BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033192
MYRRSSIFDSFTLSPLPYPVLLIIAVALIFLGMSSYFNYESIVESAGQQLSWILFATPVL
LIFLVRWLSSWDSADMFSASSPWDKRRRSHHLPSEGSSPWGVAAFIVLLLILVQYQSRFL
DSWFG

High Scoring Gene Products

Symbol, full name Information P value
AT2G21180 protein from Arabidopsis thaliana 2.4e-21
AT5G19875 protein from Arabidopsis thaliana 1.8e-09
AT2G31940 protein from Arabidopsis thaliana 1.1e-07
AT5G42146 protein from Arabidopsis thaliana 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033192
        (125 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2047062 - symbol:AT2G21180 "AT2G21180" species...   250  2.4e-21   1
TAIR|locus:505006622 - symbol:AT5G19875 "AT5G19875" speci...   138  1.8e-09   1
TAIR|locus:2045203 - symbol:AT2G31940 species:3702 "Arabi...   121  1.1e-07   1
TAIR|locus:1009023456 - symbol:AT5G42146 "AT5G42146" spec...    84  0.00093   1


>TAIR|locus:2047062 [details] [associations]
            symbol:AT2G21180 "AT2G21180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC006264 HOGENOM:HOG000239909 EMBL:AY045652 EMBL:AY059663
            IPI:IPI00540068 PIR:B84598 RefSeq:NP_565499.1 UniGene:At.13704
            UniGene:At.71960 STRING:Q9SKP5 EnsemblPlants:AT2G21180.1
            GeneID:816653 KEGG:ath:AT2G21180 TAIR:At2g21180 eggNOG:NOG249821
            InParanoid:Q9SKP5 OMA:VLLIRWI PhylomeDB:Q9SKP5
            ProtClustDB:CLSN2914966 ArrayExpress:Q9SKP5 Genevestigator:Q9SKP5
            Uniprot:Q9SKP5
        Length = 131

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 61/131 (46%), Positives = 74/131 (56%)

Query:     3 RRSSIFDSFTLSPLPYPXXXXXXXXXXFLGMSSYFNYESIVESAGQQLSWILFATPVLLI 62
             RRSSI DSF+LSPLPYP          FL  S YF+ E   ESA +Q+++ L   P+ LI
Sbjct:     6 RRSSILDSFSLSPLPYPVLLILAVASVFLLSSWYFSLEEAAESAEEQINFALLLIPLFLI 65

Query:    63 FLVRWLSSWDSAD----MFSASSPWDKRRRSHHLPSEG----SSPWGVAAFXXXXXXXXQ 114
              LVRWLSS ++ D    MFS+S     RR ++  P  G    SSPWGVAA         Q
Sbjct:    66 VLVRWLSSMENPDALLGMFSSS-----RRTTYVSPGAGGDGGSSPWGVAALIVLLLVLLQ 120

Query:   115 YQSRFLDSWFG 125
             YQS FL+ W G
Sbjct:   121 YQSSFLEMWSG 131


>TAIR|locus:505006622 [details] [associations]
            symbol:AT5G19875 "AT5G19875" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0006979 "response to oxidative
            stress" evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0006979 EMBL:AY088348 EMBL:BT004721 EMBL:AK119148
            IPI:IPI00547153 RefSeq:NP_568384.1 UniGene:At.31243 IntAct:Q8L9M7
            EnsemblPlants:AT5G19875.1 GeneID:832109 KEGG:ath:AT5G19875
            TAIR:At5g19875 eggNOG:NOG269306 HOGENOM:HOG000239909
            InParanoid:Q8L9M7 OMA:RAGSSPW PhylomeDB:Q8L9M7
            ProtClustDB:CLSN2917680 Genevestigator:Q8L9M7 Uniprot:Q8L9M7
        Length = 123

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 41/124 (33%), Positives = 52/124 (41%)

Query:     2 YRRSSIFDSFTLSPLPYPXXXXXXXXXXF-LGMSSYFNYESIVESAGQQLSWILFATPVL 60
             Y  SS  D  +L   P P          F L  + Y N+ESI+E     L  +   TP+ 
Sbjct:     6 YYGSSYLDYLSL---PNPHLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFTPLF 62

Query:    61 LIFLVRWLSSWDSADMFSASSPWDKRRRSHHLPSEGSSPWGVAAFXXXXXXXXQYQSRFL 120
             L+ LV + S        S   PW ++   H     GSSPWGVAA          YQS F 
Sbjct:    63 LLLLVHFFSGG-----LSFYVPWPEQDSIHRA---GSSPWGVAAVLVLILFMVSYQSDFQ 114

Query:   121 DSWF 124
             + WF
Sbjct:   115 ERWF 118


>TAIR|locus:2045203 [details] [associations]
            symbol:AT2G31940 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006533 HOGENOM:HOG000239909
            IPI:IPI00529462 PIR:A84727 RefSeq:NP_565731.1 UniGene:At.38144
            EnsemblPlants:AT2G31940.1 GeneID:817752 KEGG:ath:AT2G31940
            TAIR:At2g31940 eggNOG:NOG250310 InParanoid:Q9SKA6 OMA:RDSIHRA
            PhylomeDB:Q9SKA6 ProtClustDB:CLSN2917209 ArrayExpress:Q9SKA6
            Genevestigator:Q9SKA6 Uniprot:Q9SKA6
        Length = 120

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 33/110 (30%), Positives = 46/110 (41%)

Query:    15 PLPYPXXXXXXXXXXFLGMSSYFNYESIVESAGQQLSWILFATPVLLIFLVRWLSSWDSA 74
             P+P            F+ +S Y +YE ++E    Q    L A+P+LL+  V +LS     
Sbjct:    10 PVPLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQGV 69

Query:    75 DMFSASSPWDKRRRSHHLPSEGSSPWGVAAFXXXXXXXXQYQSRFLDSWF 124
                  S      R S  L   G +PWGVA           YQS+F + WF
Sbjct:    70 GGMMTSLIHLNERES--LYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWF 117


>TAIR|locus:1009023456 [details] [associations]
            symbol:AT5G42146 "AT5G42146" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB017067
            EMBL:DQ487613 EMBL:BT030652 IPI:IPI00657148 RefSeq:NP_001031993.1
            UniGene:At.63339 EnsemblPlants:AT5G42146.1 GeneID:3771399
            KEGG:ath:AT5G42146 TAIR:At5g42146 eggNOG:NOG254056
            HOGENOM:HOG000090445 OMA:WFIKERR PhylomeDB:Q2V323
            ProtClustDB:CLSN2715938 Genevestigator:Q2V323 Uniprot:Q2V323
        Length = 137

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 29/113 (25%), Positives = 43/113 (38%)

Query:    12 TLSPLPYPXXXXXXXXXXFLGMSSYFNYESIVESAGQQLSWILFATPVLLIFLVRWLSSW 71
             T S  P             L +SSY  Y+  VE     L   +   P+L +F++  LS  
Sbjct:    24 TSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSFV 83

Query:    72 DSADMFSASSPWDKRRRSHHLPSEGSSPWGVAAFXXXXXXXXQYQSRFLDSWF 124
                 +F +S    +  ++  L  EG+ PWGV             QS F   W+
Sbjct:    84 HRL-LFKSSYSV-RANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWY 134


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.134   0.449    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125       107   0.00091  102 3  11 22  0.39    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  138 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.17u 0.10s 10.27t   Elapsed:  00:00:01
  Total cpu time:  10.17u 0.10s 10.27t   Elapsed:  00:00:01
  Start:  Fri May 10 17:48:35 2013   End:  Fri May 10 17:48:36 2013

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