BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033186
MASSAIKSGALVNLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQ
HLRDLSFRVGSIYQFIGELHIQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADRM
NNTVT

High Scoring Gene Products

Symbol, full name Information P value
MDO1
MERISTEM DISORGANIZATION 1
protein from Arabidopsis thaliana 4.0e-35
Bt.100927
Uncharacterized protein
protein from Bos taurus 1.3e-06
TEN1
Uncharacterized protein
protein from Gallus gallus 4.3e-06
TEN1
CST complex subunit TEN1
protein from Homo sapiens 4.3e-06
TEN1
CST complex subunit TEN1
protein from Homo sapiens 4.3e-06
TEN1
Uncharacterized protein
protein from Sus scrofa 4.3e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033186
        (125 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2011781 - symbol:MDO1 "AT1G56260" species:3702...   380  4.0e-35   1
UNIPROTKB|F1MPU8 - symbol:Bt.100927 "Uncharacterized prot...   111  1.3e-06   1
UNIPROTKB|E1BYI8 - symbol:TEN1 "Uncharacterized protein" ...   106  4.3e-06   1
UNIPROTKB|I3L0C7 - symbol:TEN1 "CST complex subunit TEN1"...   106  4.3e-06   1
UNIPROTKB|Q86WV5 - symbol:TEN1 "CST complex subunit TEN1"...   106  4.3e-06   1
UNIPROTKB|F1RW05 - symbol:TEN1 "Uncharacterized protein" ...   106  4.3e-06   1


>TAIR|locus:2011781 [details] [associations]
            symbol:MDO1 "AT1G56260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0019827 "stem cell maintenance"
            evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
            [GO:0006661 "phosphatidylinositol biosynthetic process"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048367
            GO:GO:0019827 EMBL:BT011713 EMBL:AK221533 IPI:IPI00518355
            RefSeq:NP_176022.2 UniGene:At.49983 PRIDE:Q6NME7 DNASU:842079
            EnsemblPlants:AT1G56260.1 GeneID:842079 KEGG:ath:AT1G56260
            TAIR:At1g56260 eggNOG:NOG265119 HOGENOM:HOG000242144
            InParanoid:Q6NME7 OMA:SIYQFIG PhylomeDB:Q6NME7
            ProtClustDB:CLSN2681533 Genevestigator:Q6NME7 Uniprot:Q6NME7
        Length = 127

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 76/125 (60%), Positives = 98/125 (78%)

Query:     1 MASSAIKSGALVNLTELHPSSQFYEEGASLRVTGKLQDYAVEAAMAIIADGNAILKIDTQ 60
             MA S I+ G  + L EL+PSS FY+EG SLRVT  L+ Y+VE A+ +I DG   LKI+TQ
Sbjct:     1 MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQ 60

Query:    61 HLRDLSFRVGSIYQFIGELHI-QADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADR 119
             ++RD+SFRVGSIYQFIGELHI Q + EAILQAR GRNVDG+D+NLYR++++LLRQF  + 
Sbjct:    61 NIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQFLKEE 120

Query:   120 MNNTV 124
              N+ +
Sbjct:   121 DNSNM 125


>UNIPROTKB|F1MPU8 [details] [associations]
            symbol:Bt.100927 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0070188 "Stn1-Ten1 complex" evidence=IEA]
            GO:GO:0070188 OMA:FPWEINS GeneTree:ENSGT00390000017589
            EMBL:DAAA02049506 EMBL:DAAA02049507 IPI:IPI00923870
            Ensembl:ENSBTAT00000061618 Uniprot:F1MPU8
        Length = 122

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 31/99 (31%), Positives = 58/99 (58%)

Query:    26 EGASLRVTGKLQDYAV-EAAMAIIA----DGNAILKIDTQHLRDLSFRVGSIYQFIGELH 80
             +G +LR  G+L  Y + ++ + ++A    D + IL I T+ +     ++GS+Y  +GEL 
Sbjct:    21 DGDTLRTFGRLCSYDMTQSQVTLMAQLRSDQHPIL-ICTKLVEPFQAQLGSLYTVLGELE 79

Query:    81 IQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADR 119
              Q D   +++ARV   V+G++L L  Q+++  R +Q +R
Sbjct:    80 HQKDGSCVVKARVLTCVEGMNLPLLEQAIREQRLYQQER 118


>UNIPROTKB|E1BYI8 [details] [associations]
            symbol:TEN1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0070188 "Stn1-Ten1 complex" evidence=IEA] GO:GO:0070188
            OMA:FPWEINS GeneTree:ENSGT00390000017589 EMBL:AADN02029957
            IPI:IPI00581286 Ensembl:ENSGALT00000003305 Uniprot:E1BYI8
        Length = 121

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 28/98 (28%), Positives = 56/98 (57%)

Query:    26 EGASLRVTGKLQDYAVEAAMAIIAD--GNAI--LKIDTQHLRDLSFRVGSIYQFIGELHI 81
             EG +LR  G+L  Y +  + AI++   G+A   ++IDT  +     ++GS+Y  +GE   
Sbjct:    20 EGEALRTFGRLSCYDLARSEAILSTQHGSAQHHVRIDTTLVEPFEAQLGSLYVVLGEAEH 79

Query:    82 QADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADR 119
             +     +++AR+   V+G+++ L  Q++Q  R++  +R
Sbjct:    80 REGESPVIKARILTCVEGMNVPLLEQAIQEQRKYFQER 117


>UNIPROTKB|I3L0C7 [details] [associations]
            symbol:TEN1 "CST complex subunit TEN1" species:9606 "Homo
            sapiens" [GO:0070188 "Stn1-Ten1 complex" evidence=IEA]
            GO:GO:0070188 EMBL:AC040980 RefSeq:NP_001106795.2 UniGene:Hs.593566
            GeneID:100134934 KEGG:hsa:100134934 CTD:100134934 HGNC:HGNC:37242
            OMA:FPWEINS ProteinModelPortal:I3L0C7 PRIDE:I3L0C7
            Ensembl:ENST00000397640 Bgee:I3L0C7 Uniprot:I3L0C7
        Length = 123

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 29/99 (29%), Positives = 60/99 (60%)

Query:    26 EGASLRVTGKLQDY-AVEAAMAIIA----DGNAILKIDTQHLRDLSFRVGSIYQFIGELH 80
             +G++LR  G+L  Y  +++ + ++A    D + +L + T+ +     +VGS+Y  +GEL 
Sbjct:    22 DGSTLRTFGRLCLYDMIQSRVTLMAQHGSDQHQVL-VCTKLVEPFHAQVGSLYIVLGELQ 80

Query:    81 IQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADR 119
              Q D  ++++ARV   V+G++L L  Q+++  R ++ +R
Sbjct:    81 HQQDRGSVVKARVLTCVEGMNLPLLEQAIREQRLYKQER 119


>UNIPROTKB|Q86WV5 [details] [associations]
            symbol:TEN1 "CST complex subunit TEN1" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0070188 "Stn1-Ten1 complex" evidence=ISS] [GO:0000784 "nuclear
            chromosome, telomeric region" evidence=IDA] GO:GO:0003677
            GO:GO:0070188 EMBL:AC040980 EMBL:AK097104 EMBL:BX647274
            EMBL:BC047782 IPI:IPI00334671 RefSeq:NP_001106795.2
            UniGene:Hs.593566 ProteinModelPortal:Q86WV5 DIP:DIP-56901N
            IntAct:Q86WV5 STRING:Q86WV5 PRIDE:Q86WV5 Ensembl:ENST00000416485
            GeneID:100134934 KEGG:hsa:100134934 CTD:100134934
            GeneCards:GC17P073978 HGNC:HGNC:37242 HPA:HPA043486 MIM:613130
            neXtProt:NX_Q86WV5 PharmGKB:PA165431550 eggNOG:NOG41033
            HOGENOM:HOG000152364 HOVERGEN:HBG067571 InParanoid:Q86WV5
            OMA:FPWEINS OrthoDB:EOG4C2HBZ NextBio:20774766 ArrayExpress:Q86WV5
            Bgee:Q86WV5 Genevestigator:Q86WV5 Uniprot:Q86WV5
        Length = 122

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 29/99 (29%), Positives = 60/99 (60%)

Query:    26 EGASLRVTGKLQDY-AVEAAMAIIA----DGNAILKIDTQHLRDLSFRVGSIYQFIGELH 80
             +G++LR  G+L  Y  +++ + ++A    D + +L + T+ +     +VGS+Y  +GEL 
Sbjct:    21 DGSTLRTFGRLCLYDMIQSRVTLMAQHGSDQHQVL-VCTKLVEPFHAQVGSLYIVLGELQ 79

Query:    81 IQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADR 119
              Q D  ++++ARV   V+G++L L  Q+++  R ++ +R
Sbjct:    80 HQQDRGSVVKARVLTCVEGMNLPLLEQAIREQRLYKQER 118


>UNIPROTKB|F1RW05 [details] [associations]
            symbol:TEN1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070188 "Stn1-Ten1 complex" evidence=IEA] GO:GO:0070188
            OMA:FPWEINS GeneTree:ENSGT00390000017589 EMBL:CU928029
            RefSeq:XP_003131235.1 UniGene:Ssc.57779 Ensembl:ENSSSCT00000018719
            GeneID:100520449 KEGG:ssc:100520449 Uniprot:F1RW05
        Length = 122

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 30/99 (30%), Positives = 58/99 (58%)

Query:    26 EGASLRVTGKLQDYAV-EAAMAIIA----DGNAILKIDTQHLRDLSFRVGSIYQFIGELH 80
             +G +LR  G+L  Y + ++ + ++A    D + IL + T+ +     +VGS+Y  +GEL 
Sbjct:    21 DGNTLRTFGRLCSYDLTQSRVTLMAQHRSDQHRIL-VCTELVEPFQAQVGSLYTVLGELE 79

Query:    81 IQADCEAILQARVGRNVDGLDLNLYRQSLQLLRQFQADR 119
              Q    ++++ARV   V+G++L L  Q+++  RQ+  +R
Sbjct:    80 RQEGGGSVVKARVLTCVEGMNLPLLEQAIREQRQYLQER 118


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125       125   0.00091  102 3  11 22  0.48    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  517 (55 KB)
  Total size of DFA:  103 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.76u 0.17s 11.93t   Elapsed:  00:00:00
  Total cpu time:  11.76u 0.17s 11.93t   Elapsed:  00:00:00
  Start:  Fri May 10 17:30:07 2013   End:  Fri May 10 17:30:07 2013

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