct: 75 MDGQELGGRNVRVSFAEER 93
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + F +FVG+LS V E L +AF +G +
Sbjct: 73 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTL 131
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 184
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG+++
Sbjct: 76 LNGRKIFDTEIRVNWAYQGQQN 97
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 7 CNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAET---------DF---KLFVGNLSWS 54
+A I LDG + GR +RVN S + + P DF K++ GNLSW
Sbjct: 70 ADACIAALDGADVDGRAIRVNVSVAREDRPPRPDRPPRDGQRRGYDFDGRKVYFGNLSWG 129
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRA 114
+ L E+G V AR++ D E+ RSRG+GFV ST AE E + LNG +++GR
Sbjct: 130 MDHLDLQDLCGEFGTVEDARLITDRETNRSRGFGFVTMSTVAEAEEVVNQLNGQDVDGRV 189
Query: 115 MRVSLAQ 121
+RV++A
Sbjct: 190 LRVNIAN 196
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
+ E KL+VGNLSW VT +SL F +YG V+ D +GRSRG+GFV +A
Sbjct: 10 AVSGEEGVKLYVGNLSWGVTNDSLADVFNQYG-ASDVTVVTDMNTGRSRGFGFVTVPDQA 68
Query: 97 EMETALESLNGVELEGRAMRVSLA 120
+ + +L+G +++GRA+RV+++
Sbjct: 69 VADACIAALDGADVDGRAIRVNVS 92
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LSWSV +SL AF +G V R+ YD SGRSRG+GFV ++ + + +A ++
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 105 LNGVELEGRAMRVSLA 120
++G L GR +R+S A
Sbjct: 102 MDGKGLLGRPLRISFA 117
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + L ++ F +FVG+LS +TTE + A
Sbjct: 65 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAA 124
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 181
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 158 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYC 217
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 218 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 271
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 272 TIEGHVVK 279
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TT+ + AF +G + A
Sbjct: 67 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDA 125
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 126 RVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 172
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 25/129 (19%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE------------------TDFKLF 47
D I ++ G+ GR +R N++ + KP P + + ++
Sbjct: 149 DAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKSVQDNSAKQLRFDEVVNQSSPQNCTVY 207
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
G + +T + Q F +G ++ RV + +GY F+ +S+ A+ S+NG
Sbjct: 208 CGGIQSGLTEHLMRQTFSPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSVNG 261
Query: 108 VELEGRAMR 116
+EG ++
Sbjct: 262 TTIEGHVVK 270
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 84 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 142
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 143 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 166 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 225
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 226 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 279
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 280 TIEGHVVK 287
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 84 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 142
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 143 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E K ++
Sbjct: 166 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYC 225
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 226 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 279
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 280 TIEGHVVK 287
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S++ +SL+ AF +YG V+ AR++ D ESGRS+G+GFV Y+T E +A+++
Sbjct: 45 KLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQA 104
Query: 105 LNGVELEGRAMRVSLAQ 121
L+G +L GR + V+ A
Sbjct: 105 LDGQDLYGRRVGVNFAN 121
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 88 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 146
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 147 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 193
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 170 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 229
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 230 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 283
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 284 TIEGHVVK 291
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TT+ + AF +G + A
Sbjct: 67 MNGRKILGKEVKVNWATTPSSQKKD-TSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDA 125
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 126 RVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 172
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 25/129 (19%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAE------------------TDFKLF 47
D I ++ G+ GR +R N++ + KP P + + ++
Sbjct: 149 DAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKNTQDASPKQLRYEDVVNQSSPQNCTVY 207
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
G + ++ + Q F +G ++ RV + +GY F+ +S+ A+ S+NG
Sbjct: 208 CGGIQSGLSDHLMRQTFSPFGQIMEIRVFPE------KGYSFIRFSSHESAAHAIVSVNG 261
Query: 108 VELEGRAMR 116
+EG ++
Sbjct: 262 TTIEGHIVK 270
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L++G+L++SVT ESL AF+++G V +V+ D +S RS+G+GFV + + + A+E
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N ELEGR ++V +++ R
Sbjct: 63 MNEQELEGRRIKVDVSRPR 81
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+S+ V E L Q F + G VV R+++D E+G+ +GYGF Y+ E+A+ +L
Sbjct: 25 VFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQTAESAIRNL 84
Query: 106 NGVELEGRAMRV-SLAQGRRS 125
NG EL GR +RV S A G RS
Sbjct: 85 NGYELNGRQLRVDSAAGGERS 105
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 170 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 228
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 229 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 275
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 252 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 311
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 312 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 365
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 366 TIEGHVVK 373
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A + ++GR+ +G+ ++VN++ P + F +FVG+LS +TT+ + AF +G
Sbjct: 62 ASLAAMNGRKIMGKEVKVNWATSPSSQKK-DTSNHFHVFVGDLSPEITTDDIRAAFAPFG 120
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 121 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 172
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P ET+ K ++
Sbjct: 149 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYC 208
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 209 GGVTTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 262
Query: 109 ELEGRAMR 116
LEG ++
Sbjct: 263 SLEGHIVK 270
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 84 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKAAFAPFGKISDA 142
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 143 RVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A + ++GR+ +G+ ++VN++ P + F +FVG+LS +TT+ + AF +G
Sbjct: 66 ASLAAMNGRKIMGKEVKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTDDVKAAFGPFG 124
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 125 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 176
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 153 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYC 212
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G +S +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 213 GGVSTGLTEQLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGS 266
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 267 SIEGHVVK 274
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K+FVGNL +SV L + F ++G VV A+V+ D SGRSRGYGFV ++ + A++
Sbjct: 4 KIFVGNLPFSVDNRKLEEEFAKFGQVVSAKVIMDRNSGRSRGYGFVEFTDPGSAQAAVDG 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N +EGR + VSLA+ +
Sbjct: 64 MNDQPIEGRKLTVSLAKNQ 82
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKP---KPKLPLYAET-------DFKLFVGNLSWSVTTESLTQA 63
++GR+ LG+ ++VN++ P K LP+ F +FVG+LS +TTE + A
Sbjct: 68 MNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTEDIKSA 127
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 128 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 184
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 161 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 220
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 221 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 274
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 275 TIEGHVVK 282
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ SL AF +YG+V A V+ D E+GRSRG+GFV + ++ + AL +
Sbjct: 8 KLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHA 67
Query: 105 LNGVELEGRAMRVSLA 120
+NG L+GR +RV LA
Sbjct: 68 MNGESLDGRQIRVDLA 83
>gi|345864924|ref|ZP_08817119.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345124004|gb|EGW53889.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 91
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++VGNLSW+ T + L + F YG V A+V+ D E+GRSRG+GFV S + ++A++
Sbjct: 1 MNIYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAID 60
Query: 104 SLNGVELEGRAMRVSLAQGR 123
SLN +L GR++RV+ A+ R
Sbjct: 61 SLNDSQLGGRSLRVNEAKPR 80
>gi|303284108|ref|XP_003061345.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla
CCMP1545]
gi|226457696|gb|EEH54995.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla
CCMP1545]
Length = 301
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
A + ++ V NL W+ T+E L Q FQ+ GNVV A + ++GRS+G+G V + T+ + +
Sbjct: 218 ASSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVKADAVCHADTGRSKGWGTVLFETREQAQ 277
Query: 100 TALESLNGVELEGRAMRVSL 119
A++ NGVELE R M++ L
Sbjct: 278 AAIQGFNGVELESRPMQIKL 297
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEY------GNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
+ ++GNL+W T ESL AF++Y G+VV A V GRS+G+G V + + A
Sbjct: 118 RCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVAKQ-PGGRSKGWGLVDFESPAAA 176
Query: 99 ETALESLNGVELEGRAMRVSL 119
E+A+ +L+ +L+GR++ V L
Sbjct: 177 ESAIATLHNSDLQGRSIIVRL 197
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL WS + L F G + + G GRSRGYG V YS+ AE + A+
Sbjct: 9 RLYVGNLPWSTDVDELRAIFSSCGAITHVDIP-KGRQGRSRGYGIVEYSSAAEAQAAIAQ 67
Query: 105 LNGVELEGRAMRV 117
L G L R + V
Sbjct: 68 LEGHTLGDRNLTV 80
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L++G+L++SVT ESL AF+++G V +V+ D ES RS+G+GFV + + + A+E
Sbjct: 3 RLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N ELEGR ++V +++ R
Sbjct: 63 MNEQELEGRRIKVDVSKPR 81
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%)
Query: 17 REYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVL 76
+ +L R ++ N+S+ P F +FVG+LS V T+ L +AF +G + RV+
Sbjct: 21 KTFLSREMKGNWSNSPAGSTKPDTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVV 80
Query: 77 YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
D ++ +S+GYGFV + K + ETA+ ++NG L GR +R + A R
Sbjct: 81 RDPQTQKSKGYGFVSFLRKQDAETAINAMNGQWLGGRVIRTNWATRR 127
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 31/139 (22%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDK----------------PKPKL-PLY-------- 39
+D I ++G+ GR++R N++ + PK PL
Sbjct: 100 QDAETAINAMNGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQA 159
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+ T+ ++ G L ++ E + + F YG + RV D +GY FV ++TK
Sbjct: 160 SPTNCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKD------KGYAFVRFATKESAT 213
Query: 100 TALESLNGVELEGRAMRVS 118
A+ +++ ++ G+ ++ S
Sbjct: 214 HAIVAVHNTDVNGQIVKCS 232
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSW +T ESL +AF+ G +V ARV+ D E+G+SRG+G+V + A + ALE +
Sbjct: 290 VFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE-M 348
Query: 106 NGVELEGRAMRVSLAQGR 123
G EL+GR + V L+ R
Sbjct: 349 AGTELDGRTINVDLSAPR 366
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 7 CNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK------------LFVGNLSWS 54
A +E + G E GR + V+ S P+P T K +FVGNLS+
Sbjct: 342 AKAALE-MAGTELDGRTINVDLS-APRPPRDGPGATPKKQFNDELSAPSQTVFVGNLSFE 399
Query: 55 VTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE---SLNGVELE 111
T +++ ++F ++G V RV D E+GR +G+ +V + + A++ S G+E++
Sbjct: 400 STQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVDQGRSSEGLEID 459
Query: 112 GRAMRVSLAQGRR 124
GR +R+ +Q R+
Sbjct: 460 GRRVRLDFSQPRQ 472
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
FK++VGNL++ T ++L Q F++YG V +++ D +SG S+G+GFV S++ E A+
Sbjct: 3 FKIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAIS 62
Query: 104 SLNGVELEGRAMRVSLAQGRR 124
+LN ELEGR +RV+ A RR
Sbjct: 63 ALNQHELEGRQLRVNKAHERR 83
>gi|224128049|ref|XP_002320231.1| predicted protein [Populus trichocarpa]
gi|222861004|gb|EEE98546.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS-------DKPK-----PKLPLYAETDFKLFV 48
M +VE + LDG + GR +RV +S P+ P L+ E+ KL+V
Sbjct: 149 MGSVESARNAVSALDGSDVGGREMRVRYSVEISSGRRNPEALNSAPTKHLFYESPHKLYV 208
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL WS + L F +G VV ARVL D + G++R Y F+ + + AE + AL S+NG
Sbjct: 209 GNLPWSTKPDELRNLFNHFGIVVSARVLSDRKGGKNRTYAFLSFLSDAERDAAL-SMNGT 267
Query: 109 ELEGRAMRV 117
E R + V
Sbjct: 268 EFYDRMLVV 276
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+V NL S L + F+ +G+V+ V + E+G SRG G++ + A+ +
Sbjct: 102 ELYVCNLPRSSDIADLVEMFKPFGSVLSVEVSRNPETGVSRGCGYITMGSVESARNAVSA 161
Query: 105 LNGVELEGRAMR----VSLAQGRRS 125
L+G ++ GR MR V ++ GRR+
Sbjct: 162 LDGSDVGGREMRVRYSVEISSGRRN 186
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ SL F +YG V+ A+++ D ESGRSRG+GF+ Y++ E A+ +
Sbjct: 35 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITA 94
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G L+GR +RV+ A R
Sbjct: 95 MDGKTLDGRNIRVNHANER 113
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR R +RVN++ + + F +FVG+LS V + L QAF +G V
Sbjct: 141 MSTLNGR----REIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTV 196
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GR+RGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 197 SEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQK 249
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG L VT + L Q F+ G+V +++ D ++ + YGFV Y E A+ +L
Sbjct: 86 LYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAAERAMSTL 144
Query: 106 NGVELEGRAMRVSLA 120
NG R +RV+ A
Sbjct: 145 NG----RREIRVNWA 155
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ + A+ +N
Sbjct: 299 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDSHENAAMAICQMN 352
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 353 GYNVNGRPLKCSWGKDK 369
>gi|383767221|ref|YP_005446202.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381387489|dbj|BAM04305.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 112
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
K++VGNL+W TTE L F YG+V A VL D E+GRSRG+GFV + + + A++
Sbjct: 1 MKMYVGNLAWRTTTEDLEALFSNYGSVSDAIVLTDRETGRSRGFGFVTMGDE-DAKKAID 59
Query: 104 SLNGVELEGRAMRVSLAQGR 123
+L+G + EGR +RV+ AQ R
Sbjct: 60 ALDGSDFEGRPLRVNEAQER 79
>gi|344924967|ref|ZP_08778428.1| RNA-binding region RNP-1 [Candidatus Odyssella thessalonicensis
L13]
Length = 94
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V NL +SV ++L Q F ++G VV A+V+ D SGRS+G+GFV ++ + +A+E
Sbjct: 4 KLYVSNLPYSVNDQTLAQLFGDHGAVVSAKVITDKMSGRSKGFGFVEMESEQQANSAMEK 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG +L GR M V++A+
Sbjct: 64 LNGQDLNGRRMNVAIAR 80
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS+ SL F +YG V+ A+++ D ESGRSRG+GF+ Y++ E A+ +
Sbjct: 32 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITA 91
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G L+GR +RV+ A R
Sbjct: 92 MDGKTLDGRNIRVNHANER 110
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Query: 2 STVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLT 61
+ D + ++ L+G + +++N + + + ++ F LFVG+L+ + ++L+
Sbjct: 127 AKAHDASVALQTLNGIQIENNKVKINRAFQSQQSTT--DDSTFNLFVGDLNIDIDDDTLS 184
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
++F+++ + + A V++D ++GRSRGYGFV ++ + + + A+E + G EL GR +R++ A
Sbjct: 185 RSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINWAT 244
Query: 122 GR 123
R
Sbjct: 245 KR 246
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 29 SDKPKPKLPLYAE------TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESG 82
++K P +P A +D L+VGNL S+T + L Q FQ G +V +V+ D +S
Sbjct: 58 ANKEPPVVPANATHGGRETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSN 117
Query: 83 RSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
Y FV Y+ + AL++LNG+++E ++++ A
Sbjct: 118 YV-NYAFVEYAKAHDASVALQTLNGIQIENNKVKINRA 154
>gi|344301362|gb|EGW31674.1| hypothetical protein SPAPADRAFT_62285 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ F +FVG+LS + E L QAF ++ ++ A V++D ++ RSRGYGFV +S +++ E
Sbjct: 160 DPSFNIFVGDLSPEINDEKLKQAFSKFKSLKQAHVMWDMQTSRSRGYGFVTFSNQSDAEL 219
Query: 101 ALESLNGVELEGRAMRVSLAQGRR 124
AL+++NG L GRA+R + A ++
Sbjct: 220 ALQTMNGEWLNGRAIRCNWASHKQ 243
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS S++ E L F G + ++L D ++ Y F+ Y + AL ++
Sbjct: 73 LYVGNLSKSISEEFLKDTFASAGAIQSVKILND-KNKPGFNYAFIEYENNQAADMALNTM 131
Query: 106 NGVELEGRAMRVSLA 120
NG L+ ++++ A
Sbjct: 132 NGKILQNFEIKINWA 146
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E F +FVG+LS V E L AF ++G++ A V++D ++ RSRGYGFV +S +A+ E
Sbjct: 172 EPLFNIFVGDLSPEVNDEGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAEL 231
Query: 101 ALESLNGVELEGRAMRVSLAQGRR 124
AL+++NG L GRA+R + A ++
Sbjct: 232 ALQTMNGEWLGGRAIRCNWASHKQ 255
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL S + E + F GN + L + ++ Y F+ Y + + AL +L
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTL 143
Query: 106 NGVELEGRAMRVSLA 120
NG ++ ++V+ A
Sbjct: 144 NGRVIDESEIKVNWA 158
>gi|71013156|ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
gi|46098217|gb|EAK83450.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
Length = 192
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF YG + V+ D E+GRSRG+GFV ++T+AE + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSTYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LN EL+GR +RV++A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + L ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W +L Q F+E+G V A V+ D ++GRSRG+GFV Y+ +A+ ++A+ +
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIAA 62
Query: 105 LNGVELEGRAMRVSLA 120
+N VE +GR +RV A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|323702365|ref|ZP_08114030.1| RNP-1 like RNA-binding protein [Desulfotomaculum nigrificans DSM
574]
gi|333924078|ref|YP_004497658.1| RNP-1 like RNA-binding protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532671|gb|EGB22545.1| RNP-1 like RNA-binding protein [Desulfotomaculum nigrificans DSM
574]
gi|333749639|gb|AEF94746.1| RNP-1 like RNA-binding protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 85
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL W+ E LT AF +YG V+G+RV+ D E+GRSRG+GFV + + E + +L
Sbjct: 4 LYVGNLPWATKAEDLTDAFSQYGEVLGSRVITDRETGRSRGFGFVEVRDE-DAEKMIAAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG EL GR + V+ A+ R
Sbjct: 63 NGTELGGRVITVNEAKSR 80
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + L ++ F +FVG+LS +TTE + A
Sbjct: 80 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAA 139
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 140 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 196
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 173 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYC 232
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 233 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 286
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 287 TIEGHVVK 294
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG LSW++ L + F+ G V+GARV+ + +G+SRGYG+V + +K+ E ALE +
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + + ++ G+
Sbjct: 230 QGKEIDGRPINLDMSTGK 247
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 10 VIENLDGREYLGRILRVNFS-----------DKPKPKLPLYAETDFKLFVGNLSWSVTTE 58
+E + G+E GR + ++ S D+ K + LF+GNLS++ +
Sbjct: 225 ALEEMQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNLSFNANRD 284
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+L F EYGNV+ RV ++ + +G+G+V +S+ E + ALE++NG +EGR R+
Sbjct: 285 NLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLD 344
Query: 119 LAQGR 123
+ R
Sbjct: 345 FSTPR 349
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG LSW++ L + F+ G V+GARV+ + +G+SRGYG+V + +K+ E ALE +
Sbjct: 170 LFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEM 229
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + + ++ G+
Sbjct: 230 QGKEIDGRPINLDMSTGK 247
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 10 VIENLDGREYLGRILRVNFS-----------DKPKPKLPLYAETDFKLFVGNLSWSVTTE 58
+E + G+E GR + ++ S D+ K + LF+GNLS++ +
Sbjct: 225 ALEEMQGKEIDGRPINLDMSTGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNLSFNANRD 284
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+L F EYGNV+ RV ++ + +G+G+V +S+ E + ALE++NG +EGR R+
Sbjct: 285 NLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLD 344
Query: 119 LAQGR 123
+ R
Sbjct: 345 FSTPR 349
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT+E L+ F EYG V ++ D E+GRSRG+GFV T+AE + A++ L
Sbjct: 3 IYVGNLSYQVTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFVEMETEAEEDAAIQEL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E GR+++V+ A+ R
Sbjct: 63 DGAEWMGRSLKVNKAKPR 80
>gi|385808623|ref|YP_005845019.1| RRM domain-containing protein [Ignavibacterium album JCM 16511]
gi|383800671|gb|AFH47751.1| RRM domain protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG+L WSV L F+ YG V A+V+ D ++ RS+G+GFV + T+AE A+ +
Sbjct: 4 KLFVGSLPWSVNDAELKTLFEPYGKVASAKVVTDKQTRRSKGFGFVEFETEAEASAAINA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG E++GR + VS A+ +
Sbjct: 64 LNGSEVKGRNIIVSEAKPK 82
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 68
A + ++GR+ +G+ ++VN++ P + F +FVG+LS +TT+ + AF +G
Sbjct: 61 ASLAAMNGRKIMGKEVKVNWATTPTSQKK-DTSNHFHVFVGDLSPEITTDDVKAAFGPFG 119
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 120 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 171
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I+ + G+ GR +R N++ + P E++ K ++
Sbjct: 148 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYC 207
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G +S +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 208 GGVSTGLTEQLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGS 261
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 262 SIEGHVVK 269
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +L ++
Sbjct: 9 LYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYEHRHAAASLAAM 66
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + F +FVG+LS V+ E L +AF +G +
Sbjct: 65 LQTLNGRKIFDTEIRVNWAYQGSQNKE-DTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTL 123
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 124 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 176
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG ++
Sbjct: 68 LNGRKIFDTEIRVNWAYQGSQN 89
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
>gi|343427628|emb|CBQ71156.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 175
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF YG + V+ D E+GRSRG+GFV ++T+AE + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+ EL+GR +RV++A R
Sbjct: 64 LHDQELDGRRIRVNMANSR 82
>gi|42521960|ref|NP_967340.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|39574490|emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 120
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL +SV E+L Q F ++G V A+V+ D E+GRS+G+GFV S + + A+E
Sbjct: 4 KLYVGNLPYSVDDEALHQHFAQFGAVDSAKVIMDRETGRSKGFGFVEMSDDSAADQAIER 63
Query: 105 LNGVELEGRAMRVSLAQ 121
NG+EL GR + +S A+
Sbjct: 64 GNGIELGGRPINISEAR 80
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 54/76 (71%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
+ +++ FVG L+W+ +L AF +YG+V+ ++++ D E+GRSRG+GFV + + M+
Sbjct: 4 GDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMK 63
Query: 100 TALESLNGVELEGRAM 115
A+E +NG +L+GR++
Sbjct: 64 DAIEGMNGQDLDGRSI 79
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E AL+S++ L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQK 262
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L++G L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 93 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGMNYGFVEYDDPGAAERAMQ 151
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 152 TLNGRRIHQSEIRVNWA 168
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R+ D RG+ F+ T A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFQNFGYVVETRLQAD------RGFAFLKMDTHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + R
Sbjct: 366 GYQVNGRPLKCSWGKDR 382
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 6 DCNAVIENLDGREYLGRILRVNF-SDKPKPKLPLYAET--DFKLFVGNLSWSVTTESLTQ 62
D ++ I ++ R LGR LRVN+ S + + P +T +FVG+LS + T L +
Sbjct: 63 DASSAITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLRE 122
Query: 63 AFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
AF +G + RV+ D + +S+GYGFV ++ K + E A+ +++G L RA+R + A
Sbjct: 123 AFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWA 180
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 5 EDCNAVIENLDGREYLGRILRVNF-SDKPKPK------------------LPLYAETDFK 45
+D I +DG R +R N+ S KP K + ++
Sbjct: 156 QDAENAIHTMDGSWLGSRAIRTNWASRKPNHKETGSYIGGHHRALNYDEVFAQSSPSNCT 215
Query: 46 LFVGNLSWSVTTES-LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
++ G L+ ++E L QAF E+G +V R+ D +GY F+ +++K A+ +
Sbjct: 216 VYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKD------KGYAFIKFNSKESACRAIVA 269
Query: 105 LNGVELEGRAMRVSLAQ 121
+ ++ G+A++ S +
Sbjct: 270 RHNSDIGGQAVKCSWGK 286
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL VT + + F + G + G ++++ E G S Y FV + ++ +A+ ++
Sbjct: 15 LYVGNLDSGVTEDLVCALFSQMGQIKGCKIIH--EPG-SDPYCFVEFVNHSDASSAITAM 71
Query: 106 NGVELEGRAMRVSLA 120
N GR +RV+ A
Sbjct: 72 NARMCLGRELRVNWA 86
>gi|328774055|gb|EGF84092.1| hypothetical protein BATDEDRAFT_84811 [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+GNL+WSV ++L AF +G ++ + D ESGR+RG+ FV + A+E+
Sbjct: 36 KLFIGNLAWSVDEQTLANAFAVHGELIECNIARDRESGRARGFAFVTFQDDDAALKAIEA 95
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG E+ RA+RVS A R
Sbjct: 96 LNGAEIADRAIRVSEAISR 114
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+S SL ++F YG V+ +V+ D E+GRSRG+GFV ++T + +A++
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L GR +RV+ A R
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+S SL ++F YG V+ +V+ D E+GRSRG+GFV ++T + +A++
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L GR +RV+ A R
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|122890334|emb|CAJ74077.1| RNA recognition motif 1 [Guillardia theta]
Length = 199
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
KLFVG LSW V + L +AFQE+GN A+V+ D SGRSRG+GFV +S + A+E
Sbjct: 88 LKLFVGGLSWEVDDQQLMEAFQEFGNCE-AKVMVDRYSGRSRGFGFVTFSEEHSAAKAIE 146
Query: 104 SLNGVELEGRAMRVSLAQ 121
+NG EL GR + V+ A+
Sbjct: 147 EMNGRELLGRQITVTHAR 164
>gi|79316226|ref|NP_001030925.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189111|gb|AEE27232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 294
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS--------DKPK-----PKLPLYAETDFKLF 47
M ++ I +LDG E GR +RV +S P+ PK L E+ K++
Sbjct: 157 MGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVY 216
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGNL W + L F ++G +V RVL+D ++GR+R + F+ +++ E + AL S NG
Sbjct: 217 VGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAAL-SFNG 275
Query: 108 VELEGRAMRV 117
+ EGR + V
Sbjct: 276 TQYEGRRIIV 285
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLY-DGESGRSRGYGFVCYSTK 95
P+ +L+V N+ S L FQ +G V+ V+ + ++G SRG G+V +
Sbjct: 101 PVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSI 160
Query: 96 AEMETALESLNGVELEGRAMRV 117
+ A+ SL+G E+ GR MRV
Sbjct: 161 NSAKIAIASLDGTEVGGREMRV 182
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSWS T +L Q F+ +G + A ++ D E+GRSRG+GFV + ++ A+
Sbjct: 4 KLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVSE 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L+GR + VS+A+ +
Sbjct: 64 LNGKDLDGRNIVVSVAEDK 82
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 8 NAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEY 67
+ + L+GR+ +RVN++ + + + +FVG+LS V + L++AF +
Sbjct: 78 DQALTTLNGRKIFDAEIRVNWAYQGNQNKE-DTQHHYHVFVGDLSPEVNDDVLSKAFGAF 136
Query: 68 GNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
G++ ARV++D SG+SRGYGF+ + KA+ E A+ S+NG L RA+RV+ A +
Sbjct: 137 GSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR-GYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G VV A+++ D YGFV Y+ + AL +
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALTT 83
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG ++
Sbjct: 84 LNGRKIFDAEIRVNWAYQGNQN 105
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E + ++VGNL T L FQ YG +V R+ D RG+ FV T
Sbjct: 254 EFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQAD------RGFAFVKLDTHQNAAL 307
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+ L + GR ++ S + + S
Sbjct: 308 AITHLQNQLVHGRPIKCSWGKDKGS 332
>gi|15223293|ref|NP_171616.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]
gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 293
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS--------DKPK-----PKLPLYAETDFKLF 47
M ++ I +LDG E GR +RV +S P+ PK L E+ K++
Sbjct: 156 MGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVY 215
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGNL W + L F ++G +V RVL+D ++GR+R + F+ +++ E + AL S NG
Sbjct: 216 VGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAAL-SFNG 274
Query: 108 VELEGRAMRV 117
+ EGR + V
Sbjct: 275 TQYEGRRIIV 284
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P+ +L+V N+ S L FQ +G V+ V + ++G SRG G+V +
Sbjct: 101 PVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSIN 160
Query: 97 EMETALESLNGVELEGRAMRV 117
+ A+ SL+G E+ GR MRV
Sbjct: 161 SAKIAIASLDGTEVGGREMRV 181
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 54/79 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ F+G L+WS + L AF+++G + A+V+ D SGRSRG+GFV + K M+ A+
Sbjct: 6 EYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAI 65
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+++NG++L+GR + V Q
Sbjct: 66 DAMNGMDLDGRTITVDKTQ 84
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + +FVG+LS VT + L++AF +G +
Sbjct: 45 LQTLNGRKIFDTEIRVNWAYQGTTNKE-DTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTL 103
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 104 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 156
>gi|376316225|emb|CCF99622.1| RNA recognition motif-containing protein [uncultured Flavobacteriia
bacterium]
Length = 83
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
+FVGNL+W V L +AF+ +G V ARV+ D E+GRSRG+GFV + E + AL+
Sbjct: 1 MNIFVGNLAWGVDDVVLREAFEAFGAVDSARVITDRETGRSRGFGFVEMPNQEEAQAALD 60
Query: 104 SLNGVELEGRAMRVSLAQGR 123
+ G +LEGR +R + +Q R
Sbjct: 61 GMEGKDLEGRPIRCNESQPR 80
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSWS+ E L + F+ G VVGARV+Y+ + RSRGYG+V + K+ E A++ +
Sbjct: 173 IFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKAIQEM 232
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + V ++ +
Sbjct: 233 QGKEIDGRPINVDMSTSK 250
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 7 CNAVIENLDGREYLGRILRVNFS--------DKPKPKLPLYAETDFKLFVGNLSWSVTTE 58
I+ + G+E GR + V+ S D+ K + +E LF+GNLS++ +
Sbjct: 225 AEKAIQEMQGKEIDGRPINVDMSTSKPAGGNDRAKKFGDVPSEPSDTLFLGNLSFNADKD 284
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
++ + F +YG ++ R+ E+ + +G+G+V +S + + ALE L G ++ RA+R+
Sbjct: 285 NIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGEYIDNRAVRLD 344
Query: 119 LAQGR 123
+ R
Sbjct: 345 YSTPR 349
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
+ L+GR+ +RVN++ + + + +FVG+LS V + L++AF +G++
Sbjct: 81 LTTLNGRKIFDAEIRVNWAYQGNQNKE-DTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSL 139
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + KA+ E A+ S+NG L RA+RV+ A +
Sbjct: 140 SEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR-GYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G VV A+++ D YGFV Y+ E AL +
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALTT 83
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG ++
Sbjct: 84 LNGRKIFDAEIRVNWAYQGNQN 105
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E + ++VGNL T L FQ YG +V R+ D RG+ FV T
Sbjct: 254 EFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQAD------RGFAFVKLDTHQNAAL 307
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+ L + GR ++ S + + S
Sbjct: 308 AITHLQNQLVHGRPIKCSWGKDKGS 332
>gi|156367085|ref|XP_001627250.1| predicted protein [Nematostella vectensis]
gi|156214154|gb|EDO35150.1| predicted protein [Nematostella vectensis]
Length = 259
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
++K ++GNLS+SV ++L + F Y NVV +V+ D E+GR RG+GFV + ++ EM+ A+
Sbjct: 111 EYKCYIGNLSYSVDEQALEEKFHGY-NVVDVKVITDRETGRPRGFGFVTFGSEDEMDKAI 169
Query: 103 ESLNGVELEGRAMRVSLAQ 121
+ +G +L+GR M+V+ AQ
Sbjct: 170 DKFDGEDLDGRPMKVNKAQ 188
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+S+ VT E++ Q F + G+V+ ++++D E+G+ +GYGF+ + A +TA+ L
Sbjct: 14 VFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATADTAIRVL 73
Query: 106 NGVELEGRAMRVSLAQG 122
NG EL GR +RV A G
Sbjct: 74 NGYELGGRVLRVDSAAG 90
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ V E L + F EYG V V D E+GR RG+ FV TKAE +A+E+L
Sbjct: 3 IYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIETL 62
Query: 106 NGVELEGRAMRVSLAQGRR 124
+G E GR M+V A+ R+
Sbjct: 63 DGAEWMGRTMKVDEARPRK 81
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SVT SL Q F E G V A+V+ D +SGRS+G+GFV + E + A+
Sbjct: 4 KLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIRK 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G ++GRA+ V+ A+ R
Sbjct: 64 LHGASVDGRALVVNEARPR 82
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L W V L +AF +G V ARV+ D E+GRSRG+GFV YS + A+ +
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G E++GR +RV++A R
Sbjct: 98 MDGKEIDGRQVRVNMANER 116
>gi|168704512|ref|ZP_02736789.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 129
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGN+S+ T++ L QAF +YG V+GA+++ D E+GRSRG+ FV A E A+ +
Sbjct: 4 KLYVGNISFQTTSDDLIQAFSQYGTVLGAQIVADRETGRSRGFAFVEMHDGA--EEAIAA 61
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG +L GR + V+ A+ R
Sbjct: 62 LNGAQLSGRTLTVNEAKPR 80
>gi|407790590|ref|ZP_11137683.1| RNA recognition motif-containing protein [Gallaecimonas xiamenensis
3-C-1]
gi|407203713|gb|EKE73698.1| RNA recognition motif-containing protein [Gallaecimonas xiamenensis
3-C-1]
Length = 88
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFV NLS+ V ++L Q F +YG+V A ++ D E+GRSRG+GFV + KA E A+++L
Sbjct: 3 LFVSNLSFRVEADALAQLFGQYGDVQRAHIVKDKETGRSRGFGFVEMADKATGENAIKAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG + EGR + V+ A+ R
Sbjct: 63 NGQDFEGRPLVVNEARPR 80
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T E+L Q F ++G++ A V+ D ++ RSRG+GFV ++++ E E A+
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+N E +GR +RV A R S
Sbjct: 63 MNNQEFDGRTIRVDKAADRPS 83
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + K F +FVG+LS V E L++AF + ++
Sbjct: 74 LQTLNGRKIFDTEIRVNWAYQGNNKQE-DTTNHFHVFVGDLSPEVNDEILSKAFSGFKSI 132
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D +G+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 133 SDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWANQK 185
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGE-SGRSRGYGFVCYSTK 95
P++ L+VGNLS VT LT+ F G+V +++ D S YGFV Y+
Sbjct: 8 PIFEHRRAHLYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDM 67
Query: 96 AEMETALESLNGVELEGRAMRVSLA 120
ETAL++LNG ++ +RV+ A
Sbjct: 68 RAAETALQTLNGRKIFDTEIRVNWA 92
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 32/143 (22%)
Query: 6 DCNAVIENLDGREYLG-RILRVNFSDKPK-----------PKL-----PLYAETDFK--- 45
D I ++G E+LG R +RVN++++ P + PL E F+
Sbjct: 159 DAEQAISTMNG-EWLGSRAIRVNWANQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTP 217
Query: 46 -----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+++GNL+ T L FQ +G ++ R+ D RG+ FV +
Sbjct: 218 AYNTTVYIGNLTPYTTQADLVPIFQAFGYIIEVRMQAD------RGFAFVKLDSHENASM 271
Query: 101 ALESLNGVELEGRAMRVSLAQGR 123
A+ L G ++GR ++ S + R
Sbjct: 272 AIVQLQGTLIQGRPIKCSWGRDR 294
>gi|320162535|ref|YP_004175760.1| RNA-binding domain-containing protein [Anaerolinea thermophila
UNI-1]
gi|319996389|dbj|BAJ65160.1| RNA-binding region [Anaerolinea thermophila UNI-1]
Length = 105
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL +S + L AF YG V A V+ D SG+SRG+GFV +AE E A++ L
Sbjct: 3 IYVGNLPFSANEDDLRSAFAAYGTVTSAAVIKDQFSGQSRGFGFVEMPNQAEAEAAIQGL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG EL+GRA+RV+ A+ R
Sbjct: 63 NGKELKGRALRVNEARPR 80
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L++G+L++SVT ESL AF+++G V +V+ D +S RS+G+GFV + + + A+E
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N ELEGR ++V +++ R
Sbjct: 63 MNEQELEGRRIKVDVSRPR 81
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%)
Query: 29 SDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYG 88
+ +P L + K+F+G +S+ L +AF +YGNVV ++ D ++GRSRG+G
Sbjct: 25 ASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFG 84
Query: 89 FVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
FV Y++ E +A+++++G +L GR +RV+ A R
Sbjct: 85 FVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|363808212|ref|NP_001241976.1| uncharacterized protein LOC100803098 [Glycine max]
gi|255639493|gb|ACU20041.1| unknown [Glycine max]
Length = 191
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDK--PK----------PKLPLYAETDFKLFV 48
M+++ I LD ++ GR +RV FS + PK PK +Y E KL+V
Sbjct: 56 MASINSARKAIAALDASDFGGREVRVRFSAEMNPKRRNLETMNSSPKRVIYYEGPHKLYV 115
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLS S + L Q F +G V RVL D G R Y FV Y +++E + A+ SLNG
Sbjct: 116 GNLSRSAGPQDLKQLFGRFGIVASVRVLQDLRKGNRRVYAFVSYHSESERDAAM-SLNGT 174
Query: 109 ELEGRAMRV 117
E GR + +
Sbjct: 175 EFFGRVLVI 183
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG LSWS+ E L + F+ G V+ ARV+++ +G+SRGYG+V + +K+ E AL+
Sbjct: 237 LFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAEKALKEY 296
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + + ++ G+
Sbjct: 297 QGREIDGRPINLDMSTGK 314
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GNLS++ ++L++ F EYG++V R+ ++ + +G+G+V Y + E + ALE+L
Sbjct: 340 LFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALEAL 399
Query: 106 NGVELEGRAMRVSLAQGR 123
NG +EGR +R+ + R
Sbjct: 400 NGEYIEGRPVRLDFSAPR 417
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 8 NAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEY 67
+ + L+GR+ +RVN++ + + + +FVG+LS V + L++AF +
Sbjct: 78 DQALTTLNGRKIFDAEIRVNWAYQGNQNKE-DTQHHYHVFVGDLSPEVNDDVLSKAFGAF 136
Query: 68 GNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
G++ ARV++D SG+SRGYGF+ + KA+ E A+ S+NG L RA+RV+ A +
Sbjct: 137 GSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSR-GYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G VV A+++ D YGFV Y+ + AL +
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALTT 83
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG ++
Sbjct: 84 LNGRKIFDAEIRVNWAYQGNQN 105
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E + ++VGNL T L FQ YG +V R+ D RG+ FV T
Sbjct: 254 EFNTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQAD------RGFAFVKLDTHQNAAL 307
Query: 101 ALESLNGVELEGRAMRVSLAQGRRS 125
A+ L + GR ++ S + + S
Sbjct: 308 AITHLQNQLVHGRPIKCSWGKDKGS 332
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
+ ++ FVG L+W+ SL AF YG ++ ++++ D E+GRS G+GF+ +S++ M
Sbjct: 5 DVKYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRD 64
Query: 101 ALESLNGVELEGRAMRVSLAQ 121
A+E +NG EL+GR + V+ AQ
Sbjct: 65 AIEGMNGKELDGRNITVNEAQ 85
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGNLS+ ++ + L + F+EYGNV + D E+GR RG+ FV KA+ TA+E+L
Sbjct: 3 IFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E GR+++V+ A+ R
Sbjct: 63 DGAEWMGRSIKVNEARDR 80
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+GNL++ + E L + +EYG V +++ D ++GRS+G+GFV +TK + E+ +E+
Sbjct: 2 KLFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMEN 61
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG E +G+ ++V A+
Sbjct: 62 LNGAEFDGKVLKVDYAK 78
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+S+ V E L Q F + G VV R+++D ++G+ +GYGF Y+ E+A+ +L
Sbjct: 28 VFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 106 NGVELEGRAMRVSLAQG 122
NG EL GR +RV A G
Sbjct: 88 NGFELNGRPLRVDSAAG 104
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 78 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 136
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMR 116
RV+ D +G+S+GYGFV + K + E A+ + G L GR +R
Sbjct: 137 RVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 179
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++ G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+
Sbjct: 217 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 270
Query: 106 NGVELEGRAMR 116
NG +EG ++
Sbjct: 271 NGTTIEGHVVK 281
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+S+ V E L Q F + G VV R+++D ++G+ +GYGF Y+ E+A+ +L
Sbjct: 28 VFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 106 NGVELEGRAMRVSLAQG 122
NG EL GR +RV A G
Sbjct: 88 NGFELNGRPLRVDSAAG 104
>gi|258516441|ref|YP_003192663.1| RNP-1 like RNA-binding protein [Desulfotomaculum acetoxidans DSM
771]
gi|257780146|gb|ACV64040.1| RNP-1 like RNA-binding protein [Desulfotomaculum acetoxidans DSM
771]
Length = 82
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L++GNL WS E L +AF +YG+V+ ARV+ D E+GRSRG+GFV + + ++E + ++
Sbjct: 5 LYIGNLPWSTKAEDLEEAFSKYGDVINARVISDRETGRSRGFGFVEVNDE-DVEKFIAAM 63
Query: 106 NGVELEGRAMRVSLAQGR 123
NG +L GR + V+ A+ R
Sbjct: 64 NGTDLGGRVISVNEAKAR 81
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+F+ NLSW+V L + F EYG + A+V+ D E+G+SRG+GFV T+AE + A+E L
Sbjct: 3 IFISNLSWAVRDADLRELFAEYGEISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEEL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+ E +G+ + V++A+ R
Sbjct: 63 DQAEYDGKVISVNVAKPR 80
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+S+ V E L Q F + G VV R+++D ++G+ +GYGF Y+ E+A+ +L
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIRNL 87
Query: 106 NGVELEGRAMRVSLAQG 122
NG EL GR +RV A G
Sbjct: 88 NGFELNGRPLRVDSAAG 104
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNFS-DKPKPKLP-------------LYAETDFKLFV 48
TVE A + G + R L ++FS +P+ + P + + LFV
Sbjct: 316 TVEAATAALNAKKGTDLDNRPLNLDFSTPRPEGQNPRDRASSRASQHGDVPSRPSDTLFV 375
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNLS+ T +S+T+ FQEYG + + E G +G+G+V +S+ E + A E+L G
Sbjct: 376 GNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEALQGA 435
Query: 109 ELEGRAMRVSLAQGR 123
EL GR+MR+ A R
Sbjct: 436 ELNGRSMRLDFAAPR 450
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L + F+E+G R++ D +GRS+G+G+V + T AL +
Sbjct: 269 LFVGNLSWNVDEEWLGREFEEFGPKA-VRIVTDRATGRSKGFGYVEFETVEAATAALNAK 327
Query: 106 NGVELEGRAMRVSLAQGR 123
G +L+ R + + + R
Sbjct: 328 KGTDLDNRPLNLDFSTPR 345
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG +S+S SL ++F YG V+ +V+ D E+GRSRG+GF+ ++T + +A++
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQG 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L GR +RV+ A R
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++ R+ LG+ ++VN++ P + +FVG+LS + T+ L +AF +G +
Sbjct: 58 MNKRQCLGKEMKVNWATSPGNTPKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDC 117
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D ++ +S+GYGFV + K + E A+ ++NG L RA+R + A
Sbjct: 118 RVVRDPQTLKSKGYGFVSFVKKTDAENAIATMNGQWLGSRAIRTNWA 164
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL SVT E + F + G V+G ++++ E G Y FV ++ AL ++
Sbjct: 2 LYVGNLDPSVTEELILALFTQIGPVIGCKIIH--EPGND-PYCFVEFTDHQAAAAALLAM 58
Query: 106 NGVELEGRAMRVSLA 120
N + G+ M+V+ A
Sbjct: 59 NKRQCLGKEMKVNWA 73
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 57/83 (68%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+F LFVG+LS + +SL F ++ + V A V++D ++GRSRGYGFV + + ET L
Sbjct: 244 NFTLFVGDLSPEIDDDSLAATFSKFPSFVQANVMWDMKTGRSRGYGFVSFQNNQDAETVL 303
Query: 103 ESLNGVELEGRAMRVSLAQGRRS 125
+++NG+ L GR++R++ A R++
Sbjct: 304 QTMNGMSLGGRSIRLNWAVRRQN 326
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYG-NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
L+VGN+ SV+ + L F G + ++LYD ++ R Y F+ Y + E AL++
Sbjct: 159 LYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYD-KNKRGFNYAFIEYEDHXKAENALQA 217
Query: 105 LNGVELEGRAMRVSLA 120
LNG L ++++ A
Sbjct: 218 LNGTVLANYPLKITWA 233
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNNSHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E AL+S++ L RA+R + A +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQK 263
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L++G L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 94 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGMNYGFVEYDDPGAAERAMQ 152
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 153 TLNGRRIHQSEIRVNWA 169
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R+ D RG+ F+ T A+ LN
Sbjct: 313 YVGNLTPYTTQNDLVPLFQNFGYVVETRLQAD------RGFAFLKMDTHENAAMAICQLN 366
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + R
Sbjct: 367 GYQVNGRPLKCSWGKDR 383
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T E+L Q F ++G++ A V+ D ++ RSRG+GFV ++++ E E A+
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
+N E +GR +RV A R S
Sbjct: 63 MNNQEFDGRTIRVDKAADRPS 83
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDF-----KLFVGNLSWSVTTESLTQAFQEYG 68
LDG E++GR +RV D +P +T++ K+FV NLS+ +SL QAF+++G
Sbjct: 141 LDGTEFMGRTIRV---DDAQPAQGRSTDTNYGPKTDKVFVANLSYDTDEDSLKQAFEKFG 197
Query: 69 NVVGARVL-YDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+VG L ++GR RG ++ + T+ E E A++ +NGV L+GR +R +
Sbjct: 198 TIVGEIGLPISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYLDGRPIRTDFS 250
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG L++ T E + F + G V R+ +SRG+ + + T AE + A +L
Sbjct: 83 VFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDF-TSAEGKQAAMAL 141
Query: 106 NGVELEGRAMRVSLAQ 121
+G E GR +RV AQ
Sbjct: 142 DGTEFMGRTIRVDDAQ 157
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 65/113 (57%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR +RVN++ + F +FVG+LS V E L QAF +G+V
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D ++GRSRGYGFV + + E AL+S++ L RA+R + A +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQK 262
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETALE 103
L++G L VT + L Q F+ G+V +++ D ++ +S+G YGFV Y E A++
Sbjct: 93 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGMNYGFVEYDDPGAAERAMQ 151
Query: 104 SLNGVELEGRAMRVSLA 120
+LNG + +RV+ A
Sbjct: 152 TLNGRRIHQSEIRVNWA 168
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T L FQ +G VV R+ D RG+ F+ T A+ LN
Sbjct: 312 YVGNLTPYTTQNDLVPLFQNFGYVVETRLQAD------RGFAFLKMDTHENAAMAICQLN 365
Query: 107 GVELEGRAMRVSLAQGR 123
G ++ GR ++ S + R
Sbjct: 366 GYQVNGRPLKCSWGKDR 382
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VG LSW+V + L F++YG V+ ARV D +SGRSRG+G+V ++T AE A +
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 106 NGVELEGRAMRVSLAQGR 123
+G EL+GRA+RV L R
Sbjct: 456 HGKELDGRALRVDLQPAR 473
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 16 GREYLGRILRVNFSDKPKPKLPLYAETDFK------------LFVGNLSWSVTTESLTQA 63
G+E GR LRV+ P+ AE+ K LF+G L+W++T + + A
Sbjct: 457 GKELDGRALRVDLQPARGPQD--RAESRAKHFKDERSAPSNTLFIGGLAWALTEDDIWNA 514
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
F E+G V G R+ + +SGR +G+G+V + ++ ALE++NG L GR +R+ A R
Sbjct: 515 FAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRIDFAGKR 574
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT + L+ AF EYG V + + D E+GRSRG+GFV S++ E + A+++L
Sbjct: 3 IYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAIDAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E +GR+++V+ A+ R
Sbjct: 63 DGAEWKGRSLKVNKARPR 80
>gi|343427629|emb|CBQ71155.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 192
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNLSW+ T +SL AF YG + V+ D E+GRSRG+GFV ++T+AE + A+ +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+ EL+GR +RV++A R
Sbjct: 64 LHDQELDGRRIRVNMANSR 82
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S
Sbjct: 7 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXR 66
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 67 SAIEGMNGKELDGRNITVNEAQ 88
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 13 NLDGREYLGRILRVNFSDKPKPKLPLYA-------ETDFKLFVGNLSWSVTTESLTQAFQ 65
+LDGRE ++ S++ P L A E+ +K++VGNL+WSV + L + F
Sbjct: 166 DLDGREMFVKLASHVVSNRRNPSLSHTAPMKDHIFESPYKIYVGNLAWSVQPQHLRELFT 225
Query: 66 EYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+ GN+V R+L D + R+R YGF+ +S+ E++ AL+ LN GR + V A
Sbjct: 226 QCGNIVSTRLLTDRKGARNRVYGFLSFSSPEELDAALK-LNNTNFHGRDIIVREAH 280
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+LFV NL + L FQ YG V+ V D E+G SRG GFV + A TA+ +
Sbjct: 102 ELFVCNLPRRCGVDDLLHLFQPYGTVLSVEVSRDPETGISRGCGFVTMRSLAAARTAMNA 161
Query: 105 LNGVELEGRAMRVSLA 120
L+G +L+GR M V LA
Sbjct: 162 LDGFDLDGREMFVKLA 177
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + F +FVG+LS V + L +AF +G +
Sbjct: 75 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTM 133
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG+++
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQN 99
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 14 LDGREYLGRILRVNFSDKP-KPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 72
++ R L R ++VN++ +P + + + F +FVG+LS V + L +AFQ +G+V
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 73 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
A+V+ D + +S+GYGFV Y + E E A+E +NG L R +R + A
Sbjct: 61 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 108
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+S+ V E L Q F + G VV R+++D ++G+ +GYGF Y+ E+A+ +L
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 106 NGVELEGRAMRVSLAQG 122
NG EL GR +RV A G
Sbjct: 88 NGFELNGRPLRVDSAAG 104
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLSW VT L F YG+VV A+V+ D ++GRS+G+GFV T E + A+
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITG 100
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G +EGR + V+ A+ ++
Sbjct: 101 MHGQVIEGRPLTVNEARPKK 120
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 53/75 (70%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSWSV E L F+ G+V+GARV+Y+ + RSRGYG+V +S+K+ E A++ +
Sbjct: 180 IFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERAVKEM 239
Query: 106 NGVELEGRAMRVSLA 120
+G +++GR + ++
Sbjct: 240 HGKQIDGREINCDMS 254
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 10 VIENLDGREYLGRILRVNFS----------DKPKPKLPLYAETDFKLFVGNLSWSVTTES 59
++ + G++ GR + + S D+ K + ++ LF+GNLS++ +
Sbjct: 235 AVKEMHGKQIDGREINCDMSTSKPAGGNGGDRAKKFGDVPSQPSDTLFLGNLSFNADRDQ 294
Query: 60 LTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSL 119
+ + F ++G ++ R+ E+ + +G+G+V Y + ++AL++L G ++ R +R+
Sbjct: 295 IYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALDALQGEYIDNRPVRLDF 354
Query: 120 A 120
+
Sbjct: 355 S 355
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LS++ +L F YG+V+ AR++ D ++G+S+GYGF+ Y++ E A+ +
Sbjct: 32 KLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTA 91
Query: 105 LNGVELEGRAMRVSLAQ 121
++G +L+GR +RVS A
Sbjct: 92 MDGKDLQGRIVRVSTAN 108
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+LF+G LS+ + +SL ++F EYG V+ AR+++D E+GRSRG+GF+ +++ E A+
Sbjct: 41 RLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAITG 100
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G +L GR + V+ A R
Sbjct: 101 MDGKDLHGRLVHVNYATER 119
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 56/81 (69%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
FK++VGNL++ T ++L Q F++YG V +++ D +SG S+G+GFV +++ E A+
Sbjct: 3 FKIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAIS 62
Query: 104 SLNGVELEGRAMRVSLAQGRR 124
+LN ELEGR +RV+ A RR
Sbjct: 63 ALNQHELEGRQLRVNKAHERR 83
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+L+ +TTE + AF +G + A
Sbjct: 67 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDA 125
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D +G+S+GYGFV + K + E A+ +++G L GR +R + A
Sbjct: 126 RVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWA 172
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 8 NAVIENLDGREYLGRILRVNFSDK--PKPK---------------LPLYAETDFKLFVGN 50
NA+I N+ G+ GR +R N++ + P PK + + + ++ G
Sbjct: 152 NAII-NMSGQWLGGRQIRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSSPQNCTVYCGG 210
Query: 51 LSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVEL 110
+ ++ + Q F +G ++ RV + +GY F+ +S+ A+ S+NG +
Sbjct: 211 IQSGLSEHLMRQTFSPFGQIMEVRVFPE------KGYSFIRFSSHDSAAHAIVSVNGTVI 264
Query: 111 EGRAMR 116
EG ++
Sbjct: 265 EGHVVK 270
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL +S+T +SL + F+++G+V +V+ D SGRS+G+ FV S E E A+E L
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG EL+GR + V+ A+ R
Sbjct: 63 NGHELDGRTIVVNKAKPR 80
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL +SVT L F E+GNV A+V+ D E+GRS+G+GFV ++ + A+ +
Sbjct: 4 KIYVGNLPYSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAISA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G+ ++GR++ V+LA+ R
Sbjct: 64 LHGMSVDGRSIVVNLARPR 82
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG LSW+ L F+E+G V A V+ D ++GRSRG+GFV Y+ A+ E A+ +
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIAN 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
++G E +GR +RV A R
Sbjct: 63 MDGQEFDGRRVRVDKASDR 81
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W+ +L AF +G V +++ D ++GRSRG+GFV +++ E E AL+
Sbjct: 46 KLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQE 105
Query: 105 LNGVELEGRAMRVSLA 120
++G EL GR +RV A
Sbjct: 106 MDGRELAGRQIRVDYA 121
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 14 LDGREYLGRILRVNFSDKPKPK-------------LPLYAETDFKLFVGNLSWSVTTESL 60
++GR+ LG+ ++VN++ P + + L + F +FVG+LS +TTE +
Sbjct: 67 MNGRKILGKEVKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFVGDLSPEITTEDI 126
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 KSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 186
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E K ++
Sbjct: 163 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYC 222
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 223 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 276
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 277 TIEGHVVK 284
>gi|383142217|gb|AFG52468.1| Pinus taeda anonymous locus CL931Contig1_02 genomic sequence
Length = 85
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL WSV + L + F++ G+V V+YD ++GRSRG+ FV +T+ + ++A+
Sbjct: 16 DIKVFVGNLPWSVDSAKLAELFKDPGDVTMVEVIYDRQTGRSRGFAFVTMATQEDADSAV 75
Query: 103 ESLNGVELEG 112
E LNG E +G
Sbjct: 76 EKLNGYEYQG 85
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V E L +AF +G +
Sbjct: 75 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTL 133
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG+++
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQN 99
>gi|20159727|gb|AAM11915.1| plastid-specific ribosomal protein 2 precursor [Deschampsia
antarctica]
Length = 114
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Query: 21 GRILRVNFSDKPKPKL--------PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 72
GR ++VN ++ P + P + ++ +K++VGNL+ +VT E L F E G V+
Sbjct: 7 GRKIKVNVTESFLPNIDPSAPEAEPAFVDSQYKVYVGNLAKTVTMEVLKNFFSEKGEVLS 66
Query: 73 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
A V + +S+G+GFV +S+ E+E A+ + N ELEG+A+RV+ A
Sbjct: 67 ATVSRVPGTPKSKGFGFVTFSSDEEVEAAVSTFNNTELEGQAIRVNRA 114
>gi|163847418|ref|YP_001635462.1| RNP-1 like RNA-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222525267|ref|YP_002569738.1| RNP-1 like RNA-binding protein [Chloroflexus sp. Y-400-fl]
gi|163668707|gb|ABY35073.1| RNP-1 like RNA-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222449146|gb|ACM53412.1| RNP-1 like RNA-binding protein [Chloroflexus sp. Y-400-fl]
Length = 100
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL+WSV +L FQ+YG+V ARV+ D E+GRSRG+GFV A++ T +
Sbjct: 4 KLFVGNLAWSVDDATLEAFFQDYGDVRSARVINDRETGRSRGFGFVEMEV-ADVATVISQ 62
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
NG + GR +RV+ A+ + S
Sbjct: 63 TNGRPINGREIRVNEAEDKGS 83
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T ++L Q F+++G V A V+ D ++ RSRG+GFV +S+ ++ + A+++
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMDA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRTIRVDKASER 81
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W +L Q F+E+G V A V+ D ++GRSRG+GFV Y A+ ++A+ +
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIAA 62
Query: 105 LNGVELEGRAMRVSLA 120
+N VE +GR +RV A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 32 PKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVC 91
P P P +L+VG+L +++T + L F+ +G + +++ D E+GRS+GYGF+
Sbjct: 346 PPPFQPKAHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFIT 405
Query: 92 YSTKAEMETALESLNGVELEGRAMRV 117
Y + + ALE LNG EL GR M+V
Sbjct: 406 YHNADDAKKALEQLNGFELAGRPMKV 431
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W +L Q F+E+G V A V+ D ++GRSRG+GFV Y +++ E A+ +
Sbjct: 3 KLFIGGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAITA 62
Query: 105 LNGVELEGRAMRVSLA 120
+N +E +GR +RV A
Sbjct: 63 MNNIEFDGRTIRVDKA 78
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 16/135 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNF--------------SDKPKPKLPLYAETDFKL 46
M ++ + I LDG + GR + V S P K ++ E+ +K+
Sbjct: 176 MRSLAEARTAINALDGFDLDGREMFVKLAAHVIASRRNPGGLSHTPPMKDHIF-ESRYKI 234
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+WSV + L + F + G VV R+L D + GRSR YGF+ +S+ E+E AL+ LN
Sbjct: 235 YVGNLAWSVQPQHLREHFTKCGTVVSTRLLTDRKGGRSRVYGFLSFSSAEELEAALQ-LN 293
Query: 107 GVELEGRAMRVSLAQ 121
E GR + V A
Sbjct: 294 NTEFHGRDIIVREAH 308
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 31 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 90
+P+P+ +LFV NL + L + F YG V+ V D E+G SRG GFV
Sbjct: 124 RPRPR---------ELFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFV 174
Query: 91 CYSTKAEMETALESLNGVELEGRAMRVSLA 120
+ AE TA+ +L+G +L+GR M V LA
Sbjct: 175 TMRSLAEARTAINALDGFDLDGREMFVKLA 204
>gi|356520229|ref|XP_003528766.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 277
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 8 NAVIENLDGREYLGRILRVNFSDK------------PKPKLPLYAETDFKLFVGNLSWSV 55
NAV LDG + GR LRV FS + K Y E+ KL+VGNL+ +V
Sbjct: 149 NAVAA-LDGSDVGGRELRVRFSIEMNSKRRSFNKMNSSTKRISYYESPHKLYVGNLAKTV 207
Query: 56 TTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAM 115
E L F +GNVV ARVL+D + G SR Y F+ + ++AE + A+ SLNG E GR +
Sbjct: 208 RPEQLRDLFSRFGNVVSARVLHDFKQGNSRVYAFLSFQSEAERDAAM-SLNGTEYYGRTL 266
Query: 116 RV 117
V
Sbjct: 267 IV 268
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+++V NL L F+ YG ++ V D E+ S+G G+V + A+ +
Sbjct: 94 EVYVCNLPRRCDATYLLDMFRPYGTILSVEVCRDAETNESKGCGYVTLGSIYSARNAVAA 153
Query: 105 LNGVELEGRAMRVSLA 120
L+G ++ GR +RV +
Sbjct: 154 LDGSDVGGRELRVRFS 169
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G LS+ ESL AF +YG + V+ D E+GRSRG+GFV Y + + ALE
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEG 65
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
+NG L+GRA+RV A +G RS
Sbjct: 66 MNGKTLDGRAIRVDEAGKGGRS 87
>gi|4544401|gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
YA+ +++ FVG L+W+ +S+ + F E+G V ++++ D E+GRS+G+ FV + + M
Sbjct: 39 YADNEYRCFVGGLAWATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDEDSM 98
Query: 99 ETALESLNGVELEGRAMRVSLAQGRRS 125
TA++ +NG EL+GR + AQ R S
Sbjct: 99 RTAIDRMNGQELDGRNI---TAQARGS 122
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFV LSWS+ SL AF +G V R++YD +SGRSRG+GFV ++ + + A ++
Sbjct: 45 KLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKDA 104
Query: 105 LNGVELEGRAMRVSLA 120
++G + GR +R+S A
Sbjct: 105 MDGKAVLGRPLRISFA 120
>gi|383142223|gb|AFG52471.1| Pinus taeda anonymous locus CL931Contig1_02 genomic sequence
Length = 85
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL WSV + L + F++ G+V V+YD ++GRSRG+ FV +T+ + ++A+
Sbjct: 16 DIKVFVGNLPWSVDSAELAELFKDAGDVTMVEVIYDRQTGRSRGFAFVTMATQEDADSAV 75
Query: 103 ESLNGVELEG 112
E LNG E +G
Sbjct: 76 EKLNGYEYQG 85
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPK---------LPLYAETD-FKLFVGNLSWSVTTE 58
+ + ++GR+ +G+ ++VN++ P + + A D F +FVG+LS +TTE
Sbjct: 101 SALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTE 160
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+ AF +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R +
Sbjct: 161 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 220
Query: 119 LA 120
A
Sbjct: 221 WA 222
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 199 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYC 258
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 259 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 312
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 313 TIEGHVVK 320
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 36 LPLYAETDFKLF--VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYS 93
L LY E F ++ VGNLS VT + Q F + G +++ D + + Y FV +
Sbjct: 37 LELYKELLFVVYPYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFY 94
Query: 94 TKAEMETALESLNGVELEGRAMRVSLA 120
+AL ++NG ++ G+ ++V+ A
Sbjct: 95 EHRHAASALAAMNGRKIMGKEVKVNWA 121
>gi|383142219|gb|AFG52469.1| Pinus taeda anonymous locus CL931Contig1_02 genomic sequence
Length = 85
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
D K+FVGNL WSV + L + F++ G+V V+YD ++GRSRG+ FV +T+ + ++A+
Sbjct: 16 DIKVFVGNLPWSVDSAELAELFKDPGDVTMVEVIYDRQTGRSRGFAFVTMATQEDADSAV 75
Query: 103 ESLNGVELEG 112
E LNG E +G
Sbjct: 76 EKLNGYEYQG 85
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
F +FVG+LS V E L QAF +G V ARV++D ++GRSRGYGFV + +A+ + AL
Sbjct: 165 FHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADADRALS 224
Query: 104 SLNGVELEGRAMRVSLAQGR 123
S++G L RA+R + A +
Sbjct: 225 SMDGEWLGSRAIRCNWANQK 244
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ + L FQ +G V R D RG+ F+ T A+ LN
Sbjct: 294 YVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAFIKMDTHENAAMAICQLN 347
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + R
Sbjct: 348 GYNVNGRPLKCSWGKDR 364
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYD----GESGRSRG--YGFVCYSTKAEME 99
L+VG L VT + L Q F+ G+V +++ D S S+G YGFV Y E
Sbjct: 85 LYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGAAE 144
Query: 100 TALESLNG 107
+ +LNG
Sbjct: 145 RGMATLNG 152
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG LSW++ L + F+ G V+ ARV+ + +G+SRGYG+V + TK+ E ALE +
Sbjct: 198 LFVGRLSWNIDDSWLKREFEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKALEEM 257
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + + ++ G+
Sbjct: 258 QGKEIDGRPINLDMSTGK 275
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 10 VIENLDGREYLGRILRVNFSD-KPKP------KLPLYAETDFKL----FVGNLSWSVTTE 58
+E + G+E GR + ++ S KP + Y ++ L FVGNLS++ +
Sbjct: 253 ALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRAKQYGDSQSALSDTLFVGNLSFNANRD 312
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+L F EYGNV+ RV ++ + +G+G+V +S+ E + ALE+LNG +EGR R+
Sbjct: 313 NLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIEGRPCRLD 372
Query: 119 LAQGR 123
+ R
Sbjct: 373 FSTPR 377
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + +FVG+LS V E L +AF +G++
Sbjct: 76 LQTLNGRKIFDTEIRVNWAYQGNQNKE-DTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSL 134
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 135 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 187
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQT 78
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG ++
Sbjct: 79 LNGRKIFDTEIRVNWAYQGNQN 100
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 53/76 (69%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W +L + F+E+G V A V+ D ++GRSRG+GFV Y+ +A+ + A+++
Sbjct: 3 KLFIGGLAWHTEDATLKKKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEADAQKAMDA 62
Query: 105 LNGVELEGRAMRVSLA 120
+N VE +GR +RV A
Sbjct: 63 MNNVEFDGRQIRVDKA 78
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNLS+ T + L F ++GNV +++++D ESG S+G+GF+ ST E A+
Sbjct: 4 KLYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAITG 63
Query: 105 LNGVELEGRAMRVSLA 120
NG E EGR +RV+ A
Sbjct: 64 TNGHEFEGRQLRVNEA 79
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 56/80 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V L+W V SL AF+E+G+V+ +V+ + ++GRS+G+GFV + + E + ALES
Sbjct: 21 KLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEAKEALES 80
Query: 105 LNGVELEGRAMRVSLAQGRR 124
++G + GR++RV A+ ++
Sbjct: 81 MDGKDFAGRSIRVDYAKTQK 100
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL +SVT SL F E+GNV A+V+ D E+GRS+G+GFV ++ + A+
Sbjct: 4 KIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAITG 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G+ ++GR++ V+LA+ R
Sbjct: 64 LHGMSVDGRSIVVNLARPR 82
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V E L +AF +G +
Sbjct: 75 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTL 133
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG+++
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQN 99
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT E L Q F+EYG V + D E+GR RG+ FV +AE + A+E+L
Sbjct: 3 IYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIEAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E GR MRV+ A+ R
Sbjct: 63 DGAEWMGRDMRVNKARPR 80
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNL W V +L + FQ V GARV+ D +SGRSRG+G+V + T E A
Sbjct: 290 LFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEKAYNDK 349
Query: 106 NGVELEGRAMRVSLA 120
NG L+GR MR+ A
Sbjct: 350 NGAFLQGREMRLDFA 364
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNFSDKPKP-KLP--------------LYAETDFKLF 47
T E + +G GR +R++F+ KP P + E+D LF
Sbjct: 338 TPEAAEKAYNDKNGAFLQGREMRLDFAAKPSADSTPNARAAERARKHGDVISPESD-TLF 396
Query: 48 VGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNG 107
VGNLS+S ES++ F + V R+ D ESGR +G+ +V +S+ + + A E+LNG
Sbjct: 397 VGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAFEALNG 456
Query: 108 VELEGRAMRVSLAQGR 123
+L+GR +R+ A+ R
Sbjct: 457 SDLDGRPVRLDFAKPR 472
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W T E+L F++YG + A V+ D ++ RSRG+GFV +++ E +TA+ +
Sbjct: 3 KLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRVIRVDKASDR 81
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 56/79 (70%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
K++VGNL +SVT +L F E+GNV A+V+ D E+GRS+G+GFV ++ + A+
Sbjct: 4 KIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAITG 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G+ ++GR++ V+LA+ R
Sbjct: 64 LHGMSVDGRSIVVNLARPR 82
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T ++L Q F+ YG V A V+ D ++ RSRG+GFV +S+ E + A+++
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRTIRVDKASER 81
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 9/122 (7%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETD----FKLFVGNLSWSVTTE 58
T++ ++ L GR+ ++VN++ + + A+ D F +F G+LS VT +
Sbjct: 63 TMQGAEQALQTLAGRKLFDTEMKVNWAYQNQT-----AKEDVTNHFHVFCGDLSPEVTDD 117
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
L + F +G++ ARV++D SG+SRGYGF+ + +A+ E A+ ++NG L RA+RV+
Sbjct: 118 ILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVN 177
Query: 119 LA 120
A
Sbjct: 178 WA 179
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNL T L FQ YG +V R+ D RG+ FV T A+ L
Sbjct: 226 VYVGNLVPYCTQADLIPLFQGYGYIVEIRMQAD------RGFAFVKLDTHEHAAMAIAYL 279
Query: 106 NGVELEGRAMRVSLAQGR 123
G +GR+++ S + R
Sbjct: 280 TGQMCQGRSLKCSWGKDR 297
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG--YGFVCYSTKAEMETAL 102
L++GN+S VT L + F G V +++ D + + G YGFV + T E AL
Sbjct: 13 HLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPD-RTFQHGGLNYGFVEFYTMQGAEQAL 71
Query: 103 ESLNGVELEGRAMRVSLA 120
++L G +L M+V+ A
Sbjct: 72 QTLAGRKLFDTEMKVNWA 89
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T ++L + F ++G + A V+ D ++ RSRG+GFV +S++AE + AL +
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 105 LNGVELEGRAMRVSLA 120
+N E +GR +RV A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 39 YAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEM 98
Y + +FVGN+ + T E L F E GNV+ R+++D ESG+ +GYGF Y K
Sbjct: 11 YERSIRSVFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETA 70
Query: 99 ETALESLNGVELEGRAMRVSLAQGRRS 125
+++ +LNG EL GR +RV A R+
Sbjct: 71 LSSMRNLNGRELHGRPLRVDHATSERN 97
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + +FVG+LS V E L +AF +G++
Sbjct: 105 LQTLNGRKIFDTEIRVNWAYQGTQNKE-DTSNHYHVFVGDLSPEVNDEVLAKAFAAFGSL 163
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 164 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 216
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D + YGFV Y ETAL++
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQT 107
Query: 105 LNGVELEGRAMRVSLA 120
LNG ++ +RV+ A
Sbjct: 108 LNGRKIFDTEIRVNWA 123
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W T E+L F++YG + A V+ D ++ RSRG+GFV +++ E +TA+ +
Sbjct: 3 KLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRVIRVDKASDR 81
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++ R L R ++VN++ +P + + F +F+G+LS V ++L AF +G V A
Sbjct: 1 MNKRVLLDREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDA 60
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+V+ D + +S+GYGFV Y + E E A+E +NG L R +R + A
Sbjct: 61 KVIRDSTTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWA 107
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ LG+ ++VN++ P + L F +FVG+LS +TTE + A
Sbjct: 67 MNGRKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDLSPEITTEDIKSA 126
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 127 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 183
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 160 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYC 219
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV + +GY FV +ST A+ S+NG
Sbjct: 220 GGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGT 273
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 274 TIEGHVVK 281
>gi|156367097|ref|XP_001627256.1| predicted protein [Nematostella vectensis]
gi|156214160|gb|EDO35156.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
+++ ++GNLS+SV ++L + F +VV +V+ D E+GR RG+GFV + +K EME A+
Sbjct: 4 EYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
+ +G + +GR M+V+ AQ R
Sbjct: 63 DEFDGQDFDGRPMKVNQAQPR 83
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%)
Query: 40 AETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEME 99
++ +++ FVG L+W+ SL AF YG V+ ++++ D E+ RSRG+GFV +S
Sbjct: 13 SDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXR 72
Query: 100 TALESLNGVELEGRAMRVSLAQ 121
+A+E +NG EL+GR + V+ AQ
Sbjct: 73 SAIEGMNGKELDGRNITVNEAQ 94
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V E L +AF +G +
Sbjct: 72 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTTGHYHVFVGDLSPEVNDEVLAKAFAAFGTL 130
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 131 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 183
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 34 PKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCY 92
P P A L+VGNLS VT LT+ F G V +++ D YGFV Y
Sbjct: 3 PLSPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEY 62
Query: 93 STKAEMETALESLNGVELEGRAMRVSLA-QGRRS 125
ETAL++LNG ++ +RV+ A QG+++
Sbjct: 63 MDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQN 96
>gi|384246748|gb|EIE20237.1| hypothetical protein COCSUDRAFT_57959 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNV-VGARVLYDGESGRSRGYGFVCYSTKAEME 99
++DFK+FVG +SW T + L F +Y V ARV+ D + RSRG+GFV + TK +ME
Sbjct: 17 QSDFKVFVGGISWHTTDQELADTFSKYAQAPVDARVMLDRITNRSRGFGFVTFDTKEDME 76
Query: 100 TALESLNGVELEGRAMRVSLA 120
+ L+ EL+GR + V+ A
Sbjct: 77 ECIAKLHATELDGRKISVTRA 97
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T ++L F+++G + A V+ D ++ RSRG+GFV +ST AE + A+E
Sbjct: 3 KLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEG 62
Query: 105 LNGVELEGRAMRVSLA 120
+N + +GR +RV A
Sbjct: 63 MNNQDFDGRVIRVDRA 78
>gi|428304645|ref|YP_007141470.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246180|gb|AFZ11960.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 103
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT + L+QAF EYG V ++ D E+GR RG+GFV S+ AE A+++L
Sbjct: 3 VYVGNLSFDVTQDDLSQAFAEYGTVKSVQLPTDRETGRMRGFGFVEMSSDAEETAAIDAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E GR ++V+ A+ R
Sbjct: 63 DGAEWMGRDLKVNKAKPR 80
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 61/100 (61%)
Query: 24 LRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR 83
+RVN++ + + F +FVG+LS V + L QAF +G V ARV++D ++GR
Sbjct: 122 IRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKTGR 181
Query: 84 SRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+RGYGFV + +++ E AL S++G L RA+R + A +
Sbjct: 182 TRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQK 221
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL+ T + FQ +G VV +R D RG+ F+ T A+ +N
Sbjct: 271 YVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKMDTHENAAMAICQMN 324
Query: 107 GVELEGRAMRVSLAQGR 123
G + GR ++ S + +
Sbjct: 325 GYNVNGRPLKCSWGKDK 341
>gi|440789937|gb|ELR11228.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 506
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 42 TDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETA 101
D KLF+G LSWS T+E+L AF++YG V A+V+ + +GRSRG+G V Y +++ A
Sbjct: 6 NDRKLFIGGLSWSTTSETLRAAFEKYGKVEEAKVISEPGTGRSRGFGAVMYYNESDALAA 65
Query: 102 LESLNGVELEGRAMRV 117
+ ++GVELEGR + V
Sbjct: 66 YKGMHGVELEGRFLYV 81
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 30 DKPKPKLPLYAETDFK---LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
D+ + P A+TD + +FVG LSWS+ E L Q F+ G VV ARV+Y+ + RSRG
Sbjct: 159 DEEEESSPKKAKTDGEPATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRG 218
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
YG+V + K+ E A++ ++G E++GR + V ++ +
Sbjct: 219 YGYVDFEDKSYAEKAVKEMHGKEIDGRPINVDMSTSK 255
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 11 IENLDGREYLGRILRVNFS----------DKPKPKLPLYAETDFKLFVGNLSWSVTTESL 60
++ + G+E GR + V+ S D+ K + +E LF+GNLS++ +++
Sbjct: 234 VKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKRFGDIPSEPSDTLFLGNLSFNADRDNI 293
Query: 61 TQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRV 117
+ F ++G ++ R+ E+ + +G+G+V Y++ + + ALE+L G ++ R +R+
Sbjct: 294 YEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKALEALQGEYIDNRPVRL 350
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETD----FKLFVGNLSWSVTTESLTQAFQE 66
++ L+GR+ +RVN++ + A+ D F +FVG+LS V L +AF
Sbjct: 72 LQTLNGRKIFDTEIRVNWAYQGST-----AKEDTSGHFHVFVGDLSPEVNDAVLAKAFSA 126
Query: 67 YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
+G + ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 127 FGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 183
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 105 LNGVELEGRAMRVSLA 120
LNG ++ +RV+ A
Sbjct: 75 LNGRKIFDTEIRVNWA 90
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPK---------------LPLYAETDFKLFV 48
D I+ + G+ GR +R N++ + P PK + + ++ ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY F+ +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQILEIRVFPD------KGYSFIRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETD--FKLFVGNLSWSVTTESLTQAFQEYG 68
++ L GR+ +RVN++ + + + + F +FVG+LS V + L +AF +G
Sbjct: 167 LQTLGGRKIFDNEIRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDVLAKAFAAFG 226
Query: 69 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++ ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 227 SLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 281
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGR-SRGYGFVCYSTKAEMETALES 104
L+VGNLS VT L + F G+V G +++ D YGFV Y ETAL++
Sbjct: 110 LYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 169
Query: 105 LNGVELEGRAMRVSLA 120
L G ++ +RV+ A
Sbjct: 170 LGGRKIFDNEIRVNWA 185
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKA 96
P Y T ++ GNL T L FQ +G +V R+ D RG+ FV T
Sbjct: 330 PAYNST---VYTGNLVPYCTQADLIPLFQGFGYIVEIRMQAD------RGFAFVKLDTHE 380
Query: 97 EMETALESLNGVELEGRAMRVSLAQGRRS 125
A+ +L G + GR ++ S + R S
Sbjct: 381 NAAMAIVNLTGTPVHGRPLKCSWGKDRAS 409
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|414153680|ref|ZP_11410002.1| RNP-1 like RNA-binding protein [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411454701|emb|CCO07906.1| RNP-1 like RNA-binding protein [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 84
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL W+ E L +AF +YG V +RV+ D E+GRSRG+GFV + A++E + +L
Sbjct: 4 LYVGNLPWATKAEDLQEAFSQYGEVFSSRVITDRETGRSRGFGFVEVN-DADVEKMVAAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
NG EL GR + V+ A+ R
Sbjct: 63 NGTELGGRIITVNEAKAR 80
>gi|357113599|ref|XP_003558590.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like
[Brachypodium distachyon]
Length = 102
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 43 DFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETAL 102
++++ VGNL+W SL AF ++G +GA ++YD E RSRG+GFV ++ M A+
Sbjct: 17 EYRVHVGNLAWGTDERSLKDAFADHG-PIGAEIVYDQEMDRSRGFGFVNFNDHKSMSDAI 75
Query: 103 ESLNGVELEGRAMRVSLAQGR 123
+ +NG EL+GR++ V+ A R
Sbjct: 76 QRMNGQELDGRSITVNQANHR 96
>gi|449546812|gb|EMD37781.1| hypothetical protein CERSUDRAFT_73600 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 26/105 (24%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLY--------------------------D 78
K++VGNLSW+ T ++L AF +GNV+ R+ Y D
Sbjct: 4 KVYVGNLSWNTTDDTLRSAFAPFGNVLDVRLAYLRTRGCAFQYEQLRVPKSQGPSIVMRD 63
Query: 79 GESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
++GRSRG+GFV YS+ E ++A+ +LN EL+GR ++V+LA R
Sbjct: 64 RDTGRSRGFGFVTYSSSMEADSAISNLNEQELDGRRIKVNLANPR 108
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA------ETDFKLFVGNLSWS 54
M++ E+ A ++ D E GRILRV + + K P E ++ NL+W
Sbjct: 133 MASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARHVIYASNLAWK 192
Query: 55 VTTESLTQAFQE-YGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGR 113
V + L + F E + + AR+++D SG + GYGF+ Y TK E E A+ +L+G EL GR
Sbjct: 193 VRSTHLREFFTENFKAPLSARIVFDTPSGWATGYGFISYLTKEEAEAAISALDGKELMGR 252
Query: 114 AMRVSLAQGR 123
++ + +++ +
Sbjct: 253 SLFLKISEKK 262
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+V L WS++ + F + G V ++ G+ GR +GY FV ++ E + A++
Sbjct: 87 KLYVFTLPWSMSAADIKDLFGQCGTVTDVEIIR-GKDGRGKGYAFVTMASGEEAQAAVDK 145
Query: 105 LNGVELEGRAMRVSLAQ 121
+ +EL GR +RV LA+
Sbjct: 146 FDTLELSGRILRVELAK 162
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W T ++L + F +YG + A V+ D ++ RSRG+GFV +++ AE + A+ +
Sbjct: 3 KLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMNA 62
Query: 105 LNGVELEGRAMRVSLAQGRR 124
+N E +GR +RV A R
Sbjct: 63 MNNQEFDGRVIRVDKASESR 82
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG+L+W+ T +SL F + G V ARV+ D +GRS+G+GFV S+ E + A+
Sbjct: 4 KLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAVAE 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG EL+GRA+ V+ A+
Sbjct: 64 LNGKELDGRAIVVNEAR 80
>gi|309790385|ref|ZP_07684950.1| RNP-1 like RNA-binding protein [Oscillochloris trichoides DG-6]
gi|308227577|gb|EFO81240.1| RNP-1 like RNA-binding protein [Oscillochloris trichoides DG6]
Length = 99
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGNL+WS+ + L F+ +GNV ARV++D ++GRSRG+GFV ++ + +
Sbjct: 4 KLFVGNLAWSIDDQKLESFFRAHGNVQSARVIHDRDTGRSRGFGFVEMDVN-DVSAVIRA 62
Query: 105 LNGVELEGRAMRVSLAQ 121
+G E++GR +RV+ A+
Sbjct: 63 TDGAEVDGRPIRVNEAE 79
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTE 58
A + ++GR+ +G+ ++VN++ P + L ++ F +FVG+LS +TT+
Sbjct: 61 ASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTD 120
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+ AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTN 180
Query: 119 LA 120
A
Sbjct: 181 WA 182
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +L ++
Sbjct: 9 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|298528813|ref|ZP_07016217.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512465|gb|EFI36367.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLSW+ T L +F E+G V A+++ D E+GRSRG+GFV A + A+E L
Sbjct: 4 LYVGNLSWNTTETQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEMENGA--DEAVEKL 61
Query: 106 NGVELEGRAMRVSLAQGRR 124
NG + +GR ++V++A+ +R
Sbjct: 62 NGKDFDGRTIKVNVAKPKR 80
>gi|338812035|ref|ZP_08624234.1| hypothetical protein ALO_08073 [Acetonema longum DSM 6540]
gi|337276004|gb|EGO64442.1| hypothetical protein ALO_08073 [Acetonema longum DSM 6540]
Length = 83
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL WS T +LT+AF+E+G V +R++ D E+GRSRG+GFV A++E + ++
Sbjct: 5 LYVGNLPWSTTDTALTEAFREHGTVYSSRIITDKETGRSRGFGFVEVE-DADVEKMITAM 63
Query: 106 NGVELEGRAMRVSLAQGRRS 125
NG + GR + V+ A+ R++
Sbjct: 64 NGTDFGGRQIVVNEAKPRQN 83
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L F+ +G + G R++ D +SGRSRG+G+V ++ + A E+
Sbjct: 267 LFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFEAK 326
Query: 106 NGVELEGRAMRVSLAQGRR 124
G EL+GR + + A R+
Sbjct: 327 KGAELDGRPLNLDYANARQ 345
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 1 MSTVEDCNAVIENLDGREYLGRILRVNFS----------DKPKPKLPLYA-----ETDFK 45
+ ED E G E GR L ++++ D+ + + + E+D
Sbjct: 313 FTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNAGGAKDRSQARAKSFGDQTSPESDT- 371
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LF+GN+S+ ++ + F YG + G R+ D ESGR +G+G++ +S+ E +AL L
Sbjct: 372 LFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSVDEARSALNEL 431
Query: 106 NGVELEGRAMRVSLAQGRR 124
G EL GRAMR+ + R+
Sbjct: 432 QGSELAGRAMRLDFSTPRQ 450
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYA-ETDFKLFVGNLSWSVTTESLTQA 63
+ + + L+GR +++N++ + L E F +FVG+LS V E+L ++
Sbjct: 149 QSADMALHTLNGRIINNSEIKINWAYQSSTISSLNPDEPTFNIFVGDLSPEVDDETLNKS 208
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
F ++ ++ A V++D ++ RSRGYGFV + +A+ E AL+++NG + GRA+R + A +
Sbjct: 209 FSKFPSLKQAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRAIRCNWASHK 268
Query: 124 R 124
+
Sbjct: 269 Q 269
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 2 STVEDCNAVIENLDGREYLGRILRVNFSDKP------KPKLPLYAET----DFKLFVGNL 51
ST E IE L+G+E GR + V+ S+ P + + + +T LFVGNL
Sbjct: 382 STSEAVEKAIE-LNGKEIDGRAVNVDKSNPPNKDASREKRAKTFGDTTSPPSATLFVGNL 440
Query: 52 SWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELE 111
S+ + ++L +AF E+G V R+ D ESGR +G+G+V +S + A ++ GVEL+
Sbjct: 441 SFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVELD 500
Query: 112 GRAMRVSLAQGR 123
GR++R+ +Q R
Sbjct: 501 GRSVRLDFSQPR 512
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSW+V + L + F E G VV A V D +GRSRG+G+V +ST +E A+E L
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAIE-L 393
Query: 106 NGVELEGRAMRV 117
NG E++GRA+ V
Sbjct: 394 NGKEIDGRAVNV 405
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V E L +AF +G +
Sbjct: 70 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTM 128
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 129 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 181
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTKAEMETALES 104
L+VGNLS VT LT+ F G V +++ D YGFV Y ETAL++
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 72
Query: 105 LNGVELEGRAMRVSLA-QGRRS 125
LNG ++ +RV+ A QG+++
Sbjct: 73 LNGRKIFDTEIRVNWAYQGQQN 94
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT E L++ F EYG+V ++ D E+GRSRG+GFV ++ E +A+++L
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E GRAM+V+ A+ R
Sbjct: 63 DGAEWMGRAMKVNKARPR 80
>gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]
Length = 290
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%)
Query: 31 KPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFV 90
KP ++ + ++ V NL WS T++ L Q FQ+ G VV A+ ++GRS+G+G V
Sbjct: 198 KPPREIRPENSSGLQIVVRNLPWSTTSDDLRQVFQQVGTVVDAKSTCHDDTGRSKGWGTV 257
Query: 91 CYSTKAEMETALESLNGVELEGRAMRVSL 119
+ T+ + + A+ NGVELEGR M++ +
Sbjct: 258 LFETQEQAQAAIAGFNGVELEGRPMQIKI 286
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGN+ WS T E L F + N+ + G RSRGY V +S ++ ++A+++
Sbjct: 10 RLYVGNIPWSTTVEELQGLFTDAENIE----IPTGRQNRSRGYALVSFSDESAAQSAMQA 65
Query: 105 LNGVELEGRAMRV 117
+NG L R + V
Sbjct: 66 MNGHALGDRNISV 78
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 8 NAVIENLDGREYLGRILRVNFSDKPKPKLPLY------------------AETDFKLFVG 49
+ ++ ++G R + V +D P PK P AE + +VG
Sbjct: 60 QSAMQAMNGHALGDRNISVR-ADNPLPKAPKSSSRGSGGAPVQRPTNLPEAEEGCRCYVG 118
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NL+W ++L + Q G+ V + GRS+G+ + +++K + +++L+ E
Sbjct: 119 NLAWETDEQALIEHCQTIGHPVLRCEVARQSGGRSKGWALIDFASKEAADAGVKALHDTE 178
Query: 110 LEGRAMRV 117
R++ V
Sbjct: 179 CRARSIIV 186
>gi|291566709|dbj|BAI88981.1| RNA-binding protein [Arthrospira platensis NIES-39]
Length = 93
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT + L+ AF EYG V + + D E+GRSRG+GFV S++ E + A+ +L
Sbjct: 3 IYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAINAL 62
Query: 106 NGVELEGRAMRVSLAQGR 123
+G E +GR+++V+ A+ R
Sbjct: 63 DGAEWKGRSLKVNKARPR 80
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTE 58
A + ++GR+ +G+ ++VN++ P + L ++ F +FVG+LS +TT+
Sbjct: 61 ASLAAMNGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTD 120
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+ AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTN 180
Query: 119 LA 120
A
Sbjct: 181 WA 182
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLTYEEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +L ++
Sbjct: 9 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVG L+W+V + L + FQ V+ ARV+ + E+GRSRGYG+V + +K + + ALE
Sbjct: 262 LFVGRLAWAVDDQRLLEEFQSLDGVLSARVMTERETGRSRGYGYVDFESKEQAQKALEQF 321
Query: 106 NGVELEGRAMRVSLA 120
G E+EGR + + ++
Sbjct: 322 QGREIEGRPINLDMS 336
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Query: 5 EDCNAVIENLDGREYLGRILRVNFSDKPKPKLP-----------LYAETDFK----LFVG 49
E +E GRE GR + ++ S KP+ P Y +T + LFVG
Sbjct: 312 EQAQKALEQFQGREIEGRPINLDMSTS-KPQTPSQNQKFQDRAKKYGDTPSQPSDTLFVG 370
Query: 50 NLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVE 109
NLS+ ++L + F+++G V+G R+ ES + +G+G+V + + E + ALE+LNG
Sbjct: 371 NLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGFGYVQFGSVDEAKAALEALNGEY 430
Query: 110 LEGRAMRVSLAQGR 123
+ GR +R+ + R
Sbjct: 431 IAGRPVRLDFSAPR 444
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY F+ +S+ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++ R GR ++VN++ P + +FVG+LS + T L +AF+ +G +
Sbjct: 56 MNKRTCFGREMKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDC 115
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+++ D ++ +S+GYGFV Y + E E A+ S+NG + RA+R + A
Sbjct: 116 KIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWA 162
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 10 VIENLDGREYLGRILRVNFSDKPKPKLPLYAETD---------FK--------LFVGNLS 52
I +++G+ R +R N++ + KP P ET+ FK ++ G +
Sbjct: 143 AINSMNGQWIGSRAIRTNWAIR-KPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGIL 201
Query: 53 WSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEG 112
+T + + AF E+G + RV D +GY F+ Y+TK A+ ++ E+ G
Sbjct: 202 SGLTEDLVRSAFGEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMHQTEVGG 255
Query: 113 RAMRVSLAQ 121
++ S +
Sbjct: 256 HTVKCSWGK 264
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 47 FVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLN 106
+VGNL +VT + L F G G ++++ E+G + Y FV +S + AL ++N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIH--ETG-NEPYAFVEFSEHSSAALALGTMN 57
Query: 107 GVELEGRAMRVSLA 120
GR M+V+ A
Sbjct: 58 KRTCFGREMKVNWA 71
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V + L +AF +G +
Sbjct: 45 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTL 103
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 104 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 156
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLF+G L+W ++L F+E+G V A V+ D ++GRSRG+GFV Y+ + E + A+++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 105 LNGVELEGRAMRVSLAQGR 123
+N E +GR +RV A R
Sbjct: 63 MNNEEFDGRRIRVDKASDR 81
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 37 PLYAETDFK----LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCY 92
P A+TD + LF GNLSW++ +L++AF+ + +VGARV+ D + GRSRG+G+V +
Sbjct: 256 PKKAKTDEQAASTLFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRDGGRSRGFGYVDF 315
Query: 93 STKAEMETALESLNGVELEGRAMRVSLAQGR 123
T A E++ G EL+ R + + A R
Sbjct: 316 ETAEAATKAYEAMQGSELDSRPLNLDYANSR 346
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 3 TVEDCNAVIENLDGREYLGRILRVNFSD-KPKPKLPLYAETDFK-------------LFV 48
T E E + G E R L +++++ +P P TD LF+
Sbjct: 317 TAEAATKAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKKHGDSVSPESETLFI 376
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
GNL + E++ Q F E V R+ D +SG +G+G+V +++ + + + LNG
Sbjct: 377 GNLPFDTDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFTSVEDAKNVFQQLNGA 436
Query: 109 EL----EGRAMRVSLAQGR 123
L R++R+ A R
Sbjct: 437 PLGNGRTSRSVRLDFASSR 455
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LFVGN+ +S +S+++ F + G +VG R+ D ESGR +G
Sbjct: 385 NFGDQASP------ESD-TLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKG 437
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E A LNG EL GR +R+ + R S
Sbjct: 438 FGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPS 476
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L Q F+ +G + G R++ D +SGRSRG+G+V Y + A+ A +
Sbjct: 288 LFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYNAK 347
Query: 106 NGVELEGRAMRVSLAQGR 123
E++GR + + A GR
Sbjct: 348 KDTEIDGRKINLDYATGR 365
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVG LSWS+ E L + F+ G V+GARV+Y+ + RSRGYG+V + K+ E A++ +
Sbjct: 5 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 64
Query: 106 NGVELEGRAMRVSLAQGR 123
G E++GR + ++ +
Sbjct: 65 QGKEIDGRPINCDMSTSK 82
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 10 VIENLDGREYLGRILRVNFS--------DKPKPKLPLYAETDFKLFVGNLSWSVTTESLT 61
I+ + G+E GR + + S D+ K +E LF+GNLS++ +++
Sbjct: 60 AIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIF 119
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQ 121
+ F ++G VV R+ E+ + +G+G+V +S + + AL++L G ++ R +R+ +
Sbjct: 120 ELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 179
Query: 122 GR 123
R
Sbjct: 180 PR 181
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 16/119 (13%)
Query: 15 DGREYLGRILRVNFSDKPKP-------------KLPLYAETDFKLFVGNLSWSVTTESLT 61
DG E GR +RVN++ + KP K AET L++G+LS+SVT + +
Sbjct: 255 DGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQSPPAET---LWIGSLSFSVTEDQVY 311
Query: 62 QAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
+AF ++G+V R+ D ++G +G+G+V +S+ + AL+++NG E+ GRA+RV A
Sbjct: 312 EAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRVDFA 370
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 41 ETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMET 100
E +FVG LSW+V + L F+ G VV ARV++D +S +SRG+G+V ++
Sbjct: 191 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAK 250
Query: 101 ALESLNGVELEGRAMRVSLAQGRR 124
A+E +G E++GRA+RV+ A R+
Sbjct: 251 AIEK-DGSEIDGRAIRVNYATQRK 273
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LFVGN+ +S +S+++ F + G +VG R+ D ESGR +G
Sbjct: 398 NFGDQTSP------ESDT-LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKG 450
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E A LNG EL GR +R+ + R S
Sbjct: 451 FGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPS 489
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L Q F+ +G + G R++ D +SGRSRG+G+V Y A+ A +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAK 363
Query: 106 NGVELEGRAMRVSLAQGR 123
E++GR + + A GR
Sbjct: 364 KDTEIDGRKINLDYATGR 381
>gi|209528246|ref|ZP_03276711.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376004999|ref|ZP_09782569.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|423065550|ref|ZP_17054340.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|209491318|gb|EDZ91708.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375326593|emb|CCE18322.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|406712993|gb|EKD08168.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 100
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
++VGNLS+ VT E LT F EYG V ++ D E+GR RG+GFV T+AE ++A+++L
Sbjct: 3 IYVGNLSYEVTEEDLTAVFAEYGAVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDAL 62
Query: 106 NGVELEGRAMRVSLAQGRRS 125
+G E GR +RV+ A+ R +
Sbjct: 63 DGAEWCGRDLRVNKAKPREN 82
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V E L +AF +G +
Sbjct: 73 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTTGHYHVFVGDLSPEVNDEILGKAFSAFGTM 131
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 132 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 184
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTK 95
P A L+VGNLS VT LT+ F G V +++ D YGFV Y
Sbjct: 7 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDM 66
Query: 96 AEMETALESLNGVELEGRAMRVSLA-QGRRS 125
ETAL++LNG ++ +RV+ A QG+++
Sbjct: 67 RAAETALQTLNGRKIFDTEIRVNWAYQGQQN 97
>gi|189465920|ref|ZP_03014705.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
gi|189434184|gb|EDV03169.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 44 FKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALE 103
++V NLSW+ ++SL + F +YG V A ++ D E+GRSRG+GFV E + A++
Sbjct: 1 MNIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAID 60
Query: 104 SLNGVELEGRAMRVSLAQGR 123
+LN E EG+ + VS+A+ R
Sbjct: 61 TLNETEFEGKNIAVSVARPR 80
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 57/77 (74%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
+L+VGNL++SV ESL Q F ++G+V A+V+ + ++GRS+G+GFV + +E + A+
Sbjct: 4 RLYVGNLAYSVRDESLHQQFSQFGSVTSAKVMMERDTGRSKGFGFVEMGSDSEAQDAING 63
Query: 105 LNGVELEGRAMRVSLAQ 121
LNG ++GRA+ V++A+
Sbjct: 64 LNGRSVDGRALTVNVAR 80
>gi|313224670|emb|CBY20461.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
+FVGN+ WS T L F +G VV R+L D E+GR RG GF +S +A + A++ L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 106 NGVELEGRAMRVSLAQ 121
NG + GRA+RV A+
Sbjct: 147 NGQDFNGRALRVDHAK 162
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 9 AVIENLDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTE 58
A + ++GR+ +G+ ++VN++ P + L ++ F +FVG+LS +TT+
Sbjct: 61 ASLAAINGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTD 120
Query: 59 SLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVS 118
+ AF +G + ARV+ D +G+S+GYGFV + K + E A+ + G L GR +R +
Sbjct: 121 DIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTN 180
Query: 119 LA 120
A
Sbjct: 181 WA 182
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I + G+ GR +R N++ + P E++ K ++
Sbjct: 159 DAENAIAQMGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +S+ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + +L ++
Sbjct: 9 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 67 NGRKIMGKEVKVNWA 81
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KL+VGNL++SV E L +AF ++G V A+V+ D E+GRS+G+GFV + E + A+
Sbjct: 4 KLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAING 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
LNG + GRA+ V+ A+ R
Sbjct: 64 LNGQAIGGRAIVVNEARPR 82
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 27 NFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRG 86
NF D+ P E+D LFVGN+ +S +S+++ F + G +VG R+ D ESGR +G
Sbjct: 398 NFGDQTSP------ESDT-LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKG 450
Query: 87 YGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 125
+G+V +S+ E A LNG EL GR +R+ + R S
Sbjct: 451 FGYVQFSSVDEARQAFNDLNGAELNGRPVRLDFSTPRPS 489
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
LFVGNLSW+V E L Q F+ +G + G R++ D +SGRSRG+G+V Y A+ A +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAADAAKAYNAK 363
Query: 106 NGVELEGRAMRVSLAQGR 123
E++GR + + A GR
Sbjct: 364 KDTEIDGRKINLDYATGR 381
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVGN+SW T L++ F E G VV A+++ D +GRSRG+GFV +T E A+++
Sbjct: 4 KLFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIKA 63
Query: 105 LNGVELEGRAMRVSLAQGR 123
L+G + GR + V++A+ +
Sbjct: 64 LDGKDFLGRPITVNVARPK 82
>gi|298528161|ref|ZP_07015565.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511813|gb|EFI35715.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNL WS T L F EYG V A+++ D E+GRSRG+GFV A + A+ESL
Sbjct: 4 LYVGNLPWSTTEAQLRDLFAEYGEVSSAKIIEDRETGRSRGFGFVEMENGA--DEAIESL 61
Query: 106 NGVELEGRAMRVSLAQGRR 124
NG + GR ++V++A+ +R
Sbjct: 62 NGTDFGGRNIKVNVAKPKR 80
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGA 73
++GR+ LG+ ++VN++ P + F +FVG+LS +TTE + AF +G + A
Sbjct: 84 MNGRKILGKEVKVNWATTPSSQKK-DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDA 142
Query: 74 RVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
RV+ D + +S+GYGFV + K + E A+ + G L GR +R + A
Sbjct: 143 RVVKDMATSKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 189
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDKPKPKLPLYAETDFK-----------------LFV 48
D I ++ G+ GR +R N++ + P E + K ++
Sbjct: 166 DAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQSTAKNCTVYC 225
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G + +T + + Q F +G ++ RV + +GY F+ +ST A+ S+NG
Sbjct: 226 GGIGSGLTEQLMRQTFGVFGQILEIRVFPE------KGYSFIRFSTHDSAAHAIVSVNGT 279
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 280 TIEGHVVK 287
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 57 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 116
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 117 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 173
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 150 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 209
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 263
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 264 TIEGHVVK 271
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 148
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 45 KLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALES 104
KLFVG L+W T ++L Q F++YG + A V+ D ++ RSRG+GFV +S E + A+ +
Sbjct: 3 KLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMNA 62
Query: 105 LNGVELEGRAMRVSLAQGRRS 125
++ E +GR +RV A R S
Sbjct: 63 MSNQEFDGRVIRVDKASDRAS 83
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 68 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 127
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 128 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 184
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 161 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 220
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 221 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 274
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 275 TIEGHVVK 282
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 46 LFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESL 105
L+VGNLS VT + Q F + G +++ D + + Y FV + AL ++
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 106 NGVELEGRAMRVSLA 120
NG ++ G+ ++V+ A
Sbjct: 69 NGRKIMGKEVKVNWA 83
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 11 IENLDGREYLGRILRVNFSDKPKPKLPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNV 70
++ L+GR+ +RVN++ + + + +FVG+LS V + L +AF +G +
Sbjct: 75 LQTLNGRKIFDTEIRVNWAYQGQQNKE-DTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTL 133
Query: 71 VGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGR 123
ARV++D SG+SRGYGF+ + K + E A+ ++NG L RA+RV+ A +
Sbjct: 134 SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 37 PLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRS-RGYGFVCYSTK 95
P A L+VGNLS VT LT+ F G V +++ D YGFV Y
Sbjct: 9 PAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDM 68
Query: 96 AEMETALESLNGVELEGRAMRVSLA-QGRRS 125
ETAL++LNG ++ +RV+ A QG+++
Sbjct: 69 RSAETALQTLNGRKIFDTEIRVNWAYQGQQN 99
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 14 LDGREYLGRILRVNFSDKPKPKLP----------LYAETDFKLFVGNLSWSVTTESLTQA 63
++GR+ +G+ ++VN++ P + ++ F +FVG+LS +TTE + A
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 64 FQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLA 120
F +G + ARV+ D +G+S+GYGFV + K + E A++ + G L GR +R + A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 6 DCNAVIENLDGREYLGRILRVNFSDK--PKPKLPLYAET---------------DFKLFV 48
D I+ + G+ GR +R N++ + P PK + T + ++
Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC 218
Query: 49 GNLSWSVTTESLTQAFQEYGNVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGV 108
G ++ +T + + Q F +G ++ RV D +GY FV +++ A+ S+NG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGT 272
Query: 109 ELEGRAMR 116
+EG ++
Sbjct: 273 TIEGHVVK 280
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,833,896,086
Number of Sequences: 23463169
Number of extensions: 69835409
Number of successful extensions: 216500
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19108
Number of HSP's successfully gapped in prelim test: 7029
Number of HSP's that attempted gapping in prelim test: 170570
Number of HSP's gapped (non-prelim): 45019
length of query: 125
length of database: 8,064,228,071
effective HSP length: 91
effective length of query: 34
effective length of database: 5,929,079,692
effective search space: 201588709528
effective search space used: 201588709528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)