Query 033188
Match_columns 125
No_of_seqs 126 out of 1116
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 10:53:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033188.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033188hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3104 PTR2 Dipeptide/tripept 99.8 2.5E-20 5.4E-25 150.7 10.3 113 12-124 8-125 (498)
2 PRK10207 dipeptide/tripeptide 99.7 8.4E-17 1.8E-21 130.9 11.2 100 14-113 3-102 (489)
3 PRK15462 dipeptide/tripeptide 99.6 6.8E-15 1.5E-19 120.3 10.9 91 21-111 5-95 (493)
4 PRK09584 tppB putative tripept 99.5 2.2E-13 4.8E-18 111.0 12.1 92 22-113 18-109 (500)
5 TIGR00924 yjdL_sub1_fam amino 99.5 3.1E-13 6.6E-18 109.5 12.8 96 18-113 3-100 (475)
6 KOG1237 H+/oligopeptide sympor 99.3 2.3E-11 5E-16 101.2 11.2 93 19-111 31-123 (571)
7 TIGR00926 2A1704 Peptide:H+ sy 99.0 8.5E-10 1.8E-14 93.1 7.5 74 39-112 1-74 (654)
8 PRK10054 putative transporter; 98.9 1.4E-08 3.1E-13 80.1 11.8 87 24-111 6-92 (395)
9 COG2223 NarK Nitrate/nitrite t 98.9 1.7E-08 3.6E-13 80.9 10.2 87 25-112 218-304 (417)
10 PRK05122 major facilitator sup 98.9 3.3E-08 7.2E-13 77.2 11.2 84 25-109 15-98 (399)
11 PRK09556 uhpT sugar phosphate 98.8 1.9E-08 4.1E-13 80.8 9.0 104 3-108 4-110 (467)
12 TIGR00882 2A0105 oligosacchari 98.8 8.3E-08 1.8E-12 75.2 12.1 79 26-105 3-81 (396)
13 PRK09528 lacY galactoside perm 98.8 7.9E-08 1.7E-12 75.9 12.1 78 25-103 10-87 (420)
14 PRK03893 putative sialic acid 98.8 1.2E-07 2.6E-12 76.0 12.5 99 11-111 5-104 (496)
15 PRK12382 putative transporter; 98.8 9.7E-08 2.1E-12 74.5 11.4 80 26-106 16-95 (392)
16 TIGR00886 2A0108 nitrite extru 98.8 1.1E-07 2.3E-12 72.9 11.0 83 28-111 4-86 (366)
17 PRK15011 sugar efflux transpor 98.8 2.8E-07 6E-12 72.4 13.5 85 21-106 212-296 (393)
18 PRK10642 proline/glycine betai 98.7 1.5E-07 3.3E-12 76.1 11.5 81 22-103 247-327 (490)
19 PRK09952 shikimate transporter 98.7 1.5E-07 3.2E-12 75.3 11.1 85 21-106 246-330 (438)
20 TIGR00891 2A0112 putative sial 98.7 2.8E-07 6E-12 71.1 12.2 90 20-111 7-96 (405)
21 PRK03699 putative transporter; 98.7 6.1E-07 1.3E-11 70.4 13.7 84 26-110 206-289 (394)
22 PRK11273 glpT sn-glycerol-3-ph 98.7 6.8E-08 1.5E-12 77.3 8.5 62 48-111 51-112 (452)
23 PRK11646 multidrug resistance 98.7 3.3E-07 7.1E-12 72.5 12.1 83 28-111 13-95 (400)
24 PRK15034 nitrate/nitrite trans 98.7 4.3E-07 9.3E-12 74.1 12.9 108 1-110 1-118 (462)
25 PRK10213 nepI ribonucleoside t 98.7 4.7E-07 1E-11 71.5 12.5 93 17-111 12-104 (394)
26 PRK11652 emrD multidrug resist 98.7 2.4E-07 5.2E-12 72.3 10.5 88 22-111 5-92 (394)
27 PRK10406 alpha-ketoglutarate t 98.7 2.8E-07 6E-12 73.3 10.9 79 23-102 241-319 (432)
28 TIGR00883 2A0106 metabolite-pr 98.7 3.5E-07 7.6E-12 69.9 11.1 79 23-102 217-295 (394)
29 PRK10133 L-fucose transporter; 98.7 5.5E-07 1.2E-11 72.3 12.3 87 21-109 22-108 (438)
30 PRK03633 putative MFS family t 98.7 3.9E-07 8.4E-12 71.1 11.1 86 24-111 5-90 (381)
31 PRK11551 putative 3-hydroxyphe 98.6 5E-07 1.1E-11 70.6 11.4 89 21-111 11-99 (406)
32 TIGR00897 2A0118 polyol permea 98.6 5.8E-07 1.3E-11 70.8 11.4 87 21-109 9-95 (402)
33 PRK10504 putative transporter; 98.6 8.8E-07 1.9E-11 70.8 12.1 84 25-110 10-93 (471)
34 PRK15075 citrate-proton sympor 98.6 4E-07 8.6E-12 72.5 10.1 69 32-101 245-313 (434)
35 PRK09556 uhpT sugar phosphate 98.6 7.2E-07 1.6E-11 71.7 11.3 79 26-105 259-337 (467)
36 TIGR00895 2A0115 benzoate tran 98.6 7.8E-07 1.7E-11 68.2 10.6 87 23-111 15-101 (398)
37 PLN00028 nitrate transmembrane 98.6 1.3E-06 2.9E-11 70.7 12.3 87 23-111 34-120 (476)
38 PRK03699 putative transporter; 98.6 1.3E-06 2.8E-11 68.6 11.6 88 22-111 4-91 (394)
39 TIGR00886 2A0108 nitrite extru 98.6 8E-07 1.7E-11 68.1 9.9 77 33-110 233-309 (366)
40 TIGR00890 2A0111 Oxalate/Forma 98.5 5.1E-07 1.1E-11 68.6 8.7 69 41-111 19-87 (377)
41 PF07690 MFS_1: Major Facilita 98.5 1.1E-06 2.5E-11 66.3 10.5 75 35-110 6-80 (352)
42 PRK15402 multidrug efflux syst 98.5 1E-06 2.2E-11 69.2 10.3 88 23-111 8-97 (406)
43 TIGR02332 HpaX 4-hydroxyphenyl 98.5 2E-06 4.4E-11 68.2 11.8 66 46-112 28-93 (412)
44 TIGR00711 efflux_EmrB drug res 98.5 1.8E-06 3.9E-11 68.7 11.5 83 27-110 257-339 (485)
45 PRK15034 nitrate/nitrite trans 98.5 9.9E-07 2.1E-11 72.0 9.9 78 27-107 254-331 (462)
46 PRK12307 putative sialic acid 98.5 2.3E-06 5E-11 67.3 11.5 87 22-110 15-101 (426)
47 PRK11043 putative transporter; 98.5 2.3E-06 4.9E-11 67.0 11.4 75 36-111 14-90 (401)
48 TIGR00879 SP MFS transporter, 98.5 6.2E-07 1.3E-11 70.0 8.1 53 58-111 68-120 (481)
49 PRK03545 putative arabinose tr 98.5 2.3E-06 5.1E-11 66.8 11.4 62 48-111 32-93 (390)
50 TIGR00710 efflux_Bcr_CflA drug 98.5 1.5E-06 3.4E-11 66.7 10.2 85 25-111 5-89 (385)
51 TIGR00899 2A0120 sugar efflux 98.5 1E-06 2.2E-11 67.6 8.9 76 34-110 6-82 (375)
52 PRK09874 drug efflux system pr 98.5 2.8E-06 6.2E-11 66.1 11.2 83 27-111 16-103 (408)
53 cd06174 MFS The Major Facilita 98.5 2.3E-06 4.9E-11 64.2 10.1 78 32-111 6-83 (352)
54 TIGR00896 CynX cyanate transpo 98.4 9.4E-06 2E-10 62.5 13.3 84 26-110 198-281 (355)
55 TIGR01272 gluP glucose/galacto 98.4 7.6E-06 1.7E-10 63.1 12.5 85 25-110 140-226 (310)
56 TIGR00891 2A0112 putative sial 98.4 2.2E-06 4.8E-11 66.1 9.5 64 38-102 251-314 (405)
57 PRK10406 alpha-ketoglutarate t 98.4 7.8E-06 1.7E-10 65.0 12.9 67 45-112 41-113 (432)
58 TIGR00890 2A0111 Oxalate/Forma 98.4 4.5E-06 9.8E-11 63.4 11.0 74 35-110 215-288 (377)
59 PRK09705 cynX putative cyanate 98.4 1E-05 2.2E-10 63.7 13.2 81 28-110 208-288 (393)
60 TIGR00885 fucP L-fucose:H+ sym 98.4 6.5E-06 1.4E-10 65.6 12.1 82 27-110 5-86 (410)
61 TIGR00900 2A0121 H+ Antiporter 98.4 3.2E-06 6.9E-11 64.1 9.9 76 33-110 7-82 (365)
62 TIGR00901 2A0125 AmpG-related 98.4 8.5E-06 1.9E-10 62.7 12.1 81 27-109 211-292 (356)
63 TIGR00899 2A0120 sugar efflux 98.4 9.5E-06 2.1E-10 62.2 12.2 68 41-109 215-282 (375)
64 TIGR00892 2A0113 monocarboxyla 98.4 6.8E-06 1.5E-10 66.1 11.8 59 52-111 45-103 (455)
65 PRK10091 MFS transport protein 98.4 5.4E-06 1.2E-10 64.8 11.0 84 26-111 4-87 (382)
66 PRK11663 regulatory protein Uh 98.4 2.6E-06 5.5E-11 67.9 9.3 67 43-111 41-107 (434)
67 PRK10473 multidrug efflux syst 98.4 7.2E-06 1.6E-10 64.0 11.4 81 29-111 7-87 (392)
68 PF12832 MFS_1_like: MFS_1 lik 98.4 7.9E-06 1.7E-10 51.2 9.4 58 42-101 17-74 (77)
69 PRK14995 methyl viologen resis 98.4 6.5E-06 1.4E-10 66.9 11.5 84 26-110 260-343 (495)
70 TIGR00897 2A0118 polyol permea 98.4 1.3E-05 2.9E-10 63.1 12.7 69 26-96 223-291 (402)
71 PRK09705 cynX putative cyanate 98.4 3.9E-06 8.5E-11 66.0 9.6 74 38-113 22-95 (393)
72 PRK15403 multidrug efflux syst 98.3 9.1E-06 2E-10 64.6 11.5 59 52-111 42-100 (413)
73 PRK10133 L-fucose transporter; 98.3 1.7E-05 3.7E-10 63.7 13.1 76 34-110 267-343 (438)
74 PRK11195 lysophospholipid tran 98.3 7.8E-06 1.7E-10 64.5 10.7 74 34-109 12-85 (393)
75 TIGR01299 synapt_SV2 synaptic 98.3 6E-06 1.3E-10 70.9 10.6 65 45-110 186-250 (742)
76 TIGR00711 efflux_EmrB drug res 98.3 1.2E-05 2.6E-10 64.0 11.7 67 43-111 20-86 (485)
77 PRK10473 multidrug efflux syst 98.3 1.3E-05 2.8E-10 62.5 11.2 67 44-111 222-288 (392)
78 PTZ00207 hypothetical protein; 98.3 2.2E-05 4.8E-10 66.0 13.1 69 41-112 43-111 (591)
79 TIGR00712 glpT glycerol-3-phos 98.3 2.1E-06 4.6E-11 68.4 6.9 61 48-110 49-109 (438)
80 PF13347 MFS_2: MFS/sugar tran 98.3 3.8E-06 8.2E-11 66.8 8.2 87 25-113 225-311 (428)
81 PRK15011 sugar efflux transpor 98.3 2.2E-05 4.8E-10 61.6 12.5 82 26-109 16-99 (393)
82 PRK14995 methyl viologen resis 98.3 1.5E-05 3.2E-10 64.8 11.6 67 43-111 24-90 (495)
83 PRK10091 MFS transport protein 98.3 1.1E-05 2.4E-10 63.0 10.5 71 38-109 212-282 (382)
84 TIGR00710 efflux_Bcr_CflA drug 98.3 2.3E-05 4.9E-10 60.2 11.5 74 36-110 217-290 (385)
85 PRK09952 shikimate transporter 98.2 2.4E-05 5.2E-10 62.6 11.9 90 22-112 19-114 (438)
86 TIGR00893 2A0114 d-galactonate 98.2 2.6E-05 5.6E-10 59.2 11.6 67 26-93 216-282 (399)
87 TIGR00881 2A0104 phosphoglycer 98.2 6.7E-06 1.5E-10 62.5 8.1 62 49-111 18-79 (379)
88 cd06174 MFS The Major Facilita 98.2 3.5E-05 7.5E-10 57.8 11.9 77 34-111 184-261 (352)
89 TIGR00889 2A0110 nucleoside tr 98.2 3.4E-05 7.4E-10 61.5 12.1 74 34-108 11-85 (418)
90 COG2814 AraJ Arabinose efflux 98.2 1.2E-05 2.7E-10 64.4 9.5 89 25-115 211-299 (394)
91 PF07690 MFS_1: Major Facilita 98.2 2E-05 4.4E-10 59.5 10.3 80 30-110 211-291 (352)
92 COG2271 UhpC Sugar phosphate p 98.2 2E-05 4.4E-10 63.7 10.6 86 25-110 252-339 (448)
93 PRK10077 xylE D-xylose transpo 98.2 1.7E-05 3.6E-10 63.3 10.1 54 56-110 50-103 (479)
94 PF06609 TRI12: Fungal trichot 98.2 1.2E-05 2.6E-10 67.6 9.5 63 46-110 64-126 (599)
95 KOG4686 Predicted sugar transp 98.2 1.1E-05 2.5E-10 63.1 8.6 97 14-111 253-350 (459)
96 PRK11551 putative 3-hydroxyphe 98.2 3.7E-05 8.1E-10 60.0 11.4 73 35-109 230-302 (406)
97 TIGR00895 2A0115 benzoate tran 98.2 4E-05 8.6E-10 58.7 11.3 78 29-108 254-331 (398)
98 PRK03893 putative sialic acid 98.2 2.9E-05 6.2E-10 62.3 10.8 64 43-107 293-356 (496)
99 TIGR00902 2A0127 phenyl propri 98.1 8.8E-05 1.9E-09 58.0 13.1 84 25-110 205-288 (382)
100 TIGR01301 GPH_sucrose GPH fami 98.1 2.4E-05 5.2E-10 64.2 10.2 77 32-110 11-92 (477)
101 TIGR00792 gph sugar (Glycoside 98.1 9.4E-06 2E-10 63.9 7.6 75 37-111 11-89 (437)
102 TIGR00893 2A0114 d-galactonate 98.1 1.3E-05 2.8E-10 60.8 7.9 63 48-111 16-78 (399)
103 PRK10504 putative transporter; 98.1 5.8E-05 1.3E-09 60.3 12.0 84 27-111 263-346 (471)
104 PRK15402 multidrug efflux syst 98.1 7.6E-05 1.7E-09 58.5 12.3 72 38-110 228-299 (406)
105 PRK11102 bicyclomycin/multidru 98.1 6.1E-05 1.3E-09 58.1 11.6 64 39-103 208-271 (377)
106 PRK03545 putative arabinose tr 98.1 5.2E-05 1.1E-09 59.3 11.1 73 32-106 212-284 (390)
107 PRK03633 putative MFS family t 98.1 8.3E-05 1.8E-09 58.0 12.0 69 39-109 214-282 (381)
108 PRK10642 proline/glycine betai 98.1 6.5E-05 1.4E-09 60.9 11.2 70 43-113 33-108 (490)
109 TIGR02332 HpaX 4-hydroxyphenyl 98.1 7.1E-05 1.5E-09 59.4 11.0 80 26-106 243-324 (412)
110 PRK11273 glpT sn-glycerol-3-ph 98.0 7.1E-05 1.5E-09 60.0 11.0 63 26-88 254-316 (452)
111 PRK11102 bicyclomycin/multidru 98.0 2.6E-05 5.6E-10 60.1 8.1 64 46-111 12-75 (377)
112 PRK11128 putative 3-phenylprop 98.0 0.00013 2.9E-09 56.9 12.2 82 27-110 207-288 (382)
113 TIGR00896 CynX cyanate transpo 98.0 1E-05 2.2E-10 62.3 5.7 59 50-109 24-82 (355)
114 PLN00028 nitrate transmembrane 98.0 0.0001 2.2E-09 59.7 11.7 54 38-92 265-318 (476)
115 PRK08633 2-acyl-glycerophospho 98.0 6.3E-05 1.4E-09 66.1 11.2 82 26-108 10-93 (1146)
116 PRK11010 ampG muropeptide tran 98.0 0.00012 2.7E-09 59.7 12.1 70 35-105 232-302 (491)
117 TIGR00712 glpT glycerol-3-phos 98.0 6.5E-05 1.4E-09 59.9 10.3 66 27-93 253-318 (438)
118 PRK09528 lacY galactoside perm 98.0 5.4E-05 1.2E-09 59.8 9.7 72 39-111 237-311 (420)
119 TIGR00900 2A0121 H+ Antiporter 98.0 0.00017 3.6E-09 54.6 12.0 84 26-110 211-295 (365)
120 TIGR00903 2A0129 major facilit 98.0 5.9E-05 1.3E-09 59.5 9.7 56 50-106 15-70 (368)
121 PRK15075 citrate-proton sympor 98.0 0.00015 3.2E-09 57.8 12.1 67 46-113 35-107 (434)
122 PRK10429 melibiose:sodium symp 98.0 2.8E-05 6.1E-10 62.8 8.0 75 36-111 17-96 (473)
123 PRK12307 putative sialic acid 98.0 0.00015 3.2E-09 57.0 11.8 66 42-109 248-313 (426)
124 PRK10489 enterobactin exporter 98.0 2.8E-05 6E-10 61.3 7.4 74 34-109 26-99 (417)
125 TIGR02718 sider_RhtX_FptX side 98.0 0.00014 2.9E-09 56.9 10.9 74 27-102 210-284 (390)
126 TIGR00879 SP MFS transporter, 97.9 8.4E-05 1.8E-09 58.0 9.4 65 44-110 303-367 (481)
127 PRK09848 glucuronide transport 97.9 4.6E-05 1E-09 60.8 7.9 85 26-111 229-313 (448)
128 PRK11663 regulatory protein Uh 97.9 0.00021 4.7E-09 56.9 11.7 61 28-88 246-306 (434)
129 PRK09848 glucuronide transport 97.9 5.8E-05 1.3E-09 60.3 8.3 73 36-108 19-95 (448)
130 TIGR00887 2A0109 phosphate:H+ 97.9 0.00018 3.9E-09 58.5 11.2 54 57-111 52-105 (502)
131 TIGR00894 2A0114euk Na(+)-depe 97.9 0.00025 5.5E-09 56.7 11.7 67 25-92 261-327 (465)
132 TIGR00792 gph sugar (Glycoside 97.9 0.0001 2.3E-09 58.0 9.2 85 25-111 222-306 (437)
133 PRK09669 putative symporter Ya 97.9 4.3E-05 9.3E-10 61.0 7.1 80 29-110 14-98 (444)
134 TIGR00805 oat sodium-independe 97.9 0.00016 3.6E-09 61.0 10.7 82 26-108 331-415 (633)
135 TIGR00881 2A0104 phosphoglycer 97.9 0.00016 3.5E-09 54.8 9.6 67 27-93 218-284 (379)
136 TIGR00898 2A0119 cation transp 97.8 4E-05 8.6E-10 61.8 6.0 59 52-111 115-176 (505)
137 TIGR00887 2A0109 phosphate:H+ 97.8 7E-05 1.5E-09 60.8 7.4 72 36-109 299-382 (502)
138 KOG0254 Predicted transporter 97.8 0.00022 4.7E-09 58.4 10.3 50 62-112 90-139 (513)
139 PF05631 DUF791: Protein of un 97.8 0.00029 6.2E-09 55.9 10.5 55 54-109 62-116 (354)
140 PF11700 ATG22: Vacuole efflux 97.8 0.00052 1.1E-08 56.3 12.4 77 25-102 281-359 (477)
141 PRK10429 melibiose:sodium symp 97.8 9.8E-05 2.1E-09 59.7 7.6 83 25-109 231-313 (473)
142 PRK12382 putative transporter; 97.8 0.00031 6.7E-09 54.8 9.7 70 38-111 229-298 (392)
143 PRK09874 drug efflux system pr 97.7 0.00033 7.2E-09 54.4 9.8 71 39-110 233-306 (408)
144 PRK10077 xylE D-xylose transpo 97.7 0.00039 8.5E-09 55.4 10.3 63 46-110 292-354 (479)
145 PF01306 LacY_symp: LacY proto 97.7 0.0003 6.6E-09 56.9 9.7 72 26-98 8-79 (412)
146 PRK05122 major facilitator sup 97.7 0.00055 1.2E-08 53.4 11.0 71 37-111 228-298 (399)
147 TIGR00805 oat sodium-independe 97.7 2.2E-05 4.9E-10 66.2 3.3 89 22-111 29-117 (633)
148 TIGR00806 rfc RFC reduced fola 97.7 0.00046 1E-08 57.0 10.6 66 44-110 44-110 (511)
149 COG2814 AraJ Arabinose efflux 97.7 0.00095 2.1E-08 53.7 12.2 89 23-113 11-99 (394)
150 PRK11902 ampG muropeptide tran 97.7 0.00083 1.8E-08 52.8 11.8 58 48-106 232-290 (402)
151 KOG0252 Inorganic phosphate tr 97.7 0.00012 2.6E-09 60.1 7.0 54 57-111 80-133 (538)
152 TIGR00885 fucP L-fucose:H+ sym 97.7 0.0012 2.5E-08 52.7 12.2 77 34-111 241-318 (410)
153 TIGR00902 2A0127 phenyl propri 97.7 0.0012 2.6E-08 51.6 12.1 54 38-93 17-70 (382)
154 KOG2532 Permease of the major 97.7 0.00055 1.2E-08 56.1 10.4 66 25-90 258-323 (466)
155 TIGR00889 2A0110 nucleoside tr 97.7 0.00056 1.2E-08 54.6 10.2 70 40-111 223-300 (418)
156 TIGR01299 synapt_SV2 synaptic 97.7 0.00071 1.5E-08 58.4 11.4 43 67-110 601-643 (742)
157 PF13347 MFS_2: MFS/sugar tran 97.6 5.3E-05 1.1E-09 60.2 3.8 77 35-112 11-92 (428)
158 PRK10213 nepI ribonucleoside t 97.6 0.0015 3.2E-08 51.6 11.9 69 26-96 217-286 (394)
159 TIGR00883 2A0106 metabolite-pr 97.6 0.00078 1.7E-08 51.4 10.0 37 75-112 49-85 (394)
160 TIGR00882 2A0105 oligosacchari 97.6 0.0012 2.7E-08 51.6 11.2 73 38-111 228-303 (396)
161 PRK11043 putative transporter; 97.6 0.0012 2.7E-08 51.5 10.9 66 38-105 216-281 (401)
162 KOG0569 Permease of the major 97.6 0.00068 1.5E-08 55.9 9.6 87 22-110 266-353 (485)
163 PRK11128 putative 3-phenylprop 97.6 0.0015 3.2E-08 51.0 11.0 53 38-92 17-69 (382)
164 COG0738 FucP Fucose permease [ 97.5 0.0015 3.3E-08 52.7 10.9 83 26-110 14-96 (422)
165 KOG0255 Synaptic vesicle trans 97.5 0.00021 4.6E-09 58.1 6.0 58 54-112 111-168 (521)
166 PRK10489 enterobactin exporter 97.5 0.0016 3.4E-08 51.3 10.8 70 41-111 239-308 (417)
167 PF03825 Nuc_H_symport: Nucleo 97.5 0.0026 5.6E-08 51.0 12.1 68 38-106 15-82 (400)
168 PRK11462 putative transporter; 97.5 0.00068 1.5E-08 54.9 8.6 76 37-112 21-100 (460)
169 COG2271 UhpC Sugar phosphate p 97.5 0.00092 2E-08 54.3 9.1 82 28-110 28-112 (448)
170 PRK08633 2-acyl-glycerophospho 97.5 0.0011 2.3E-08 58.5 10.2 71 39-110 246-317 (1146)
171 KOG2615 Permease of the major 97.5 0.00033 7.2E-09 56.4 6.4 52 60-112 67-118 (451)
172 TIGR00894 2A0114euk Na(+)-depe 97.5 0.00051 1.1E-08 55.0 7.5 54 55-109 70-123 (465)
173 COG2211 MelB Na+/melibiose sym 97.5 0.00098 2.1E-08 54.7 9.1 88 25-113 236-323 (467)
174 KOG1330 Sugar transporter/spin 97.4 0.00018 3.9E-09 58.9 4.2 82 28-111 36-117 (493)
175 COG2270 Permeases of the major 97.4 0.00053 1.1E-08 55.6 6.6 67 42-109 269-335 (438)
176 KOG2504 Monocarboxylate transp 97.4 0.0011 2.4E-08 54.8 8.4 81 29-110 46-129 (509)
177 PRK10054 putative transporter; 97.4 0.001 2.2E-08 52.6 7.7 77 34-111 215-293 (395)
178 COG2807 CynX Cyanate permease 97.3 0.0057 1.2E-07 49.0 11.8 84 26-110 209-292 (395)
179 TIGR00892 2A0113 monocarboxyla 97.3 0.0038 8.2E-08 50.3 11.1 70 27-97 243-313 (455)
180 PF06813 Nodulin-like: Nodulin 97.3 0.002 4.4E-08 48.8 8.4 59 50-110 26-84 (250)
181 PRK06814 acylglycerophosphoeth 97.3 0.0017 3.7E-08 57.5 9.0 35 62-97 53-87 (1140)
182 PRK11902 ampG muropeptide tran 97.2 0.0051 1.1E-07 48.3 10.5 74 35-111 9-87 (402)
183 COG2223 NarK Nitrate/nitrite t 97.2 0.0064 1.4E-07 49.2 10.8 90 19-110 8-97 (417)
184 PF00083 Sugar_tr: Sugar (and 97.2 5E-05 1.1E-09 60.2 -1.3 51 62-113 47-97 (451)
185 PRK11010 ampG muropeptide tran 97.2 0.0079 1.7E-07 49.1 11.3 82 26-110 13-99 (491)
186 TIGR00788 fbt folate/biopterin 97.1 0.0082 1.8E-07 48.8 10.9 86 22-110 22-114 (468)
187 PRK09669 putative symporter Ya 97.1 0.0042 9.1E-08 49.6 8.6 45 61-106 264-308 (444)
188 TIGR00901 2A0125 AmpG-related 97.1 0.0046 9.9E-08 47.5 8.5 59 48-109 11-74 (356)
189 PRK06814 acylglycerophosphoeth 97.1 0.0052 1.1E-07 54.6 9.8 81 26-107 226-306 (1140)
190 PRK11462 putative transporter; 97.1 0.014 3E-07 47.3 11.6 76 25-102 228-303 (460)
191 PRK11195 lysophospholipid tran 97.0 0.013 2.7E-07 46.3 10.9 59 41-100 221-279 (393)
192 KOG2533 Permease of the major 97.0 0.0033 7.1E-08 52.0 7.2 79 31-109 279-361 (495)
193 PF05977 MFS_3: Transmembrane 96.9 0.022 4.7E-07 47.4 11.8 55 54-109 38-92 (524)
194 PF05977 MFS_3: Transmembrane 96.8 0.012 2.7E-07 48.9 9.1 74 38-112 231-304 (524)
195 PF03209 PUCC: PUCC protein; 96.8 0.012 2.6E-07 47.6 8.7 75 38-112 221-295 (403)
196 KOG0254 Predicted transporter 96.7 0.0054 1.2E-07 50.2 6.6 86 23-111 292-378 (513)
197 PRK15403 multidrug efflux syst 96.7 0.044 9.5E-07 43.6 11.3 82 26-108 219-300 (413)
198 TIGR02718 sider_RhtX_FptX side 96.6 0.033 7E-07 43.5 10.3 70 29-100 5-77 (390)
199 KOG0569 Permease of the major 96.6 0.0059 1.3E-07 50.4 6.3 46 64-110 63-108 (485)
200 KOG2563 Permease of the major 96.6 0.02 4.3E-07 47.0 9.0 60 48-109 67-126 (480)
201 TIGR00880 2_A_01_02 Multidrug 96.6 0.0054 1.2E-07 39.7 4.8 40 70-110 7-46 (141)
202 KOG0253 Synaptic vesicle trans 96.5 0.025 5.4E-07 46.1 9.1 84 26-110 327-429 (528)
203 TIGR00898 2A0119 cation transp 96.5 0.016 3.4E-07 46.7 8.1 42 69-111 363-404 (505)
204 KOG3762 Predicted transporter 96.5 0.0071 1.5E-07 50.8 6.1 64 43-108 29-92 (618)
205 COG2211 MelB Na+/melibiose sym 96.5 0.015 3.3E-07 47.9 7.6 76 38-113 25-104 (467)
206 KOG2325 Predicted transporter/ 96.4 0.006 1.3E-07 50.4 5.0 90 18-109 27-119 (488)
207 KOG2504 Monocarboxylate transp 96.4 0.06 1.3E-06 44.7 10.8 65 27-93 300-364 (509)
208 TIGR00903 2A0129 major facilit 96.3 0.1 2.2E-06 41.1 11.5 62 25-92 192-253 (368)
209 KOG2532 Permease of the major 96.1 0.016 3.5E-07 47.5 6.1 54 55-109 67-120 (466)
210 PF06779 DUF1228: Protein of u 96.0 0.11 2.5E-06 33.1 8.4 62 50-112 16-77 (85)
211 KOG3626 Organic anion transpor 96.0 0.059 1.3E-06 46.7 9.1 80 29-108 396-477 (735)
212 PRK11652 emrD multidrug resist 96.0 0.18 3.9E-06 39.2 11.2 48 45-93 227-274 (394)
213 KOG0637 Sucrose transporter an 95.9 0.0074 1.6E-07 49.6 3.0 84 25-109 32-119 (498)
214 PRK11646 multidrug resistance 95.8 0.23 4.9E-06 39.2 11.3 65 44-110 227-292 (400)
215 KOG2816 Predicted transporter 95.7 0.052 1.1E-06 44.6 7.3 84 29-113 22-113 (463)
216 COG0477 ProP Permeases of the 95.3 0.38 8.3E-06 34.0 10.1 56 48-105 25-82 (338)
217 PF00083 Sugar_tr: Sugar (and 94.9 0.00034 7.4E-09 55.4 -7.7 82 26-110 253-334 (451)
218 PF03825 Nuc_H_symport: Nucleo 94.7 1.2 2.5E-05 35.9 12.2 72 38-110 220-291 (400)
219 PF01306 LacY_symp: LacY proto 94.4 1.8 4E-05 35.2 12.6 84 25-110 220-307 (412)
220 KOG0253 Synaptic vesicle trans 93.9 0.3 6.6E-06 40.0 7.1 58 50-108 102-159 (528)
221 COG0738 FucP Fucose permease [ 93.8 3.1 6.7E-05 34.0 13.5 57 43-100 254-310 (422)
222 PF03137 OATP: Organic Anion T 93.8 0.017 3.7E-07 48.2 0.0 77 32-108 312-390 (539)
223 KOG2563 Permease of the major 93.7 0.7 1.5E-05 38.2 9.0 51 55-105 295-345 (480)
224 PF06609 TRI12: Fungal trichot 93.6 0.84 1.8E-05 38.9 9.6 88 22-110 307-398 (599)
225 COG2807 CynX Cyanate permease 93.1 0.48 1E-05 38.3 7.1 61 48-109 34-94 (395)
226 PF06963 FPN1: Ferroportin1 (F 93.0 2.3 4.9E-05 34.8 11.0 57 47-105 280-336 (432)
227 TIGR00788 fbt folate/biopterin 92.0 0.3 6.6E-06 39.7 4.8 55 54-109 281-335 (468)
228 PRK10207 dipeptide/tripeptide 91.8 0.88 1.9E-05 37.3 7.4 70 39-109 283-363 (489)
229 KOG3764 Vesicular amine transp 91.4 0.35 7.5E-06 39.6 4.4 55 56-111 101-155 (464)
230 TIGR01301 GPH_sucrose GPH fami 90.4 5.1 0.00011 33.2 10.5 90 20-110 253-354 (477)
231 KOG4686 Predicted sugar transp 88.7 0.0094 2E-07 47.1 -6.2 64 48-111 66-129 (459)
232 TIGR01272 gluP glucose/galacto 88.5 5.7 0.00012 30.5 9.0 37 60-97 263-299 (310)
233 PF03137 OATP: Organic Anion T 88.4 0.14 3E-06 42.8 0.0 72 39-111 16-87 (539)
234 PF05978 UNC-93: Ion channel r 86.7 8.9 0.00019 26.9 8.5 51 57-108 33-83 (156)
235 KOG2533 Permease of the major 86.6 5.6 0.00012 33.1 8.4 48 54-102 74-121 (495)
236 KOG4332 Predicted sugar transp 85.0 0.17 3.6E-06 39.9 -1.2 55 50-105 61-115 (454)
237 PRK09584 tppB putative tripept 83.8 16 0.00036 29.9 9.9 76 34-110 281-368 (500)
238 PF03092 BT1: BT1 family; Int 83.7 8.4 0.00018 31.1 8.1 62 49-111 13-78 (433)
239 PF01770 Folate_carrier: Reduc 81.9 7.1 0.00015 31.9 6.9 64 45-109 23-88 (412)
240 PF11700 ATG22: Vacuole efflux 81.4 14 0.0003 30.5 8.6 46 64-110 73-119 (477)
241 KOG2816 Predicted transporter 81.1 4.7 0.0001 33.2 5.7 64 48-112 264-328 (463)
242 COG2270 Permeases of the major 80.2 3.1 6.7E-05 34.2 4.3 68 44-112 34-109 (438)
243 KOG1330 Sugar transporter/spin 78.3 6 0.00013 33.0 5.4 33 56-88 278-310 (493)
244 TIGR00880 2_A_01_02 Multidrug 71.9 21 0.00047 22.3 10.7 44 64-108 90-133 (141)
245 PRK03612 spermidine synthase; 70.9 61 0.0013 27.1 12.4 60 25-87 17-76 (521)
246 COG5336 Uncharacterized protei 70.8 19 0.00041 24.1 5.4 35 73-107 54-88 (116)
247 TIGR00924 yjdL_sub1_fam amino 70.4 48 0.001 27.0 8.9 72 39-110 286-367 (475)
248 KOG0252 Inorganic phosphate tr 70.0 7.6 0.00017 32.6 4.1 36 77-113 364-399 (538)
249 KOG0255 Synaptic vesicle trans 67.4 66 0.0014 26.1 9.9 36 76-112 365-400 (521)
250 KOG3097 Predicted membrane pro 67.4 66 0.0014 26.1 10.0 80 22-109 26-105 (390)
251 PF06645 SPC12: Microsomal sig 67.3 27 0.00058 21.6 5.9 28 61-88 7-34 (76)
252 KOG3626 Organic anion transpor 67.3 4.3 9.3E-05 35.5 2.3 85 25-110 96-180 (735)
253 COG3086 RseC Positive regulato 63.6 31 0.00068 24.3 5.6 44 56-100 67-110 (150)
254 PF09527 ATPase_gene1: Putativ 61.4 28 0.00061 19.7 5.8 31 72-102 11-41 (55)
255 KOG0637 Sucrose transporter an 60.4 35 0.00076 28.6 6.2 89 20-109 274-379 (498)
256 KOG4830 Predicted sugar transp 58.8 21 0.00045 28.3 4.4 50 43-94 35-93 (412)
257 KOG3764 Vesicular amine transp 58.8 7.1 0.00015 32.2 2.0 60 48-108 293-352 (464)
258 PF11872 DUF3392: Protein of u 57.9 53 0.0011 21.8 5.9 32 25-56 49-80 (106)
259 KOG3574 Acetyl-CoA transporter 56.2 22 0.00049 29.4 4.4 85 20-110 26-115 (510)
260 KOG2325 Predicted transporter/ 51.2 73 0.0016 26.7 6.8 47 22-68 259-305 (488)
261 TIGR00769 AAA ADP/ATP carrier 49.5 1.5E+02 0.0033 24.6 10.0 71 25-101 7-83 (472)
262 PF03209 PUCC: PUCC protein; 45.6 65 0.0014 26.3 5.5 54 54-109 8-67 (403)
263 KOG3762 Predicted transporter 44.6 1.4E+02 0.003 25.9 7.4 75 33-108 465-542 (618)
264 PRK15462 dipeptide/tripeptide 44.5 98 0.0021 25.8 6.6 45 64-109 141-185 (493)
265 PF02694 UPF0060: Uncharacteri 43.7 53 0.0011 21.9 3.9 50 60-110 53-102 (107)
266 PRK02237 hypothetical protein; 41.8 86 0.0019 20.9 4.7 48 61-109 56-103 (109)
267 PF08370 PDR_assoc: Plant PDR 41.5 42 0.00092 20.2 3.0 34 23-57 25-58 (65)
268 PRK11469 hypothetical protein; 41.5 1.3E+02 0.0029 21.6 10.5 55 57-112 130-185 (188)
269 TIGR02230 ATPase_gene1 F0F1-AT 37.6 1.2E+02 0.0026 19.9 5.3 15 79-93 60-74 (100)
270 PF10639 UPF0546: Uncharacteri 35.9 21 0.00045 23.9 1.1 46 59-106 63-109 (113)
271 COG1268 BioY Uncharacterized c 35.3 92 0.002 22.6 4.5 19 70-88 91-109 (184)
272 PF02659 DUF204: Domain of unk 32.5 1.1E+02 0.0023 17.9 6.0 47 57-104 16-66 (67)
273 PF00854 PTR2: POT family; In 30.7 2.5E+02 0.0055 21.7 8.7 73 37-110 43-120 (372)
274 COG3402 Uncharacterized conser 30.6 1.5E+02 0.0032 21.2 4.8 11 1-12 1-11 (161)
275 PF10785 NADH-u_ox-rdase: NADH 29.9 1.5E+02 0.0032 18.7 4.9 22 92-113 55-76 (86)
276 PF01770 Folate_carrier: Reduc 29.4 3.2E+02 0.007 22.4 9.6 45 64-109 288-332 (412)
277 KOG3827 Inward rectifier K+ ch 28.8 32 0.00068 28.0 1.3 39 22-60 60-98 (400)
278 PF02632 BioY: BioY family; I 28.2 1.7E+02 0.0037 20.3 4.8 23 69-92 61-83 (148)
279 KOG2615 Permease of the major 27.5 3.3E+02 0.0071 22.7 6.8 83 27-109 262-346 (451)
280 PRK13755 putative mercury tran 27.4 34 0.00074 23.5 1.1 46 80-125 66-111 (139)
281 COG3104 PTR2 Dipeptide/tripept 26.6 1.4E+02 0.0031 25.1 4.8 38 71-109 165-202 (498)
282 COG0382 UbiA 4-hydroxybenzoate 26.4 2.9E+02 0.0063 20.9 8.2 16 3-18 77-94 (289)
283 PF06963 FPN1: Ferroportin1 (F 26.0 3.7E+02 0.0081 22.1 11.1 53 49-102 26-78 (432)
284 PTZ00207 hypothetical protein; 25.9 1.1E+02 0.0023 26.3 4.0 59 51-111 378-448 (591)
285 KOG3098 Uncharacterized conser 25.9 3.9E+02 0.0085 22.3 8.5 55 55-110 272-330 (461)
286 PF07947 YhhN: YhhN-like prote 25.5 1.5E+02 0.0032 20.8 4.2 31 79-109 36-67 (185)
287 KOG0476 Cl- channel CLC-2 and 24.9 1.5E+02 0.0032 26.7 4.6 85 20-104 279-382 (931)
288 COG1457 CodB Purine-cytosine p 24.0 4.2E+02 0.0092 22.0 7.3 38 57-95 48-85 (442)
289 PF01679 Pmp3: Proteolipid mem 23.1 1.6E+02 0.0034 16.7 3.8 35 71-108 6-40 (51)
290 PF05631 DUF791: Protein of un 22.8 4.1E+02 0.0088 21.4 10.5 38 72-110 174-213 (354)
291 TIGR02840 spore_YtaF putative 22.7 3.1E+02 0.0067 20.0 5.9 50 56-106 152-203 (206)
292 PF11297 DUF3098: Protein of u 22.1 1.4E+02 0.0029 18.3 2.9 23 91-113 7-29 (69)
293 PF13493 DUF4118: Domain of un 21.6 1.1E+02 0.0023 19.2 2.6 20 69-88 83-102 (105)
294 PF03818 MadM: Malonate/sodium 20.5 1.9E+02 0.0041 17.2 3.2 30 78-109 24-53 (60)
295 COG3256 NorB Nitric oxide redu 20.4 4.4E+02 0.0096 23.2 6.5 67 54-122 299-370 (717)
No 1
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.83 E-value=2.5e-20 Score=150.74 Aligned_cols=113 Identities=16% Similarity=0.228 Sum_probs=103.1
Q ss_pred CCCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 033188 12 NDHDEPKINYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFN----MKNITAATIINIFNGTANFGTMIGAYLCDT 87 (125)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg----~~~~~a~~~~~~~~~~~~~~~~l~G~laDr 87 (125)
...+.+++.-+|||+++.++.+|++||++|||+.+.+..|++.+++ +|+++|....+.+....++++++|||+|||
T Consensus 8 ~~~~~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr 87 (498)
T COG3104 8 ENTTLEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADR 87 (498)
T ss_pred cccccccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566777899999999999999999999999999999998887 999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhcc-ccceeeeeecc
Q 033188 88 YFGRYNTLGFATVASFLVLASALEQR-VSVIKFYIGYH 124 (125)
Q Consensus 88 ~lGR~~~i~~~~~~~~lg~~l~~~~~-~~~~~f~ig~~ 124 (125)
++|+||++..|.+++++||++++.+. .+...|++|++
T Consensus 88 ~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~ 125 (498)
T COG3104 88 VLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLA 125 (498)
T ss_pred hcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHH
Confidence 99999999999999999999999885 56667777764
No 2
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.71 E-value=8.4e-17 Score=130.91 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=92.3
Q ss_pred CCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 14 HDEPKINYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
.++++..++|||.++.++..+++|+++||++..++++|+++++|++++++.++.+.+....++.++++|+++||++||||
T Consensus 3 ~~~~~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~ 82 (489)
T PRK10207 3 TTAPMGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKR 82 (489)
T ss_pred CCCCcchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHH
Confidence 35566677899999999999999999999999999999999999999999999999999999999999999999559999
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 033188 94 TLGFATVASFLVLASALEQR 113 (125)
Q Consensus 94 ~i~~~~~~~~lg~~l~~~~~ 113 (125)
++.++.+++.+|+++.+...
T Consensus 83 ~~~~g~~~~~~g~~~~~~~~ 102 (489)
T PRK10207 83 TIVLGAIVLAIGYFMTGMSL 102 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998887654
No 3
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.60 E-value=6.8e-15 Score=120.27 Aligned_cols=91 Identities=14% Similarity=0.235 Sum_probs=85.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 21 YRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
.+|||.++.++..+++|+++||++..+++.|+++.+|+++.++..+...+....+++++++|+++||++||||++.++.+
T Consensus 5 ~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 5 ASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999999999999999999999999997799999999999
Q ss_pred HHHHHHHHHhh
Q 033188 101 ASFLVLASALE 111 (125)
Q Consensus 101 ~~~lg~~l~~~ 111 (125)
+..+|+++++.
T Consensus 85 l~~lg~lll~~ 95 (493)
T PRK15462 85 LMAIGHVVLGA 95 (493)
T ss_pred HHHHHHHHHHH
Confidence 99999887754
No 4
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.51 E-value=2.2e-13 Score=111.04 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=83.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
+|+|.++.++..+++|+++||++..+++.|+++++|++++++....+.+....+..++++|+++||++|||+++..+.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 68889999999999999999999999999999999999999999988888888888899999999944999999999999
Q ss_pred HHHHHHHHhhcc
Q 033188 102 SFLVLASALEQR 113 (125)
Q Consensus 102 ~~lg~~l~~~~~ 113 (125)
..+|+.+++...
T Consensus 98 ~~ig~~l~~~~~ 109 (500)
T PRK09584 98 LAIGYALVAWSG 109 (500)
T ss_pred HHHHHHHHHHhc
Confidence 999988876543
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.51 E-value=3.1e-13 Score=109.50 Aligned_cols=96 Identities=17% Similarity=0.173 Sum_probs=87.9
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHH
Q 033188 18 KINYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSV--FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTL 95 (125)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~--lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i 95 (125)
+...+|+|.++.+...+++|+++||++..+++.|++++ +|+++.++....+.+.....++++++|+++||++||||++
T Consensus 3 ~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l 82 (475)
T TIGR00924 3 KTFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM 82 (475)
T ss_pred CcccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH
Confidence 34457899999999999999999999999999999887 9999999999999999999999999999999955999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 033188 96 GFATVASFLVLASALEQR 113 (125)
Q Consensus 96 ~~~~~~~~lg~~l~~~~~ 113 (125)
.++.++..+|+++++...
T Consensus 83 ~~~~~~~~~g~~~~~~~~ 100 (475)
T TIGR00924 83 VLGGIVLMLGHFMLAMSI 100 (475)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999998886543
No 6
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=99.31 E-value=2.3e-11 Score=101.16 Aligned_cols=93 Identities=35% Similarity=0.622 Sum_probs=88.7
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH
Q 033188 19 INYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFA 98 (125)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~ 98 (125)
..++.|+++.++++.+.+|+.++|++..++..|++.++|.+..++...++.+.+.....|++++++||.++||+++|.++
T Consensus 31 ~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~ 110 (571)
T KOG1237|consen 31 FKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIG 110 (571)
T ss_pred ceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 033188 99 TVASFLVLASALE 111 (125)
Q Consensus 99 ~~~~~lg~~l~~~ 111 (125)
.+++.+|..++..
T Consensus 111 s~i~~~G~~~lt~ 123 (571)
T KOG1237|consen 111 SLISLLGLFGLTL 123 (571)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999877653
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.01 E-value=8.5e-10 Score=93.12 Aligned_cols=74 Identities=16% Similarity=0.328 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
++|||+.+.+.+|+++.+|++++++..+...+....++.|+++|+++|+++||+|++.++.+++.+|+++++..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999998764
No 8
>PRK10054 putative transporter; Provisional
Probab=98.95 E-value=1.4e-08 Score=80.07 Aligned_cols=87 Identities=13% Similarity=0.086 Sum_probs=75.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHH
Q 033188 24 WKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASF 103 (125)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~ 103 (125)
+|+.+......++...+++....+++.|+++++|+++.+.+...+.+.....+..++.|+++||+ |||+++..+.+...
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHH
Confidence 35677777777778888888888999999999999999999999999999999999999999996 99999999998887
Q ss_pred HHHHHHhh
Q 033188 104 LVLASALE 111 (125)
Q Consensus 104 lg~~l~~~ 111 (125)
++.++...
T Consensus 85 ~~~~~~~~ 92 (395)
T PRK10054 85 SGFIAIPL 92 (395)
T ss_pred HHHHHHHH
Confidence 77766543
No 9
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.7e-08 Score=80.93 Aligned_cols=87 Identities=23% Similarity=0.141 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|..|.....-....-+|-+.+.+++.|+++++++++.++......+...+.+.=|+||++|||+ |.+|++.+..+...+
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 4455555555566667778999999999999999999999999999999999999999999997 999998888888887
Q ss_pred HHHHHhhc
Q 033188 105 VLASALEQ 112 (125)
Q Consensus 105 g~~l~~~~ 112 (125)
+...+..+
T Consensus 297 ~~~~l~~~ 304 (417)
T COG2223 297 AAALLSLF 304 (417)
T ss_pred HHHHHHcc
Confidence 77776644
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.87 E-value=3.3e-08 Score=77.18 Aligned_cols=84 Identities=15% Similarity=0.034 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|.+.......+....+.......++.|+.+++|.++.+.+.+.+.+.....++.++.|+++||+ ||||++..+.++..+
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCAL 93 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHH
Confidence 4455555555555666666667788888889999999999999999999999999999999997 999999999887766
Q ss_pred HHHHH
Q 033188 105 VLASA 109 (125)
Q Consensus 105 g~~l~ 109 (125)
+.+..
T Consensus 94 ~~~~~ 98 (399)
T PRK05122 94 SGLLY 98 (399)
T ss_pred HHHHH
Confidence 65543
No 11
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.84 E-value=1.9e-08 Score=80.84 Aligned_cols=104 Identities=16% Similarity=0.027 Sum_probs=70.0
Q ss_pred ccccCccCCCCCCCCccccCCchhHHHHHHHHHHHHHHHHHHHHH---HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHH
Q 033188 3 LENVKKTVGNDHDEPKINYRGWKAMPFIIGNETFEKLGAVGTLAN---LLIYLTSVFNMKNITAATIINIFNGTANFGTM 79 (125)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~---l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~ 79 (125)
+|.+.||.++.+.++.+ +.+.|..+.++...+......|..... ....+.+++|+++.+.+.+.+.+.....++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~ 82 (467)
T PRK09556 4 LNQVRKPTLDLPLEVQR-KMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKT 82 (467)
T ss_pred ccccCCCccCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 57778888877444443 233333444443443333333432221 22345678999999999999999999999999
Q ss_pred HHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 80 IGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 80 l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
++|+++||+ ||||++..+.++..++..+
T Consensus 83 ~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~ 110 (467)
T PRK09556 83 LVGYYADGK-NTKQFLPFLLILSAICMLG 110 (467)
T ss_pred hhhhHhhcc-CccchHHHHHHHHHHHHHH
Confidence 999999997 9999987776665554443
No 12
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.83 E-value=8.3e-08 Score=75.16 Aligned_cols=79 Identities=8% Similarity=-0.031 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
..+......++...++.....+++.|+++++|+++.+...+.+.......++.++.|+++||+ ||||.+..+.+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 455555566666667777778889999999999999999999999999999999999999997 9999998776554443
No 13
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.83 E-value=7.9e-08 Score=75.91 Aligned_cols=78 Identities=10% Similarity=-0.054 Sum_probs=64.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASF 103 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~ 103 (125)
+..+......++...+++....+++.|+++++|+++.+.+...+.+.....+++++.|+++||+ ||||++..+.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 3445554555666676777788999999999999999999999999999999999999999997 99999877655443
No 14
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.80 E-value=1.2e-07 Score=75.98 Aligned_cols=99 Identities=16% Similarity=0.099 Sum_probs=71.2
Q ss_pred CCCCCCCcccc-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 033188 11 GNDHDEPKINY-RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYF 89 (125)
Q Consensus 11 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~l 89 (125)
.|+.++.++.+ .+|+.+..+....+...+.++... .....+.+++|+++.+.....+.+.....++.+++|+++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~- 82 (496)
T PRK03893 5 TQNIPWYRHLNRAQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY- 82 (496)
T ss_pred CccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 55566666543 344444443333334344444443 344455678999999999999999999999999999999997
Q ss_pred chHHHHHHHHHHHHHHHHHHhh
Q 033188 90 GRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 90 GR~~~i~~~~~~~~lg~~l~~~ 111 (125)
|||+++..+.+...++.++...
T Consensus 83 g~r~~~~~~~~~~~~~~~~~~~ 104 (496)
T PRK03893 83 GRRLAMVISIVLFSVGTLACGF 104 (496)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888777654
No 15
>PRK12382 putative transporter; Provisional
Probab=98.79 E-value=9.7e-08 Score=74.49 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++......+......+.....++.|+.+++|.|+.+.....+.+.....++.|++|+++||+ ||||.+..+.+...++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLA 94 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHH
Confidence 444444444555555555556677888889999999999999999999999999999999997 9999999887766554
Q ss_pred H
Q 033188 106 L 106 (125)
Q Consensus 106 ~ 106 (125)
.
T Consensus 95 ~ 95 (392)
T PRK12382 95 G 95 (392)
T ss_pred H
Confidence 3
No 16
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.78 E-value=1.1e-07 Score=72.94 Aligned_cols=83 Identities=8% Similarity=-0.066 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 033188 28 PFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLA 107 (125)
Q Consensus 28 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~ 107 (125)
+......+......+.....++.++.+++|+++.+.+...+.......++.+++|+++||+ ||||++..+.+...++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 3344444444555666666667678889999999999999999999999999999999997 999999999999888877
Q ss_pred HHhh
Q 033188 108 SALE 111 (125)
Q Consensus 108 l~~~ 111 (125)
+...
T Consensus 83 ~~~~ 86 (366)
T TIGR00886 83 WAGL 86 (366)
T ss_pred HHHH
Confidence 7654
No 17
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.78 E-value=2.8e-07 Score=72.40 Aligned_cols=85 Identities=13% Similarity=0.141 Sum_probs=60.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 21 YRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
+++++..+..+.........++....+++.|+++++|+++.++....+...+...++.+++|+++||+ |||+.+..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~ 290 (393)
T PRK15011 212 RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAV 290 (393)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHH
Confidence 34545444333333333344445556788899888999999988888777777888899999999996 99998887765
Q ss_pred HHHHHH
Q 033188 101 ASFLVL 106 (125)
Q Consensus 101 ~~~lg~ 106 (125)
...+..
T Consensus 291 ~~~~~~ 296 (393)
T PRK15011 291 AGVCFY 296 (393)
T ss_pred HHHHHH
Confidence 544443
No 18
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.75 E-value=1.5e-07 Score=76.15 Aligned_cols=81 Identities=20% Similarity=0.216 Sum_probs=64.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
++|+.........++....+|++..+++.|+++.+|++..++............++.+++|+++||+ |||+++..+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~ 325 (490)
T PRK10642 247 KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVA 325 (490)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 3555555444455556788899999999999888999998888777777788888999999999997 999998888764
Q ss_pred HH
Q 033188 102 SF 103 (125)
Q Consensus 102 ~~ 103 (125)
..
T Consensus 326 ~~ 327 (490)
T PRK10642 326 LF 327 (490)
T ss_pred HH
Confidence 43
No 19
>PRK09952 shikimate transporter; Provisional
Probab=98.74 E-value=1.5e-07 Score=75.27 Aligned_cols=85 Identities=21% Similarity=0.086 Sum_probs=65.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 21 YRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
.++++.....+...++....+|+...+.+.|+++.+|++++..............++.++.|+++||+ ||||++..+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~ 324 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGAL 324 (438)
T ss_pred HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 34555555555566667788888888999999888999988776666677777788899999999996 99999888876
Q ss_pred HHHHHH
Q 033188 101 ASFLVL 106 (125)
Q Consensus 101 ~~~lg~ 106 (125)
+..++.
T Consensus 325 ~~~~~~ 330 (438)
T PRK09952 325 IGTLSA 330 (438)
T ss_pred HHHHHH
Confidence 554443
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.73 E-value=2.8e-07 Score=71.07 Aligned_cols=90 Identities=16% Similarity=0.093 Sum_probs=70.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHH
Q 033188 20 NYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFAT 99 (125)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~ 99 (125)
.+.+|+.............+..+......+ .+.+++|+++.+.....+.+.....++.++.|+++||+ |||+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 456666666555555565666655544444 45678999999999999999999999999999999997 9999999998
Q ss_pred HHHHHHHHHHhh
Q 033188 100 VASFLVLASALE 111 (125)
Q Consensus 100 ~~~~lg~~l~~~ 111 (125)
++..++.++...
T Consensus 85 ~~~~~~~~~~~~ 96 (405)
T TIGR00891 85 VLFSAGTLACGF 96 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888776643
No 21
>PRK03699 putative transporter; Provisional
Probab=98.71 E-value=6.1e-07 Score=70.39 Aligned_cols=84 Identities=12% Similarity=0.115 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++......++....++++..++|.|+++++|+|+.++....+.+.....++.+++|+++||+ |||+.+.....+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 344444444455566778888999999888999999999999999999999999999999996 9999988877666665
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
..+..
T Consensus 285 ~~~~~ 289 (394)
T PRK03699 285 MYLFV 289 (394)
T ss_pred HHHHH
Confidence 55443
No 22
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.71 E-value=6.8e-08 Score=77.31 Aligned_cols=62 Identities=11% Similarity=-0.013 Sum_probs=53.9
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...|+.++ |+++.+.+...+.+.....++.+++|+++||+ |||+++..+.++..++.++.+.
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~ 112 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGF 112 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHh
Confidence 34466667 99999999999999999999999999999997 9999999999888877776643
No 23
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.71 E-value=3.3e-07 Score=72.48 Aligned_cols=83 Identities=10% Similarity=0.084 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 033188 28 PFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLA 107 (125)
Q Consensus 28 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~ 107 (125)
...+...++...+++.+..+++.|+++++|+++.+.....+.......+..+++|+++||+ |||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 4444566666788888888899999999999999999999999999999999999999997 999999999998888887
Q ss_pred HHhh
Q 033188 108 SALE 111 (125)
Q Consensus 108 l~~~ 111 (125)
+...
T Consensus 92 ~~~~ 95 (400)
T PRK11646 92 TMAI 95 (400)
T ss_pred HHHH
Confidence 7654
No 24
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.70 E-value=4.3e-07 Score=74.15 Aligned_cols=108 Identities=10% Similarity=0.027 Sum_probs=76.8
Q ss_pred CcccccCcc---CCCCCCCCccccC---Cc---hhHHHHHHHHHHHHHHHHHHHHHHHHHhHh-hcCCCHHHHHHHHHHH
Q 033188 1 MELENVKKT---VGNDHDEPKINYR---GW---KAMPFIIGNETFEKLGAVGTLANLLIYLTS-VFNMKNITAATIINIF 70 (125)
Q Consensus 1 ~~~~~~~~~---~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-~lg~~~~~a~~~~~~~ 70 (125)
|++.|.|+. +.+++|+...+++ +. |.++............-+.. +-+...+.+ ++|++++|.....++.
T Consensus 1 ~~~~~~~~~~~~~~~w~pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~-~~l~~~~~~~~~~ls~~q~g~l~ai~ 79 (462)
T PRK15034 1 MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLF-SAVTVNLNKIGFNFTTDQLFLLTALP 79 (462)
T ss_pred CCcccccCCcccccCCCCCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhcCCCHHHHHHHHHHH
Confidence 677777765 5788888886443 22 44444433333322333333 223344444 7999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 71 NGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 71 ~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
.....++.++.|+++||+ |.|+++.++.++..+..++..
T Consensus 80 ~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~ 118 (462)
T PRK15034 80 SVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLG 118 (462)
T ss_pred HHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHH
Confidence 999999988889999997 999999999988888777765
No 25
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.69 E-value=4.7e-07 Score=71.47 Aligned_cols=93 Identities=11% Similarity=-0.041 Sum_probs=70.0
Q ss_pred CccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHH
Q 033188 17 PKINYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLG 96 (125)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~ 96 (125)
.+..+.+|+..........+.....|.....++.+. +++|+++++.....+.+.....++.++.|+++||+ ||||++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~ 89 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVI 89 (394)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHH
Confidence 334445776655444444444444444445555554 68899999999999999999999999999999997 9999999
Q ss_pred HHHHHHHHHHHHHhh
Q 033188 97 FATVASFLVLASALE 111 (125)
Q Consensus 97 ~~~~~~~lg~~l~~~ 111 (125)
.+.++..++.++...
T Consensus 90 ~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 90 LFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888777654
No 26
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.68 E-value=2.4e-07 Score=72.30 Aligned_cols=88 Identities=11% Similarity=0.059 Sum_probs=67.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
+.+|..+.......+.....+.....++.+ .+++|.|+.+.....+.+.....++.++.|+++||+ ||||++..+.+.
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 355666666665555555554333334444 478999999999999999999999999999999997 999999999988
Q ss_pred HHHHHHHHhh
Q 033188 102 SFLVLASALE 111 (125)
Q Consensus 102 ~~lg~~l~~~ 111 (125)
..++..+...
T Consensus 83 ~~~~~~~~~~ 92 (394)
T PRK11652 83 FILGTLVALF 92 (394)
T ss_pred HHHHHHHHHH
Confidence 8887776543
No 27
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.68 E-value=2.8e-07 Score=73.32 Aligned_cols=79 Identities=15% Similarity=0.063 Sum_probs=60.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
+++.....++........+|+...+++.|+.+.+|++..++....++......+..++.|+++||+ |||+.+..+.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~ 319 (432)
T PRK10406 241 NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLA 319 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHH
Confidence 333333334444444677888889999999888999998888888887788888888999999996 9999887766543
No 28
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.67 E-value=3.5e-07 Score=69.90 Aligned_cols=79 Identities=18% Similarity=0.060 Sum_probs=64.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
.++..+......++....++....+++.|.++++|.++.++............++.+++|+++||+ |||+.+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~ 295 (394)
T TIGR00883 217 HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLA 295 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 333455555666667777888888899999888999999999999999999999999999999996 9999877555433
No 29
>PRK10133 L-fucose transporter; Provisional
Probab=98.66 E-value=5.5e-07 Score=72.35 Aligned_cols=87 Identities=10% Similarity=-0.097 Sum_probs=69.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 21 YRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
+++..++.....+.+...+.........|.+ ++.+|.++.+.....+.+.....++.++.|+++||+ ||||++..+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~ 99 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLF 99 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4444555555555555555555555555655 788999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHH
Q 033188 101 ASFLVLASA 109 (125)
Q Consensus 101 ~~~lg~~l~ 109 (125)
++.+|.++.
T Consensus 100 ~~~~~~~l~ 108 (438)
T PRK10133 100 LYALGAALF 108 (438)
T ss_pred HHHHHHHHH
Confidence 999998775
No 30
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.66 E-value=3.9e-07 Score=71.14 Aligned_cols=86 Identities=9% Similarity=0.052 Sum_probs=73.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHH
Q 033188 24 WKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASF 103 (125)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~ 103 (125)
.|.++.++...+........+...++.|.. ++|.++.+...+.+.+.....+++++.|+++||+ ||||++..+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 356777777777777777777788888884 6799999999999999999999999999999997 99999999999888
Q ss_pred HHHHHHhh
Q 033188 104 LVLASALE 111 (125)
Q Consensus 104 lg~~l~~~ 111 (125)
++....+.
T Consensus 83 ~~~~~~~~ 90 (381)
T PRK03633 83 AGCAGLGL 90 (381)
T ss_pred HHHHHHHH
Confidence 88776654
No 31
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.65 E-value=5e-07 Score=70.59 Aligned_cols=89 Identities=13% Similarity=-0.012 Sum_probs=67.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 21 YRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
+.+|..+.......+.+.+..+......+.. .+++|+++.+.+...+.......++.++.|+++||+ ||||++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRM-AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 3455555555555555555555554444444 477999999999999999999999999999999997 99999999988
Q ss_pred HHHHHHHHHhh
Q 033188 101 ASFLVLASALE 111 (125)
Q Consensus 101 ~~~lg~~l~~~ 111 (125)
+..++.++...
T Consensus 89 ~~~~~~~~~~~ 99 (406)
T PRK11551 89 LFGLFSLATAQ 99 (406)
T ss_pred HHHHHHHHHHH
Confidence 87777665543
No 32
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.63 E-value=5.8e-07 Score=70.77 Aligned_cols=87 Identities=10% Similarity=0.007 Sum_probs=70.9
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 21 YRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
-+.||.+.......+....+.+....+++.|+ +++|+++.+.....+.+.....++.+++|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 35566666666666666666666666778887 67899999999999999999999999999999997 99999999998
Q ss_pred HHHHHHHHH
Q 033188 101 ASFLVLASA 109 (125)
Q Consensus 101 ~~~lg~~l~ 109 (125)
+..++.++.
T Consensus 87 ~~~~~~~~~ 95 (402)
T TIGR00897 87 LWCVGHAAF 95 (402)
T ss_pred HHHHHHHHH
Confidence 887776543
No 33
>PRK10504 putative transporter; Provisional
Probab=98.61 E-value=8.8e-07 Score=70.77 Aligned_cols=84 Identities=13% Similarity=-0.047 Sum_probs=68.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
+..+.+....++....++.+...++.+. +++|.++.+..++.+.+.....++.+++|+++||+ ||||++..+.++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3455555566666777777777778877 56999999999999999999999999999999997 999999988887777
Q ss_pred HHHHHh
Q 033188 105 VLASAL 110 (125)
Q Consensus 105 g~~l~~ 110 (125)
+.++..
T Consensus 88 ~~~~~~ 93 (471)
T PRK10504 88 GSLFCA 93 (471)
T ss_pred HHHHHH
Confidence 776544
No 34
>PRK15075 citrate-proton symporter; Provisional
Probab=98.61 E-value=4e-07 Score=72.47 Aligned_cols=69 Identities=14% Similarity=0.012 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 32 GNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 32 ~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
...+.....++++..+.|.|+++.+|++..++............++.+++|+++||+ ||||.+..+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~ 313 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVL 313 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHH
Confidence 333445666778888899999888999999988888888888889999999999996 999988776543
No 35
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.60 E-value=7.2e-07 Score=71.70 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++......++....+++...++|.|+++.+|++..++............++.+++|+++||+ |||+.+........++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHH
Confidence 345555555555666777788899999989999999999998888889999999999999996 9998776654433333
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=98.58 E-value=7.8e-07 Score=68.20 Aligned_cols=87 Identities=10% Similarity=0.064 Sum_probs=63.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
+|+.+.......+.....++... +...++.+++|+++.+.....+.......++.++.|+++||+ |||+.+..+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMG-FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 34444444444444444444333 333445578999999999999999999999999999999997 9999999999888
Q ss_pred HHHHHHHhh
Q 033188 103 FLVLASALE 111 (125)
Q Consensus 103 ~lg~~l~~~ 111 (125)
.++.++...
T Consensus 93 ~~~~~~~~~ 101 (398)
T TIGR00895 93 SVFTLLCAL 101 (398)
T ss_pred HHHHHHHHH
Confidence 887776653
No 37
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.58 E-value=1.3e-06 Score=70.69 Aligned_cols=87 Identities=10% Similarity=0.002 Sum_probs=64.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
+++.+.......++.....+.+...+ .++.+++|+++.+.+.+.+.+.....++.+++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 44444444444444455555444333 355688999999999988888888889999999999996 9999999988888
Q ss_pred HHHHHHHhh
Q 033188 103 FLVLASALE 111 (125)
Q Consensus 103 ~lg~~l~~~ 111 (125)
.++.++.+.
T Consensus 112 ~~~~~~~~~ 120 (476)
T PLN00028 112 APAVFCMSL 120 (476)
T ss_pred HHHHHHHHH
Confidence 777766543
No 38
>PRK03699 putative transporter; Provisional
Probab=98.56 E-value=1.3e-06 Score=68.56 Aligned_cols=88 Identities=13% Similarity=0.036 Sum_probs=68.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
+|+|..+......+......+.....++.. .+++|+|+++.....+.......++.+++|+++||+ ||||++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPI-AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 455666665555555555545454445554 478999999999999999999999999999999996 999999999988
Q ss_pred HHHHHHHHhh
Q 033188 102 SFLVLASALE 111 (125)
Q Consensus 102 ~~lg~~l~~~ 111 (125)
..++.++.+.
T Consensus 82 ~~i~~~l~~~ 91 (394)
T PRK03699 82 MILAVAGLMF 91 (394)
T ss_pred HHHHHHHHHH
Confidence 8888776654
No 39
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.55 E-value=8e-07 Score=68.11 Aligned_cols=77 Identities=10% Similarity=0.120 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 33 NETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 33 ~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
..++....++++..+.+.|+++.+|+++.++............++.+++|+++||+ |||+.+..+.+....+..++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~ 309 (366)
T TIGR00886 233 LYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGAFLVV 309 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHHHHHH
Confidence 33344455667778889999888999999999888889999999999999999996 999988887776666665554
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.55 E-value=5.1e-07 Score=68.60 Aligned_cols=69 Identities=13% Similarity=0.021 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 41 AVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 41 ~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.|... .+..++.+++|+++.+.....+.+.....++.++.|+++||+ |||+++..+.++..++.++.+.
T Consensus 19 ~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 19 VYTWT-LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAI 87 (377)
T ss_pred Hhhhh-hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHH
Confidence 44443 345566688999999999999999999999999999999997 9999999999988888877654
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.54 E-value=1.1e-06 Score=66.34 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 35 TFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 35 ~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
+............++.++.+++|.++.+.+...+.+.....++.++.|+++||+ ||||++..+.++..++..+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 334444544545555577789999999999999999999999999999999996 999999999999998844443
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.53 E-value=1e-06 Score=69.16 Aligned_cols=88 Identities=17% Similarity=0.052 Sum_probs=68.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHH--hHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIY--LTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~y--l~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
+.+..+..+.....+...+++...+.+.+ +.+++|.++.+.....+.+.....++.++.|+++||+ ||||++..+.+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~ 86 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVA 86 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 34556666666666666665444444432 3478999999999999999999999999999999997 99999999988
Q ss_pred HHHHHHHHHhh
Q 033188 101 ASFLVLASALE 111 (125)
Q Consensus 101 ~~~lg~~l~~~ 111 (125)
...++.++...
T Consensus 87 ~~~~~~~~~~~ 97 (406)
T PRK15402 87 FFILTCLAILL 97 (406)
T ss_pred HHHHHHHHHHH
Confidence 88877666543
No 43
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.52 E-value=2e-06 Score=68.23 Aligned_cols=66 Identities=5% Similarity=-0.066 Sum_probs=58.0
Q ss_pred HHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 46 ANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 46 ~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
.+....+++++|+++.+.....+.+.....++.+++|+++||+ ||||++..+.++..++.++.+..
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~ 93 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFA 93 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 3344577889999999999999999999999999999999997 99999999999988888877643
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.52 E-value=1.8e-06 Score=68.72 Aligned_cols=83 Identities=13% Similarity=0.078 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
.+......+.....+++...+++.|+++.+|+++.++............++.+++|+++||+ |||+.+..+.++..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHH
Confidence 33334444555677777778899999988999999999999999999999999999999996 99999999988888887
Q ss_pred HHHh
Q 033188 107 ASAL 110 (125)
Q Consensus 107 ~l~~ 110 (125)
.++.
T Consensus 336 ~~~~ 339 (485)
T TIGR00711 336 YWRA 339 (485)
T ss_pred HHHh
Confidence 7765
No 45
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.51 E-value=9.9e-07 Score=72.04 Aligned_cols=78 Identities=9% Similarity=0.022 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
.|....+.++..-+|.+...++|.|+++.+ +.........+......+..|++|++|||+ |++|++.++.+...++.
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHH
Confidence 455555556666666678778999987755 455555556667788999999999999997 99999999888666665
Q ss_pred H
Q 033188 107 A 107 (125)
Q Consensus 107 ~ 107 (125)
.
T Consensus 331 ~ 331 (462)
T PRK15034 331 A 331 (462)
T ss_pred H
Confidence 3
No 46
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.50 E-value=2.3e-06 Score=67.25 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=64.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
.+++.........+.....++.. .+...+..+++|+++.+.....+.+.....++.++.|+++||+ |||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 33444433333333333333333 3444455678999999999999999999999999999999997 999999999998
Q ss_pred HHHHHHHHh
Q 033188 102 SFLVLASAL 110 (125)
Q Consensus 102 ~~lg~~l~~ 110 (125)
..++.++.+
T Consensus 93 ~~~~~~~~~ 101 (426)
T PRK12307 93 YSVGTGLSG 101 (426)
T ss_pred HHHHHHHHH
Confidence 888877654
No 47
>PRK11043 putative transporter; Provisional
Probab=98.50 E-value=2.3e-06 Score=66.96 Aligned_cols=75 Identities=19% Similarity=0.185 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHH--hHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 36 FEKLGAVGTLANLLIY--LTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 36 ~~~~~~y~~~~~l~~y--l~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
....++.....+.|.+ ..+++|.++.+.....+.+.....++.+++|+++||+ |||+.+..+.++..++..+...
T Consensus 14 ~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 14 LSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHH
Confidence 3455555666666655 5678999999999999999999999999999999997 9999999998888777766543
No 48
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.49 E-value=6.2e-07 Score=70.02 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 58 MKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 58 ~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.+..+.....+.+.....++.+++|+++||+ ||||++..+.++..++.++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~ 120 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGL 120 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHH
Confidence 3488999999999999999999999999997 9999999999988888777643
No 49
>PRK03545 putative arabinose transporter; Provisional
Probab=98.49 E-value=2.3e-06 Score=66.84 Aligned_cols=62 Identities=13% Similarity=0.037 Sum_probs=53.8
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
++. +.+++|.++.+.....+.+.....++.++.|+++||+ ||||.+..+.++..++.++...
T Consensus 32 ~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 93 (390)
T PRK03545 32 LSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSAL 93 (390)
T ss_pred hHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHHH
Confidence 444 4578999999999999999999999999999999997 9999999999988888776543
No 50
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.49 E-value=1.5e-06 Score=66.72 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
+.++...+..+............++. ..+++|.++.+...+.+.+.....++.++.|+++||+ ||||.+..+.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHH
Confidence 44444444444444444433333444 4578999999999999999999999999999999997 999999999988888
Q ss_pred HHHHHhh
Q 033188 105 VLASALE 111 (125)
Q Consensus 105 g~~l~~~ 111 (125)
+.++...
T Consensus 83 ~~~~~~~ 89 (385)
T TIGR00710 83 SSLGLAL 89 (385)
T ss_pred HHHHHHH
Confidence 8777653
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.48 E-value=1e-06 Score=67.61 Aligned_cols=76 Identities=9% Similarity=-0.040 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH-HHHHHHHHHHHh
Q 033188 34 ETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFA-TVASFLVLASAL 110 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~-~~~~~lg~~l~~ 110 (125)
.+....++......++.|+.+++|.++.+.....+.......+..|+.|+++||+ ||||.+... .+...++.++.+
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 3444566666667788899889999999999999999999999999999999997 999876554 444444544443
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.47 E-value=2.8e-06 Score=66.06 Aligned_cols=83 Identities=12% Similarity=0.000 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHH-----HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITA-----ATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a-----~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
........++...++.....+++.|. +++|.+..++ ....++......++.++.|+++||+ |||+++..+.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 93 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYV-EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHH-HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHH
Confidence 33444445556667766667788887 4588886553 5667788888899999999999997 999999999888
Q ss_pred HHHHHHHHhh
Q 033188 102 SFLVLASALE 111 (125)
Q Consensus 102 ~~lg~~l~~~ 111 (125)
..++.++...
T Consensus 94 ~~~~~~~~~~ 103 (408)
T PRK09874 94 MGIVMVLMGL 103 (408)
T ss_pred HHHHHHHHHH
Confidence 8888776643
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.46 E-value=2.3e-06 Score=64.21 Aligned_cols=78 Identities=17% Similarity=0.127 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 32 GNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 32 ~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...+.....++......+.|. +++|.++.+.....+.......++.++.|+++||+ ||||.+..+.+...++.++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHH
Confidence 444556677777777777776 56799999999999999999999999999999997 9999999999998888877654
No 54
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.44 E-value=9.4e-06 Score=62.50 Aligned_cols=84 Identities=11% Similarity=-0.001 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
..+.......+....+++...+++.|+++ .|++..++....+.......++.++.|+++||+-+||+.+..+.++..++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 34443334445567777888889999864 79999999999999999999999999999999624566777777776666
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
.+++.
T Consensus 277 ~~~~~ 281 (355)
T TIGR00896 277 LCGLL 281 (355)
T ss_pred HHHHH
Confidence 65544
No 55
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.43 E-value=7.6e-06 Score=63.07 Aligned_cols=85 Identities=16% Similarity=0.100 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSV--FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~--lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
+..+......++....--++..+.++|+.+. +|+++++++...+.+.....++..++++++||+ |++|.+.++.++.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 3444444344443334446667789999754 799999999999999999999999999999996 9999999888877
Q ss_pred HHHHHHHh
Q 033188 103 FLVLASAL 110 (125)
Q Consensus 103 ~lg~~l~~ 110 (125)
.++.++..
T Consensus 219 ~~~~~l~~ 226 (310)
T TIGR01272 219 VLLSIGAA 226 (310)
T ss_pred HHHHHHHH
Confidence 77765543
No 56
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.42 E-value=2.2e-06 Score=66.06 Aligned_cols=64 Identities=23% Similarity=0.185 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
....++...+++.|+.+++|+++.++............++.++.|+++||+ |||+.+..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~ 314 (405)
T TIGR00891 251 NLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAG 314 (405)
T ss_pred HHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHH
Confidence 344446667788999888999999999999999999999999999999996 9999988877654
No 57
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.42 E-value=7.8e-06 Score=65.04 Aligned_cols=67 Identities=10% Similarity=0.085 Sum_probs=46.7
Q ss_pred HHHHHHHhHhhcC---CCHHHHHHHHHHHH---HHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 45 LANLLIYLTSVFN---MKNITAATIINIFN---GTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 45 ~~~l~~yl~~~lg---~~~~~a~~~~~~~~---~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
..+...++.++++ .+..+.......+. ....++.+++|+++||+ ||||++..+.++..++.++.+..
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~ 113 (432)
T PRK10406 41 YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSLVIACL 113 (432)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHhhc
Confidence 4455566767764 44544333333333 33348888999999997 99999999999998888776543
No 58
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.42 E-value=4.5e-06 Score=63.39 Aligned_cols=74 Identities=15% Similarity=0.071 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 35 TFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 35 ~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
++..........+.+.|. +++|.+++++............++.+++|+++||+ |||+.+..+.+...++.++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 288 (377)
T TIGR00890 215 FLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMAAML 288 (377)
T ss_pred HHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHH
Confidence 333444444445556665 56888998888889999999999999999999996 999999998888877776654
No 59
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.42 E-value=1e-05 Score=63.74 Aligned_cols=81 Identities=10% Similarity=0.045 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 033188 28 PFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLA 107 (125)
Q Consensus 28 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~ 107 (125)
+.......+....+++...+++.|+.+ .|.+..++....+.+.....++.++.|+++||+ |||+.+..+..+..++.+
T Consensus 208 ~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~~ 285 (393)
T PRK09705 208 WTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGFC 285 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHH
Confidence 333334445567778888899999965 799999999999999999999999999999996 999999888877777766
Q ss_pred HHh
Q 033188 108 SAL 110 (125)
Q Consensus 108 l~~ 110 (125)
++.
T Consensus 286 ~~~ 288 (393)
T PRK09705 286 GFI 288 (393)
T ss_pred HHH
Confidence 543
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.41 E-value=6.5e-06 Score=65.63 Aligned_cols=82 Identities=11% Similarity=-0.017 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
+..+....+...+.+......+ ..+++++|+++.+++...+.+.....++.++.|+++||+ ||||++..+.++..+|.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 3444444444444443333333 445788999999999999999999999999999999997 99999999999999998
Q ss_pred HHHh
Q 033188 107 ASAL 110 (125)
Q Consensus 107 ~l~~ 110 (125)
++..
T Consensus 83 ~l~~ 86 (410)
T TIGR00885 83 FLFW 86 (410)
T ss_pred HHHH
Confidence 7753
No 61
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.41 E-value=3.2e-06 Score=64.07 Aligned_cols=76 Identities=14% Similarity=0.005 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 33 NETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 33 ~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
..+....+.......++.|.. +.+.++.+.+...+.......++.++.|+++||+ ||||++..+.++..++..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHH
Confidence 333444444445555666764 5788999999999999999999999999999997 999999999887766665543
No 62
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.39 E-value=8.5e-06 Score=62.66 Aligned_cols=81 Identities=16% Similarity=0.141 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFN-GTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~-~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.+......++....++...++++.|+++ +|+++.+......+.. ....++.+++|+++||+ ||||.+..++++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 4444445555678888888889999976 8999999887776655 56678899999999996 9999998888877766
Q ss_pred HHHH
Q 033188 106 LASA 109 (125)
Q Consensus 106 ~~l~ 109 (125)
..+.
T Consensus 289 ~~~~ 292 (356)
T TIGR00901 289 NAGF 292 (356)
T ss_pred HHHH
Confidence 5543
No 63
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.39 E-value=9.5e-06 Score=62.24 Aligned_cols=68 Identities=12% Similarity=0.207 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 41 AVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 41 ~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+.....+++.|+++++|.++.++.............+.+++|+++||+ |||+.+..+.+...++..+.
T Consensus 215 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~ 282 (375)
T TIGR00899 215 NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGL 282 (375)
T ss_pred HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHH
Confidence 344455678888888999999988887777777777889999999996 99999888776655554443
No 64
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.39 E-value=6.8e-06 Score=66.14 Aligned_cols=59 Identities=19% Similarity=0.131 Sum_probs=51.5
Q ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 52 LTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 52 l~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
+.+++|++..+.....+.+.....++.+++|+++||+ |||+++..+.++..++.++.+.
T Consensus 45 i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 103 (455)
T TIGR00892 45 LQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASF 103 (455)
T ss_pred HHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHH
Confidence 3478999999999999999998999999999999996 9999999998888877776543
No 65
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.38 E-value=5.4e-06 Score=64.78 Aligned_cols=84 Identities=13% Similarity=0.027 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++......+......+.....++.+ .+++|.+..+.+...+.......++.++.|+++||+ ||||++..+.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 33444444444445545555555554 578999999999999999999999999999999997 9999999999998888
Q ss_pred HHHHhh
Q 033188 106 LASALE 111 (125)
Q Consensus 106 ~~l~~~ 111 (125)
.++.+.
T Consensus 82 ~~l~~~ 87 (382)
T PRK10091 82 NAMFTL 87 (382)
T ss_pred HHHHHH
Confidence 877654
No 66
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.38 E-value=2.6e-06 Score=67.93 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=56.1
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.....++.+. +++|+++.+.+...+.+.....++.+++|+++||+ |||+++.++.++..++.++...
T Consensus 41 ~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 107 (434)
T PRK11663 41 SFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGF 107 (434)
T ss_pred hHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHH
Confidence 3334445554 67999999999999999999999999999999997 9999999999988888776643
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.37 E-value=7.2e-06 Score=63.96 Aligned_cols=81 Identities=9% Similarity=-0.032 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
..+...+....+++.....++.+. +++|.++.+.....+.+.....++.++.|+++||+ ||||.+..+.+...++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIA-ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHH
Confidence 334444455555555545555554 67899999999999999999999999999999996 9999999999888888777
Q ss_pred Hhh
Q 033188 109 ALE 111 (125)
Q Consensus 109 ~~~ 111 (125)
...
T Consensus 85 ~~~ 87 (392)
T PRK10473 85 CSL 87 (392)
T ss_pred HHH
Confidence 654
No 68
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.37 E-value=7.9e-06 Score=51.24 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 42 VGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 42 y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
....-|++.|+. +.|+++.+...+..+.-....+++|+.|+++||+ ||+|.+......
T Consensus 17 g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 17 GCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 345567778885 5899999999999999999999999999999997 998887665543
No 69
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.37 E-value=6.5e-06 Score=66.86 Aligned_cols=84 Identities=13% Similarity=-0.020 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.........++....+++...+++.|+++..|+++.+++...........++.+++|++.||+ |||+.+..+.++..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALS 338 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 334444455555666777778889999989999999999999999999999999999999997 9999999888888887
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
..++.
T Consensus 339 ~~~l~ 343 (495)
T PRK14995 339 FYGLA 343 (495)
T ss_pred HHHHH
Confidence 76654
No 70
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.36 E-value=1.3e-05 Score=63.05 Aligned_cols=69 Identities=16% Similarity=0.084 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLG 96 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~ 96 (125)
..+......++....+++...+.|.|+ +++|+++.++............++.++.|+++||+ |||+.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~ 291 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFV-AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVR 291 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHH
Confidence 344444455566777888888999998 55899999998888888899999999999999996 9988764
No 71
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.35 E-value=3.9e-06 Score=66.04 Aligned_cols=74 Identities=9% Similarity=-0.090 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
+-.++.....+|.. .+++|+|..+.++..+.+.....++.++.|+++||+ ||||++..+..+..+|.++.+..+
T Consensus 22 ~~~~~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 22 RPLLTSVGPLLPQL-RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP 95 (393)
T ss_pred chhhhccchhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc
Confidence 33344444445544 478999999999999999999999999999999997 999999999999999999876543
No 72
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.34 E-value=9.1e-06 Score=64.60 Aligned_cols=59 Identities=19% Similarity=0.103 Sum_probs=52.7
Q ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 52 LTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 52 l~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
..+++|.+..++....+++.....++.+++|+++||+ ||||++..+.++..++.++.+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~ 100 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLF 100 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999997 9999999999888888776654
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=98.34 E-value=1.7e-05 Score=63.74 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHh-HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 34 ETFEKLGAVGTLANLLIYL-TSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl-~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
.++.....++...+.+.|+ ++.+|+++.++......+.....++.+++|+++||+ ||||++..+.++..++..+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~ 343 (438)
T PRK10133 267 QFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISA 343 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555666778886 457899999999999999999999999999999996 999999888777665554443
No 74
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.32 E-value=7.8e-06 Score=64.50 Aligned_cols=74 Identities=9% Similarity=0.008 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 34 ETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
.+...++........+.. .+++|.++.+..++.+.+.....++.|++|+++||+ ||||++.++.++..++.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 12 QFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHH
Confidence 333344333333333333 578888999999999999999999999999999997 99999999998877766553
No 75
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.32 E-value=6e-06 Score=70.93 Aligned_cols=65 Identities=12% Similarity=-0.011 Sum_probs=55.7
Q ss_pred HHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 45 LANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 45 ~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
.......+.+.+|++..+.+++.+++.+...++.+++|+++||+ |||+.++++.++..++.++.+
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~a 250 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSS 250 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHH
Confidence 34445566678999999999999999999999999999999996 999999999888887776655
No 76
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.32 E-value=1.2e-05 Score=64.04 Aligned_cols=67 Identities=9% Similarity=-0.010 Sum_probs=56.5
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.....++. +.+++|.++.+..+..+.+.....++.++.|+++||+ |||+.+..+.++..++.++...
T Consensus 20 ~~~~~~p~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 86 (485)
T TIGR00711 20 IVNVAIPT-IAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGV 86 (485)
T ss_pred HHHHHHHH-HHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhC
Confidence 33333444 4578999999999999999999999999999999997 9999999999998888777653
No 77
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.30 E-value=1.3e-05 Score=62.54 Aligned_cols=67 Identities=7% Similarity=-0.009 Sum_probs=55.5
Q ss_pred HHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 44 TLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 44 ~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...+.+.|..+++|+++.+.............++.++.|+++||+ |||+.+..+.++..++.+++..
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 334456677778899999988888888889999999999999996 9999999998887777766553
No 78
>PTZ00207 hypothetical protein; Provisional
Probab=98.29 E-value=2.2e-05 Score=65.99 Aligned_cols=69 Identities=9% Similarity=-0.040 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 41 AVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 41 ~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
-|+...+. ..+.+++|++..+.+.+.++....+ .+.+++|+++||+ |||+++.++.++..+|+++.+..
T Consensus 43 ~y~fsv~s-~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 43 MYAFNLIS-GAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHH-HHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 34444333 3567889999999888887755444 4666789999996 99999999999999999988764
No 79
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.29 E-value=2.1e-06 Score=68.38 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=52.4
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
...++.+ .|+++.+.....+.+.....++.++.|+++||+ |||+.+..+.++..++..+..
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 109 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMG 109 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHh
Confidence 3455554 599999999999999999999999999999996 999999998888888776654
No 80
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.29 E-value=3.8e-06 Score=66.76 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|.....++..++...++.......+.|.+..+|.+ ...........+...++.++.++++||+ |+||++..+.++..+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 45555666666666777766667777777778876 4456666678888899999999999997 999999999999999
Q ss_pred HHHHHhhcc
Q 033188 105 VLASALEQR 113 (125)
Q Consensus 105 g~~l~~~~~ 113 (125)
+.++....+
T Consensus 303 ~~~~~~~~~ 311 (428)
T PF13347_consen 303 GFLLLFFLG 311 (428)
T ss_pred HHHHHHHHH
Confidence 888876544
No 81
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.29 E-value=2.2e-05 Score=61.62 Aligned_cols=82 Identities=11% Similarity=0.069 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccchHHHHH-HHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTAN-FGTMIGAYLCDTYFGRYNTLG-FATVASF 103 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~-~~~~l~G~laDr~lGR~~~i~-~~~~~~~ 103 (125)
..+..+...+....+.......++.|+.+++|.|+.+.+...+......+ +.++++|+ +||+ ||||.+. .+.+...
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 44444445667777777777888999999999999999998776655555 45555666 9997 9998754 4444444
Q ss_pred HHHHHH
Q 033188 104 LVLASA 109 (125)
Q Consensus 104 lg~~l~ 109 (125)
++..+.
T Consensus 94 ~~~~~~ 99 (393)
T PRK15011 94 LACTLF 99 (393)
T ss_pred HHHHHH
Confidence 444443
No 82
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.28 E-value=1.5e-05 Score=64.75 Aligned_cols=67 Identities=13% Similarity=-0.088 Sum_probs=57.2
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.+..-+|.. .+++|.+..+..++.+.+......+.+++|+++||+ |||+++..+.++..++.++.+.
T Consensus 24 iv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~ 90 (495)
T PRK14995 24 VLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAF 90 (495)
T ss_pred HHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 344445555 478999999999999999999999999999999997 9999999999999888877654
No 83
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.28 E-value=1.1e-05 Score=63.00 Aligned_cols=71 Identities=11% Similarity=0.181 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
....+....+++.|+.+..|+++.++....+.......++.++.|+++||+ |+|+.+..+.++..++.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 212 NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHH
Confidence 344445556677788777899999999999999999999999999999996 99999998888777776554
No 84
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.25 E-value=2.3e-05 Score=60.23 Aligned_cols=74 Identities=7% Similarity=0.029 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 36 FEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 36 ~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
.....++....+.+.|+.+++|.++.+.............++.+++|+++||+ |||+.+..+.++..++.+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (385)
T TIGR00710 217 ASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLE 290 (385)
T ss_pred HHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 33445556666778888888999999999998888999999999999999996 999999888777666655543
No 85
>PRK09952 shikimate transporter; Provisional
Probab=98.25 E-value=2.4e-05 Score=62.57 Aligned_cols=90 Identities=10% Similarity=-0.054 Sum_probs=52.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc--CCCHHHHHHHH----HHHHHHHHHHHHHHHHhhhhccchHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVF--NMKNITAATII----NIFNGTANFGTMIGAYLCDTYFGRYNTL 95 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l--g~~~~~a~~~~----~~~~~~~~~~~~l~G~laDr~lGR~~~i 95 (125)
.++|.........+.+.+-........+.+..+++ +.++.+..... .+......++.++.|+++||+ |||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 44454444444444443333333222333444444 56666443322 122233456677789999997 999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 033188 96 GFATVASFLVLASALEQ 112 (125)
Q Consensus 96 ~~~~~~~~lg~~l~~~~ 112 (125)
..+.++..++.++.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~ 114 (438)
T PRK09952 98 MLTVWMMGIATALIGLL 114 (438)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999988887776544
No 86
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.24 E-value=2.6e-05 Score=59.20 Aligned_cols=67 Identities=15% Similarity=0.084 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
..+......++....++....+++.|+.+.+|.++.++............++.+++|+++||+ |||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 282 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRG 282 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcc
Confidence 344455555666677777888899999888999999999999999999999999999999996 9986
No 87
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.23 E-value=6.7e-06 Score=62.47 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=55.2
Q ss_pred HHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 49 LIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 49 ~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
..++.+++|+++.+...+.+.......++.+++|+++||+ |||+++..+.++..++.++.+.
T Consensus 18 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 18 MPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred hHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHH
Confidence 3466788999999999999999999999999999999997 9999999999988888777653
No 88
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.23 E-value=3.5e-05 Score=57.75 Aligned_cols=77 Identities=23% Similarity=0.330 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH-HHHHHHHHHHHHHHHHhh
Q 033188 34 ETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN-TLGFATVASFLVLASALE 111 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~-~i~~~~~~~~lg~~l~~~ 111 (125)
.++....+.....+.+.|..+.+|.++.+.............++.++.|+++||+ |||+ .+..+.++..++......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHH
Confidence 3444555556666778888777799999999999999999999999999999997 9999 999998888888777654
No 89
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.21 E-value=3.4e-05 Score=61.54 Aligned_cols=74 Identities=11% Similarity=0.045 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccch-HHHHHHHHHHHHHHHHH
Q 033188 34 ETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGR-YNTLGFATVASFLVLAS 108 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR-~~~i~~~~~~~~lg~~l 108 (125)
.+....++-....+++.|+.+++|++..+...+.+.+.....++++++|+++||+ || |+++..+.+...++..+
T Consensus 11 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 11 SFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 3333444445557788999889999999999999999999999999999999996 65 66777766665555444
No 90
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.21 E-value=1.2e-05 Score=64.45 Aligned_cols=89 Identities=17% Similarity=0.130 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
+.++..+.+.++...++|...+|+..|+++..|+|.++.+.+...+.+...++..++|+++|| +.|+++.....+..+
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 456667777778888889999999999999999999999999999999999999999999999 788988888777777
Q ss_pred HHHHHhhcccc
Q 033188 105 VLASALEQRVS 115 (125)
Q Consensus 105 g~~l~~~~~~~ 115 (125)
..+.+...+++
T Consensus 289 ~~l~l~~~~~~ 299 (394)
T COG2814 289 ALLALTFTGAS 299 (394)
T ss_pred HHHHHHHhcch
Confidence 77776655544
No 91
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.21 E-value=2e-05 Score=59.49 Aligned_cols=80 Identities=21% Similarity=0.229 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhcCCC-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 30 IIGNETFEKLGAVGTLANLLIYLTSVFNMK-NITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 30 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~-~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
.+...+.....++....+++.|+.+.+|++ ..++............++.++.|+++||+ |+++.+........++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 333444445566678888899988999999 78889889999999999999999999996 9988888877777766666
Q ss_pred Hh
Q 033188 109 AL 110 (125)
Q Consensus 109 ~~ 110 (125)
+.
T Consensus 290 ~~ 291 (352)
T PF07690_consen 290 LL 291 (352)
T ss_dssp HC
T ss_pred HH
Confidence 54
No 92
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.21 E-value=2e-05 Score=63.72 Aligned_cols=86 Identities=20% Similarity=0.221 Sum_probs=65.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-chHHHHHH-HHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYF-GRYNTLGF-ATVAS 102 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~l-GR~~~i~~-~~~~~ 102 (125)
|.+|.+....+.--+.=|++....|+|+.+..|+|..++....+.+=..+..+++++||+|||+. |||....+ +.++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 34555544444445555678888899999999999999999999999999999999999999998 77765443 33444
Q ss_pred HHHHHHHh
Q 033188 103 FLVLASAL 110 (125)
Q Consensus 103 ~lg~~l~~ 110 (125)
+++.+...
T Consensus 332 ~~~~~~~w 339 (448)
T COG2271 332 TASLVLYW 339 (448)
T ss_pred HHHHHHHH
Confidence 55544443
No 93
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.20 E-value=1.7e-05 Score=63.27 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=49.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 56 FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 56 lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
++.++.+.....+.+.....++++++|+++||+ ||||++..+.++..++.++.+
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~ 103 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSA 103 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHH
Confidence 388899999999999999999999999999997 999999999999888876654
No 94
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.20 E-value=1.2e-05 Score=67.64 Aligned_cols=63 Identities=11% Similarity=0.079 Sum_probs=51.8
Q ss_pred HHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 46 ANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 46 ~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
+....+..+.+|-++. ..++.+.......+..|+.|.+||.+ |||..++.+.++.++|.++.+
T Consensus 64 a~~l~~I~~diG~~~~-~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 64 ASILPYINADIGGSDN-WSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHhcCCCcc-chHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhh
Confidence 3445677788886654 45566778888889999999999996 999999999999999998875
No 95
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.19 E-value=1.1e-05 Score=63.11 Aligned_cols=97 Identities=8% Similarity=0.024 Sum_probs=74.2
Q ss_pred CCCCccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 14 HDEPKINYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
.++...+.++.++.|.+..+-++..+..+-..+.-+.|.++.+|+|++++..+.+.....+...+|+.|.++|++ ||+-
T Consensus 253 ~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~ 331 (459)
T KOG4686|consen 253 EPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNL 331 (459)
T ss_pred CcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-ccee
Confidence 334445667777888776655554444444445557899999999999999999999999999999999999997 9998
Q ss_pred HHHHHH-HHHHHHHHHHhh
Q 033188 94 TLGFAT-VASFLVLASALE 111 (125)
Q Consensus 94 ~i~~~~-~~~~lg~~l~~~ 111 (125)
..+.+. +...+||..++.
T Consensus 332 ~wv~~a~~~tl~~H~~l~F 350 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFF 350 (459)
T ss_pred hhHHHHHHHHHHHhhhHHh
Confidence 765554 566778887764
No 96
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.17 E-value=3.7e-05 Score=60.02 Aligned_cols=73 Identities=16% Similarity=0.062 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 35 TFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 35 ~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
++....++....+++.|+. ..|+++.++............++.++.|+++||+ |||+.+..+.+...++..++
T Consensus 230 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 230 FFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 3334556666677888885 4799999999999999999999999999999996 99999888766665555544
No 97
>TIGR00895 2A0115 benzoate transport.
Probab=98.17 E-value=4e-05 Score=58.72 Aligned_cols=78 Identities=18% Similarity=0.054 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
.......+....++....+++ +..+.+|+++.++............++.+++|+++||+ |||+.+....+....+.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 331 (398)
T TIGR00895 254 LLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFAVLV 331 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHHH
Confidence 333444455666677767777 55578899999999999999999999999999999996 9996655554444444333
No 98
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.16 E-value=2.9e-05 Score=62.28 Aligned_cols=64 Identities=22% Similarity=0.228 Sum_probs=54.8
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLA 107 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~ 107 (125)
....+++.|+++.+|++..++....+.......++.+++|+++||+ |||+++..+.++..++.+
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 356 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLII 356 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHH
Confidence 4556789999888999999999999999999999999999999996 999998887765555443
No 99
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.15 E-value=8.8e-05 Score=58.04 Aligned_cols=84 Identities=8% Similarity=-0.096 Sum_probs=67.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|..+......++....++...++.+.|++ ++|.++.+.+...........+..++.+++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 33444444444555666677778899985 5899999999888888888888899999999997 999999999999988
Q ss_pred HHHHHh
Q 033188 105 VLASAL 110 (125)
Q Consensus 105 g~~l~~ 110 (125)
+.++.+
T Consensus 283 ~~~~~~ 288 (382)
T TIGR00902 283 RWAIIG 288 (382)
T ss_pred HHHHHH
Confidence 877765
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.15 E-value=2.4e-05 Score=64.19 Aligned_cols=77 Identities=16% Similarity=0.054 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh----hccchHHHHHHH-HHHHHHHH
Q 033188 32 GNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCD----TYFGRYNTLGFA-TVASFLVL 106 (125)
Q Consensus 32 ~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laD----r~lGR~~~i~~~-~~~~~lg~ 106 (125)
.+.+.-.+++-....+++.|+ +++|.++.....+..+......+..|+.|++|| |+ ||||.++.+ .+...++.
T Consensus 11 ~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~~~~~l 88 (477)
T TIGR01301 11 SVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAALVAFAV 88 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHHHHHHH
Confidence 334444555555556666665 789999999999999999999999999999999 56 999998775 55555665
Q ss_pred HHHh
Q 033188 107 ASAL 110 (125)
Q Consensus 107 ~l~~ 110 (125)
.++.
T Consensus 89 ~ll~ 92 (477)
T TIGR01301 89 ILIG 92 (477)
T ss_pred HHHH
Confidence 5554
No 101
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.15 E-value=9.4e-06 Score=63.89 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---cchHH-HHHHHHHHHHHHHHHHhh
Q 033188 37 EKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY---FGRYN-TLGFATVASFLVLASALE 111 (125)
Q Consensus 37 ~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~---lGR~~-~i~~~~~~~~lg~~l~~~ 111 (125)
....+..+..+++.|+++++|+++.+++.+.++......+..|+.|+++||. +|||| .+..+.+...++.+++..
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 11 NNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh
Confidence 3455556777888999999999999999999999999999999999999983 38866 566777777777666654
No 102
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.13 E-value=1.3e-05 Score=60.84 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=54.8
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...++.+++|.++.+...+.+.+.....++.++.|+++||+ |||+++..+.++..++.++.+.
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~ 78 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAF 78 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHH
Confidence 33446688999999999999999999999999999999997 9999999999888877776643
No 103
>PRK10504 putative transporter; Provisional
Probab=98.13 E-value=5.8e-05 Score=60.29 Aligned_cols=84 Identities=11% Similarity=-0.006 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
+...+...++...++.......+.|++..+|.++.++...............++.|+++||+ |||+++..+.+...++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 33444444455555555555677788777899999998888888787888889999999997 99999998888777766
Q ss_pred HHHhh
Q 033188 107 ASALE 111 (125)
Q Consensus 107 ~l~~~ 111 (125)
.++..
T Consensus 342 ~~~~~ 346 (471)
T PRK10504 342 LLFML 346 (471)
T ss_pred HHHHh
Confidence 55543
No 104
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.13 E-value=7.6e-05 Score=58.53 Aligned_cols=72 Identities=14% Similarity=-0.038 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
...++......+.|+.+.+|+++.+.............++.++.|+++||+ |||+.+..+.+...+|..+..
T Consensus 228 ~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~ 299 (406)
T PRK15402 228 SLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAA 299 (406)
T ss_pred HHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 444455556678888888999998887776666677788899999999996 999999998887777776654
No 105
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.12 E-value=6.1e-05 Score=58.09 Aligned_cols=64 Identities=14% Similarity=0.054 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHH
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASF 103 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~ 103 (125)
..++....+.+.+..++.|++++++............++.+++|+++||+ |||+++..+.+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~ 271 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQF 271 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 33444444456677778899999999999999999999999999999996 99999888776543
No 106
>PRK03545 putative arabinose transporter; Provisional
Probab=98.11 E-value=5.2e-05 Score=59.26 Aligned_cols=73 Identities=12% Similarity=0.100 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 32 GNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 32 ~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
...++....+++...+++.|+.+..|++..++............++.++.|+++||+ |||+.+ .+.....++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 212 LLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 333444555566667778888778899999999999999999999999999999996 988654 4444333343
No 107
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.10 E-value=8.3e-05 Score=58.01 Aligned_cols=69 Identities=14% Similarity=0.167 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
..+.....+++.|.++ .|.++.++............++.++.|+++||+ |||+.+..+.....++.+.+
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHH
Confidence 3444455678888854 689999888888888888899999999999997 99999988877776665544
No 108
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.07 E-value=6.5e-05 Score=60.88 Aligned_cols=70 Identities=17% Similarity=0.088 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhhcCCCHHHH-HH-----HHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 033188 43 GTLANLLIYLTSVFNMKNITA-AT-----IINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a-~~-----~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
.+..+...++.+.++.+.+.. .. ..++......++.++.|+++||+ |||+++.++.++..++.++.+..+
T Consensus 33 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~ 108 (490)
T PRK10642 33 GVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIP 108 (490)
T ss_pred HHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhcc
Confidence 344455566666665333211 11 13455566778999999999997 999999999999998888776543
No 109
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.06 E-value=7.1e-05 Score=59.42 Aligned_cols=80 Identities=11% Similarity=-0.099 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHH-HHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSV-FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNT-LGFATVASF 103 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~-i~~~~~~~~ 103 (125)
..+......++....++++..++|.|+++. .+.+..++............++.+++|+++||+ |||+. +....+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 344455555666778888889999999762 467888888888888999999999999999996 87764 433433433
Q ss_pred HHH
Q 033188 104 LVL 106 (125)
Q Consensus 104 lg~ 106 (125)
++.
T Consensus 322 ~~~ 324 (412)
T TIGR02332 322 AGW 324 (412)
T ss_pred HHH
Confidence 433
No 110
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.05 E-value=7.1e-05 Score=59.96 Aligned_cols=63 Identities=17% Similarity=0.151 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~ 88 (125)
.++.......+....+|+...++|.|+++..|++..++............++.+++|+++||+
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~ 316 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV 316 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555666778888999999888999999988888888888888999999999995
No 111
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.05 E-value=2.6e-05 Score=60.13 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=55.2
Q ss_pred HHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 46 ANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 46 ~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
..++.+. +++|+++.+.....+.+.....++.+++|+++||+ |||+++..+.++..++..+...
T Consensus 12 p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 12 PALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred ccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHH
Confidence 4455665 56899999999999999999999999999999997 9999999999888888777653
No 112
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.04 E-value=0.00013 Score=56.93 Aligned_cols=82 Identities=6% Similarity=-0.085 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
.+......+.....+....++++.|+. +.|+++.+.+....+.........++.|++.||+ |+|+.+..+.+...++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 333333334444555566677888884 5899998888888877778888889999999997 99999999988888877
Q ss_pred HHHh
Q 033188 107 ASAL 110 (125)
Q Consensus 107 ~l~~ 110 (125)
+++.
T Consensus 285 ~~~~ 288 (382)
T PRK11128 285 GLMG 288 (382)
T ss_pred HHHH
Confidence 6654
No 113
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.04 E-value=1e-05 Score=62.33 Aligned_cols=59 Identities=8% Similarity=0.017 Sum_probs=52.4
Q ss_pred HHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 50 IYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 50 ~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
..+.+++|+++++.....+.......++.++.|+++||+ ||||++..+.+...++.++.
T Consensus 24 p~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~ 82 (355)
T TIGR00896 24 PQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR 82 (355)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH
Confidence 345578999999999999999999999999999999997 99999999988877776654
No 114
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.04 E-value=0.0001 Score=59.75 Aligned_cols=54 Identities=22% Similarity=0.169 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRY 92 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~ 92 (125)
....++...+++.|+.+++|+++.++....+...++..++.+++|+++||+ |||
T Consensus 265 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r 318 (476)
T PLN00028 265 FGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARR 318 (476)
T ss_pred HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHh
Confidence 334455666788998888999999999999999999999999999999996 876
No 115
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.03 E-value=6.3e-05 Score=66.11 Aligned_cols=82 Identities=7% Similarity=0.083 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHH--HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNIT--AATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASF 103 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~--a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~ 103 (125)
.....+...++..+...+....+..++.+.++.+.+. .+.+.+++.....++++++|+++||+ |||+++.++.++..
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 3333334444444444444444555555555554433 46777888888999999999999997 99999998876655
Q ss_pred HHHHH
Q 033188 104 LVLAS 108 (125)
Q Consensus 104 lg~~l 108 (125)
++.++
T Consensus 89 ~~~~~ 93 (1146)
T PRK08633 89 GLTLL 93 (1146)
T ss_pred HHHHH
Confidence 55444
No 116
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.03 E-value=0.00012 Score=59.66 Aligned_cols=70 Identities=11% Similarity=0.083 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHH-HHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 35 TFEKLGAVGTLANLLIYLTSVFNMKNITAATII-NIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 35 ~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~-~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
+......+......+.|+.+++|+++++..... ........++.+++|+++||+ ||||.+..+.++..++
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344455555556677888778999999998887 455678889999999999996 9999887766544443
No 117
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.03 E-value=6.5e-05 Score=59.89 Aligned_cols=66 Identities=18% Similarity=0.140 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
.+.......+....+|++..+.|.|+++..|+++.++............++.+++|+++||+ |+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~ 318 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGN 318 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCc
Confidence 33333444455566678888999999888899999999988888889999999999999996 7544
No 118
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.02 E-value=5.4e-05 Score=59.77 Aligned_cols=72 Identities=8% Similarity=-0.059 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhHhhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 39 LGAVGTLANLLIYLTSVF---NMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~l---g~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
..+......++.|+.+.+ +.+..+.+.+.++......++.+++|+++||+ |||+.+..+.++..++..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHh
Confidence 333344445677765543 55666667777878888889999999999996 9999998888887777666543
No 119
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.02 E-value=0.00017 Score=54.61 Aligned_cols=84 Identities=11% Similarity=0.006 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTL-ANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~-~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
.++......+.....+++.. ...+.|.++.+|.++.+.............++.++.|+++||+ ||++.+..+.+...+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 34444444444455555555 5677887777999999999999999999999999999999996 999998887766666
Q ss_pred HHHHHh
Q 033188 105 VLASAL 110 (125)
Q Consensus 105 g~~l~~ 110 (125)
+..+..
T Consensus 290 ~~~~~~ 295 (365)
T TIGR00900 290 AILVVG 295 (365)
T ss_pred HHHHHH
Confidence 555543
No 120
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.02 E-value=5.9e-05 Score=59.46 Aligned_cols=56 Identities=7% Similarity=-0.143 Sum_probs=46.2
Q ss_pred HHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 50 IYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 50 ~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
..+.+++|+++++.....+.+.....++.++.|+++||+ |||+++..+......+.
T Consensus 15 p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~ 70 (368)
T TIGR00903 15 SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAA 70 (368)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHH
Confidence 344578999999999999999999999999999999997 99998766655544443
No 121
>PRK15075 citrate-proton symporter; Provisional
Probab=98.01 E-value=0.00015 Score=57.78 Aligned_cols=67 Identities=9% Similarity=-0.077 Sum_probs=45.9
Q ss_pred HHHHHHhHhhcCCCHHHH-HHHHHHHHHH-H----HHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 033188 46 ANLLIYLTSVFNMKNITA-ATIINIFNGT-A----NFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 46 ~~l~~yl~~~lg~~~~~a-~~~~~~~~~~-~----~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
.+....+.++++.++.+. ....+..... . .+++++.|+++||+ ||||.+..+.++..++.++.+..+
T Consensus 35 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~l~~~~~ 107 (434)
T PRK15075 35 GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVTLSIMASGTLLIAFVP 107 (434)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHHHHHHHHHHHHHHhCC
Confidence 344445667788766653 3333222222 1 35678899999997 999999999999988888876543
No 122
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.01 E-value=2.8e-05 Score=62.82 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh----hccchHH-HHHHHHHHHHHHHHHHh
Q 033188 36 FEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCD----TYFGRYN-TLGFATVASFLVLASAL 110 (125)
Q Consensus 36 ~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laD----r~lGR~~-~i~~~~~~~~lg~~l~~ 110 (125)
..++.+..+..+++.|+++.+|+++...+.+..+..+...+..|+.|+++| |+ |||| -+.++.+...++..++.
T Consensus 17 ~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~~llf 95 (473)
T PRK10429 17 GKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVLFLLF 95 (473)
T ss_pred HHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHHHHHH
Confidence 345666677788999999999999999999999999999999999999999 65 9955 56677777777766664
Q ss_pred h
Q 033188 111 E 111 (125)
Q Consensus 111 ~ 111 (125)
.
T Consensus 96 ~ 96 (473)
T PRK10429 96 S 96 (473)
T ss_pred c
Confidence 3
No 123
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.00 E-value=0.00015 Score=57.00 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 42 VGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 42 y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+.+..+++.|+.+ .|.++.+.....+.......++.+++|+++||+ |||+.+..+.++..++.+++
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~ 313 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPL 313 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHH
Confidence 3456678888865 699999988888888889999999999999996 99999988887666555444
No 124
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.99 E-value=2.8e-05 Score=61.32 Aligned_cols=74 Identities=15% Similarity=0.176 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 34 ETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
.+....+.......++.+. ++++.++.+.+.+.+.......++.++.|+++||+ ||||.+..+.++..++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 3344444444445566665 56677999999999999999999999999999997 99999888877666665543
No 125
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.96 E-value=0.00014 Score=56.90 Aligned_cols=74 Identities=15% Similarity=0.057 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNG-TANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~-~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
.+......++...+......+.+.|+.+ .|+++++.......... ...++.+++|+++||+ |+||.+..+.++.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~ 284 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLA 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHH
Confidence 3333334444555555666677788854 79999999888777664 4556688999999996 9999988877654
No 126
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.94 E-value=8.4e-05 Score=57.99 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=51.8
Q ss_pred HHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 44 TLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 44 ~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
...+.+.+. +..|++..++............++.+++|+++||+ |||+.+..+.++..++..++.
T Consensus 303 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 303 IMYYSPTIF-ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred hHHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 333444444 67799998888888888889999999999999996 999999988877777766654
No 127
>PRK09848 glucuronide transporter; Provisional
Probab=97.93 E-value=4.6e-05 Score=60.83 Aligned_cols=85 Identities=9% Similarity=-0.006 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.+.......++....++......+.|+++.+|.++..+............++.++.++++||+ |+|+++.++.++..+|
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCG 307 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 344444444555566666655666777777887776665544444556677899999999996 9999999999888888
Q ss_pred HHHHhh
Q 033188 106 LASALE 111 (125)
Q Consensus 106 ~~l~~~ 111 (125)
.+++..
T Consensus 308 ~~~~~~ 313 (448)
T PRK09848 308 YLLFFW 313 (448)
T ss_pred HHHHHH
Confidence 777654
No 128
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.93 E-value=0.00021 Score=56.90 Aligned_cols=61 Identities=10% Similarity=0.131 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 033188 28 PFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 28 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~ 88 (125)
+............++++..+++.|+.+++|++..++....+.+.....++.+++|+++||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 246 WLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 3333333444555667777889999888999999999999999999999999999999996
No 129
>PRK09848 glucuronide transporter; Provisional
Probab=97.92 E-value=5.8e-05 Score=60.25 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---cchHHHH-HHHHHHHHHHHHH
Q 033188 36 FEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY---FGRYNTL-GFATVASFLVLAS 108 (125)
Q Consensus 36 ~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~---lGR~~~i-~~~~~~~~lg~~l 108 (125)
..+..+.....+++.|+++.+|++..+++.+.........+..|+.|+++||. +||||.. .++.+...+...+
T Consensus 19 ~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 19 ANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred HhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 34556656667788899999999999999999999999999999999999994 3778754 5555544443333
No 130
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.92 E-value=0.00018 Score=58.45 Aligned_cols=54 Identities=13% Similarity=0.161 Sum_probs=45.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 57 NMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 57 g~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
+.+..+...+.+.+.....++.+++|+++||+ |||+++.++.++..++.++.+.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~ 105 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGL 105 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 34566667888889999999999999999997 9999999999888888776654
No 131
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.90 E-value=0.00025 Score=56.70 Aligned_cols=67 Identities=10% Similarity=-0.092 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRY 92 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~ 92 (125)
+.++......++....++....++|.|+.+.+|++..++............++.+++|+++||+ ++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~ 327 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSS 327 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHc
Confidence 3455556666677778888888999999999999999999998888999999999999999996 654
No 132
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.90 E-value=0.0001 Score=57.97 Aligned_cols=85 Identities=13% Similarity=0.014 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|.++..+...++....++......+.|.+..++ ++.+.............++.++.++++||+ |||+++..+.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 344444445555555665554444555544556 455566666777888889999999999996 999999999888888
Q ss_pred HHHHHhh
Q 033188 105 VLASALE 111 (125)
Q Consensus 105 g~~l~~~ 111 (125)
+.++...
T Consensus 300 ~~~~~~~ 306 (437)
T TIGR00792 300 GYLIFFF 306 (437)
T ss_pred HHHHHHH
Confidence 7766644
No 133
>PRK09669 putative symporter YagG; Provisional
Probab=97.90 E-value=4.3e-05 Score=61.01 Aligned_cols=80 Identities=16% Similarity=0.171 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh----ccchHHH-HHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDT----YFGRYNT-LGFATVASF 103 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr----~lGR~~~-i~~~~~~~~ 103 (125)
+.++- +..+..+..+..+++.|+++.+|+++..++.+..+......+..|+.|+++|| + ||||. +.++.+...
T Consensus 14 yg~g~-~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~ 91 (444)
T PRK09669 14 YGLGD-TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFG 91 (444)
T ss_pred hcchh-hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHH
Confidence 44433 34455556677888999999999999999999999999999999999999999 5 88555 556666666
Q ss_pred HHHHHHh
Q 033188 104 LVLASAL 110 (125)
Q Consensus 104 lg~~l~~ 110 (125)
+...++.
T Consensus 92 i~~~l~f 98 (444)
T PRK09669 92 VVCLLTF 98 (444)
T ss_pred HHHHHHH
Confidence 6655543
No 134
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.88 E-value=0.00016 Score=61.01 Aligned_cols=82 Identities=21% Similarity=0.306 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccc--hHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNG-TANFGTMIGAYLCDTYFG--RYNTLGFATVAS 102 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~-~~~~~~~l~G~laDr~lG--R~~~i~~~~~~~ 102 (125)
.++......++....+++...++|.|+++++|+++.++........+ ...++.+++|+++||+ + .|+.+.++.+..
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHH
Confidence 34445566677788888999999999999999999999988877665 5678899999999996 7 567888888777
Q ss_pred HHHHHH
Q 033188 103 FLVLAS 108 (125)
Q Consensus 103 ~lg~~l 108 (125)
+++.++
T Consensus 410 ~~~~~~ 415 (633)
T TIGR00805 410 TLSYLL 415 (633)
T ss_pred HHHHHH
Confidence 777655
No 135
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.87 E-value=0.00016 Score=54.85 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
++......+......++...+.+.|+.+.+|+++.++............++.+++|+++||..+||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 284 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR 284 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc
Confidence 3334344444455556677788999988899999999999999999999999999999998534444
No 136
>TIGR00898 2A0119 cation transport protein.
Probab=97.84 E-value=4e-05 Score=61.76 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=51.7
Q ss_pred hHhhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 52 LTSVFNMK---NITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 52 l~~~lg~~---~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
+.++++++ +.+.....+++.....++.++.|+++||+ |||+++.++.++..++.++.+.
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~ 176 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAF 176 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHH
Confidence 34678888 88899999999999999999999999996 9999999999888888776653
No 137
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.83 E-value=7e-05 Score=60.84 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHhHhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHH
Q 033188 36 FEKLGAVGTLANLLIYLTSVFNMKNITAAT------------IINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASF 103 (125)
Q Consensus 36 ~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~------------~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~ 103 (125)
+..+.+|++..+.|+++ +..|++..++.. ...+.......+.+++++++||+ |||+++..+.++..
T Consensus 299 ~~~~~~y~~~~~~p~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~~ 376 (502)
T TIGR00887 299 LLDIAFYGVNLNQKVIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFILT 376 (502)
T ss_pred HHHHHHHccccccHHHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHHHH
Confidence 34567788877788887 466776543211 12233334445678889999996 99999888876665
Q ss_pred HHHHHH
Q 033188 104 LVLASA 109 (125)
Q Consensus 104 lg~~l~ 109 (125)
++..++
T Consensus 377 ~~~~~l 382 (502)
T TIGR00887 377 VLFFVL 382 (502)
T ss_pred HHHHHH
Confidence 554444
No 138
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.83 E-value=0.00022 Score=58.36 Aligned_cols=50 Identities=24% Similarity=0.222 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 62 TAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 62 ~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
+.+++.+.....+.++.+++|.++|++ |||+++..+.+.+.+|.++.+..
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a 139 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA 139 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh
Confidence 347999999999999999999999997 99999999999999999998643
No 139
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.83 E-value=0.00029 Score=55.92 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=49.4
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
++.|+++++-........+.+.++.++.|.++||+ ||||..+..++++.++.+..
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k 116 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTK 116 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999997 99999999999998876543
No 140
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.82 E-value=0.00052 Score=56.31 Aligned_cols=77 Identities=17% Similarity=0.152 Sum_probs=62.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchH--HHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRY--NTLGFATVAS 102 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~--~~i~~~~~~~ 102 (125)
|.+..-+...++.+-+..++.+....|.++++|++..+......+.++.+..++.++|++.||+ |.| +++..+.++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHH
Confidence 3343333334444566667777788999999999999999999999999999999999999996 999 8888877655
No 141
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.79 E-value=9.8e-05 Score=59.68 Aligned_cols=83 Identities=10% Similarity=0.024 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|.++..+...+......+....+.+.|.+..++ ++........+..+...++.++.++++||+ |+|+++.++.++..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 566666666666666666666666555544444 455555566666677888889999999997 999999888877665
Q ss_pred HHHHH
Q 033188 105 VLASA 109 (125)
Q Consensus 105 g~~l~ 109 (125)
+.+..
T Consensus 309 ~~~~~ 313 (473)
T PRK10429 309 SCGVL 313 (473)
T ss_pred HHHHH
Confidence 55543
No 142
>PRK12382 putative transporter; Provisional
Probab=97.75 E-value=0.00031 Score=54.77 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...+..+..+.+.|+.+ .|+++ +......+.....++.++.|+++||+ ||||.+..+..+..++.+++..
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 229 GVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWL 298 (392)
T ss_pred HHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHH
Confidence 45555666677777754 45554 34455566666778899999999996 9999999988888887776654
No 143
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.75 E-value=0.00033 Score=54.44 Aligned_cols=71 Identities=17% Similarity=0.073 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHHH---HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNIT---AATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~~---a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
........+++.|..+..+..... ......+......+..++.|+++||+ |||+.+..+.+...++.++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 233 VATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHH
Confidence 333345556677776544422222 23334455566678888999999996 999999988887776665543
No 144
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.75 E-value=0.00039 Score=55.41 Aligned_cols=63 Identities=11% Similarity=-0.065 Sum_probs=50.4
Q ss_pred HHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 46 ANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 46 ~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
.+.+.+. +..|.+...+............++.+++|+++||+ |||+.+..+.+...++.++++
T Consensus 292 ~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~ 354 (479)
T PRK10077 292 YYAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLG 354 (479)
T ss_pred HHHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHH
Confidence 3344443 56788887777777777778889999999999996 999999999998888877764
No 145
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.74 E-value=0.0003 Score=56.87 Aligned_cols=72 Identities=15% Similarity=0.004 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFA 98 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~ 98 (125)
..+..-...+...+.+-....+++.|++++.|++..+.+.+.++......+..|+.|.++||. |.||-+++.
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~ 79 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWF 79 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHH
Confidence 334333334344444445667888999888999999999999999999999999999999996 977765443
No 146
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.74 E-value=0.00055 Score=53.38 Aligned_cols=71 Identities=13% Similarity=0.079 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 37 EKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 37 ~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
....+.....+++.|..+ .|++ ++......+.....++.++.|+++||+ ||||.+..+.++..++..++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T PRK05122 228 ASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWL 298 (399)
T ss_pred HHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 345566666777888753 4553 334455666777778889999999996 9999998888877777766543
No 147
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.74 E-value=2.2e-05 Score=66.19 Aligned_cols=89 Identities=11% Similarity=0.059 Sum_probs=68.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
+.+|.+.+...........+.+.......-+.++++++..+...+.+.+.+...+..++.|+++||+ ||+|.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 4455444444433333444445544555666778999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHhh
Q 033188 102 SFLVLASALE 111 (125)
Q Consensus 102 ~~lg~~l~~~ 111 (125)
..+|.++.+.
T Consensus 108 ~~lg~ll~al 117 (633)
T TIGR00805 108 MGLGSFLLSL 117 (633)
T ss_pred HHHHHHHHhC
Confidence 9999988753
No 148
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.73 E-value=0.00046 Score=57.02 Aligned_cols=66 Identities=18% Similarity=0.067 Sum_probs=57.5
Q ss_pred HHHHHHHHhHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 44 TLANLLIYLTSVFNMKNIT-AATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 44 ~~~~l~~yl~~~lg~~~~~-a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
...+...|+.+++|+++.+ ...+.+++.....++.+++|+++||+ |-||++..+.+...+..+++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~ 110 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLL 110 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHH
Confidence 3445667888899999999 89999999999999999999999996 999999999988777766664
No 149
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00095 Score=53.73 Aligned_cols=89 Identities=11% Similarity=-0.020 Sum_probs=67.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
.|..++......++-...-+.....++. +.+.+|.++.++...++.+.....++.|+-..++||+ -||+.++....++
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lF 88 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALF 88 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHH
Confidence 3444443333333434444444444443 3478999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHHHhhcc
Q 033188 103 FLVLASALEQR 113 (125)
Q Consensus 103 ~lg~~l~~~~~ 113 (125)
.+|.++.+..+
T Consensus 89 i~~n~l~alAp 99 (394)
T COG2814 89 IVSNLLSALAP 99 (394)
T ss_pred HHHHHHHHHhc
Confidence 99998876544
No 150
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.73 E-value=0.00083 Score=52.82 Aligned_cols=58 Identities=14% Similarity=0.135 Sum_probs=44.0
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 48 LLIYLTSVFNMKNITAATIINIFN-GTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~-~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
.+.|+.+++|+++++......... ....++.+++|+++||+ ||||.+..+.+...+..
T Consensus 232 ~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~ 290 (402)
T PRK11902 232 STTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSN 290 (402)
T ss_pred HHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 344666778999998888775544 45788899999999996 99998877766555443
No 151
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.72 E-value=0.00012 Score=60.09 Aligned_cols=54 Identities=17% Similarity=0.135 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 57 NMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 57 g~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
|++......+..+......+++++.||++|++ |||+++....++.+++.++...
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~ 133 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGL 133 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhcc
Confidence 36788889999999999999999999999996 9999999999999999876543
No 152
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.69 E-value=0.0012 Score=52.71 Aligned_cols=77 Identities=12% Similarity=-0.023 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 34 ETFEKLGAVGTLANLLIYLTSV-FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~-lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.++......+..++++.|..+. .+.+...+......+.....++-+++|+++||+ ++||.+.++++...+..++...
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~~~ 318 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGSIF 318 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444445667888888543 355556666667777788889999999999996 9999988888777776666544
No 153
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.68 E-value=0.0012 Score=51.63 Aligned_cols=54 Identities=11% Similarity=-0.115 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
..++-....+++.|+ +++|.|+.+.....+.+.....+++++.|.++||+ ||++
T Consensus 17 ~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~ 70 (382)
T TIGR00902 17 FCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHII 70 (382)
T ss_pred HHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHH
Confidence 334444556677888 57899999999999999999999999999999997 9854
No 154
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.00055 Score=56.08 Aligned_cols=66 Identities=14% Similarity=-0.021 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFG 90 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lG 90 (125)
+.+|.+....+++..+++.+..++|+|+.+.||++.++.+....+=.....+..+++|.+||+..-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456777788889999999999999999999999999999999999999999999999999999733
No 155
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.68 E-value=0.00056 Score=54.58 Aligned_cols=70 Identities=13% Similarity=-0.035 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhHhhcCCC--------HHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 40 GAVGTLANLLIYLTSVFNMK--------NITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 40 ~~y~~~~~l~~yl~~~lg~~--------~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.+.....+.+.|.. +.|.+ .+......++......++.++.|+++||+ |||+++..+.++..++..+...
T Consensus 223 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~v~~~l~~~ 300 (418)
T TIGR00889 223 PLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWALRFGFFAY 300 (418)
T ss_pred HHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHH
Confidence 33344466677774 34433 35567777888888888899999999997 9999999999988887665544
No 156
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.68 E-value=0.00071 Score=58.38 Aligned_cols=43 Identities=21% Similarity=0.085 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 67 INIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 67 ~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
..+..+....+.+++|+++||+ |||+++..+.++..++.+++.
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~ 643 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLS 643 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 3455567778899999999996 999999998888777766554
No 157
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.64 E-value=5.3e-05 Score=60.22 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh----hccchHHH-HHHHHHHHHHHHHHH
Q 033188 35 TFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCD----TYFGRYNT-LGFATVASFLVLASA 109 (125)
Q Consensus 35 ~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laD----r~lGR~~~-i~~~~~~~~lg~~l~ 109 (125)
+.....+.....++..|.++.+|+++...+.+..+..+...+.-|+.|+++| |+ ||||. +.++.+...++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 3344555566678888999999999999999999999999999999999999 86 98886 557888888888888
Q ss_pred hhc
Q 033188 110 LEQ 112 (125)
Q Consensus 110 ~~~ 112 (125)
...
T Consensus 90 f~~ 92 (428)
T PF13347_consen 90 FSP 92 (428)
T ss_pred hcc
Confidence 743
No 158
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.63 E-value=0.0015 Score=51.57 Aligned_cols=69 Identities=9% Similarity=0.090 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANL-LIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLG 96 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l-~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~ 96 (125)
.++......+.....+++...+. +.|. +++|+++.+.............++.++.|++.||. +|+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~ 286 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAG 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHH
Confidence 34433333344445555555665 4554 67899999988888888888999999999999994 5444343
No 159
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.62 E-value=0.00078 Score=51.37 Aligned_cols=37 Identities=16% Similarity=0.039 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 75 NFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 75 ~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
.++.++.|+++||+ ||||++..+.++..++.++.+..
T Consensus 49 ~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~ 85 (394)
T TIGR00883 49 PLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLL 85 (394)
T ss_pred hhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhC
Confidence 35789999999997 99999999999988887776543
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.61 E-value=0.0012 Score=51.61 Aligned_cols=73 Identities=10% Similarity=-0.047 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHhHhhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 38 KLGAVGTLANLLIYLTSVF---NMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~l---g~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...+.......+.|+.+.+ +.+.+..+...+.......++.+..|++.||+ |||+.+.++.++..++..+...
T Consensus 228 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 228 ACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHh
Confidence 3344445455677776554 44555566667777777778889999999996 9999999988887777766543
No 161
>PRK11043 putative transporter; Provisional
Probab=97.59 E-value=0.0012 Score=51.50 Aligned_cols=66 Identities=9% Similarity=-0.100 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
...++....+.+.|.+ +.|+++.+.............++..+++++.||+ |+|+.+....+...++
T Consensus 216 ~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~ 281 (401)
T PRK11043 216 SAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVS 281 (401)
T ss_pred HHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 4445555566777774 5799999888777777777788888999999996 9999776655544443
No 162
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.58 E-value=0.00068 Score=55.89 Aligned_cols=87 Identities=11% Similarity=-0.012 Sum_probs=63.4
Q ss_pred CCchhHHHHHHHHHHHHH-HHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKL-GAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~-~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
++++....++.+.++..+ +.+.+. +..+.+-...|++.+++..+......+...+++++.++-||+ |||+.++.+..
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~-~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~ 343 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIF-FYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLS 343 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHH
Confidence 344555555444444422 233333 333344466799999999999999999999999999999996 99999999998
Q ss_pred HHHHHHHHHh
Q 033188 101 ASFLVLASAL 110 (125)
Q Consensus 101 ~~~lg~~l~~ 110 (125)
...+..+++.
T Consensus 344 ~~~~~~~~~~ 353 (485)
T KOG0569|consen 344 LMAVALLLMS 353 (485)
T ss_pred HHHHHHHHHH
Confidence 8777766654
No 163
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.56 E-value=0.0015 Score=51.03 Aligned_cols=53 Identities=9% Similarity=-0.074 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRY 92 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~ 92 (125)
..++.....+++.|+ +++|.+..+.+...+.+.....++.|++|.++||+ ||+
T Consensus 17 ~~~~g~~~p~l~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~ 69 (382)
T PRK11128 17 FFAYGVFLPFWSVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQL 69 (382)
T ss_pred HHHHHHHhhhHHHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cch
Confidence 444555666778898 56899999999999999999999999999999996 983
No 164
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.0015 Score=52.71 Aligned_cols=83 Identities=14% Similarity=0.034 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
+...+....+...+..... -.+...+.+.++++..+++.+...+.....+.++..|++.+|+ |+|+.+..|..++.+|
T Consensus 14 ~~v~~t~lFfl~G~~~~l~-diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg 91 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLN-DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHHhhcc-hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 4444444444444444322 3345566788999999999999999999999999999999996 9999999999999999
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
..+..
T Consensus 92 ~~lF~ 96 (422)
T COG0738 92 AALFW 96 (422)
T ss_pred HHHHh
Confidence 99885
No 165
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.53 E-value=0.00021 Score=58.14 Aligned_cols=58 Identities=16% Similarity=0.057 Sum_probs=50.8
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
+..+.+........+++.....+++++.|++|||+ |||+++.++.++..++-++.+..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 44667888889999999999999999999999995 99999999999998887776543
No 166
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.53 E-value=0.0016 Score=51.33 Aligned_cols=70 Identities=14% Similarity=0.090 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 41 AVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 41 ~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.++...+++.|..+.+|.++.+.....+.......++.++.++++||. ++++.+..+.+...++.++...
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHc
Confidence 345666788898877999999999998888889999999999999995 8888888887777777766543
No 167
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.53 E-value=0.0026 Score=51.03 Aligned_cols=68 Identities=13% Similarity=0.085 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
...+-....+++.|+. +.|+|..+...+.++......+.+++.|+++||...+||.+.+..++..+..
T Consensus 15 f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~ 82 (400)
T PF03825_consen 15 FFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALAL 82 (400)
T ss_pred HHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHH
Confidence 3333345567888984 5689999999999999999999999999999997456777766655554443
No 168
>PRK11462 putative transporter; Provisional
Probab=97.51 E-value=0.00068 Score=54.91 Aligned_cols=76 Identities=12% Similarity=0.192 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh---ccchHHH-HHHHHHHHHHHHHHHhhc
Q 033188 37 EKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDT---YFGRYNT-LGFATVASFLVLASALEQ 112 (125)
Q Consensus 37 ~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr---~lGR~~~-i~~~~~~~~lg~~l~~~~ 112 (125)
..+.+..+..|+..|.++.+|+++..++.+..+.-+.-.+.-|+.|+++|| -+||||. +.++.+...++..++...
T Consensus 21 ~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~ 100 (460)
T PRK11462 21 SHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST 100 (460)
T ss_pred hhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC
Confidence 355666677789999999999999999999999999999999999999996 2499876 445667777777777643
No 169
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.50 E-value=0.00092 Score=54.32 Aligned_cols=82 Identities=13% Similarity=-0.031 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 28 PFIIGNETFEKLGAVGTLANL---LIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 28 ~~~~~~~~~~~~~~y~~~~~l---~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
+.++...+..-..||.+--+. ..++.++.++|+.|-..+.+.+.+..-++-.+.|.+|||. +.|+.+..+.++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 566666777788888666554 3777788889999999999999999999999999999997 999999999888777
Q ss_pred HHHHHh
Q 033188 105 VLASAL 110 (125)
Q Consensus 105 g~~l~~ 110 (125)
..++.-
T Consensus 107 ~nil~G 112 (448)
T COG2271 107 VNILFG 112 (448)
T ss_pred HHHHHh
Confidence 666553
No 170
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.49 E-value=0.0011 Score=58.50 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHH-HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNI-TAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~-~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
...+....+++.|+.+.+|++.. .+....+...+...++.+++|+++||+ ++++.+.++.++..++.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~ 317 (1146)
T PRK08633 246 FISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFLLP 317 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHHHH
Confidence 34445556788898888999998 888888888888899999999999996 999988888777766665554
No 171
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.49 E-value=0.00033 Score=56.43 Aligned_cols=52 Identities=17% Similarity=0.047 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 60 NITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 60 ~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
..-+..+.+.|.++..+.++..|-+|||+ |||+++..+++...+.+.+.+.+
T Consensus 67 ~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S 118 (451)
T KOG2615|consen 67 VFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS 118 (451)
T ss_pred chhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH
Confidence 34568888999999999999999999998 99999999999888877776543
No 172
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.48 E-value=0.00051 Score=54.96 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=48.4
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 55 VFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 55 ~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
++++++.+.+.+.+.+.....++.+++|+++||+ |||+++..+.++..++.++.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~ 123 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVI 123 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999996 99999999988777776554
No 173
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.47 E-value=0.00098 Score=54.72 Aligned_cols=88 Identities=8% Similarity=0.021 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
|+........++...++....+.+..|.+..+|.++..+.............+.++...+++|+ |+|++..++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4444444556666666666666667777777898888888888888888888899999999996 999999999999999
Q ss_pred HHHHHhhcc
Q 033188 105 VLASALEQR 113 (125)
Q Consensus 105 g~~l~~~~~ 113 (125)
+.+++...+
T Consensus 315 ~~~~~~f~~ 323 (467)
T COG2211 315 GYLLLYFTP 323 (467)
T ss_pred HHHHHHhhc
Confidence 999987655
No 174
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.42 E-value=0.00018 Score=58.89 Aligned_cols=82 Identities=12% Similarity=0.108 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 033188 28 PFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLA 107 (125)
Q Consensus 28 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~ 107 (125)
.....+...++.--|.+-. ...=.++.+|.+++......+++.....++.|++|+++||+ -|++++.+|..+..++.+
T Consensus 36 ~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHH
Confidence 3344444444444444432 22233456899999999999999999999999999999998 999999999988888777
Q ss_pred HHhh
Q 033188 108 SALE 111 (125)
Q Consensus 108 l~~~ 111 (125)
....
T Consensus 114 ~~~f 117 (493)
T KOG1330|consen 114 ASGF 117 (493)
T ss_pred HHHH
Confidence 6653
No 175
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.00053 Score=55.63 Aligned_cols=67 Identities=15% Similarity=0.116 Sum_probs=57.0
Q ss_pred HHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 42 VGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 42 y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
.++.+.-..|....+|++..+-.......+..+..+++++|++.||+ |-|+++..+.+++.+..+..
T Consensus 269 ~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~~~~~ 335 (438)
T COG2270 269 NTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIAALYL 335 (438)
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHHHHHH
Confidence 34445556898889999999999999999999999999999999996 99999999988776655443
No 176
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.0011 Score=54.82 Aligned_cols=81 Identities=16% Similarity=0.168 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTLAN---LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~~~---l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.+....+......|++..- +...+.++++-+..+.+++.++..++..+..|+.+.+.||+ |.|++++.|.++..+|
T Consensus 46 vV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 46 VVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHH
Confidence 3333343444555544322 23445577898999999999999999999999999999997 9999999999999999
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
.++.+
T Consensus 125 ~~lss 129 (509)
T KOG2504|consen 125 LLLSS 129 (509)
T ss_pred HHHHH
Confidence 88875
No 177
>PRK10054 putative transporter; Provisional
Probab=97.36 E-value=0.001 Score=52.57 Aligned_cols=77 Identities=5% Similarity=-0.084 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHh--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 34 ETFEKLGAVGTLANLLIYLTS--VFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~--~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
.++....+.......+.|... +.+.+++.................+..|.+.||+ |+|+.+..+.++..++..+...
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 293 (395)
T PRK10054 215 GFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIGLVGFIF 293 (395)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHHHHHHHH
Confidence 333334444444455556543 3444555556666666666666678889999996 9999999888888887766643
No 178
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.35 E-value=0.0057 Score=49.00 Aligned_cols=84 Identities=10% Similarity=-0.047 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
..|.+....-..+..||.+...+|.++ .+-|+|++++....+..+.......+++-++++|.--+|+.....++.+.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~il-i~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAIL-IDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHH-HHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 346666666677999999999999998 4669999999999999999999999999999998766777777777777777
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
.+-+.
T Consensus 288 ~~G~~ 292 (395)
T COG2807 288 LVGLL 292 (395)
T ss_pred HHHHH
Confidence 76654
No 179
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.34 E-value=0.0038 Score=50.30 Aligned_cols=70 Identities=13% Similarity=0.089 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cchHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY-FGRYNTLGF 97 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~-lGR~~~i~~ 97 (125)
++......+.....++....+++.|++ +.|+++.+++...+.......++.+++|+++||. .++++....
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 313 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLF 313 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHH
Confidence 444444445556667777778889985 4799999999999999999999999999999983 244443333
No 180
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.29 E-value=0.002 Score=48.83 Aligned_cols=59 Identities=17% Similarity=0.189 Sum_probs=52.8
Q ss_pred HHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 50 IYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 50 ~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
.-+.+.+|+|++|...+.+......++ .++.|.+.|++ |.+.++.+|++...+|+.++.
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~ 84 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLW 84 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999988886 58889999997 999999999999999999986
No 181
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.27 E-value=0.0017 Score=57.52 Aligned_cols=35 Identities=11% Similarity=0.047 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHH
Q 033188 62 TAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGF 97 (125)
Q Consensus 62 ~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~ 97 (125)
..+...+++.....++.+++|+++||+ |||+++..
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~ 87 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKI 87 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHH
Confidence 346666778888889999999999997 99998643
No 182
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.24 E-value=0.0051 Score=48.35 Aligned_cols=74 Identities=20% Similarity=0.072 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc----cchHH-HHHHHHHHHHHHHHHH
Q 033188 35 TFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY----FGRYN-TLGFATVASFLVLASA 109 (125)
Q Consensus 35 ~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~----lGR~~-~i~~~~~~~~lg~~l~ 109 (125)
+.....+.-...-+|.|+. +.|+|.++-......... .+..++.|+++||+ +|||| .+..+.+...++..++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHhhhHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 3445555555566889995 559999999888666665 69999999999995 17876 5777777776666665
Q ss_pred hh
Q 033188 110 LE 111 (125)
Q Consensus 110 ~~ 111 (125)
+.
T Consensus 86 ~~ 87 (402)
T PRK11902 86 AF 87 (402)
T ss_pred Hh
Confidence 54
No 183
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.21 E-value=0.0064 Score=49.25 Aligned_cols=90 Identities=8% Similarity=-0.016 Sum_probs=67.7
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH
Q 033188 19 INYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFA 98 (125)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~ 98 (125)
.++.++|.++............- .+.+-+..++.+.+|+++.|-.++..+-...+.+.=++-|++.||+ |-|++...+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW-~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s 85 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVW-TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILS 85 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHH-HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHH
Confidence 34567777776665443332222 3334556777789999999999999999999999999999999997 888888888
Q ss_pred HHHHHHHHHHHh
Q 033188 99 TVASFLVLASAL 110 (125)
Q Consensus 99 ~~~~~lg~~l~~ 110 (125)
.++..+-.+.++
T Consensus 86 ~~l~~IP~~~~~ 97 (417)
T COG2223 86 MLLLLIPCLGLA 97 (417)
T ss_pred HHHHHHHHHHHH
Confidence 877666555543
No 184
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.19 E-value=5e-05 Score=60.20 Aligned_cols=51 Identities=20% Similarity=0.191 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 033188 62 TAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 62 ~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
......+.......++.+++|+++||+ |||+++..+.++..+|.++.+..+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~ 97 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAP 97 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccc
Confidence 456778888899999999999999997 999999999999999998876554
No 185
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.18 E-value=0.0079 Score=49.12 Aligned_cols=82 Identities=17% Similarity=0.071 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc----cchHHH-HHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY----FGRYNT-LGFATV 100 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~----lGR~~~-i~~~~~ 100 (125)
.....+.+-+......+.....++.|+. +.|.|.++......+... +++.++.|+++||+ +||||. +..+.+
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 3444555555666667667777888874 558888877776333333 47899999999993 199986 556666
Q ss_pred HHHHHHHHHh
Q 033188 101 ASFLVLASAL 110 (125)
Q Consensus 101 ~~~lg~~l~~ 110 (125)
...++...++
T Consensus 90 ~~~~~~~~~a 99 (491)
T PRK11010 90 LLLVAIAAMG 99 (491)
T ss_pred HHHHHHHHHH
Confidence 6666665554
No 186
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.13 E-value=0.0082 Score=48.81 Aligned_cols=86 Identities=7% Similarity=-0.042 Sum_probs=59.1
Q ss_pred CCchhHH-HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-----hHHHH
Q 033188 22 RGWKAMP-FIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFG-----RYNTL 95 (125)
Q Consensus 22 ~~~~~~~-~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lG-----R~~~i 95 (125)
.+++..+ .+...-+.+.+. +.+...++.++.+++|+++++.....+....--.+ -++.|.++||+ + ||+.+
T Consensus 22 ~~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~-~i~G~rRr~~l 98 (468)
T TIGR00788 22 FHPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTF-PLFGYTKRWYL 98 (468)
T ss_pred CCcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhc-CCCCccchHHH
Confidence 3445444 333456677777 66666677888888999999987776555555555 55599999997 8 88888
Q ss_pred HHHHHHH-HHHHHHHh
Q 033188 96 GFATVAS-FLVLASAL 110 (125)
Q Consensus 96 ~~~~~~~-~lg~~l~~ 110 (125)
.++.++. .++...++
T Consensus 99 ~~~~~l~~~~~~~~l~ 114 (468)
T TIGR00788 99 VLSGLLGSAILYGLLP 114 (468)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 8887766 34444444
No 187
>PRK09669 putative symporter YagG; Provisional
Probab=97.07 E-value=0.0042 Score=49.59 Aligned_cols=45 Identities=16% Similarity=0.185 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHH
Q 033188 61 ITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 61 ~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~ 106 (125)
+..............++.+++++++||+ |+|+.+.++.+...++.
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 3334444555566777889999999996 99999988877655433
No 188
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.06 E-value=0.0046 Score=47.48 Aligned_cols=59 Identities=20% Similarity=0.073 Sum_probs=40.3
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc----cchHHHH-HHHHHHHHHHHHHH
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY----FGRYNTL-GFATVASFLVLASA 109 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~----lGR~~~i-~~~~~~~~lg~~l~ 109 (125)
++.+. +++|+|.++.+...+..... ...++.|+++||+ +||||.+ ..+.+...+....+
T Consensus 11 ~~~~~-~~~g~s~~~~g~~~~~~~~~--~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 11 LPYWL-RSKNVSLKTIGFFSLVGLPY--SLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHH--HHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 44454 67899999988886553222 3488999999996 4999974 55555555554444
No 189
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.06 E-value=0.0052 Score=54.56 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++..+...++....+.++.+.++.|+.+.+|.+..+++...+.+.+...++.++.|+++|+. ++++.+..+.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 304 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLF 304 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHH
Confidence 344444444444555566777889999988999999999999999999999999999999986 7766655555544444
Q ss_pred HH
Q 033188 106 LA 107 (125)
Q Consensus 106 ~~ 107 (125)
.+
T Consensus 305 ~~ 306 (1140)
T PRK06814 305 GL 306 (1140)
T ss_pred HH
Confidence 33
No 190
>PRK11462 putative transporter; Provisional
Probab=97.05 E-value=0.014 Score=47.27 Aligned_cols=76 Identities=9% Similarity=0.086 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
|.........++.........+....|.+..+|.++ ........+.+...++.+++++++||+ |+|+.+..+....
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~ 303 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALL 303 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 344444434444444444333333444433455433 334556667777788899999999996 9998876555433
No 191
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.03 E-value=0.013 Score=46.29 Aligned_cols=59 Identities=10% Similarity=-0.010 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 41 AVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 41 ~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
.......++.|+.+.+|.++.++............++.++.+++.||. ++++.+..+..
T Consensus 221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~ 279 (393)
T PRK11195 221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL 279 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH
Confidence 334444566788888999999999999999999999999999999996 99988877753
No 192
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.0033 Score=52.00 Aligned_cols=79 Identities=20% Similarity=0.139 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---cchHHHHHHHHH-HHHHHH
Q 033188 31 IGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY---FGRYNTLGFATV-ASFLVL 106 (125)
Q Consensus 31 ~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~---lGR~~~i~~~~~-~~~lg~ 106 (125)
....++.-...|+...+++.|+++..|++..++........+.+.++.+++|+++||. ..+|..+..... ...+|+
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3455566677778888999999886789999999999999999999999999999992 255555444443 444554
Q ss_pred HHH
Q 033188 107 ASA 109 (125)
Q Consensus 107 ~l~ 109 (125)
+.+
T Consensus 359 ~~l 361 (495)
T KOG2533|consen 359 ISL 361 (495)
T ss_pred HHH
Confidence 444
No 193
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.92 E-value=0.022 Score=47.43 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=43.7
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
.++.-|+...+.+......-..++.+++|.++||+ .|||.++.+-++..+..+++
T Consensus 38 ~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L 92 (524)
T PF05977_consen 38 TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLL 92 (524)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHH
Confidence 34455777778887887888889999999999997 99999999888766554444
No 194
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.76 E-value=0.012 Score=48.87 Aligned_cols=74 Identities=16% Similarity=0.080 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
.+....+...+|.+..+.+|.++..-+.+.+.+.+.+.++.++.+++.+++ ++++.+..+.+...++.+.++..
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal~ 304 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLALS 304 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhcc
Confidence 333334445678888889999999999999999999999999999999996 99999988888887777766544
No 195
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.75 E-value=0.012 Score=47.58 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
..+|..--..+--|--+.+|++..++............++-.+.|++..|-.|++++..++|....++..++...
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 444443333444677677999999999999999999999999999988865799999999999988888776543
No 196
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.71 E-value=0.0054 Score=50.22 Aligned_cols=86 Identities=19% Similarity=0.158 Sum_probs=56.3
Q ss_pred CchhHHHHHHHHHHHHHHH-HHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 23 GWKAMPFIIGNETFEKLGA-VGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~-y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
.+|.....+++..+...+- ..+..|.+..+ +..|.+... .....+......+++.++.++-||+ |||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 4444554454444443333 24444444444 455555443 5555566666777778889999996 999999999999
Q ss_pred HHHHHHHHhh
Q 033188 102 SFLVLASALE 111 (125)
Q Consensus 102 ~~lg~~l~~~ 111 (125)
..++.++++.
T Consensus 369 m~~~~~~~~~ 378 (513)
T KOG0254|consen 369 MSICLVILAV 378 (513)
T ss_pred HHHHHHHHHH
Confidence 9999888764
No 197
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.65 E-value=0.044 Score=43.56 Aligned_cols=82 Identities=12% Similarity=-0.085 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++.......+....++......|.|+++.+|+++.+.............++..+.+.+.++. +++|.+........+|
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig 297 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHH
Confidence 344443444455566666767778999888999999998877666666667666666655443 3444443333333344
Q ss_pred HHH
Q 033188 106 LAS 108 (125)
Q Consensus 106 ~~l 108 (125)
.++
T Consensus 298 ~~l 300 (413)
T PRK15403 298 LAL 300 (413)
T ss_pred HHH
Confidence 333
No 198
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.64 E-value=0.033 Score=43.48 Aligned_cols=70 Identities=7% Similarity=-0.179 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHH--HHHHHHHHHHHHHH-HHhhhhccchHHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATII--NIFNGTANFGTMIG-AYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~--~~~~~~~~~~~~l~-G~laDr~lGR~~~i~~~~~ 100 (125)
.....-+.+.+.+......++.|++ +.|.|.++-.... ........+.+|+. ++.+||+ ||||..++.+.
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~ 77 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQ 77 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHH
Confidence 3444556667777777778888984 5699999888863 44455555555555 7789995 99999766553
No 199
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.63 E-value=0.0059 Score=50.44 Aligned_cols=46 Identities=24% Similarity=0.330 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 64 ATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
+.+++++...+.+++.++|+++||+ |||.++.++.++..++.+++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~ 108 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMG 108 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHH
Confidence 6677888899999999999999997 999999999998888877764
No 200
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.59 E-value=0.02 Score=47.05 Aligned_cols=60 Identities=15% Similarity=0.107 Sum_probs=53.1
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
..+|..+.+| +.+.+.+...++..++......+-|+.|++ |-|.+..+++++-++|..+=
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir 126 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIR 126 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHh
Confidence 4467666777 788888999999999999999999999997 99999999999999998874
No 201
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.58 E-value=0.0054 Score=39.72 Aligned_cols=40 Identities=18% Similarity=0.102 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 70 FNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 70 ~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
......++.++.|+++||+ |||+.+..+.....++.++..
T Consensus 7 ~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~ 46 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFA 46 (141)
T ss_pred ehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHH
Confidence 4456677899999999996 999999998888777766654
No 202
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.55 E-value=0.025 Score=46.06 Aligned_cols=84 Identities=11% Similarity=-0.027 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc--CC---------------C--HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVF--NM---------------K--NITAATIINIFNGTANFGTMIGAYLCD 86 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l--g~---------------~--~~~a~~~~~~~~~~~~~~~~l~G~laD 86 (125)
.-.....+-+..+++|||..-..+...+... |. + ...--.-..+.+..-.=+.++.+++-|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 3445556777889999988654443332110 00 1 111111223344445556788999999
Q ss_pred hccchHHHHHHHHHHHHHHHHHHh
Q 033188 87 TYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 87 r~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
|+ |||+++..+.++..+-..++.
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~ 429 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLT 429 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHH
Confidence 95 999999999988877776654
No 203
>TIGR00898 2A0119 cation transport protein.
Probab=96.52 E-value=0.016 Score=46.72 Aligned_cols=42 Identities=21% Similarity=0.100 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 69 IFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 69 ~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
........+.+++++++||+ |||+.+.++.++..++.+++..
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~ 404 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLF 404 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHH
Confidence 44555667788899999996 9999999988877777665543
No 204
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.52 E-value=0.0071 Score=50.75 Aligned_cols=64 Identities=11% Similarity=0.187 Sum_probs=51.1
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
.+...+++|. .++|+++.+...+....=.+..+.+|++|++|||+ =++|.+.++..+..+...+
T Consensus 29 ~l~pll~vy~-kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 29 SLFPLLAVYF-KQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred ccchHHHHHH-HHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 4556677887 68999999999999999999999999999999998 5666666665554444443
No 205
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.46 E-value=0.015 Score=47.85 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---cchHHH-HHHHHHHHHHHHHHHhhcc
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY---FGRYNT-LGFATVASFLVLASALEQR 113 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~---lGR~~~-i~~~~~~~~lg~~l~~~~~ 113 (125)
+..+..+..++..|.++..|+++..++.+..+.-+.-.+.-|+.|.++||. +||+|. ++++.+-..+...++...+
T Consensus 25 ~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p 104 (467)
T COG2211 25 NFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP 104 (467)
T ss_pred HHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC
Confidence 456666778899999999999999999999999999999999999999963 388886 5666677777777776555
No 206
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.40 E-value=0.006 Score=50.40 Aligned_cols=90 Identities=10% Similarity=0.019 Sum_probs=71.0
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccch-HHH
Q 033188 18 KINYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSV--FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGR-YNT 94 (125)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~--lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR-~~~ 94 (125)
...+.+||.+++.....+...+.++......-.|+. + .+=+.+..++++........++.|+.|+-+-|. |+ |+.
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~-~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQ-KLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhh-hcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 346789999998888887776666644444456763 4 455667778999999999999999999999996 76 788
Q ss_pred HHHHHHHHHHHHHHH
Q 033188 95 LGFATVASFLVLASA 109 (125)
Q Consensus 95 i~~~~~~~~lg~~l~ 109 (125)
++.|+++.++|.++=
T Consensus 105 li~s~ii~~~g~llY 119 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLY 119 (488)
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999999998874
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.38 E-value=0.06 Score=44.68 Aligned_cols=65 Identities=20% Similarity=0.231 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
.+....-..+..++|+.-..+++.|.. ..++++++++...++..+...++-++.|+++|+. ..++
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~ 364 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRA 364 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccch
Confidence 333333344556777777788888885 8899999999999999999999999999999996 6333
No 208
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.34 E-value=0.1 Score=41.10 Aligned_cols=62 Identities=16% Similarity=-0.047 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRY 92 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~ 92 (125)
|..+......++....+|++..++|+|+. +.|++.+ +.....+....+ .+..++++||. .||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g---~~g~~~~~d~~-~r~ 253 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAG---LIGVAVIPDRV-ARA 253 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHH---HHHHHHhhHHh-hhh
Confidence 45566666777788889999999999995 4678865 433333333333 34458899985 654
No 209
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.016 Score=47.53 Aligned_cols=54 Identities=19% Similarity=0.274 Sum_probs=50.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 55 VFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 55 ~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
++++++++-+.+.+.+.....++++.+|+++||+ |-|+++.++.++..++.++.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~ 120 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLT 120 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999997 99999999999988888775
No 210
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.01 E-value=0.11 Score=33.08 Aligned_cols=62 Identities=10% Similarity=-0.067 Sum_probs=54.0
Q ss_pred HHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 50 IYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 50 ~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
-.++++.++|.++++.+.+.......++.+...++.++. .+++.+..+.+...+..+.++..
T Consensus 16 P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 16 PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999995 88889999988888887777643
No 211
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.99 E-value=0.059 Score=46.66 Aligned_cols=80 Identities=21% Similarity=0.321 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHH-HHHHHHHHHHHHHHHHhhhhc-cchHHHHHHHHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATII-NIFNGTANFGTMIGAYLCDTY-FGRYNTLGFATVASFLVL 106 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~-~~~~~~~~~~~~l~G~laDr~-lGR~~~i~~~~~~~~lg~ 106 (125)
..+....++...+-|..+|+|-|+.+++|.+.+.|.... ++......++..+||++.-|+ +.-|.+..+..+..++.+
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 445666788889999999999999999999999998887 666667788999999999775 344555555555555554
Q ss_pred HH
Q 033188 107 AS 108 (125)
Q Consensus 107 ~l 108 (125)
++
T Consensus 476 ~~ 477 (735)
T KOG3626|consen 476 LF 477 (735)
T ss_pred HH
Confidence 44
No 212
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=95.97 E-value=0.18 Score=39.22 Aligned_cols=48 Identities=13% Similarity=0.145 Sum_probs=35.6
Q ss_pred HHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 033188 45 LANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYN 93 (125)
Q Consensus 45 ~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~ 93 (125)
....+.|+.+.+|+++.+.+...........++.++.+++.||+ ||+.
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~ 274 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLM 274 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 34455677777999999888877777777777788888888886 7433
No 213
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.86 E-value=0.0074 Score=49.64 Aligned_cols=84 Identities=13% Similarity=0.038 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---cchHHHHHHH-HH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY---FGRYNTLGFA-TV 100 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~---lGR~~~i~~~-~~ 100 (125)
+.+..+..+.+.--+.+-.=.++.+-|+ +.+|.+.+-.+.+-...=+.+.+.+|+.|..|||+ +||||.+++. .+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl-~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYL-QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHH-HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 3334443444444444444446667776 68999999998888888888999999999999963 4998875554 45
Q ss_pred HHHHHHHHH
Q 033188 101 ASFLVLASA 109 (125)
Q Consensus 101 ~~~lg~~l~ 109 (125)
...++..++
T Consensus 111 ~i~~~l~Li 119 (498)
T KOG0637|consen 111 LIAVSLFLI 119 (498)
T ss_pred HHHHHHhhh
Confidence 566666544
No 214
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=95.82 E-value=0.23 Score=39.24 Aligned_cols=65 Identities=9% Similarity=-0.076 Sum_probs=39.1
Q ss_pred HHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHH-HHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 44 TLANLLIYLTSVFNMKNITAATIINIFNGTANFG-TMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 44 ~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~-~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
...++|.|.++..+ ++.+............... .+++++..||+ +.++.+..+.++..++..++.
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~l~ 292 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRF-RLEHRLMAGLLIMSLSMFPIG 292 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHH
Confidence 44567888866655 5566655555555444433 34444444554 777777777777777766554
No 215
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.66 E-value=0.052 Score=44.60 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHhHhhcCCCHHHHHHHH-----HHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 29 FIIGNETFEKLGAVGTL---ANLLIYLTSVFNMKNITAATII-----NIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 29 ~~~~~~~~~~~~~y~~~---~~l~~yl~~~lg~~~~~a~~~~-----~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
.+....+...++++... .+...+.....+.+..+...-. ........+.+++-|.++||+ |||..+....+
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~ 100 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLF 100 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHH
Confidence 33334444444444333 4444554444443333331111 133456778899999999997 99999999998
Q ss_pred HHHHHHHHHhhcc
Q 033188 101 ASFLVLASALEQR 113 (125)
Q Consensus 101 ~~~lg~~l~~~~~ 113 (125)
...++...+..++
T Consensus 101 ~~~l~~~~~~~~~ 113 (463)
T KOG2816|consen 101 GTILPALCLLFQG 113 (463)
T ss_pred HHHHhHHHHHHHH
Confidence 8888877776544
No 216
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.34 E-value=0.38 Score=34.02 Aligned_cols=56 Identities=21% Similarity=0.328 Sum_probs=40.3
Q ss_pred HHHHhHhhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 48 LLIYLTSVFNMKN--ITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 48 l~~yl~~~lg~~~--~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.+.+. ...+.+. .........+.....+..++.|.++||+ |||+.+..+.....++
T Consensus 25 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~ 82 (338)
T COG0477 25 LPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLG 82 (338)
T ss_pred HHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHH
Confidence 33343 3344344 4667777788888888889999999997 9998888887654444
No 217
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=94.86 E-value=0.00034 Score=55.44 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 26 AMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 26 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.....+.+........+....+...++.+..+.++. ............++.+++.++.||+ |||+.++.+.....+.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444333332333333333355666666 3333445556667778888999996 9999999988877766
Q ss_pred HHHHh
Q 033188 106 LASAL 110 (125)
Q Consensus 106 ~~l~~ 110 (125)
.+.+.
T Consensus 330 ~~~~~ 334 (451)
T PF00083_consen 330 SLILG 334 (451)
T ss_pred ccccc
Confidence 66553
No 218
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=94.72 E-value=1.2 Score=35.86 Aligned_cols=72 Identities=13% Similarity=-0.037 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 38 KLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 38 ~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
....-....+...|+++.-|.+.+......++....=...-.+.+++-.|+ |-++++.++++.+.+=..+.+
T Consensus 220 ~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 220 GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 333434456677888544336777777666677776667777889999996 999999999988776655544
No 219
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=94.39 E-value=1.8 Score=35.22 Aligned_cols=84 Identities=13% Similarity=0.001 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHH----HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNIT----AATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~----a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
|..|............|+..-...++|.+..+. ++.+ -+...++-..+=...-.+..++-+|+ |.|+.++++.+
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~-~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQ-SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 455555544545555666666667888765543 3333 34444555555666677889999996 99999999988
Q ss_pred HHHHHHHHHh
Q 033188 101 ASFLVLASAL 110 (125)
Q Consensus 101 ~~~lg~~l~~ 110 (125)
...+=.+..+
T Consensus 298 i~~iRi~~~~ 307 (412)
T PF01306_consen 298 IMAIRIIGSG 307 (412)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7766555543
No 220
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=93.89 E-value=0.3 Score=39.97 Aligned_cols=58 Identities=16% Similarity=0.057 Sum_probs=44.7
Q ss_pred HHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 50 IYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 50 ~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
.-+....|++..++..+.........++.-..|.++|++ |||+......+...+-..+
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~i 159 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVI 159 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHh
Confidence 334455788888888888888888889999999999997 9999888777655444333
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=93.83 E-value=3.1 Score=34.02 Aligned_cols=57 Identities=21% Similarity=0.258 Sum_probs=48.1
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
.+-+++++|+.+..|++++++....+.+-.+..++=.++.++-.|+ --.|.+...++
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~ 310 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYAL 310 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHH
Confidence 4456788999888999999999999999999999998888888886 77777766663
No 222
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.83 E-value=0.017 Score=48.20 Aligned_cols=77 Identities=22% Similarity=0.339 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhhhc-cchHHHHHHHHHHHHHHHHH
Q 033188 32 GNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNG-TANFGTMIGAYLCDTY-FGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 32 ~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~-~~~~~~~l~G~laDr~-lGR~~~i~~~~~~~~lg~~l 108 (125)
.....+....-|..+|+|-|+.+++++++++|+.......+ .+.++.++||++..|+ +..|+.+.+..+...++.++
T Consensus 312 la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~ 390 (539)
T PF03137_consen 312 LAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVIL 390 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 34455677777888999999999999999999888755444 6778899999999987 45566676666666665554
No 223
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=93.69 E-value=0.7 Score=38.24 Aligned_cols=51 Identities=10% Similarity=-0.028 Sum_probs=39.9
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 55 VFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 55 ~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.-|++...+........+.+.++..++|.++||.=.-|+++++......++
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 357788888999999999999999999999999833344566666665666
No 224
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=93.57 E-value=0.84 Score=38.88 Aligned_cols=88 Identities=11% Similarity=0.023 Sum_probs=59.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHH---HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHH-HHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNI---TAATIINIFNGTANFGTMIGAYLCDTYFGRYNT-LGF 97 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~---~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~-i~~ 97 (125)
+++|.+...+.+.+.....||.+..+.|....+.++-|+. ..............++..+.|.+.-++ +|.|- +++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHH
Confidence 3446666666677777888888877888776666655543 344555556666677778888888875 77665 457
Q ss_pred HHHHHHHHHHHHh
Q 033188 98 ATVASFLVLASAL 110 (125)
Q Consensus 98 ~~~~~~lg~~l~~ 110 (125)
++++..++..+++
T Consensus 386 ~~~~~ta~~Gama 398 (599)
T PF06609_consen 386 GSVLMTAFCGAMA 398 (599)
T ss_pred HHHHHHHHHHHHH
Confidence 7777776656654
No 225
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=93.15 E-value=0.48 Score=38.26 Aligned_cols=61 Identities=11% Similarity=-0.009 Sum_probs=54.4
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+..=..+.+|++.+.+....+.=..+...+.|++.+++.|+ |..|.+..+.++..+|.++=
T Consensus 34 LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 34 LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIR 94 (395)
T ss_pred hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Confidence 33555688999999999999999999999999999999996 99999999999998887663
No 226
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.01 E-value=2.3 Score=34.84 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=48.6
Q ss_pred HHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 47 NLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 47 ~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.++.|+.++ |+++..-+..-....+.+..++.+..++-+|+ |-.|+=.++.......
T Consensus 280 lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~ 336 (432)
T PF06963_consen 280 LMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVC 336 (432)
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHH
Confidence 467888766 99999999999999999999999999999997 9999888887754433
No 227
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=92.02 E-value=0.3 Score=39.70 Aligned_cols=55 Identities=11% Similarity=-0.138 Sum_probs=49.1
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+.+|+++++.........+...++..+.+.+.+|+ +.|+++.++.++..++....
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~ 335 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFD 335 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCc
Confidence 56899999999999999999999999999999996 99999999999888877553
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=91.84 E-value=0.88 Score=37.35 Aligned_cols=70 Identities=9% Similarity=-0.011 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHH----HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHH-------HHHHHHHHHHHHH
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNI----TAATIINIFNGTANFGTMIGAYLCDTYFGRYNT-------LGFATVASFLVLA 107 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~----~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~-------i~~~~~~~~lg~~ 107 (125)
..|......++.|.++..+.+.. ......+.......+..|+.|++.||. |||+. +.+|.++..+|.+
T Consensus 283 ~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~~~ 361 (489)
T PRK10207 283 ILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLGFL 361 (489)
T ss_pred HHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 33444445666777543322110 123344444455667778889999996 99873 6677777666665
Q ss_pred HH
Q 033188 108 SA 109 (125)
Q Consensus 108 l~ 109 (125)
.+
T Consensus 362 ~~ 363 (489)
T PRK10207 362 TA 363 (489)
T ss_pred HH
Confidence 43
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.42 E-value=0.35 Score=39.63 Aligned_cols=55 Identities=11% Similarity=-0.071 Sum_probs=46.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 56 FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 56 lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
++-++.+.............+..|+.|.+.||+ |+|-.+++|.+......++.+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFaf 155 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAF 155 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHH
Confidence 445566667788888888999999999999996 9999999999999888888763
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=90.39 E-value=5.1 Score=33.17 Aligned_cols=90 Identities=8% Similarity=-0.018 Sum_probs=57.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-cCCCHH------H----HHHHHHHHHHHHHHHHHHHHHhhhhc
Q 033188 20 NYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSV-FNMKNI------T----AATIINIFNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-lg~~~~------~----a~~~~~~~~~~~~~~~~l~G~laDr~ 88 (125)
.++-+|.++.+..+.++.=++++....|.+.|..++ +|-++. + ..+....+.....+...+--.+++++
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~ 332 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW 332 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456778888888888887777777777777887643 442221 1 23444445555555566667788996
Q ss_pred cch-HHHHHHHHHHHHHHHHHHh
Q 033188 89 FGR-YNTLGFATVASFLVLASAL 110 (125)
Q Consensus 89 lGR-~~~i~~~~~~~~lg~~l~~ 110 (125)
|+ |++-..+.++..+|.+...
T Consensus 333 -g~~k~~~~~s~~~~~~~l~~~~ 354 (477)
T TIGR01301 333 -GAGKRLWGIVNIILAICLAATV 354 (477)
T ss_pred -ccchhHHHHHHHHHHHHHHHHH
Confidence 95 5665777666666666653
No 231
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.70 E-value=0.0094 Score=47.08 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=47.6
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
+.++.....+...++-....++++-=..+.+.++|++-||..|-|..-++-++..++|.+..+-
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~ 129 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAA 129 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 3455555555555566666777777777899999999999999988766667777888887763
No 232
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=88.47 E-value=5.7 Score=30.45 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHH
Q 033188 60 NITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGF 97 (125)
Q Consensus 60 ~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~ 97 (125)
..+++.+.......+.+.|++.|.++|++ |.+..+.+
T Consensus 263 ~~~asai~~~~~~Gg~i~P~l~G~lad~~-g~~~a~~v 299 (310)
T TIGR01272 263 TSQGSGILCLAIVGGAIVPLLQGSLADCL-GIQLAFAL 299 (310)
T ss_pred hhhhHHHHHHHHhcchHHHHHHHHHHHhc-cchHHHHH
Confidence 33444455666667788999999999996 98777654
No 233
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=88.42 E-value=0.14 Score=42.83 Aligned_cols=72 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhh
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~ 111 (125)
...++......+-+.+.++++.+++..+.+.+.+...+..++..++++|. -|-|-+.+|+++..+|.++.+.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc
Confidence 44444444444556678999999999999999999999999999999995 7777888999999999888763
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=86.69 E-value=8.9 Score=26.93 Aligned_cols=51 Identities=10% Similarity=0.161 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 57 NMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 57 g~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
+.++.+......+......+.++++..+-+++ |.|+++.+|.+.+.+=.+.
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~ 83 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIAS 83 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHH
Confidence 34455556666777777777888888899995 9999999999887754443
No 235
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=86.64 E-value=5.6 Score=33.14 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=39.2
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
+.+|+...+-....++|.+...++.+++|++.||+ .-.+.+....+..
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILW 121 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHH
Confidence 34677888889999999999999999999999997 8666665555433
No 236
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=84.96 E-value=0.17 Score=39.94 Aligned_cols=55 Identities=18% Similarity=0.126 Sum_probs=40.0
Q ss_pred HHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHH
Q 033188 50 IYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLV 105 (125)
Q Consensus 50 ~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg 105 (125)
.|+.+.+|+.+.+-........+...++..+.|-++|+- ||||.-..-++-+.+.
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYiLs 115 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYILS 115 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHHHH
Confidence 456667788888877776666667777778888899995 9999765555544443
No 237
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=83.76 E-value=16 Score=29.91 Aligned_cols=76 Identities=9% Similarity=-0.080 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhh--cCCCHH------HHHHHHHHHHHHHHHHHHHH----HHhhhhccchHHHHHHHHHH
Q 033188 34 ETFEKLGAVGTLANLLIYLTSV--FNMKNI------TAATIINIFNGTANFGTMIG----AYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 34 ~~~~~~~~y~~~~~l~~yl~~~--lg~~~~------~a~~~~~~~~~~~~~~~~l~----G~laDr~lGR~~~i~~~~~~ 101 (125)
.+.....||.+...++++++.. -+.+++ ...+..++..+...++.|+. +++.||. +..+.+.++.++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 3344566666665566554321 111111 13444455555555666665 6666664 677888898988
Q ss_pred HHHHHHHHh
Q 033188 102 SFLVLASAL 110 (125)
Q Consensus 102 ~~lg~~l~~ 110 (125)
..+|.+.++
T Consensus 360 ~~l~f~~l~ 368 (500)
T PRK09584 360 CSGAFLVLP 368 (500)
T ss_pred HHHHHHHHH
Confidence 888887754
No 238
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=83.72 E-value=8.4 Score=31.14 Aligned_cols=62 Identities=8% Similarity=0.008 Sum_probs=42.9
Q ss_pred HHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--c--chHHHHHHHHHHHHHHHHHHhh
Q 033188 49 LIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTY--F--GRYNTLGFATVASFLVLASALE 111 (125)
Q Consensus 49 ~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~--l--GR~~~i~~~~~~~~lg~~l~~~ 111 (125)
..|+.+++|+++++..... .....-+..-|+.|.++|.+ . -||+=+.+++++..++...++.
T Consensus 13 ~~~l~~~l~ls~~~~~~~~-~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~ 78 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLS-SLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL 78 (433)
T ss_pred HHHHHHHcCCCHHHHHHHH-HHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3467788999999866643 44455677889999999986 1 3555577777777555555543
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=81.88 E-value=7.1 Score=31.87 Aligned_cols=64 Identities=13% Similarity=-0.026 Sum_probs=47.1
Q ss_pred HHHHHHHhHhh-cCCCHHHHHHHH-HHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 45 LANLLIYLTSV-FNMKNITAATII-NIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 45 ~~~l~~yl~~~-lg~~~~~a~~~~-~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
..|+.-|++++ .|+++.+-..-+ =+..-......++...++|.. |.|++++++++..++...++
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~ll 88 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLL 88 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHH
Confidence 35567888877 899888875443 344444445667789999995 99999999998877776665
No 240
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=81.41 E-value=14 Score=30.55 Aligned_cols=46 Identities=13% Similarity=-0.060 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHH-HHHHHHHHHHh
Q 033188 64 ATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFAT-VASFLVLASAL 110 (125)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~-~~~~lg~~l~~ 110 (125)
....++......+..|+-|-++|+- |+||-++... ++..+...++.
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~ 119 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLW 119 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHH
Confidence 4567788888889999999999996 8887655544 34444444443
No 241
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=81.05 E-value=4.7 Score=33.25 Aligned_cols=64 Identities=16% Similarity=0.264 Sum_probs=53.7
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHH-HhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGA-YLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G-~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
++.|+..++++++++.+...+..+....+...+.. .+.-. +|-|+++..|.....++..+.+..
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~ 328 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFA 328 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHh
Confidence 34667778999999999999999999999988887 66666 599999999999888888777643
No 242
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=80.25 E-value=3.1 Score=34.18 Aligned_cols=68 Identities=18% Similarity=0.066 Sum_probs=44.9
Q ss_pred HHHHHHHHhHhhcCC---CHHHH----HHHHHHHHHHHHHHHHHHHHhhhhccchHHHH-HHHHHHHHHHHHHHhhc
Q 033188 44 TLANLLIYLTSVFNM---KNITA----ATIINIFNGTANFGTMIGAYLCDTYFGRYNTL-GFATVASFLVLASALEQ 112 (125)
Q Consensus 44 ~~~~l~~yl~~~lg~---~~~~a----~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i-~~~~~~~~lg~~l~~~~ 112 (125)
++.+.|.|+++..+- ++.++ ....++......+..|+-|-++|+. |+||.. ....++-.+...+++.-
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i 109 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI 109 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh
Confidence 445677788766543 44333 5556777777888899999999997 877754 44444555555555533
No 243
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=78.29 E-value=6 Score=33.00 Aligned_cols=33 Identities=9% Similarity=0.250 Sum_probs=29.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 033188 56 FNMKNITAATIINIFNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 56 lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~ 88 (125)
.|.+.++......+...++.++.++||.++|++
T Consensus 278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 278 IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred hCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 466777888889999999999999999999993
No 244
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=71.92 E-value=21 Score=22.26 Aligned_cols=44 Identities=11% Similarity=0.122 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 64 ATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
+...........+++.++|++.|.. |.+..+....+...++.+.
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHH
Confidence 3444566677778899999999996 8888777766655555443
No 245
>PRK03612 spermidine synthase; Provisional
Probab=70.88 E-value=61 Score=27.09 Aligned_cols=60 Identities=13% Similarity=0.027 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDT 87 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr 87 (125)
+.+...+.+.-+..+.|-.+..-+.. ..+|-+....+.+++++.+...++..++++++++
T Consensus 17 ~~l~~~~f~sg~~~L~yEv~~~r~l~---~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 17 ALLLAAVFVCAACGLVYELLLGTLAS---YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44444444444444444444333333 3467778888888899999888888888887755
No 246
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.84 E-value=19 Score=24.15 Aligned_cols=35 Identities=9% Similarity=-0.156 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHH
Q 033188 73 TANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLA 107 (125)
Q Consensus 73 ~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~ 107 (125)
.+.+....-||+-|+|.|.++--++...+...|..
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG 88 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAG 88 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 34444556699999999999864444443333333
No 247
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=70.38 E-value=48 Score=26.96 Aligned_cols=72 Identities=6% Similarity=-0.114 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhHhhcCCCHHH----HHHHHHHHHHHHHHHHHHHH----HhhhhccchHHH--HHHHHHHHHHHHHH
Q 033188 39 LGAVGTLANLLIYLTSVFNMKNIT----AATIINIFNGTANFGTMIGA----YLCDTYFGRYNT--LGFATVASFLVLAS 108 (125)
Q Consensus 39 ~~~y~~~~~l~~yl~~~lg~~~~~----a~~~~~~~~~~~~~~~~l~G----~laDr~lGR~~~--i~~~~~~~~lg~~l 108 (125)
..|.-..+.++.|..+..+.+... .....++......+..|+-. .+.||-.+.+.. +.+|.++..+|.+.
T Consensus 286 ~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~ 365 (475)
T TIGR00924 286 VLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLT 365 (475)
T ss_pred HHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 344444455666665544333211 34555555555555555533 455541122333 36777777777766
Q ss_pred Hh
Q 033188 109 AL 110 (125)
Q Consensus 109 ~~ 110 (125)
++
T Consensus 366 ~~ 367 (475)
T TIGR00924 366 FA 367 (475)
T ss_pred HH
Confidence 54
No 248
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=70.03 E-value=7.6 Score=32.61 Aligned_cols=36 Identities=14% Similarity=0.089 Sum_probs=28.1
Q ss_pred HHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhcc
Q 033188 77 GTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 77 ~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
+-.++.++.|++ |||++-+.+.+.+.+-.+.++...
T Consensus 364 Gyw~tv~~id~i-GRk~iq~~GF~~~~i~~~~~~~~y 399 (538)
T KOG0252|consen 364 GYWFTVYFIDII-GRKYIQLMGFFIMTIFFFVIAGPY 399 (538)
T ss_pred ceeEEEEEeehh-hhHHHHHhhHHHHHHHHHHHcCCc
Confidence 344566789996 999999999998888877776544
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=67.44 E-value=66 Score=26.11 Aligned_cols=36 Identities=14% Similarity=-0.058 Sum_probs=28.1
Q ss_pred HHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 76 FGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 76 ~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
-.-...+..-|+. |||.....+.....++.+..+..
T Consensus 365 p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~ 400 (521)
T KOG0255|consen 365 PAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWL 400 (521)
T ss_pred hHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHh
Confidence 3344457899996 99999999999888888776543
No 250
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=67.42 E-value=66 Score=26.09 Aligned_cols=80 Identities=14% Similarity=0.062 Sum_probs=40.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVA 101 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~ 101 (125)
+..|.++.+-...+.....|-|. .++.+.....+| ............. .+.+.+.+-.+ +|-|+++.++...
T Consensus 26 ~~~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg--~~sl~~~y~~l~~----s~m~~~~~Ir~-~g~K~tm~lav~~ 97 (390)
T KOG3097|consen 26 GILKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLG--TVSLGALYLSLID----SSMFMPLLIRF-LGTKWTMVLAVFP 97 (390)
T ss_pred chhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCcc--cchhhhhhHHHHH----HHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 34444444333333333344444 567666644333 2222222222222 22233356666 5999999998877
Q ss_pred HHHHHHHH
Q 033188 102 SFLVLASA 109 (125)
Q Consensus 102 ~~lg~~l~ 109 (125)
+..-....
T Consensus 98 Y~lyiA~N 105 (390)
T KOG3097|consen 98 YALYIAAN 105 (390)
T ss_pred HHHHHHhh
Confidence 76655544
No 251
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=67.27 E-value=27 Score=21.57 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 033188 61 ITAATIINIFNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 61 ~~a~~~~~~~~~~~~~~~~l~G~laDr~ 88 (125)
..+.........+..+.+.+.|++.+.+
T Consensus 7 ~~ae~l~~~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 7 RLAEKLMQYILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555556666677777889999887
No 252
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=67.27 E-value=4.3 Score=35.52 Aligned_cols=85 Identities=13% Similarity=0.093 Sum_probs=66.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
+.+..+++...+.-..+.+......+-+.+.++++.+++..+...+-+...+...+..|.+-|. -|-|.|.+|++++.+
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 3444555555444444445555566677778999999999999999999999999999999996 888899999999999
Q ss_pred HHHHHh
Q 033188 105 VLASAL 110 (125)
Q Consensus 105 g~~l~~ 110 (125)
|.++.+
T Consensus 175 gsll~a 180 (735)
T KOG3626|consen 175 GSLLFA 180 (735)
T ss_pred HHHHHh
Confidence 988876
No 253
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=63.65 E-value=31 Score=24.26 Aligned_cols=44 Identities=9% Similarity=-0.007 Sum_probs=30.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHH
Q 033188 56 FNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATV 100 (125)
Q Consensus 56 lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~ 100 (125)
+|+++.+-..........=.++-+++.+++|+. |+-..+.+...
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L-~~~e~~~~~~~ 110 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQYL-FFSELIVIFGA 110 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHH
Confidence 566777666666666666667777788888885 77776554444
No 254
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=61.35 E-value=28 Score=19.71 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 72 GTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 72 ~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
....+.....|+..|+.+|..+...+..++.
T Consensus 11 ~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 11 AAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3344556677888888889976655544443
No 255
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=60.41 E-value=35 Score=28.61 Aligned_cols=89 Identities=10% Similarity=-0.113 Sum_probs=54.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhh------cCCCHHHH-----------HHHHHHHHHHHHHHHHHHH
Q 033188 20 NYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSV------FNMKNITA-----------ATIINIFNGTANFGTMIGA 82 (125)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~------lg~~~~~a-----------~~~~~~~~~~~~~~~~l~G 82 (125)
.+.-+|.++.+....++.-.+......|.+-|+-++ -+-+++++ .+-..+..+...+.+.+--
T Consensus 274 ~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~ 353 (498)
T KOG0637|consen 274 LKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVE 353 (498)
T ss_pred HhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 335667788777777776666655555555444333 12222222 4556777778888888999
Q ss_pred HhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 83 YLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 83 ~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+++||+ |-|+..+.+...+.++..+.
T Consensus 354 ~l~~~~-g~r~~y~~~~~~f~~~~~~~ 379 (498)
T KOG0637|consen 354 KLSRKF-GTRKRYWGGVNAFGLATGLA 379 (498)
T ss_pred HHHHhc-CcceEEeehhHHHHHHHHHH
Confidence 999997 96655555555455555544
No 256
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=58.85 E-value=21 Score=28.28 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=39.9
Q ss_pred HHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhh---------hhccchHHH
Q 033188 43 GTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLC---------DTYFGRYNT 94 (125)
Q Consensus 43 ~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~la---------Dr~lGR~~~ 94 (125)
...+|+..|++ +.|+++++.+.+..+.+..-.+.+|+.|..+ ||+ |||+.
T Consensus 35 cWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~ 93 (412)
T KOG4830|consen 35 CWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMS 93 (412)
T ss_pred HHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceee
Confidence 45678888886 4577888888999999999999999998654 686 88874
No 257
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=58.78 E-value=7.1 Score=32.21 Aligned_cols=60 Identities=13% Similarity=0.018 Sum_probs=34.5
Q ss_pred HHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 48 LLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 48 l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
+++|..+++.-+.-+-..+-.-......+++.+.|.++||+ |.-+-+....-+.++|..+
T Consensus 293 lslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~ 352 (464)
T KOG3764|consen 293 LSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSS 352 (464)
T ss_pred cHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHh
Confidence 35666666664443444444445555678899999999997 8333332323333455433
No 258
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=57.89 E-value=53 Score=21.80 Aligned_cols=32 Identities=9% Similarity=-0.099 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVF 56 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l 56 (125)
.-+...........++|-....+.+-++.+.+
T Consensus 49 ~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 49 HFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444445555555555555555443
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=56.18 E-value=22 Score=29.45 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=46.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hccchHHH
Q 033188 20 NYRGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCD-----TYFGRYNT 94 (125)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laD-----r~lGR~~~ 94 (125)
.++..+.+..++..-....+-+ |.....|..++ .-|.|-++.+.. .+...=+-.-++++.+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~f--S~ay~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIF--SFAYWPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhh--hhhhhHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 4455566666666555554443 45555666664 334444333222 222233345677888888 96 99998
Q ss_pred HHHHHHHHHHHHHHHh
Q 033188 95 LGFATVASFLVLASAL 110 (125)
Q Consensus 95 i~~~~~~~~lg~~l~~ 110 (125)
-++-+- +.+|..++.
T Consensus 101 Wvvp~q-~llG~~mll 115 (510)
T KOG3574|consen 101 WVVPCQ-YLLGLFMLL 115 (510)
T ss_pred eeeehH-HHHHHHHHH
Confidence 655443 344555443
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=51.20 E-value=73 Score=26.71 Aligned_cols=47 Identities=11% Similarity=-0.054 Sum_probs=28.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCHHHHHHHHH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKNITAATIIN 68 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~~~a~~~~~ 68 (125)
-.|+..+.++...+.....+..+.+-.+.+....+++..+++.....
T Consensus 259 ~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~g 305 (488)
T KOG2325|consen 259 LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNG 305 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhh
Confidence 35566666666666666666655554555555567777777754443
No 261
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=49.52 E-value=1.5e+02 Score=24.60 Aligned_cols=71 Identities=6% Similarity=-0.188 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCH-----HHHHHHHHHHHH-HHHHHHHHHHHhhhhccchHHHHHHH
Q 033188 25 KAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKN-----ITAATIINIFNG-TANFGTMIGAYLCDTYFGRYNTLGFA 98 (125)
Q Consensus 25 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~-----~~a~~~~~~~~~-~~~~~~~l~G~laDr~lGR~~~i~~~ 98 (125)
|.+.......++-...|+.+.. +.+.+..+. +.-...-+.... ...++.++-+++++|+ +|++.+-+.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~ 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTV 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHH
Confidence 4444444555555555554432 234454432 222333333323 3444488899999996 999987665
Q ss_pred HHH
Q 033188 99 TVA 101 (125)
Q Consensus 99 ~~~ 101 (125)
...
T Consensus 81 ~~~ 83 (472)
T TIGR00769 81 ISP 83 (472)
T ss_pred HHH
Confidence 443
No 262
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=45.65 E-value=65 Score=26.34 Aligned_cols=54 Identities=17% Similarity=-0.060 Sum_probs=33.1
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-----hHHH-HHHHHHHHHHHHHHH
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFG-----RYNT-LGFATVASFLVLASA 109 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lG-----R~~~-i~~~~~~~~lg~~l~ 109 (125)
.+++.+..-....+..-..... .-+..|+.||+. + ||.. |+.|.++...|..+.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~a 67 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIA 67 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHH
Confidence 4566666665555554444443 567889999997 6 5554 555555655554443
No 263
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=44.61 E-value=1.4e+02 Score=25.87 Aligned_cols=75 Identities=19% Similarity=0.366 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 33 NETFEKLGAVGTLANLLIYLTSV--FNMKNITAATIINIFN-GTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 33 ~~~~~~~~~y~~~~~l~~yl~~~--lg~~~~~a~~~~~~~~-~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
++..+.+.+-.+..-...|.... -|++.+..+.....+- ..-.+++++||.+-.|+ |-+.+..+.++.+++..++
T Consensus 465 ieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 465 IEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHH
Confidence 44444444443333344555322 3444444444444443 34568999999999996 9999888877766555444
No 264
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=44.46 E-value=98 Score=25.80 Aligned_cols=45 Identities=16% Similarity=0.116 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 64 ATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+.........+.++|+++|++.|++ |-+..+..+.+...++.+..
T Consensus 141 ~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 141 SLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHHHHHHHHHHH
Confidence 4444555667889999999999997 98888777766655555443
No 265
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=43.73 E-value=53 Score=21.87 Aligned_cols=50 Identities=10% Similarity=0.080 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 60 NITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 60 ~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
++.+.-+...+.++..+.+++.+|..|+. -.-+-=.++..++.+|..++.
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheE
Confidence 46678888899999999999999999997 555555566777777776653
No 266
>PRK02237 hypothetical protein; Provisional
Probab=41.81 E-value=86 Score=20.93 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 61 ITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 61 ~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+++.-+...+.++..+.+++.+|..|.. =.-+-=.+|..++.+|..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHh
Confidence 5578888999999999999999999997 44444456666777777665
No 267
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=41.54 E-value=42 Score=20.21 Aligned_cols=34 Identities=12% Similarity=-0.215 Sum_probs=23.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcC
Q 033188 23 GWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFN 57 (125)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg 57 (125)
.....|+.+++.....+.|+...+.-..|+ ++++
T Consensus 25 ~~~WyWIgvgaL~G~~vlFNil~~laL~yL-~p~~ 58 (65)
T PF08370_consen 25 ESYWYWIGVGALLGFIVLFNILFTLALTYL-NPLG 58 (65)
T ss_pred CCcEEeehHHHHHHHHHHHHHHHHHHHHhc-CCcC
Confidence 334457777777777788887777777787 4443
No 268
>PRK11469 hypothetical protein; Provisional
Probab=41.47 E-value=1.3e+02 Score=21.64 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHhhc
Q 033188 57 NMKNITAATIINIFNGTAN-FGTMIGAYLCDTYFGRYNTLGFATVASFLVLASALEQ 112 (125)
Q Consensus 57 g~~~~~a~~~~~~~~~~~~-~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~ 112 (125)
|.+.-.......+...+.. .+..+|.+++++ +|||..+.-|.++..+|.-.+..|
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~-~g~~a~~lgG~iLI~iGi~il~~h 185 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSI-IGKKAEILGGLVLIGIGVQILWTH 185 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443 444566777777 499999999999999998777543
No 269
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=37.56 E-value=1.2e+02 Score=19.88 Aligned_cols=15 Identities=7% Similarity=-0.119 Sum_probs=8.0
Q ss_pred HHHHHhhhhccchHH
Q 033188 79 MIGAYLCDTYFGRYN 93 (125)
Q Consensus 79 ~l~G~laDr~lGR~~ 93 (125)
.+.|.--|+.+|-.+
T Consensus 60 ~~lG~WLD~~~~t~~ 74 (100)
T TIGR02230 60 VAVGIWLDRHYPSPF 74 (100)
T ss_pred HHHHHHHHhhcCCCc
Confidence 334555566556544
No 270
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=35.85 E-value=21 Score=23.93 Aligned_cols=46 Identities=13% Similarity=0.006 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhh-hhccchHHHHHHHHHHHHHHH
Q 033188 59 KNITAATIINIFNGTANFGTMIGAYLC-DTYFGRYNTLGFATVASFLVL 106 (125)
Q Consensus 59 ~~~~a~~~~~~~~~~~~~~~~l~G~la-Dr~lGR~~~i~~~~~~~~lg~ 106 (125)
++.+-+..+-+.....++++.++|++- ++. .++++ ..|..+.+.|.
T Consensus 63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~-~~~~~-~~G~~Li~~Gv 109 (113)
T PF10639_consen 63 GSADLSLAVPIANSLAFVFTALTGWLLGEEV-ISRRT-WLGMALILAGV 109 (113)
T ss_pred hcCCceeeehHHhHHHHHHHHHHHHHhcCcc-cchhH-HHHHHHHHcCe
Confidence 344445555566566666666666654 454 44443 45555555553
No 271
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=35.32 E-value=92 Score=22.64 Aligned_cols=19 Identities=5% Similarity=0.011 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 033188 70 FNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 70 ~~~~~~~~~~l~G~laDr~ 88 (125)
+.....+.+.+.|+++||.
T Consensus 91 yL~gfi~aa~l~G~l~~k~ 109 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKI 109 (184)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4445567788899999997
No 272
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=32.55 E-value=1.1e+02 Score=17.86 Aligned_cols=47 Identities=15% Similarity=0.099 Sum_probs=20.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH----HHHhhhhccchHHHHHHHHHHHHH
Q 033188 57 NMKNITAATIINIFNGTANFGTMI----GAYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 57 g~~~~~a~~~~~~~~~~~~~~~~l----~G~laDr~lGR~~~i~~~~~~~~l 104 (125)
+.+..........+.....+.+.+ |.+++++ ++++-..+.+.++..+
T Consensus 16 ~~~~~~~~~~~~~ig~~~~~~~~~G~~~G~~~~~~-~~~~~~~igg~iLi~i 66 (67)
T PF02659_consen 16 GISRRIILLIALIIGIFQFIMPLLGLLLGRRLGRF-IGSYAEWIGGIILIFI 66 (67)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 334333333444444444444444 4444444 3555444444444433
No 273
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=30.68 E-value=2.5e+02 Score=21.67 Aligned_cols=73 Identities=16% Similarity=0.243 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHhHhhcCCC-HHHHH----HHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh
Q 033188 37 EKLGAVGTLANLLIYLTSVFNMK-NITAA----TIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 37 ~~~~~y~~~~~l~~yl~~~lg~~-~~~a~----~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
-.++.-++..+...+..+++.-+ +++-. +..........++..+.+++.|++ |-.....++.+...++.+...
T Consensus 43 ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 43 IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHH
Confidence 36677788899999998887644 23322 333444445555666778999997 999999998888888877654
No 274
>COG3402 Uncharacterized conserved protein [Function unknown]
Probab=30.60 E-value=1.5e+02 Score=21.17 Aligned_cols=11 Identities=27% Similarity=0.389 Sum_probs=7.3
Q ss_pred CcccccCccCCC
Q 033188 1 MELENVKKTVGN 12 (125)
Q Consensus 1 ~~~~~~~~~~~~ 12 (125)
|| +|+.+|+.-
T Consensus 1 mr-~~~m~~~s~ 11 (161)
T COG3402 1 MR-ENPMNPLSK 11 (161)
T ss_pred CC-ccccccCCc
Confidence 77 777766543
No 275
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=29.94 E-value=1.5e+02 Score=18.70 Aligned_cols=22 Identities=18% Similarity=-0.002 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 033188 92 YNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 92 ~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
++++..+.++.+.|..+.+.|.
T Consensus 55 ~~~~~~a~~ig~~gGfl~ayqr 76 (86)
T PF10785_consen 55 GPAMRLAGAIGFFGGFLLAYQR 76 (86)
T ss_pred chHHHHHHHHHHHHHHHHHHHH
Confidence 5667777776677766666554
No 276
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=29.38 E-value=3.2e+02 Score=22.42 Aligned_cols=45 Identities=7% Similarity=0.118 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 64 ATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 64 ~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
+.+-.+....+.+.....|++..++ .+-.-+.++......|.+++
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLF 332 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHH
Confidence 6666777888888999999998775 78777776666555554444
No 277
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]
Probab=28.82 E-value=32 Score=28.02 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=33.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCH
Q 033188 22 RGWKAMPFIIGNETFEKLGAVGTLANLLIYLTSVFNMKN 60 (125)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~~~ 60 (125)
-.||.++.++...+.-+..++++.-++..|....+..++
T Consensus 60 ~kWR~~lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~ 98 (400)
T KOG3827|consen 60 LKWRWMLLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDP 98 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 478999999999999999999999999999887775555
No 278
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=28.16 E-value=1.7e+02 Score=20.25 Aligned_cols=23 Identities=13% Similarity=0.053 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHhhhhccchH
Q 033188 69 IFNGTANFGTMIGAYLCDTYFGRY 92 (125)
Q Consensus 69 ~~~~~~~~~~~l~G~laDr~lGR~ 92 (125)
-+.....+.+.+.|++++|. .++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~-~~~ 83 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERL-KRS 83 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccc
Confidence 34445556788889999995 654
No 279
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=27.53 E-value=3.3e+02 Score=22.70 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHH-HHHHHHHH
Q 033188 27 MPFIIGNETFEKLGAVGTLANLLIYL-TSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLG-FATVASFL 104 (125)
Q Consensus 27 ~~~~~~~~~~~~~~~y~~~~~l~~yl-~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~-~~~~~~~l 104 (125)
++.+++...+.....|....+...++ .+.+|+++.+..-+.......+.+....-....||..|.-+... .+..++.-
T Consensus 262 ~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP 341 (451)
T KOG2615|consen 262 VLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVP 341 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHH
Confidence 34444443333333332223334444 46689999999988888888888888888888888754444433 33333333
Q ss_pred HHHHH
Q 033188 105 VLASA 109 (125)
Q Consensus 105 g~~l~ 109 (125)
..+++
T Consensus 342 ~~lll 346 (451)
T KOG2615|consen 342 AFLLL 346 (451)
T ss_pred HHHHH
Confidence 33333
No 280
>PRK13755 putative mercury transport protein MerC; Provisional
Probab=27.38 E-value=34 Score=23.51 Aligned_cols=46 Identities=11% Similarity=0.057 Sum_probs=26.3
Q ss_pred HHHHhhhhccchHHHHHHHHHHHHHHHHHHhhccccceeeeeeccC
Q 033188 80 IGAYLCDTYFGRYNTLGFATVASFLVLASALEQRVSVIKFYIGYHF 125 (125)
Q Consensus 80 l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~~~~~~~~~f~ig~~~ 125 (125)
.-||++.|=+-|.-.=.++=++...+...+..+.-|...||.||++
T Consensus 66 algW~sHRQW~Rs~lG~iGP~lvl~~~~~~~~~~ws~~l~Y~gLal 111 (139)
T PRK13755 66 ALGWFSHRQWLRSALGMIGPALVLAAVFLLLGNGWSANLLYVGLAL 111 (139)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3489998853333222233345455555554445577888888763
No 281
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=26.60 E-value=1.4e+02 Score=25.12 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 71 NGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 71 ~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
...+.+.|++.++++|++ |.--.+..+.+.+.+|.+.-
T Consensus 165 NiGsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 165 NIGSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred ehHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHH
Confidence 355888999999999997 98888888888887776654
No 282
>COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism]
Probab=26.44 E-value=2.9e+02 Score=20.94 Aligned_cols=16 Identities=6% Similarity=0.104 Sum_probs=9.3
Q ss_pred cccc--CccCCCCCCCCc
Q 033188 3 LENV--KKTVGNDHDEPK 18 (125)
Q Consensus 3 ~~~~--~~~~~~~~~~~~ 18 (125)
.|+| +||++..+-..|
T Consensus 77 ~n~rt~~RPl~sG~vS~~ 94 (289)
T COG0382 77 INPRTKNRPLPSGRVSVK 94 (289)
T ss_pred CCCCccCCCCCCCCCCHH
Confidence 4555 666666655555
No 283
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=25.98 E-value=3.7e+02 Score=22.05 Aligned_cols=53 Identities=13% Similarity=0.012 Sum_probs=32.9
Q ss_pred HHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHH
Q 033188 49 LIYLTSVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVAS 102 (125)
Q Consensus 49 ~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~ 102 (125)
+.|+.+-.+-+---.+.....-.+...++.+.-|..-||. -|.|++..+.+..
T Consensus 26 ~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Q 78 (432)
T PF06963_consen 26 PLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQ 78 (432)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHH
Confidence 3444433322333334444455556667777888889996 9999988886543
No 284
>PTZ00207 hypothetical protein; Provisional
Probab=25.93 E-value=1.1e+02 Score=26.29 Aligned_cols=59 Identities=8% Similarity=0.079 Sum_probs=37.5
Q ss_pred HhHhhc-CCCHHH--HHHHHHHHHHHHHHHHHHHHHhhhhccchHH-------H--HHHHHHHHHHHHHHHhh
Q 033188 51 YLTSVF-NMKNIT--AATIINIFNGTANFGTMIGAYLCDTYFGRYN-------T--LGFATVASFLVLASALE 111 (125)
Q Consensus 51 yl~~~l-g~~~~~--a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~-------~--i~~~~~~~~lg~~l~~~ 111 (125)
+..+.+ |.+.++ ....++..++..+++=+.+|+++.. +-||+ + +.+..+ ..+++++++.
T Consensus 378 qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~-~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~ 448 (591)
T PTZ00207 378 FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW-SQKRRAEDRVPITIALFIPSV-CIITMLTLFL 448 (591)
T ss_pred HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH-HHhhccccccchhHHHHHHHH-HHHHHHHHHH
Confidence 334567 663333 3337889999999999999999933 34444 2 333334 6677777654
No 285
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.89 E-value=3.9e+02 Score=22.27 Aligned_cols=55 Identities=15% Similarity=0.128 Sum_probs=34.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhh---hhccchHHHHHHHHHHHHHHHHHHh
Q 033188 55 VFNMKNITAATIINIFNGTAN-FGTMIGAYLC---DTYFGRYNTLGFATVASFLVLASAL 110 (125)
Q Consensus 55 ~lg~~~~~a~~~~~~~~~~~~-~~~~l~G~la---Dr~lGR~~~i~~~~~~~~lg~~l~~ 110 (125)
..+.+...-..+.....+.+. ++..+.+.++ +++ ||++++.++.++..++.++.-
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~ 330 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIH 330 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHh
Confidence 444444444444444444433 2344455555 665 999999999999888877764
No 286
>PF07947 YhhN: YhhN-like protein; InterPro: IPR012506 The members of this family are similar to the hypothetical protein yhhN expressed by Escherichia coli (P37616 from SWISSPROT). Many of the members of this family are annotated as being possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. ; GO: 0016021 integral to membrane
Probab=25.54 E-value=1.5e+02 Score=20.81 Aligned_cols=31 Identities=16% Similarity=-0.046 Sum_probs=20.0
Q ss_pred HHHHHhhhhccc-hHHHHHHHHHHHHHHHHHH
Q 033188 79 MIGAYLCDTYFG-RYNTLGFATVASFLVLASA 109 (125)
Q Consensus 79 ~l~G~laDr~lG-R~~~i~~~~~~~~lg~~l~ 109 (125)
++.+.++|-.+. +++-...|.....++|++-
T Consensus 36 L~~s~~GD~~L~~~~~~f~~Gl~~F~~ahi~Y 67 (185)
T PF07947_consen 36 LLFSALGDVLLLDNKNFFLAGLGAFLLAHICY 67 (185)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 334566677666 6666677777777777664
No 287
>KOG0476 consensus Cl- channel CLC-2 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]
Probab=24.91 E-value=1.5e+02 Score=26.69 Aligned_cols=85 Identities=12% Similarity=0.007 Sum_probs=41.3
Q ss_pred ccCCchhHHHHH-HHHHHHHHHHH-H-----HHHHHHHHhHhhcCCCHHHHHHHHHHHHHHHHHHHHHH-----------
Q 033188 20 NYRGWKAMPFII-GNETFEKLGAV-G-----TLANLLIYLTSVFNMKNITAATIINIFNGTANFGTMIG----------- 81 (125)
Q Consensus 20 ~~~~~~~~~~~~-~~~~~~~~~~y-~-----~~~~l~~yl~~~lg~~~~~a~~~~~~~~~~~~~~~~l~----------- 81 (125)
+++|||.+.... +...+....-+ . +.++..+.+.....++.++--....+...++..+..+-
T Consensus 279 VrnYWRGFFAAtcsA~vFR~lavf~v~~~~tItA~yqT~F~~d~~F~~~ELp~FallGl~cGllGa~fVylhR~ivlf~R 358 (931)
T KOG0476|consen 279 VRNYWRGFFAATCSAFVFRLLAVFFVEAEVTITALYQTSFRPDFPFDVQELPFFALLGLLCGLLGALFVYLHRRIVLFLR 358 (931)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHcccchhhhHHHHhccCCCCCCCCHHHhHHHHHHHHHHhcccceeeeeeeeeeeeeh
Confidence 678999876443 44444433322 2 33333333333445566665554444444444433221
Q ss_pred -HHhhhhccchHHHHHHHHHHHHH
Q 033188 82 -AYLCDTYFGRYNTLGFATVASFL 104 (125)
Q Consensus 82 -G~laDr~lGR~~~i~~~~~~~~l 104 (125)
-+.+.++++|.|.+.-+.+..++
T Consensus 359 kn~~~~~~f~k~~llyp~~~a~v~ 382 (931)
T KOG0476|consen 359 KNRYAKKLFQKSRLLYPAFIALVF 382 (931)
T ss_pred hhHHHHHHHhhCccHHHHHHHHHH
Confidence 24455555666655544444333
No 288
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=23.96 E-value=4.2e+02 Score=21.99 Aligned_cols=38 Identities=11% Similarity=-0.113 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHH
Q 033188 57 NMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTL 95 (125)
Q Consensus 57 g~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i 95 (125)
+++-.++...+........+..-+.+...-+. |.+.++
T Consensus 48 ~L~~~~si~aillG~llG~i~~A~~s~~Ga~~-Glpqmi 85 (442)
T COG1457 48 GLSFGQSLLAILLGNLLGGIFMAYFSYQGART-GLPQMI 85 (442)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CCChhe
Confidence 36888888888777777777777777776663 554443
No 289
>PF01679 Pmp3: Proteolipid membrane potential modulator; InterPro: IPR000612 Proteolipid membrane potential modulator is an evolutionarily conserved proteolipid in the plasma membrane which, in S. pombe, is transcriptionally regulated by the Spc1 stress MAPK (mitogen-activated protein kinases) pathway. It functions to modulate the membrane potential, particularly to resist high cellular cation concentration. In eukaryotic organisms, stress-activated mitogen-activated protein kinases play crucial roles in transmitting environmental signals that will regulate gene expression for allowing the cell to adapt to cellular stress. Pmp3-like proteins are highly conserved in bacteria, yeast, nematode and plants. Proteins in this entry include the PMP3 as well as several other proteins that have been shown [] to be evolutionary related. These are small proteins of from 52 to 140 amino-acid resiudes that contain two transmembrane domains and belong to the UPF0057 (PMP3) protein family.; GO: 0016021 integral to membrane
Probab=23.12 E-value=1.6e+02 Score=16.75 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Q 033188 71 NGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLAS 108 (125)
Q Consensus 71 ~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l 108 (125)
...+.+.||++=++ |. |..+-+.++.++..+|.+=
T Consensus 6 ~ilai~lPPlaV~~--~~-g~~~~~~inl~Ltl~g~iP 40 (51)
T PF01679_consen 6 IILAIFLPPLAVFL--KK-GCSKDFWINLLLTLLGWIP 40 (51)
T ss_pred HHHHHHcccHHHHH--Hc-CCchhhHHHHHHHHHHHHH
Confidence 45566778887776 43 7777788888888888654
No 290
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=22.82 E-value=4.1e+02 Score=21.40 Aligned_cols=38 Identities=18% Similarity=0.077 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhhhhccch--HHHHHHHHHHHHHHHHHHh
Q 033188 72 GTANFGTMIGAYLCDTYFGR--YNTLGFATVASFLVLASAL 110 (125)
Q Consensus 72 ~~~~~~~~l~G~laDr~lGR--~~~i~~~~~~~~lg~~l~~ 110 (125)
..+....+++-+++|.. |. .-....+.++..++.+++.
T Consensus 174 ~vAI~aGv~a~~l~~~~-~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWF-GFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHhHHHHHHHHHh-CCCCcchHHHHHHHHHHHHHHHH
Confidence 44556666667777764 54 6677888887777777764
No 291
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=22.66 E-value=3.1e+02 Score=19.96 Aligned_cols=50 Identities=8% Similarity=0.319 Sum_probs=25.8
Q ss_pred cCCCHHHHHHHHHHHHHH-HHHHHHHHHHhhhhc-cchHHHHHHHHHHHHHHH
Q 033188 56 FNMKNITAATIINIFNGT-ANFGTMIGAYLCDTY-FGRYNTLGFATVASFLVL 106 (125)
Q Consensus 56 lg~~~~~a~~~~~~~~~~-~~~~~~l~G~laDr~-lGR~~~i~~~~~~~~lg~ 106 (125)
.|.+.-.......+.+.+ ...+..+|..++++. +||+. +.-|.++..+|.
T Consensus 152 ~g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG~ 203 (206)
T TIGR02840 152 LGLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLGV 203 (206)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHHH
Confidence 344444444444333333 333444555556552 36666 777777776663
No 292
>PF11297 DUF3098: Protein of unknown function (DUF3098); InterPro: IPR021448 This bacterial family of proteins has no known function.
Probab=22.14 E-value=1.4e+02 Score=18.30 Aligned_cols=23 Identities=13% Similarity=0.046 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcc
Q 033188 91 RYNTLGFATVASFLVLASALEQR 113 (125)
Q Consensus 91 R~~~i~~~~~~~~lg~~l~~~~~ 113 (125)
.+..+.+|.++..+|.++++..+
T Consensus 7 Nyill~iG~~vIilGfilMsg~~ 29 (69)
T PF11297_consen 7 NYILLAIGIAVIILGFILMSGGG 29 (69)
T ss_pred HHHHHHHHHHHHHHHHHheeCCC
Confidence 45578888889999999998654
No 293
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=21.55 E-value=1.1e+02 Score=19.17 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHhhhhc
Q 033188 69 IFNGTANFGTMIGAYLCDTY 88 (125)
Q Consensus 69 ~~~~~~~~~~~l~G~laDr~ 88 (125)
...+...+...+.|.++||.
T Consensus 83 ~~~~~~l~va~v~g~l~~~~ 102 (105)
T PF13493_consen 83 ITFAVFLVVALVTGYLADRY 102 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444555677789999997
No 294
>PF03818 MadM: Malonate/sodium symporter MadM subunit; InterPro: IPR018402 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM.The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=20.54 E-value=1.9e+02 Score=17.21 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=18.1
Q ss_pred HHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Q 033188 78 TMIGAYLCDTYFGRYNTLGFATVASFLVLASA 109 (125)
Q Consensus 78 ~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~ 109 (125)
.-++.++|||. -|.| +-.|++..++|+++.
T Consensus 24 m~~S~~lS~~L-T~Gr-ihGSAIAI~lGLvLA 53 (60)
T PF03818_consen 24 MWVSYWLSKKL-TRGR-IHGSAIAIVLGLVLA 53 (60)
T ss_pred HHHHHHHHHHH-hCCC-cchHHHHHHHHHHHH
Confidence 34567788874 4444 345666667776554
No 295
>COG3256 NorB Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]
Probab=20.44 E-value=4.4e+02 Score=23.21 Aligned_cols=67 Identities=7% Similarity=-0.035 Sum_probs=36.1
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHh-----hccccceeeeee
Q 033188 54 SVFNMKNITAATIINIFNGTANFGTMIGAYLCDTYFGRYNTLGFATVASFLVLASAL-----EQRVSVIKFYIG 122 (125)
Q Consensus 54 ~~lg~~~~~a~~~~~~~~~~~~~~~~l~G~laDr~lGR~~~i~~~~~~~~lg~~l~~-----~~~~~~~~f~ig 122 (125)
+..|.+..-.-...+......++.|.+++..+.|. |.-+..... ....+|.+..+ ...++...|.+|
T Consensus 299 R~~H~nlavvWIa~~wlaa~lyllP~~~~pk~~~l-~s~~L~~al-~~v~~gs~~g~~~gyl~~l~~~~~F~~G 370 (717)
T COG3256 299 RTVHTNLAVVWIATGWLAAGLYLLPELGGPKFQEL-GSPKLLIAL-FFVVVGSLAGAWLGYLQLLPAPFWFWFG 370 (717)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhhhhhcCchhhhh-ccHHHHHHH-HHHHHHHHHHHHHHHHhccCCccceeec
Confidence 33444444444445555566677788888787774 666554433 33333433332 223466666665
Done!