Query 033193
Match_columns 125
No_of_seqs 104 out of 646
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 10:57:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033193.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033193hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1726 HVA22/DP1 gene product 100.0 8.5E-30 1.8E-34 199.9 6.1 99 2-100 11-111 (225)
2 PF03134 TB2_DP1_HVA22: TB2/DP 100.0 8.5E-29 1.8E-33 169.9 8.5 81 2-82 14-94 (94)
3 KOG1725 Protein involved in me 99.9 2.7E-28 5.8E-33 186.9 6.5 96 1-96 66-161 (186)
4 COG5052 YOP1 Protein involved 99.8 2.8E-21 6.1E-26 147.1 5.7 101 2-102 68-170 (186)
5 KOG1726 HVA22/DP1 gene product 79.0 6.7 0.00014 31.3 5.8 82 19-100 97-178 (225)
6 PF14975 DUF4512: Domain of un 36.3 33 0.00071 23.6 2.2 18 71-88 12-29 (88)
7 KOG0365 Beta subunit of farnes 34.8 35 0.00075 29.5 2.5 19 19-37 96-114 (423)
8 PF03620 IBV_3C: IBV 3C protei 33.8 22 0.00048 24.5 1.0 43 58-102 49-92 (93)
9 COG5415 Predicted integral mem 31.5 1.6E+02 0.0035 23.7 5.6 75 19-98 36-110 (251)
10 KOG3047 Predicted transcriptio 30.4 21 0.00046 26.6 0.5 45 75-119 25-86 (157)
11 COG2832 Uncharacterized protei 26.7 1.7E+02 0.0037 21.2 4.6 55 28-87 6-65 (119)
12 PF02453 Reticulon: Reticulon; 22.9 28 0.00061 24.9 0.0 40 46-99 127-166 (169)
13 PF08831 MHCassoc_trimer: Clas 22.4 69 0.0015 21.3 1.8 14 20-33 45-58 (72)
14 PF13260 DUF4051: Protein of u 21.8 1.1E+02 0.0024 19.0 2.5 14 27-40 6-19 (54)
No 1
>KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms]
Probab=99.96 E-value=8.5e-30 Score=199.85 Aligned_cols=99 Identities=27% Similarity=0.633 Sum_probs=95.3
Q ss_pred chhhHHHHHHHhhC--CChhhhhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 033193 2 LLYPLYASVVAIES--PSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVR 79 (125)
Q Consensus 2 ~lyPay~S~kal~~--~~~~~~~~WL~YWiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~ 79 (125)
.+||||+|+|++++ ++.+++.+|++|||++|+++++|.++|.+++|+|+|+++|++|++||.+|.++||.++|+++++
T Consensus 11 ~~yPAy~tyKavk~~~~~i~el~~W~~YWIv~A~~t~~e~~~d~~lsw~P~Y~e~Kl~fv~wL~~p~t~G~~~vY~~f~~ 90 (225)
T KOG1726|consen 11 YAYPAYATYKAVKSNRKDIRELLRWMMYWIVFAALTVFETLTDFLLSWFPFYSEFKLAFVIWLLSPATKGASYVYRKFLR 90 (225)
T ss_pred HHhHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccccCccHHHHHHHhh
Confidence 57999999999999 6678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhcccccccccccCCC
Q 033193 80 QQIRQYRGGKDHHQHQHRKSS 100 (125)
Q Consensus 80 P~l~~~e~~id~~l~~~r~~~ 100 (125)
|++.++|++||+.+.+.|.++
T Consensus 91 p~ls~~E~eid~~l~~~k~~~ 111 (225)
T KOG1726|consen 91 PFLSKHEEEIDRMLVEAKERV 111 (225)
T ss_pred hhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999998754
No 2
>PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein which in human is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein (e.g. Q07764 from SWISSPROT), which is thought to be a regulatory protein.
Probab=99.96 E-value=8.5e-29 Score=169.90 Aligned_cols=81 Identities=48% Similarity=1.036 Sum_probs=78.8
Q ss_pred chhhHHHHHHHhhCCChhhhhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhH
Q 033193 2 LLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQ 81 (125)
Q Consensus 2 ~lyPay~S~kal~~~~~~~~~~WL~YWiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~P~ 81 (125)
++||+|+|+|+++++++++.++||+||+++|+++++|.+++.+++|+|+|+++|+++++||++|+++||+++|+++++|+
T Consensus 14 ~~yP~~~s~kal~~~~~~~~~~wL~YWiv~~~~~~~e~~~~~~l~~iP~y~~~K~~~~~wL~~p~~~Ga~~iy~~~i~P~ 93 (94)
T PF03134_consen 14 ILYPAYKSFKALKSKDKKDLKQWLTYWIVYGLFTLFESFLDFILSWIPFYYEFKLLFLVWLQLPQFQGAEYIYDKFIRPF 93 (94)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHcCCCCcHHHHHHHHcccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred H
Q 033193 82 I 82 (125)
Q Consensus 82 l 82 (125)
+
T Consensus 94 ~ 94 (94)
T PF03134_consen 94 L 94 (94)
T ss_pred C
Confidence 4
No 3
>KOG1725 consensus Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2.7e-28 Score=186.90 Aligned_cols=96 Identities=50% Similarity=0.902 Sum_probs=92.1
Q ss_pred CchhhHHHHHHHhhCCChhhhhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHh
Q 033193 1 MLLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQ 80 (125)
Q Consensus 1 ~~lyPay~S~kal~~~~~~~~~~WL~YWiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~P 80 (125)
+++||+|+|++|+|+++++|+++||+||++||++.++|.+.+.+++|+|+||++|++|++||.+|+++||..+|+++++|
T Consensus 66 g~~yP~y~Sv~aIes~~k~dD~~wL~YWivys~lslie~~~~~il~~iP~y~~~K~~fl~~l~lP~~~Ga~~iY~~~vrp 145 (186)
T KOG1725|consen 66 GFLYPAYASVKAIESPSKDDDTQWLTYWIVYSILSLVEFFSVAILSWIPFYWYAKLIFLLWLVLPQFNGAAIIYNHIVRP 145 (186)
T ss_pred HHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHhccCCCCceeeechhhhh
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccccccc
Q 033193 81 QIRQYRGGKDHHQHQH 96 (125)
Q Consensus 81 ~l~~~e~~id~~l~~~ 96 (125)
++.++..++|+..+-.
T Consensus 146 ~~~~~~~~~~~~~~~~ 161 (186)
T KOG1725|consen 146 FFLKHSREIDDIEDAN 161 (186)
T ss_pred hhhhhhhhhhhhhhcc
Confidence 9999999999887644
No 4
>COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion]
Probab=99.84 E-value=2.8e-21 Score=147.06 Aligned_cols=101 Identities=26% Similarity=0.514 Sum_probs=92.3
Q ss_pred chhhHHHHHHHhhCCChhhhhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhH
Q 033193 2 LLYPLYASVVAIESPSKVDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQ 81 (125)
Q Consensus 2 ~lyPay~S~kal~~~~~~~~~~WL~YWiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~P~ 81 (125)
+..|++.|.++++..++.+.+||++||+|+++.+++|.+...+++|+|+|+..|.+|++|+..|+++||..+|+++++|.
T Consensus 68 ~~lP~~~~l~a~~~~n~~dd~q~l~ywmV~~~lsaie~~s~~il~~vP~Y~~~K~vFllw~~~prt~GA~~IY~~~i~p~ 147 (186)
T COG5052 68 FSLPAQLSLVAFYTLNFMDDTQLLTYWMVFGFLSAIEKYSGAILSKVPFYWTLKNVFLLWLLLPRTEGARIIYDDIIAPD 147 (186)
T ss_pred HHccHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhccccCceeeeHHhhcccc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcc-cccccccc-cCCCCC
Q 033193 82 IRQYRGG-KDHHQHQH-RKSSPT 102 (125)
Q Consensus 82 l~~~e~~-id~~l~~~-r~~~~~ 102 (125)
+++|..+ ||+.++.. ||+++.
T Consensus 148 ~s~~~~~~IektV~~~~~A~a~~ 170 (186)
T COG5052 148 VSDHGFRTIEKTVKNGTKASAAV 170 (186)
T ss_pred ccHHHHHHHHHHHHhhccccHHH
Confidence 9998777 99988544 444433
No 5
>KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms]
Probab=78.99 E-value=6.7 Score=31.34 Aligned_cols=82 Identities=7% Similarity=-0.011 Sum_probs=73.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhHHHhhhcccccccccccC
Q 033193 19 VDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHRK 98 (125)
Q Consensus 19 ~~~~~WL~YWiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~P~l~~~e~~id~~l~~~r~ 98 (125)
++...-+.+|....++..++.++...+.+-+.|..=+..+..|...|+.+++...++.-..|-.+.....+-+.+++..+
T Consensus 97 E~eid~~l~~~k~~~~~~a~~~~~r~l~~~~~~~~~a~~~~~~~~tp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vq 176 (225)
T KOG1726|consen 97 EEEIDRMLVEAKERVYDAAVSILKRALNYAQTYALEAAVFSQGQLTPRLQRSSSDQDLTTIPEESGKKAPDLDVLENEVQ 176 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhhhhhhcCccccccccCCcccchhhhc
Confidence 55677889999999999999999999999999999999999999999999999999999999888888888888877665
Q ss_pred CC
Q 033193 99 SS 100 (125)
Q Consensus 99 ~~ 100 (125)
.+
T Consensus 177 ~~ 178 (225)
T KOG1726|consen 177 SS 178 (225)
T ss_pred cC
Confidence 43
No 6
>PF14975 DUF4512: Domain of unknown function (DUF4512)
Probab=36.33 E-value=33 Score=23.62 Aligned_cols=18 Identities=22% Similarity=0.571 Sum_probs=14.8
Q ss_pred HHHHHHHHHhHHHhhhcc
Q 033193 71 AFIYERFVRQQIRQYRGG 88 (125)
Q Consensus 71 ~~lY~~~i~P~l~~~e~~ 88 (125)
.+||++||+|++-++-+.
T Consensus 12 LwIykkFlqP~i~~~~sp 29 (88)
T PF14975_consen 12 LWIYKKFLQPYIYPFWSP 29 (88)
T ss_pred HHHHHHHHHHHHHHHhCc
Confidence 368999999999887765
No 7
>KOG0365 consensus Beta subunit of farnesyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=34.79 E-value=35 Score=29.46 Aligned_cols=19 Identities=37% Similarity=0.865 Sum_probs=14.7
Q ss_pred hhhhHHHHHHHHHHHHHHH
Q 033193 19 VDDEQWLAYWILYSFLTLT 37 (125)
Q Consensus 19 ~~~~~WL~YWiv~al~~~~ 37 (125)
+..+.|++||++=++=.+-
T Consensus 96 DASR~Wm~YWil~sl~lL~ 114 (423)
T KOG0365|consen 96 DASRPWMCYWILNSLALLD 114 (423)
T ss_pred ccCcchhHHHHHHHHHHhc
Confidence 3457899999998876554
No 8
>PF03620 IBV_3C: IBV 3C protein; InterPro: IPR005296 These proteins are the product of ORF 3C from Infectious bronchitis virus. Currently, the function of this protein remains unknown.
Probab=33.75 E-value=22 Score=24.52 Aligned_cols=43 Identities=19% Similarity=0.369 Sum_probs=31.0
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHhHHHhhhccccccc-ccccCCCCC
Q 033193 58 LAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQ-HQHRKSSPT 102 (125)
Q Consensus 58 fllwL~~P~~~GA~~lY~~~i~P~l~~~e~~id~~l-~~~r~~~~~ 102 (125)
--.|...|..+|..++|...-.. +...+++++.+ +|+-.++.|
T Consensus 49 wytw~v~pgak~~afvY~~tygk--kln~pelE~VivneFPkNg~n 92 (93)
T PF03620_consen 49 WYTWVVVPGAKGTAFVYNHTYGK--KLNNPELEAVIVNEFPKNGWN 92 (93)
T ss_pred hhheeeccCCceeEEeecccccc--ccCchhhhhhhhhhcccCCCC
Confidence 34688999999999999866555 55667777776 556555554
No 9
>COG5415 Predicted integral membrane metal-binding protein [General function prediction only]
Probab=31.47 E-value=1.6e+02 Score=23.74 Aligned_cols=75 Identities=11% Similarity=0.063 Sum_probs=50.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhHHHhhhcccccccccccC
Q 033193 19 VDDEQWLAYWILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHRK 98 (125)
Q Consensus 19 ~~~~~WL~YWiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~P~l~~~e~~id~~l~~~r~ 98 (125)
....+|+.=-+|+++-..+-... .+..--|.|.-.-.+.+.-|. .||-|+++-.+.-+.+.+..++...++.+|+
T Consensus 36 s~l~~~~~r~tv~slAl~~l~~S-~iy~~~~~y~~~~~It~~llg----s~slymfrwal~~lye~r~~r~~~~L~kLra 110 (251)
T COG5415 36 SILSQWQSRLTVYSLALTVLALS-YIYWEYHGYRPYLVITALLLG----SGSLYMFRWALTKLYEFRNNRRLRKLAKLRA 110 (251)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH-HHHhhccccchhHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 45678999888888766654321 222223545322222222222 5999999999999999999999999988887
No 10
>KOG3047 consensus Predicted transcriptional regulator UXT [Transcription]
Probab=30.44 E-value=21 Score=26.59 Aligned_cols=45 Identities=24% Similarity=0.288 Sum_probs=28.2
Q ss_pred HHHHHhHHHhhhccccccccccc--------------CCCCC---CCCCCccceeeeeccCC
Q 033193 75 ERFVRQQIRQYRGGKDHHQHQHR--------------KSSPT---GTGKGKNKFVDFIMPKK 119 (125)
Q Consensus 75 ~~~i~P~l~~~e~~id~~l~~~r--------------~~~~~---~~~~~~~~~~~~~~~~~ 119 (125)
..+|+|-+.+-+...|+..++.- ++.++ -.+-|-|+|||+..|..
T Consensus 25 edVih~di~k~~d~~dKl~eQ~aeY~kLk~t~eRL~eaahkel~~ktdLGcnfFmdi~VpDT 86 (157)
T KOG3047|consen 25 EDVIHPDIAKEEDEFDKLQEQCAEYAKLKFTCERLLEAAHKELEGKTDLGCNFFMDIEVPDT 86 (157)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhccccccceeeEeeecCCc
Confidence 34666766666666665554322 23333 34558999999999864
No 11
>COG2832 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.70 E-value=1.7e+02 Score=21.23 Aligned_cols=55 Identities=20% Similarity=0.361 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHhcCCCCcHHHHHH-----HHHHhHHHhhhc
Q 033193 28 WILYSFLTLTEMVLQPVLEWIPIWYSVKLVLAAWLVLPQFRGAAFIYE-----RFVRQQIRQYRG 87 (125)
Q Consensus 28 Wiv~al~~~~E~~~~~~~~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~-----~~i~P~l~~~e~ 87 (125)
|++.|+..+.--+...++..+|-=-.+=++..++. +++...++ +...|+++.+++
T Consensus 6 ~i~iGfl~l~LGIiGifLPlLPTTPFlLLaa~cFa-----RsSpRf~~WLl~~~~fg~~v~~~~e 65 (119)
T COG2832 6 YIILGFLSLALGIIGIFLPLLPTTPFLLLAAACFA-----RSSPRFHAWLLRHKYFGPYVRDWRE 65 (119)
T ss_pred HHHHHHHHHHHHHHHhcCcccCCcHHHHHHHHHHH-----cCCcHHHHHHHcCchhhHHHHHHHH
Confidence 67888888888888788888887666666655554 34444444 445556655543
No 12
>PF02453 Reticulon: Reticulon; InterPro: IPR003388 Eukaryotic proteins of the reticulon (RTN) family all share an association with the endoplasmic reticulum (ER). Whereas amino-terminal regions are not related to one another, all reticulon proteins share a 200 amino acid residue region of sequence similarity at the C-terminal. This region contains two large hydrophobic regions separated by a 66 residue hydrophilic segment. The conserved hydrophobic C-terminal portion has been shown to play an essential role in the association of reticulons with the ER membrane. The hydrophobic portions are supposed to be membrane-embedded and the hydrophilic 66 residue localized to the lumenal/extracellular face of the membrane. Most reticulons have a di-lysine ER retention motif at the C-terminal. Because of their likely association with the rough as well as the smooth ER, the reticulons might play some role in transport processes or in regulation of intracellular calcium levels. It has been suggested that the reticulons may be serving as ER-associated channel-like complexes [, , , ].; GO: 0005783 endoplasmic reticulum; PDB: 2KO2_A 2JV5_A 2G31_A.
Probab=22.88 E-value=28 Score=24.87 Aligned_cols=40 Identities=13% Similarity=0.277 Sum_probs=0.0
Q ss_pred hccchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhHHHhhhcccccccccccCC
Q 033193 46 EWIPIWYSVKLVLAAWLVLPQFRGAAFIYERFVRQQIRQYRGGKDHHQHQHRKS 99 (125)
Q Consensus 46 ~~iPfY~~~Kl~fllwL~~P~~~GA~~lY~~~i~P~l~~~e~~id~~l~~~r~~ 99 (125)
+++++..++-+++++-+..| +..++|++.||+.++..++.
T Consensus 127 ~~~s~~~L~~l~~~~~f~~P--------------~ly~~~~~~Id~~~~~~~~~ 166 (169)
T PF02453_consen 127 SWFSFLTLLYLGVLGAFTVP--------------KLYEKYQEEIDQYVAKVKEK 166 (169)
T ss_dssp ------------------------------------------------------
T ss_pred HHcCHHHHHHHHHHHHHhhH--------------HHHHHHHHHHHHHHHHHHHH
Confidence 44555555555554444444 24578999999999877653
No 13
>PF08831 MHCassoc_trimer: Class II MHC-associated invariant chain trimerisation domain; InterPro: IPR011988 This entry represents the trimerisation domain of the MHC class II-associated invariant chain (Ii). Ii plays a critical role in the assembly of the MHC, as well as in MHC II antigen processing by stabilising peptide-free class II alpha/beta heterodimers in a complex soon after their synthesis and directing transport of the complex from the endoplasmic reticulum to compartments where peptide loading of class II takes place []. In antigen-presenting cells (APCs), loading of MHC II molecules with peptides is regulated by Ii, which blocks MHC II antigen-binding sites in pre-endosomal compartments []. Several molecules then act upon MHC II molecules in endosomes to facilitate peptide loading: Ii-degrading proteases, the peptide exchange factor, human leukocyte antigen-DM (HLA-DM), and its modulator, HLA-DO (DO). The Invariant chain contains a single transmembrane domain. Ii first assembles into a trimer and then associates with three class II alpha/beta MHC heterodimers. Although the membrane-proximal region of the Ii luminal domain is structurally disordered, the C-terminal segment of the luminal domain is largely alpha-helical and contains a major interaction site for the Ii trimer []. More information about these proteins can be found at Protein of the Month: MHC [].; GO: 0042289 MHC class II protein binding, 0006886 intracellular protein transport, 0006955 immune response, 0019882 antigen processing and presentation, 0016020 membrane; PDB: 1IIE_C.
Probab=22.41 E-value=69 Score=21.28 Aligned_cols=14 Identities=29% Similarity=1.004 Sum_probs=11.3
Q ss_pred hhhHHHHHHHHHHH
Q 033193 20 DDEQWLAYWILYSF 33 (125)
Q Consensus 20 ~~~~WL~YWiv~al 33 (125)
+...|+.+|.+|-.
T Consensus 45 ~FEsWM~~WLlFqM 58 (72)
T PF08831_consen 45 SFESWMHQWLLFQM 58 (72)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46789999998854
No 14
>PF13260 DUF4051: Protein of unknown function (DUF4051)
Probab=21.80 E-value=1.1e+02 Score=19.02 Aligned_cols=14 Identities=29% Similarity=0.738 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHH
Q 033193 27 YWILYSFLTLTEMV 40 (125)
Q Consensus 27 YWiv~al~~~~E~~ 40 (125)
||||.-.+.++.++
T Consensus 6 ywivli~lv~~gy~ 19 (54)
T PF13260_consen 6 YWIVLIVLVVVGYF 19 (54)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887776666544
Done!