Query 033184
Match_columns 125
No_of_seqs 51 out of 53
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 17:53:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ov0_A Amicyanin; beta-sandwic 88.6 0.48 1.6E-05 31.3 3.8 37 17-55 18-54 (105)
2 1id2_A Amicyanin; beta barrel, 88.2 0.59 2E-05 31.1 4.0 36 18-55 20-55 (106)
3 3c75_A Amicyanin; copper prote 82.3 1.8 6.3E-05 30.1 4.4 35 19-55 47-81 (132)
4 1bxv_A Plastocyanin; copper pr 80.2 1.7 5.9E-05 27.0 3.3 28 27-56 14-41 (91)
5 4hci_A Cupredoxin 1; structura 77.1 2.6 9E-05 27.2 3.6 36 20-55 16-51 (100)
6 3ouv_A Serine/threonine protei 76.7 3.6 0.00012 25.4 4.0 27 17-47 43-69 (71)
7 1pcs_A Plastocyanin; electron 72.5 3.6 0.00012 26.0 3.3 35 20-56 3-41 (98)
8 1iuz_A Plastocyanin; electron 72.4 3.9 0.00013 26.2 3.5 35 20-56 2-40 (98)
9 1kdj_A Plastocyanin; electron 69.4 5.2 0.00018 25.5 3.5 29 27-57 12-40 (102)
10 1plc_A Plastocyanin; electron 69.2 5.2 0.00018 25.4 3.5 28 27-56 12-39 (99)
11 1qhq_A Protein (auracyanin); e 68.6 11 0.00039 25.5 5.4 38 18-55 17-58 (140)
12 1b3i_A PETE protein, protein ( 68.3 7.7 0.00026 24.4 4.2 28 27-56 14-41 (97)
13 2kue_A PKNB, serine/threonine- 66.3 6.5 0.00022 27.0 3.7 27 17-47 111-137 (138)
14 1byp_A Protein (plastocyanin); 65.0 6.5 0.00022 24.9 3.3 28 26-55 11-38 (99)
15 2gim_A Plastocyanin; beta shee 63.4 7.8 0.00027 24.7 3.5 27 27-55 15-41 (106)
16 2plt_A Plastocyanin; electron 61.8 7.8 0.00027 24.4 3.2 29 27-57 13-41 (98)
17 2kuf_A PKNB, serine/threonine- 61.6 8.2 0.00028 26.4 3.5 27 16-46 111-137 (139)
18 3cvb_A Plastocyanin; cupredoxi 53.1 13 0.00045 23.4 3.2 28 26-55 13-40 (105)
19 2ux6_A Pseudoazurin; type-1 co 53.1 13 0.00044 25.6 3.4 29 26-57 15-43 (122)
20 2kud_A PKNB, serine/threonine- 52.5 14 0.00047 25.3 3.5 25 19-47 114-138 (140)
21 2ks1_B Epidermal growth factor 52.4 16 0.00055 22.4 3.4 7 107-113 31-37 (44)
22 2aan_A Auracyanin A; cupredoxi 51.9 21 0.00073 24.1 4.3 37 20-56 19-60 (139)
23 3ef4_A Pseudoazurin, blue copp 44.3 16 0.00053 25.8 2.7 28 28-58 18-45 (124)
24 2l2t_A Receptor tyrosine-prote 43.0 19 0.00066 22.1 2.7 7 107-113 30-36 (44)
25 2l9u_A Receptor tyrosine-prote 41.2 17 0.00059 22.3 2.2 23 92-114 7-33 (40)
26 2k1k_A Ephrin type-A receptor 39.4 24 0.00082 20.8 2.6 17 97-113 20-36 (38)
27 1nwp_A Azurin; electron transp 36.8 40 0.0014 23.6 3.9 31 22-52 7-39 (128)
28 2iaa_C Azurin; quinoprotein, t 34.8 54 0.0019 22.9 4.3 32 22-53 6-39 (128)
29 1eys_H Photosynthetic reaction 32.3 32 0.0011 27.8 3.1 32 90-121 8-40 (259)
30 2ccw_A Azurin II, AZN-2; elect 31.7 65 0.0022 22.5 4.3 31 22-52 7-39 (129)
31 1iby_A Nitrosocyanin; RED copp 30.3 57 0.0019 21.0 3.6 26 30-55 36-61 (112)
32 3tu6_A Pseudoazurin (blue copp 29.3 34 0.0012 23.9 2.5 28 28-58 19-46 (127)
33 1rzh_H Reaction center protein 29.2 39 0.0013 27.5 3.1 32 90-121 9-41 (260)
34 2kui_A PKNB, serine/threonine- 29.0 56 0.0019 24.9 3.9 27 17-47 179-205 (275)
35 2egc_A SH3 and PX domain-conta 28.7 56 0.0019 20.0 3.2 36 14-49 6-41 (75)
36 3erx_A Pseudoazurin; copper pr 28.2 53 0.0018 22.7 3.3 28 28-58 17-44 (123)
37 2wjn_H Reaction center protein 26.8 54 0.0018 26.6 3.5 32 90-121 9-42 (258)
38 3ay2_A Lipid modified azurin p 25.3 73 0.0025 23.5 3.8 32 21-52 46-79 (167)
39 3fsa_A Azurin; copper, cupredo 25.1 75 0.0026 22.7 3.7 26 27-52 13-39 (125)
40 3ty1_A Hypothetical aldose 1-e 24.7 80 0.0028 25.6 4.2 33 17-49 308-350 (384)
41 1cuo_A Protein (azurin ISO-2); 24.4 84 0.0029 21.8 3.8 25 28-52 14-39 (129)
42 4h4g_A (3R)-hydroxymyristoyl-[ 23.6 78 0.0027 22.6 3.6 34 14-50 92-125 (160)
43 1paz_A Pseudoazurin precursor; 21.7 60 0.002 22.3 2.5 27 28-57 17-43 (123)
No 1
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=88.60 E-value=0.48 Score=31.30 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=29.9
Q ss_pred CcccEEEeeeeecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 17 EAGYIVGMSTCYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 17 E~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
.+-|.|-|..|...|..++|..|+++++. |-+. ..|+
T Consensus 18 a~~~~V~~~~~~F~P~~i~v~~Gd~V~~~-N~d~-~~H~ 54 (105)
T 2ov0_A 18 DGAIVVDIAKMKYETPELHVKVGDTVTWI-NREA-MPHN 54 (105)
T ss_dssp TTCEEEEEETTEESSSEEEECTTCEEEEE-ECSS-SCBC
T ss_pred CcCEEEEEeecEEcCCEEEECCCCEEEEE-ECCC-CCEE
Confidence 44589999999999999999999999996 3332 3565
No 2
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=88.22 E-value=0.59 Score=31.11 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=29.9
Q ss_pred cccEEEeeeeecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 18 AGYIVGMSTCYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 18 ~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
+-+.|.|..+...|..++|..|+++++. |-+. ..|+
T Consensus 20 ~~~~V~~~~~~F~P~~i~V~~G~tV~~~-N~d~-~~H~ 55 (106)
T 1id2_A 20 DAVVVGIEKMKYLTPEVTIKAGETVYWV-NGEV-MPHN 55 (106)
T ss_dssp TCEEEEEETTEESSSEEEECTTCEEEEE-ECSS-SCBC
T ss_pred ccEEEEEEecEEeCCEEEECCCCEEEEE-ECCC-CcEE
Confidence 4588999999999999999999999987 4433 3675
No 3
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=82.30 E-value=1.8 Score=30.06 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=29.1
Q ss_pred ccEEEeeeeecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 19 GYIVGMSTCYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 19 GYvVGMStCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
-+.|-|..+...|..++|..||++++. |-+. ..|+
T Consensus 47 ~~~V~~~~~~F~P~~i~V~~GdtV~~~-N~d~-~~H~ 81 (132)
T 3c75_A 47 AVVVGIEKMKYLTPEVTIKAGETVYWV-NGEV-MPHN 81 (132)
T ss_dssp SEEEEEETTEESSSEEEECTTCEEEEE-ECSS-SCBC
T ss_pred cEEEEEeeeEEeCCEEEECCCCEEEEE-ECCC-CceE
Confidence 399999999999999999999999987 3332 3575
No 4
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=80.24 E-value=1.7 Score=26.95 Aligned_cols=28 Identities=14% Similarity=0.063 Sum_probs=21.3
Q ss_pred eecCCCeeeeccCceEEEEEeecCCCCcee
Q 033184 27 CYPKPGFLRITDKETLIVESNYSSSHDHTG 56 (125)
Q Consensus 27 CyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTG 56 (125)
+...|..+++..|+++++. +.+...|+=
T Consensus 14 ~~f~P~~i~v~~Gd~V~~~--n~~~~~H~v 41 (91)
T 1bxv_A 14 LAFEPSTIEIQAGDTVQWV--NNKLAPHNV 41 (91)
T ss_dssp SSEESSEEEECTTCEEEEE--ECSSCCEEE
T ss_pred cEEeCCEEEECCCCEEEEE--ECCCCCcEE
Confidence 6778999999999999986 333356753
No 5
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=77.13 E-value=2.6 Score=27.25 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=28.4
Q ss_pred cEEEeeeeecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 20 YIVGMSTCYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 20 YvVGMStCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
.-|-|+.-...|..|+|..|+++++...=+....|+
T Consensus 16 v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~ 51 (100)
T 4hci_A 16 IEVELNDDYFNPNVITIPINESTTLLLKNKGKSEHT 51 (100)
T ss_dssp EEEEEETTEEESSEEEECTTSCEEEEEEECSSSCEE
T ss_pred EEEEEECCEEeCCEEEECCCCEEEEEEEcCCCceEE
Confidence 457888888999999999999999986433334565
No 6
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=76.67 E-value=3.6 Score=25.40 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=22.3
Q ss_pred CcccEEEeeeeecCCCeeeeccCceEEEEEe
Q 033184 17 EAGYIVGMSTCYPKPGFLRITDKETLIVESN 47 (125)
Q Consensus 17 E~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~ 47 (125)
++|.|+.. .|.||+ ++..|.+++|..+
T Consensus 43 ~~G~Vi~q---~P~~G~-~v~~g~~V~l~vS 69 (71)
T 3ouv_A 43 PAGEVTGT---NPPAGT-TVPVDSVIELQVS 69 (71)
T ss_dssp CTTBEEEE---ESCTTC-EEETTSCEEEEEE
T ss_pred CCCEEEEe---eCCCCC-CcCCCCEEEEEEe
Confidence 57888875 699998 8899999998753
No 7
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=72.52 E-value=3.6 Score=26.03 Aligned_cols=35 Identities=20% Similarity=0.097 Sum_probs=25.0
Q ss_pred cEEEe----eeeecCCCeeeeccCceEEEEEeecCCCCcee
Q 033184 20 YIVGM----STCYPKPGFLRITDKETLIVESNYSSSHDHTG 56 (125)
Q Consensus 20 YvVGM----StCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTG 56 (125)
+-|-| ..+...|..++++.|+++++. |- ....|+=
T Consensus 3 ~~V~~~~~~~~~~F~P~~i~v~~G~~V~~~-n~-~~~~H~~ 41 (98)
T 1pcs_A 3 ATVKMGSDSGALVFEPSTVTIKAGEEVKWV-NN-KLSPHNI 41 (98)
T ss_dssp EEEEESCTTSCSSEESSEEEECTTCEEEEE-EC-SSCCEEE
T ss_pred EEEEEecCCCccEEeCCEEEECCCCEEEEE-EC-CCCCcEE
Confidence 34566 247888999999999999987 32 2345763
No 8
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=72.42 E-value=3.9 Score=26.21 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=25.4
Q ss_pred cEEEee----eeecCCCeeeeccCceEEEEEeecCCCCcee
Q 033184 20 YIVGMS----TCYPKPGFLRITDKETLIVESNYSSSHDHTG 56 (125)
Q Consensus 20 YvVGMS----tCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTG 56 (125)
+-|-|. .+...|..++|..|+++++. |.+ ...|+=
T Consensus 2 ~~V~m~~~~~~~~F~P~~i~v~~GdtV~~~-n~~-~~~H~v 40 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVPSKISVAAGEAIEFV-NNA-GFPHNI 40 (98)
T ss_dssp EEEEESCTTSCCSEESSEEEECTTCEEEEE-ECS-SCCEEE
T ss_pred EEEEEecCCCCcEEeCCEEEECCCCEEEEE-ECC-CCCEEE
Confidence 345663 47888999999999999996 333 346763
No 9
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=69.45 E-value=5.2 Score=25.48 Aligned_cols=29 Identities=14% Similarity=0.082 Sum_probs=21.1
Q ss_pred eecCCCeeeeccCceEEEEEeecCCCCceeh
Q 033184 27 CYPKPGFLRITDKETLIVESNYSSSHDHTGV 57 (125)
Q Consensus 27 CyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGv 57 (125)
....|..++++.|+++++. |.+ ...|+=+
T Consensus 12 ~~F~P~~i~v~~G~tV~~~-n~~-~~~H~~~ 40 (102)
T 1kdj_A 12 FKFYPDSITVSAGEAVEFT-LVG-ETGHNIV 40 (102)
T ss_dssp CCEESSEEEECTTCCEEEE-ECS-SSCBCCE
T ss_pred cEEeCCEEEECCCCEEEEE-ECC-CCCeEEE
Confidence 4567889999999999986 333 3467633
No 10
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=69.19 E-value=5.2 Score=25.42 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=20.5
Q ss_pred eecCCCeeeeccCceEEEEEeecCCCCcee
Q 033184 27 CYPKPGFLRITDKETLIVESNYSSSHDHTG 56 (125)
Q Consensus 27 CyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTG 56 (125)
+...|..++|+.|+++++. |.+ ...|+=
T Consensus 12 ~~F~P~~i~v~~G~tV~~~-n~~-~~~H~v 39 (99)
T 1plc_A 12 LAFVPSEFSISPGEKIVFK-NNA-GFPHNI 39 (99)
T ss_dssp SCEESSEEEECTTCEEEEE-ECS-SCCBCC
T ss_pred ceEeCCEEEECCCCEEEEE-ECC-CCceEE
Confidence 6678999999999999983 333 335753
No 11
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=68.59 E-value=11 Score=25.50 Aligned_cols=38 Identities=8% Similarity=-0.037 Sum_probs=28.7
Q ss_pred cccEEEee--eeecCCCeeeeccCceEEEEEee--cCCCCce
Q 033184 18 AGYIVGMS--TCYPKPGFLRITDKETLIVESNY--SSSHDHT 55 (125)
Q Consensus 18 ~GYvVGMS--tCyP~Pgs~kI~dGE~L~l~s~Y--s~~~~hT 55 (125)
.=.-|+|. .....|..++++.||+++|+..- +....|.
T Consensus 17 ~~v~V~~~~~~~~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~ 58 (140)
T 1qhq_A 17 QTVEVRAAPDALAFAQTSLSLPANTVVRLDFVNQNNLGVQHN 58 (140)
T ss_dssp EEEEEEBCSSSSSBSCSEEEEETTCEEEEEEEECCSSCCCBC
T ss_pred EEEEEEEeCCCceEeCCeEEECCCCEEEEEEECCCCCCCcee
Confidence 34567885 46778889999999999998865 4455676
No 12
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=68.34 E-value=7.7 Score=24.41 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=21.2
Q ss_pred eecCCCeeeeccCceEEEEEeecCCCCcee
Q 033184 27 CYPKPGFLRITDKETLIVESNYSSSHDHTG 56 (125)
Q Consensus 27 CyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTG 56 (125)
....|..+++..|+++++. |-+ ...|+=
T Consensus 14 ~~F~P~~i~v~~G~~V~~~-n~~-~~~H~~ 41 (97)
T 1b3i_A 14 PLYEPKALSISAGDTVEFV-MNK-VGPHNV 41 (97)
T ss_dssp EEEESSEEEECTTCEEEEE-ECS-SCCCCB
T ss_pred cEEeCCEEEECCCCEEEEE-ECC-CCCeEE
Confidence 6778999999999999987 322 345653
No 13
>2kue_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=66.29 E-value=6.5 Score=27.03 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=22.4
Q ss_pred CcccEEEeeeeecCCCeeeeccCceEEEEEe
Q 033184 17 EAGYIVGMSTCYPKPGFLRITDKETLIVESN 47 (125)
Q Consensus 17 E~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~ 47 (125)
++|.|+.- .|.||+ ++..|++++|..+
T Consensus 111 ~~G~Vi~q---~p~~G~-~v~~g~~V~l~vs 137 (138)
T 2kue_A 111 PAGEVTGT---NPPAGT-TVPVDSVIELQVS 137 (138)
T ss_dssp CCSBEEEE---SSCTTC-EEETTSCEEEEEE
T ss_pred CCCEEEEE---cCCCCC-CcCCCCEEEEEEe
Confidence 47999986 499998 7899999998763
No 14
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=64.95 E-value=6.5 Score=24.86 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=20.6
Q ss_pred eeecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 26 TCYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 26 tCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
.+...|..++|..|+++++. |.+ ...|+
T Consensus 11 ~~~F~P~~i~v~~G~tV~~~-n~~-~~~H~ 38 (99)
T 1byp_A 11 GLAFVPSDLSIASGEKITFK-NNA-GFPHN 38 (99)
T ss_dssp CCSEESSEEEECTTEEEEEE-ECS-SCCBC
T ss_pred cceEeCCEEEECCCCEEEEE-ECC-CCcce
Confidence 36778999999999999883 332 33566
No 15
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=63.42 E-value=7.8 Score=24.70 Aligned_cols=27 Identities=22% Similarity=0.169 Sum_probs=20.0
Q ss_pred eecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 27 CYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 27 CyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
....|..++++.|+++++. |.+ ...|+
T Consensus 15 ~~F~P~~i~v~~Gd~V~~~-n~~-~~~H~ 41 (106)
T 2gim_A 15 LVFEPAKLTIKPGDTVEFL-NNK-VPPHN 41 (106)
T ss_dssp SSEESSEEEECTTCEEEEE-ECS-SSCCC
T ss_pred ceEcCCEEEECCCCEEEEE-ECC-CCCce
Confidence 5667889999999999997 332 24565
No 16
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=61.84 E-value=7.8 Score=24.36 Aligned_cols=29 Identities=28% Similarity=0.159 Sum_probs=21.1
Q ss_pred eecCCCeeeeccCceEEEEEeecCCCCceeh
Q 033184 27 CYPKPGFLRITDKETLIVESNYSSSHDHTGV 57 (125)
Q Consensus 27 CyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGv 57 (125)
+...|..+++..|+++++. |.+ ...|+=+
T Consensus 13 ~~F~P~~i~v~~G~~V~~~-n~~-~~~H~~~ 41 (98)
T 2plt_A 13 LEFVPKTLTIKSGETVNFV-NNA-GFPHNIV 41 (98)
T ss_dssp SSEESSEEEECTTCEEEEE-ECS-SCCEEEE
T ss_pred ceEeCCEEEECCCCEEEEE-ECC-CCceEEE
Confidence 6778999999999999983 333 3357533
No 17
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=61.63 E-value=8.2 Score=26.37 Aligned_cols=27 Identities=11% Similarity=0.190 Sum_probs=22.2
Q ss_pred CCcccEEEeeeeecCCCeeeeccCceEEEEE
Q 033184 16 NEAGYIVGMSTCYPKPGFLRITDKETLIVES 46 (125)
Q Consensus 16 NE~GYvVGMStCyP~Pgs~kI~dGE~L~l~s 46 (125)
.+.|.|+.- .|.||+ ++..|++++|..
T Consensus 111 ~~~G~Vi~q---~p~~G~-~v~~g~~V~l~v 137 (139)
T 2kuf_A 111 SQHNRVVYQ---NPPAGT-GVNRDGIITLRF 137 (139)
T ss_dssp GGCCCEEEE---SSCTTS-EEETTCCEEEEE
T ss_pred CCCCEEEEE---cCCCCC-CCCCCCEEEEEE
Confidence 347999875 499998 789999999875
No 18
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=53.10 E-value=13 Score=23.39 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=20.1
Q ss_pred eeecCCCeeeeccCceEEEEEeecCCCCce
Q 033184 26 TCYPKPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 26 tCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
.+...|..++++.|+++++. |-. ...|+
T Consensus 13 ~~~f~p~~i~v~~Gd~V~~~-N~~-~~~H~ 40 (105)
T 3cvb_A 13 LFQFEPANVTVHPGDTVKWV-NNK-LPPHN 40 (105)
T ss_dssp CSCEESSEEEECTTEEEEEE-ECS-SCCEE
T ss_pred ccEEeCCEEEEcCCCEEEEE-ECC-CCCCe
Confidence 46667789999999999985 332 23565
No 19
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=53.10 E-value=13 Score=25.61 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=22.1
Q ss_pred eeecCCCeeeeccCceEEEEEeecCCCCceeh
Q 033184 26 TCYPKPGFLRITDKETLIVESNYSSSHDHTGV 57 (125)
Q Consensus 26 tCyP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGv 57 (125)
.+...|..++|..|+++++... +. .|+=+
T Consensus 15 ~~~F~P~~i~V~~GdtV~f~n~-d~--~H~v~ 43 (122)
T 2ux6_A 15 AMVFEPASLKVAPGDTVTFIPT-DK--GHNVE 43 (122)
T ss_dssp EEEEESSEEEECTTEEEEEEES-SS--SCCCE
T ss_pred CceEeCCEEEECCCCEEEEEEC-CC--CcEEE
Confidence 3788999999999999998743 32 56643
No 20
>2kud_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=52.53 E-value=14 Score=25.32 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=20.9
Q ss_pred ccEEEeeeeecCCCeeeeccCceEEEEEe
Q 033184 19 GYIVGMSTCYPKPGFLRITDKETLIVESN 47 (125)
Q Consensus 19 GYvVGMStCyP~Pgs~kI~dGE~L~l~s~ 47 (125)
|.|+.- .|.||+ ++..|++++|..+
T Consensus 114 G~Vi~q---~p~~G~-~v~~g~~V~l~vs 138 (140)
T 2kud_A 114 GKVIGT---NPPANQ-TSAITNVVIIIVG 138 (140)
T ss_dssp TSEEEE---SSCTTS-EEETTSCEEEEEE
T ss_pred CEEEEE---cCCCCC-CcCCCCEEEEEEe
Confidence 999874 499998 8899999998753
No 21
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=52.43 E-value=16 Score=22.38 Aligned_cols=7 Identities=29% Similarity=0.240 Sum_probs=2.7
Q ss_pred Hhhhhhh
Q 033184 107 AVGYWRR 113 (125)
Q Consensus 107 ~v~~~~k 113 (125)
.+.++||
T Consensus 31 ~~~~~RR 37 (44)
T 2ks1_B 31 IGLFMRR 37 (44)
T ss_dssp HHHHHHT
T ss_pred HHHHhhh
Confidence 3334333
No 22
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=51.94 E-value=21 Score=24.15 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=26.6
Q ss_pred cEEEe----eeeecCCCeeeeccCceEEEEEeecCCC-Ccee
Q 033184 20 YIVGM----STCYPKPGFLRITDKETLIVESNYSSSH-DHTG 56 (125)
Q Consensus 20 YvVGM----StCyP~Pgs~kI~dGE~L~l~s~Ys~~~-~hTG 56 (125)
+.|-| ..=...|..++++.||+++|+..-.... .|.=
T Consensus 19 ~~V~v~~~~~~~~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~ 60 (139)
T 2aan_A 19 VTIEIGSKGEELAFDKTELTVSAGQTVTIRFKNNSAVQQHNW 60 (139)
T ss_dssp EEEEEEBCTTSSSBSCSEEEECTTCEEEEEEECCCSSCCBCC
T ss_pred EEEEEEecCCccEEcCCeEEECCCCEEEEEEEeCCCCCCeeE
Confidence 55555 4456678889999999999987655444 5753
No 23
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=44.28 E-value=16 Score=25.78 Aligned_cols=28 Identities=18% Similarity=0.396 Sum_probs=21.4
Q ss_pred ecCCCeeeeccCceEEEEEeecCCCCceehh
Q 033184 28 YPKPGFLRITDKETLIVESNYSSSHDHTGVM 58 (125)
Q Consensus 28 yP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGvM 58 (125)
...|..|+|+.|++++++-. + ..|+=+.
T Consensus 18 ~F~P~~i~V~~GDTV~f~n~-~--~~Hnv~~ 45 (124)
T 3ef4_A 18 VFQPGFVKVEAGDTVKFVPT-D--KSHNAES 45 (124)
T ss_dssp EEESSEEEECTTCEEEEECS-S--SSCCCEE
T ss_pred EEeCCEEEECCCCEEEEEEC-C--CCccEEE
Confidence 46788999999999998843 2 5787554
No 24
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=43.00 E-value=19 Score=22.12 Aligned_cols=7 Identities=43% Similarity=0.434 Sum_probs=2.8
Q ss_pred Hhhhhhh
Q 033184 107 AVGYWRR 113 (125)
Q Consensus 107 ~v~~~~k 113 (125)
.+.++||
T Consensus 30 ~~~~~RR 36 (44)
T 2l2t_A 30 FAVYVRR 36 (44)
T ss_dssp HHHHHHT
T ss_pred HHHHhhh
Confidence 3444333
No 25
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=41.20 E-value=17 Score=22.26 Aligned_cols=23 Identities=26% Similarity=0.541 Sum_probs=15.5
Q ss_pred hhhHHHHHHHHHH---HH-Hhhhhhhc
Q 033184 92 VWGAFVLAGVAIT---AA-AVGYWRRN 114 (125)
Q Consensus 92 ~~~~v~v~g~a~~---vA-~v~~~~k~ 114 (125)
..++.+++|+++. +. ++.|||-.
T Consensus 7 ~malt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 7 TMALTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCceeEEEccc
Confidence 3466778888765 44 89896543
No 26
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=39.39 E-value=24 Score=20.78 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHhhhhhh
Q 033184 97 VLAGVAITAAAVGYWRR 113 (125)
Q Consensus 97 ~v~g~a~~vA~v~~~~k 113 (125)
+++|+++.++.+.++||
T Consensus 20 ~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 20 LLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHee
Confidence 44555555443333344
No 27
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=36.85 E-value=40 Score=23.57 Aligned_cols=31 Identities=23% Similarity=0.083 Sum_probs=23.4
Q ss_pred EEeee-eecCCCeeee-ccCceEEEEEeecCCC
Q 033184 22 VGMST-CYPKPGFLRI-TDKETLIVESNYSSSH 52 (125)
Q Consensus 22 VGMSt-CyP~Pgs~kI-~dGE~L~l~s~Ys~~~ 52 (125)
|+|.. =...|-+++| +.||++||...=+...
T Consensus 7 v~~~d~m~F~p~~i~V~k~G~~vtv~~~N~g~~ 39 (128)
T 1nwp_A 7 VDSTDQMSFNTKDIAIDKSCKTFTVELTHSGSL 39 (128)
T ss_dssp EEECTTSCBSCSEEEECTTCSEEEEEEEECSSC
T ss_pred EEeCCCccEecCEEEEecCCCEEEEEEEECCCC
Confidence 44543 3578989999 9999999998755554
No 28
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=34.78 E-value=54 Score=22.89 Aligned_cols=32 Identities=0% Similarity=-0.061 Sum_probs=23.8
Q ss_pred EEeee-eecCCCeeee-ccCceEEEEEeecCCCC
Q 033184 22 VGMST-CYPKPGFLRI-TDKETLIVESNYSSSHD 53 (125)
Q Consensus 22 VGMSt-CyP~Pgs~kI-~dGE~L~l~s~Ys~~~~ 53 (125)
|.|.. =...|-+++| +.||++||+..=+...+
T Consensus 6 v~~~d~m~F~p~~i~V~k~G~~vtv~~~N~g~~p 39 (128)
T 2iaa_C 6 IEGNDSMQFNTKSIVVDKTCKEFTINLKHTGKLP 39 (128)
T ss_dssp EEECTTSCBSCSEEEECTTCSEEEEEEEECSCSC
T ss_pred EEeCCCceEecCEEEEecCCcEEEEEEEECCCCc
Confidence 44444 3578999999 99999999987555543
No 29
>1eys_H Photosynthetic reaction center; membrane protein complex, electron transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A {Thermochromatium tepidum} SCOP: b.41.1.1 f.23.10.1
Probab=32.28 E-value=32 Score=27.79 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=25.5
Q ss_pred eehhhHHHHHHHHHHHH-HhhhhhhcccccCCc
Q 033184 90 AFVWGAFVLAGVAITAA-AVGYWRRNKYEDGYQ 121 (125)
Q Consensus 90 ~~~~~~v~v~g~a~~vA-~v~~~~k~~~~~gY~ 121 (125)
..-+|-++|+..-+..| .|.|.+|-++||||-
T Consensus 8 ~~d~a~~~~~~fw~ffa~li~yl~~e~~regyp 40 (259)
T 1eys_H 8 YIDAAQITIWAFWLFFFGLIIYLRREDKREGYP 40 (259)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTTSSSCS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence 34567778888888877 788989999999993
No 30
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=31.69 E-value=65 Score=22.45 Aligned_cols=31 Identities=3% Similarity=-0.090 Sum_probs=23.4
Q ss_pred EEeee-eecCCCeeee-ccCceEEEEEeecCCC
Q 033184 22 VGMST-CYPKPGFLRI-TDKETLIVESNYSSSH 52 (125)
Q Consensus 22 VGMSt-CyP~Pgs~kI-~dGE~L~l~s~Ys~~~ 52 (125)
|+|.. =...|-+++| +.||++||...=....
T Consensus 7 v~~~d~m~F~p~~i~V~k~G~~vtv~~~N~g~~ 39 (129)
T 2ccw_A 7 VESNDAMQYNVKEIVVDKSCKQFTMHLKHVGKM 39 (129)
T ss_dssp EEECTTSCBSCSEEEECTTCSEEEEEEEECSCC
T ss_pred EEeCCCccEecceEEEecCCCEEEEEEEECCCc
Confidence 45544 3567889999 9999999998755554
No 31
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=30.27 E-value=57 Score=21.02 Aligned_cols=26 Identities=15% Similarity=0.178 Sum_probs=19.3
Q ss_pred CCCeeeeccCceEEEEEeecCCCCce
Q 033184 30 KPGFLRITDKETLIVESNYSSSHDHT 55 (125)
Q Consensus 30 ~Pgs~kI~dGE~L~l~s~Ys~~~~hT 55 (125)
.|..+++..|+++++...=.....|.
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~~H~ 61 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPISEG 61 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSSCEE
T ss_pred cCCEEEEeCCCEEEEEEEECCCCeEE
Confidence 57789999999999976434334565
No 32
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=29.29 E-value=34 Score=23.92 Aligned_cols=28 Identities=14% Similarity=0.303 Sum_probs=20.7
Q ss_pred ecCCCeeeeccCceEEEEEeecCCCCceehh
Q 033184 28 YPKPGFLRITDKETLIVESNYSSSHDHTGVM 58 (125)
Q Consensus 28 yP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGvM 58 (125)
...|..++|+.|+++++... + . .|+=+.
T Consensus 19 ~F~P~~i~V~~GDtVtf~n~-~-~-~H~v~~ 46 (127)
T 3tu6_A 19 AFEPAVIRAQPGDTVTFVAK-D-K-GHNSAL 46 (127)
T ss_dssp EEESSEEEECTTCEEEEECS-S-S-SCCCEE
T ss_pred EEeCCEEEECCCCEEEEEEC-C-C-CceEEE
Confidence 56788999999999998753 2 2 576543
No 33
>1rzh_H Reaction center protein H chain; bacterial photosynthesis, proton TR pathway, revertant, integral membrane protein, photosynthes; HET: BCL BPH U10 HTO SPO LDA CDL; 1.80A {Rhodobacter sphaeroides} SCOP: b.41.1.1 f.23.10.1 PDB: 1e14_H* 1f6n_H* 1fnp_H* 1fnq_H* 1jgw_H* 1jgx_H* 1jgy_H* 1jgz_H* 1jh0_H* 1k6l_H* 1k6n_H* 1kby_H* 1l9b_H* 1l9j_H* 1m3x_H* 1mps_H* 1pcr_H* 1e6d_H* 1rg5_H* 1rgn_H* ...
Probab=29.19 E-value=39 Score=27.54 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=24.6
Q ss_pred eehhhHHHHHHHHHHHH-HhhhhhhcccccCCc
Q 033184 90 AFVWGAFVLAGVAITAA-AVGYWRRNKYEDGYQ 121 (125)
Q Consensus 90 ~~~~~~v~v~g~a~~vA-~v~~~~k~~~~~gY~ 121 (125)
..-++-++|+..-+..| .|.|.+|-++||||-
T Consensus 9 ~~D~Aq~~l~~Fw~ffa~Li~yL~~E~~REGYP 41 (260)
T 1rzh_H 9 NFDLASLAIYSFWIFLAGLIYYLQTENMREGYP 41 (260)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHTTSSSCS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 44567778888888877 788989999999993
No 34
>2kui_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=28.96 E-value=56 Score=24.91 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=22.4
Q ss_pred CcccEEEeeeeecCCCeeeeccCceEEEEEe
Q 033184 17 EAGYIVGMSTCYPKPGFLRITDKETLIVESN 47 (125)
Q Consensus 17 E~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~ 47 (125)
++|.|+.- .|.||+ ++..|.+++|...
T Consensus 179 ~~G~Vi~q---~p~~G~-~v~~g~~V~l~vs 205 (275)
T 2kui_A 179 PAGEVTGT---NPPAGT-TVPVDSVIELQVS 205 (275)
T ss_dssp CTTBEEEE---SSCTTC-EEETTSEEEEEEE
T ss_pred CCCEEEEe---cCCCCC-CcCCCCEEEEEEE
Confidence 57888875 499998 7899999999875
No 35
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.70 E-value=56 Score=20.02 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=29.2
Q ss_pred CCCCcccEEEeeeeecCCCeeeeccCceEEEEEeec
Q 033184 14 AGNEAGYIVGMSTCYPKPGFLRITDKETLIVESNYS 49 (125)
Q Consensus 14 aGNE~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~Ys 49 (125)
..+..-+++.+-.+.++++.+.++.||+|++...-.
T Consensus 6 ~~~~~~~~~alydy~~~~~eLs~~~Gd~i~vl~~~~ 41 (75)
T 2egc_A 6 SGNLKDVYVSIADYEGDEETAGFQEGVSMEVLERNP 41 (75)
T ss_dssp CSSCCEEEEECSCBCCCSSSCCBCTTCEEEECEECT
T ss_pred CCCCCeEEEECCCcCCCCCcCCCCCCCEEEEEEcCC
Confidence 445566788999999988889999999999987543
No 36
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=28.23 E-value=53 Score=22.73 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=21.2
Q ss_pred ecCCCeeeeccCceEEEEEeecCCCCceehh
Q 033184 28 YPKPGFLRITDKETLIVESNYSSSHDHTGVM 58 (125)
Q Consensus 28 yP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGvM 58 (125)
...|..++|+.||+++++.. + ..|+=+.
T Consensus 17 ~F~P~~i~V~~GdtV~f~~~-~--~~H~v~~ 44 (123)
T 3erx_A 17 VFEPAFVRAEPGDVINFVPT-D--KSHNVEA 44 (123)
T ss_dssp EEESSEEEECTTEEEEEEES-S--TTCCCEE
T ss_pred eEeCCEEEECCCCEEEEEEC-C--CCceEEE
Confidence 56788999999999999864 2 3576443
No 37
>2wjn_H Reaction center protein H chain; bacteriochlorophyll, lipidic-sponge phase, photosynthesis, R center, electron transport, cell membrane; HET: HEM FME BCB BPB MPG MQ7 NS5; 1.86A {Rhodopseudomonas viridis} PDB: 1prc_H* 1r2c_H* 1vrn_H* 1dxr_H* 2jbl_H* 2prc_H* 2i5n_H* 2wjm_H* 2x5u_H* 2x5v_H* 3d38_H* 3prc_H* 3t6e_H* 4ac5_H* 5prc_H* 6prc_H* 7prc_H* 3t6d_H* 3g7f_H*
Probab=26.84 E-value=54 Score=26.63 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=24.8
Q ss_pred eehhhHHHHHHHHHHHH-Hh-hhhhhcccccCCc
Q 033184 90 AFVWGAFVLAGVAITAA-AV-GYWRRNKYEDGYQ 121 (125)
Q Consensus 90 ~~~~~~v~v~g~a~~vA-~v-~~~~k~~~~~gY~ 121 (125)
..-+|-++|+..-+..| .| .|.+|-++||||-
T Consensus 9 ~~D~aq~~l~~Fw~ffa~Li~~yl~~E~~REGyP 42 (258)
T 2wjn_H 9 HLDIAQLVWYAQWLVIWTVVLLYLRREDRREGYP 42 (258)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHTHHHHTTSSSCS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhcccccccCCc
Confidence 34557778888878877 65 8888999999993
No 38
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=25.27 E-value=73 Score=23.54 Aligned_cols=32 Identities=3% Similarity=0.008 Sum_probs=23.9
Q ss_pred EEEeeee-ecCCCeeee-ccCceEEEEEeecCCC
Q 033184 21 IVGMSTC-YPKPGFLRI-TDKETLIVESNYSSSH 52 (125)
Q Consensus 21 vVGMStC-yP~Pgs~kI-~dGE~L~l~s~Ys~~~ 52 (125)
.|+|..= .+.|-+|+| +.||++||...=....
T Consensus 46 ~I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~ 79 (167)
T 3ay2_A 46 TVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQ 79 (167)
T ss_dssp EEEECTTSCBSCSEEEEETTCSSEEEEEEECSCS
T ss_pred EEEeCCCceEecceEEEecCCCEEEEEEEECCCC
Confidence 3555442 678999999 9999999998655554
No 39
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=25.13 E-value=75 Score=22.74 Aligned_cols=26 Identities=4% Similarity=-0.007 Sum_probs=20.3
Q ss_pred eecCCCeeeecc-CceEEEEEeecCCC
Q 033184 27 CYPKPGFLRITD-KETLIVESNYSSSH 52 (125)
Q Consensus 27 CyP~Pgs~kI~d-GE~L~l~s~Ys~~~ 52 (125)
=.+.|-+|.+.. ||++||..+-+...
T Consensus 13 M~F~p~~i~V~~~Ge~V~~~l~N~G~~ 39 (125)
T 3fsa_A 13 MQFNTNAITVDKSCKQFTVNLSHPGNL 39 (125)
T ss_dssp SCBSCSEEEECTTCSEEEEEEECCSSC
T ss_pred cEEecCEEEEecCCCEEEEEEEECCcc
Confidence 357888999975 99999998755544
No 40
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=24.74 E-value=80 Score=25.62 Aligned_cols=33 Identities=21% Similarity=0.532 Sum_probs=25.4
Q ss_pred CcccEEEe--eeeecCC--------CeeeeccCceEEEEEeec
Q 033184 17 EAGYIVGM--STCYPKP--------GFLRITDKETLIVESNYS 49 (125)
Q Consensus 17 E~GYvVGM--StCyP~P--------gs~kI~dGE~L~l~s~Ys 49 (125)
.+||++|+ .||+|.+ +-+.+..||+.+....+.
T Consensus 308 ~~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes~~~~~~i~ 350 (384)
T 3ty1_A 308 KQGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTYT 350 (384)
T ss_dssp TTCEEEEEEEESSCSSCHHHHHHTTCCEEECTTCEEEEEEEEE
T ss_pred CCccEEEEeCccCCCchhHHHHhCCCeEEECCCCEEEEEEEEE
Confidence 35699887 6888887 458899999988877654
No 41
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=24.43 E-value=84 Score=21.85 Aligned_cols=25 Identities=4% Similarity=-0.031 Sum_probs=20.2
Q ss_pred ecCCCeeeeccC-ceEEEEEeecCCC
Q 033184 28 YPKPGFLRITDK-ETLIVESNYSSSH 52 (125)
Q Consensus 28 yP~Pgs~kI~dG-E~L~l~s~Ys~~~ 52 (125)
...|-+++|+.| |++||...-....
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~ 39 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHM 39 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSS
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCC
Confidence 567889999999 9999998654443
No 42
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=23.55 E-value=78 Score=22.59 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=23.7
Q ss_pred CCCCcccEEEeeeeecCCCeeeeccCceEEEEEeecC
Q 033184 14 AGNEAGYIVGMSTCYPKPGFLRITDKETLIVESNYSS 50 (125)
Q Consensus 14 aGNE~GYvVGMStCyP~Pgs~kI~dGE~L~l~s~Ys~ 50 (125)
..+..+|+.|+..+-.+- .+..||+|++++.-..
T Consensus 92 ~~~~~~~l~~i~~~kF~~---~V~PGd~L~i~v~~~~ 125 (160)
T 4h4g_A 92 PENTLYYFVGIDNARFKR---VVEPGDQLILNVTFER 125 (160)
T ss_dssp ----CEEEEEEEEEEECS---CCCTTCEEEEEEEEEE
T ss_pred CceeEEEEeccceEEECc---ccCCCCEEEEEEEEEE
Confidence 345678999999887764 3567999999986544
No 43
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=21.68 E-value=60 Score=22.26 Aligned_cols=27 Identities=11% Similarity=0.210 Sum_probs=19.9
Q ss_pred ecCCCeeeeccCceEEEEEeecCCCCceeh
Q 033184 28 YPKPGFLRITDKETLIVESNYSSSHDHTGV 57 (125)
Q Consensus 28 yP~Pgs~kI~dGE~L~l~s~Ys~~~~hTGv 57 (125)
...|..|+|..|+++++... +. .|+=+
T Consensus 17 ~F~P~~i~V~~GdtV~f~~~-~~--~H~v~ 43 (123)
T 1paz_A 17 VFEPAYIKANPGDTVTFIPV-DK--GHNVE 43 (123)
T ss_dssp EEESSEEEECTTCEEEEEES-SS--SCCCE
T ss_pred eEeCCEEEECCCCEEEEEEC-CC--CeEEE
Confidence 45788999999999998643 32 57644
Done!