BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033184
MCSSIPAYGNGKEAGNEAGYIVGMSTCYPKPGFLRITDKETLIVESNYSSSHDHTGVMGL
FYILVADRVPESSSFLDVFNKMYNDINHSAFVWGAFVLAGVAITAAAVGYWRRNKYEDGY
QPIMI

High Scoring Gene Products

Symbol, full name Information P value
AT5G61820 protein from Arabidopsis thaliana 9.5e-25

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033184
        (125 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2159178 - symbol:AT5G61820 "AT5G61820" species...   286  9.5e-25   1


>TAIR|locus:2159178 [details] [associations]
            symbol:AT5G61820 "AT5G61820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005773 "vacuole" evidence=IDA] [GO:0009610
            "response to symbiotic fungus" evidence=RCA] [GO:0009738 "abscisic
            acid mediated signaling pathway" evidence=RCA] [GO:0046482
            "para-aminobenzoic acid metabolic process" evidence=RCA]
            EMBL:CP002688 GO:GO:0005773 EMBL:AY065363 EMBL:AY117191
            IPI:IPI00526914 RefSeq:NP_200990.2 UniGene:At.24832
            UniGene:At.67152 STRING:Q8VZ21 PRIDE:Q8VZ21
            EnsemblPlants:AT5G61820.1 GeneID:836304 KEGG:ath:AT5G61820
            TAIR:At5g61820 InParanoid:Q8VZ21 OMA:VPLHETY PhylomeDB:Q8VZ21
            ProtClustDB:CLSN2690257 Genevestigator:Q8VZ21 InterPro:IPR011692
            Pfam:PF07712 Uniprot:Q8VZ21
        Length = 475

 Score = 286 (105.7 bits), Expect = 9.5e-25, P = 9.5e-25
 Identities = 64/127 (50%), Positives = 85/127 (66%)

Query:     1 MCSSIPAYGNGKEAGNEAGYIVGMSTCYPKPGFLRITDKETLIVESNYSSSHDHTGVMGL 60
             +C+S+P YGNG E GNEAGYIVGMS+CYP    ++++  ETL +ESNYS++  HTGVMGL
Sbjct:   351 ICASMPKYGNGDEPGNEAGYIVGMSSCYPADP-VKVSYGETLTLESNYSNAVGHTGVMGL 409

Query:    61 FYILVADRVPESSSFLDVFNKMYNDI--NHSAF--VWGAFVLAGVAITAAAVGYWRRNKY 116
             FYILVA ++PE  S L   NK + +      +F  ++   V+  V +  AAV Y RR K 
Sbjct:   410 FYILVAQQLPEPDSSLP--NKQHFEAPARSLSFLAIFAVTVVVAVVVLIAAVIY-RRQKR 466

Query:   117 EDGYQPI 123
             EDGYQ +
Sbjct:   467 EDGYQSL 473


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125       125   0.00091  102 3  11 22  0.37    31
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  567 (60 KB)
  Total size of DFA:  135 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.67u 0.10s 11.77t   Elapsed:  00:00:00
  Total cpu time:  11.67u 0.10s 11.77t   Elapsed:  00:00:00
  Start:  Fri May 10 17:28:54 2013   End:  Fri May 10 17:28:54 2013

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