BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033199
(125 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
gi|131398|sp|P27202.1|PSBR_ARATH RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|16447|emb|CAA39441.1| photosystem II 10 kDa polypeptide [Arabidopsis thaliana]
gi|3152571|gb|AAC17052.1| Match to photosystem II 10kDa polypeptide gb|X55970. ESTs
gb|Z17693, gb|N37616, gb|T41858, gb|T88021, gb|R37531,
gb|T04679, gb|N37520, gb|N64965, gb|Z17592 and
gb|N65338, gb|N37466 and gb|T45400 come from this gene
[Arabidopsis thaliana]
gi|17979203|gb|AAL49840.1| putative photosystem II polypeptide protein [Arabidopsis thaliana]
gi|20465469|gb|AAM20194.1| putative photosystem II polypeptide [Arabidopsis thaliana]
gi|21536748|gb|AAM61080.1| photosystem II polypeptide, putative [Arabidopsis thaliana]
gi|110740828|dbj|BAE98511.1| PSII-R protein [Arabidopsis thaliana]
gi|332198075|gb|AEE36196.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/140 (75%), Positives = 116/140 (82%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+GV Y++VDKYGANVDGYSPIYNEN+WS SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAG+LAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|967968|gb|AAA74957.1| photosystem II 10kDa polypeptide [Brassica rapa subsp. campestris]
Length = 141
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 115/141 (81%), Gaps = 16/141 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 104
DLR+GV Y+FVDKYGANVDGYSPIYNE++WS SGDVY GG TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 105 TLAGLLAGGALLVYNTSALAQ 125
TLAG+LAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 114/140 (81%), Gaps = 15/140 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAAS+M SS++LKPA FTVEK + RGLPSL + +SFKIVA G KIKTDKP+GVNG MD
Sbjct: 1 MAASLMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMD 60
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+G VY+FVDKYGANVDGYSPIYNE++WS SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 120
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAG+LAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|118489740|gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 112/137 (81%), Gaps = 13/137 (9%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLRE 60
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR+
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKIKTDTPYGTGGGMNLRD 59
Query: 61 G------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAG 108
G VYQ+VDKYGANVDGYSPIYN ++WSP+GDVY GG TGL IWAVTLAG
Sbjct: 60 GLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAG 119
Query: 109 LLAGGALLVYNTSALAQ 125
+LAGGALLVY+TSALAQ
Sbjct: 120 ILAGGALLVYSTSALAQ 136
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/141 (71%), Positives = 113/141 (80%), Gaps = 16/141 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM S ++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 104
DLR+GV Y+FVD+YGANVDGYSPIYNE +WS SGDVY GG TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 120
Query: 105 TLAGLLAGGALLVYNTSALAQ 125
TLAG+LAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489823|gb|ABK96711.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 112/138 (81%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+G VYQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGL IWAVTLA
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLA 119
Query: 108 GLLAGGALLVYNTSALAQ 125
G+LAGGALLVY+TSALAQ
Sbjct: 120 GILAGGALLVYSTSALAQ 137
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassica rapa subsp.
pekinensis]
Length = 137
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 111/137 (81%), Gaps = 15/137 (10%)
Query: 4 SVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMDLRE 60
SVM SS++LKPA FTVEK + RGLPSL + +SFKIVA G KIKTDKP+GVNG MDLR+
Sbjct: 1 SVMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD 60
Query: 61 G------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAG 108
G VY+FVDKYGANVDGYSPIYNE++WS SGDVY GG TGLAIWAVTLAG
Sbjct: 61 GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAG 120
Query: 109 LLAGGALLVYNTSALAQ 125
+LAGGALLVYNTSALAQ
Sbjct: 121 ILAGGALLVYNTSALAQ 137
>gi|284520974|gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Jatropha curcas]
Length = 137
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 113/138 (81%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MA SVMAS +SLKP+PF+V+KS+ RGLP L++ +FK+ A GGK IKTDKPYG+ GGM+LR
Sbjct: 1 MATSVMAS-VSLKPSPFSVQKSSVRGLPKLSRRAFKVEAGGGKKIKTDKPYGIGGGMNLR 59
Query: 60 ------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+GVYQ+VDKYGANVDGYSPIYN ++WSP+GDVY GG TGLAIWAVTL
Sbjct: 60 NGLDASGRKATGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGTTGLAIWAVTLL 119
Query: 108 GLLAGGALLVYNTSALAQ 125
G+LAGGALLVYNTSALAQ
Sbjct: 120 GILAGGALLVYNTSALAQ 137
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis hypogaea]
Length = 129
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 108/129 (83%), Gaps = 15/129 (11%)
Query: 12 LKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREG------- 61
LKPAPFT E+S+ RG+PSL++ +SFK+VA GGK IKTDKPYG+NGGM+LR+G
Sbjct: 1 LKPAPFTAERSSVRGIPSLSRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRK 60
Query: 62 -----VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALL 116
VYQFVDKYGANVDGYSPIY++ DWSP+GDVYTGG TGLAIWAVTL GLLAGGALL
Sbjct: 61 GKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGALL 120
Query: 117 VYNTSALAQ 125
VYNTSAL+Q
Sbjct: 121 VYNTSALSQ 129
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
gi|118487848|gb|ABK95747.1| unknown [Populus trichocarpa]
gi|222875313|gb|EEF12444.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
Length = 137
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 112/138 (81%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+G VYQ+VDKYGANVDGYSPIYN ++WSP+GDVY GG TGL IWAVTLA
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLA 119
Query: 108 GLLAGGALLVYNTSALAQ 125
G+LAGGALLVY+TSALAQ
Sbjct: 120 GILAGGALLVYSTSALAQ 137
>gi|224115372|ref|XP_002317015.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
gi|118488264|gb|ABK95951.1| unknown [Populus trichocarpa]
gi|222860080|gb|EEE97627.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
Length = 137
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/138 (71%), Positives = 111/138 (80%), Gaps = 14/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS L+LKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LNLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 ------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+GVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGL IWAVTLA
Sbjct: 60 NGLDASGRKPRGKGVYQYVDKYGANVDGYSPIYNADEWSPSGDVYAGGKTGLLIWAVTLA 119
Query: 108 GLLAGGALLVYNTSALAQ 125
G+LAGGALLVY TSALAQ
Sbjct: 120 GILAGGALLVYTTSALAQ 137
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Short=PII10; Flags: Precursor
gi|22669|emb|CAA49693.1| NtpII10 [Nicotiana tabacum]
Length = 136
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 111/140 (79%), Gaps = 19/140 (13%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+GV YQFVDKYGANVDGYSPIYN +DWSPSGDVY GG TGLAIWAVT
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVT 116
Query: 106 LAGLLAGGALLVYNTSALAQ 125
L G+LAGGALLV+NTSALAQ
Sbjct: 117 LVGILAGGALLVFNTSALAQ 136
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
gi|297333606|gb|EFH64024.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
Length = 133
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 109/133 (81%), Gaps = 15/133 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKAAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+GV Y++VDKYGANVDGYSPIYNEN+WS SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 106 LAGLLAGGALLVY 118
LAG+LAGGALLVY
Sbjct: 121 LAGILAGGALLVY 133
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor
gi|21489|emb|CAA28450.1| ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa polypeptide [Solanum tuberosum]
Length = 138
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 113/140 (80%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+GV YQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LVGILAGGALLVYNTSALAQ 138
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 113/140 (80%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+G VYQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT
Sbjct: 59 LRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LVGILAGGALLVYNTSALAQ 138
>gi|350537547|ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum]
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1217642|emb|CAA65231.1| PSII polypeptide [Solanum lycopersicum]
Length = 138
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 111/140 (79%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+GV YQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LLGILAGGALLVYNTSALAQ 138
>gi|351722140|ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 116/140 (82%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA GGK IKTDKPYG+NGGM
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMA 59
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LREGV YQFVDKYGANVDGYSPIY+ DWSP+GDVY GG TGLAIWAVT
Sbjct: 60 LREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119
Query: 106 LAGLLAGGALLVYNTSALAQ 125
L GLLAGGALLVYNTSALAQ
Sbjct: 120 LLGLLAGGALLVYNTSALAQ 139
>gi|351722402|ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycine max]
gi|255626523|gb|ACU13606.1| unknown [Glycine max]
Length = 138
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 114/139 (82%), Gaps = 15/139 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA G KIKTDKPYG+NGGM L
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGKKIKTDKPYGINGGMAL 59
Query: 59 REG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
R+G VYQFVDKYGANVDGYSPIY+ DWSP+GDVY GG TGLAIWAVTL
Sbjct: 60 RDGTDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTL 119
Query: 107 AGLLAGGALLVYNTSALAQ 125
GLLAGGALLVYNTSAL Q
Sbjct: 120 LGLLAGGALLVYNTSALVQ 138
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 104/131 (79%), Gaps = 16/131 (12%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGV---- 62
LSLKP FT+EK + +GLPSL ++S FK+VA+G K+KTDKPYG+NG M LR+GV
Sbjct: 1 LSLKPT-FTLEKISVKGLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDASG 59
Query: 63 --------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGA 114
YQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVTL G+LAGGA
Sbjct: 60 RKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGA 119
Query: 115 LLVYNTSALAQ 125
LLVYNTSALAQ
Sbjct: 120 LLVYNTSALAQ 130
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis]
gi|223530550|gb|EEF32429.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis]
Length = 138
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 118/139 (84%), Gaps = 15/139 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAA-RGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MA+SVMAS +SLKP+PFTV+KS++ RGLP+L++ +F+I A GGK IKTDKPYG+ GGM+L
Sbjct: 1 MASSVMAS-VSLKPSPFTVQKSSSVRGLPTLSRRTFRIEASGGKKIKTDKPYGIGGGMEL 59
Query: 59 R------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
R +GVYQFVDKYGANVDGYSPIYN ++WSP+GDVY GGATGLAIWA+TL
Sbjct: 60 RNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITL 119
Query: 107 AGLLAGGALLVYNTSALAQ 125
AGLLAGGALLVYNTSALAQ
Sbjct: 120 AGLLAGGALLVYNTSALAQ 138
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
Length = 139
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 116/140 (82%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPAPFTVEKSA RGLPSL+++S FK+VA GGK IKTDKPYG+NGGM+
Sbjct: 1 MASSVMAS-VSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMN 59
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L EGV YQFVDKYG NVDGYSPIYN DWSPSGDVY GG TGLAIWAVT
Sbjct: 60 LVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAVT 119
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAGLLAGGALLVYNTSALAQ
Sbjct: 120 LAGLLAGGALLVYNTSALAQ 139
>gi|224115278|ref|XP_002332205.1| predicted protein [Populus trichocarpa]
gi|222875312|gb|EEF12443.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 112/138 (81%), Gaps = 15/138 (10%)
Query: 3 ASVMASSLSLKPAPFTVEK-SAARGLPSLAK-TSFKIVA-KGGKIKTDKPYGVNGGMDLR 59
+SVMA S+SLKPAPFTV+K S+ RGLP+LA+ +SFK+ A + K TD+PYG+NGGMDLR
Sbjct: 4 SSVMAPSISLKPAPFTVKKPSSVRGLPTLARRSSFKVEASRTRKTNTDQPYGINGGMDLR 63
Query: 60 EGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
EGV YQFVDKYGANVDGYSPIYN NDWSPSGDVY GG TGL IWAVTLA
Sbjct: 64 EGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYNTNDWSPSGDVYVGGKTGLLIWAVTLA 123
Query: 108 GLLAGGALLVYNTSALAQ 125
GLLAGGALLVY+TSALAQ
Sbjct: 124 GLLAGGALLVYSTSALAQ 141
>gi|225462227|ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera]
gi|147789486|emb|CAN71762.1| hypothetical protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product [Vitis vinifera]
Length = 139
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 111/140 (79%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM SSLSLKP+PF+VE+ A RGLPSLA++S F++ A GGK IKTDKPYG+ GGM
Sbjct: 1 MAASVM-SSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMK 59
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L +G VYQFVDKYGANVDGYSPIY+ ++WSP GDVY GG TGL IWAVT
Sbjct: 60 LSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVT 119
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAGLL GGALLVYNTSALAQ
Sbjct: 120 LAGLLLGGALLVYNTSALAQ 139
>gi|449460036|ref|XP_004147752.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449460038|ref|XP_004147753.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449502146|ref|XP_004161556.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449502150|ref|XP_004161557.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 138
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/140 (74%), Positives = 114/140 (81%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSF--KIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM +S+SLKPAPFTVEKSA+ GLPSLA+ SF K+VA GGK IKTDKPYG+NG M+
Sbjct: 1 MAASVM-TSVSLKPAPFTVEKSAS-GLPSLARKSFSFKVVASGGKKIKTDKPYGINGSMN 58
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+G VYQFVDKYGANVDGYSPIY+ DWSP+GDVY GG TGLAIWA T
Sbjct: 59 LRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYVGGTTGLAIWAAT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAGLLAGGALLVYNTSAL Q
Sbjct: 119 LAGLLAGGALLVYNTSALVQ 138
>gi|388503488|gb|AFK39810.1| unknown [Lotus japonicus]
gi|388512023|gb|AFK44073.1| unknown [Lotus japonicus]
Length = 139
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 113/140 (80%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPA F++EKS+ RGLPSL+++S F++VA GGK IKTD PYG GGM+
Sbjct: 1 MASSVMAS-VSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMN 59
Query: 58 LR------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR +GVYQ+VDKYGANVDGYSPIY+ DWSP+GDVY GG TGLAIWAVT
Sbjct: 60 LRNGVDASGRKPRGKGVYQYVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVT 119
Query: 106 LAGLLAGGALLVYNTSALAQ 125
L GLLAGGALLVYNTSAL+Q
Sbjct: 120 LLGLLAGGALLVYNTSALSQ 139
>gi|146454590|gb|ABQ41961.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 121
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 90/110 (81%), Gaps = 14/110 (12%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREG------ 61
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGR 60
Query: 62 ------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
VYQFVDKYGANVDGYSPIY+ NDWSPSGDVY GG+TGLAIWAVT
Sbjct: 61 KPRGKGVYQFVDKYGANVDGYSPIYDTNDWSPSGDVYVGGSTGLAIWAVT 110
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/141 (67%), Positives = 107/141 (75%), Gaps = 16/141 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 104
DLR+GV Y+FVDKYGANVDGYSPIYNE +W+P GD Y GG TGL WA
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKGGVTGLVFWAA 120
Query: 105 TLAGLLAGGALLVYNTSALAQ 125
TLAGLL GG L+VYNT ALAQ
Sbjct: 121 TLAGLLGGGPLVVYNTGALAQ 141
>gi|33694227|gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
Length = 136
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 109/138 (78%), Gaps = 15/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-VSLKPTPFMVEKSSVRGLPNLSR-PFRVVASGVKKIKTDTPYGTGGGMDLP 58
Query: 60 ------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+GVYQFVDKYGANVDGYSPIY DWSP+GDVYTGG TGLAIWAVTLA
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLA 118
Query: 108 GLLAGGALLVYNTSALAQ 125
GLLAGGALLVYNTSAL+Q
Sbjct: 119 GLLAGGALLVYNTSALSQ 136
>gi|146454594|gb|ABQ41963.1| photosystem II 10 kDa polypeptide [Sonneratia ovata]
gi|146454596|gb|ABQ41964.1| photosystem II 10 kDa polypeptide [Sonneratia apetala]
Length = 121
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 90/110 (81%), Gaps = 14/110 (12%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREG------ 61
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 62 ------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
VYQFVDKYGANVDGYSPIY+ NDWSPSGDVY GG+TGLAIWAVT
Sbjct: 61 KPRGKGVYQFVDKYGANVDGYSPIYDTNDWSPSGDVYVGGSTGLAIWAVT 110
>gi|357451409|ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485029|gb|AES66232.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|388509646|gb|AFK42889.1| unknown [Medicago truncatula]
Length = 136
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 108/138 (78%), Gaps = 15/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+G VYQFVDKYGANVDGYSPIY DWSP+GDVYTGG TGLAIWAVTLA
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLA 118
Query: 108 GLLAGGALLVYNTSALAQ 125
GLLAGGALLVYNTSAL+Q
Sbjct: 119 GLLAGGALLVYNTSALSQ 136
>gi|146454592|gb|ABQ41962.1| photosystem II 10 kDa polypeptide [Sonneratia caseolaris]
Length = 121
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 89/110 (80%), Gaps = 14/110 (12%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREG------ 61
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 62 ------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
VYQFVDKYGANVDGYSPIY+ NDWSP GDVY GG+TGLAIWAVT
Sbjct: 61 KPKGKGVYQFVDKYGANVDGYSPIYDTNDWSPGGDVYVGGSTGLAIWAVT 110
>gi|112292665|gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
terminalis]
Length = 138
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 108/140 (77%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MA SVM SSLSLK +PF +EKSAARGLPSLA+ +SF++ A G KIKTDKPYG GGM
Sbjct: 1 MATSVM-SSLSLKASPF-LEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMS 58
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
LR+G VYQFVDKYGANVDGYSPIY++ DWSPSG VY GG TGL +WA+T
Sbjct: 59 LRDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAIT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LA LL GGALLVYNTSAL+Q
Sbjct: 119 LAALLLGGALLVYNTSALSQ 138
>gi|99014566|emb|CAK22270.1| Photosystem II 10 kDa polypeptide, chloroplast precursor
[Chenopodium rubrum]
Length = 121
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/129 (74%), Positives = 106/129 (82%), Gaps = 12/129 (9%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGM 56
MAASV+ SSLSLKP+ F V+ K+A +GLPSL++ TSF + A GGK IKTDKP G
Sbjct: 1 MAASVVMSSLSLKPSSFNVDTKAAVKGLPSLSRSSTSFTVRASGGKKIKTDKPSG----- 55
Query: 57 DLREGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALL 116
+GVYQFVDKYGANVDGYSPIYNE +WSPSGDVYTGG TGL IWAVTLAGLLAGGALL
Sbjct: 56 ---KGVYQFVDKYGANVDGYSPIYNEEEWSPSGDVYTGGTTGLLIWAVTLAGLLAGGALL 112
Query: 117 VYNTSALAQ 125
VYNTSALAQ
Sbjct: 113 VYNTSALAQ 121
>gi|242042938|ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
gi|241922717|gb|EER95861.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
Length = 137
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 98/137 (71%), Gaps = 14/137 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PF PS ++F+++AK KIKT +P+G GG++L+
Sbjct: 1 MAASVMAS-LSLKPSPFLDRSRFTSVQPSARSSTFRVMAKKTKKIKTSQPFGPAGGLNLK 59
Query: 60 EGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+GV YQF +KYGANVDGYSPIYN +WSPSGDVY GG TGL +WAVTLA
Sbjct: 60 DGVDASGRPAKGKGVYQFANKYGANVDGYSPIYNPEEWSPSGDVYVGGKTGLLLWAVTLA 119
Query: 108 GLLAGGALLVYNTSALA 124
G+L GGALL+YNTSALA
Sbjct: 120 GILLGGALLIYNTSALA 136
>gi|226502122|ref|NP_001148037.1| photosystem II3 [Zea mays]
gi|195610816|gb|ACG27238.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195615454|gb|ACG29557.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617002|gb|ACG30331.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617342|gb|ACG30501.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195618136|gb|ACG30898.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195623906|gb|ACG33783.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|413921085|gb|AFW61017.1| photosystem II polypeptide [Zea mays]
Length = 128
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 99/136 (72%), Gaps = 21/136 (15%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ GG+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGGGLTV 51
Query: 59 R----------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAG 108
+GVYQFVDKYGANVDGYSPIYNE+DWSP+GDVY GG TGL IWAVTLAG
Sbjct: 52 DVDANGRKGKGKGVYQFVDKYGANVDGYSPIYNEDDWSPTGDVYVGGTTGLLIWAVTLAG 111
Query: 109 LLAGGALLVYNTSALA 124
+L GGALLVYNTSAL+
Sbjct: 112 ILGGGALLVYNTSALS 127
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|170127|gb|AAA34037.1| 10kd polypeptide precursor [Spinacia oleracea]
Length = 140
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 108/141 (76%), Gaps = 17/141 (12%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 104
LR+GV YQFVDKYGANVDGYSPIYNE +W+P+GDVY GG TGL IWAV
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAV 119
Query: 105 TLAGLLAGGALLVYNTSALAQ 125
TLAGLLAGGALLVYNTSALAQ
Sbjct: 120 TLAGLLAGGALLVYNTSALAQ 140
>gi|195619612|gb|ACG31636.1| photosystem II 10 kDa polypeptide [Zea mays]
Length = 128
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 97/136 (71%), Gaps = 21/136 (15%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ G+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGXGLTV 51
Query: 59 R----------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAG 108
+GVY FVDKYGANVDGYSPIYNE+DWSP+GDVY GG TGL IWAVTLAG
Sbjct: 52 DVDANGRKGKGKGVYHFVDKYGANVDGYSPIYNEDDWSPTGDVYVGGTTGLLIWAVTLAG 111
Query: 109 LLAGGALLVYNTSALA 124
+L GGALLVYNTSAL+
Sbjct: 112 ILGGGALLVYNTSALS 127
>gi|224115376|ref|XP_002317016.1| predicted protein [Populus trichocarpa]
gi|118483083|gb|ABK93451.1| unknown [Populus trichocarpa]
gi|222860081|gb|EEE97628.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 104/136 (76%), Gaps = 15/136 (11%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDLR-- 59
+SVMASS+SLKPAPFTV+K + ++SFK+ A + K KTD+PYG+NGGMDLR
Sbjct: 4 SSVMASSMSLKPAPFTVKKPSLPS--LSRRSSFKVEASRSRKSKTDQPYGINGGMDLRGG 61
Query: 60 ----------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGL 109
+GVYQFVDKYGANVDGYSPIY+ DWSPSG+VY GG TGL IWAVTLAGL
Sbjct: 62 LDASGRKGKGKGVYQFVDKYGANVDGYSPIYDPKDWSPSGEVYVGGTTGLLIWAVTLAGL 121
Query: 110 LAGGALLVYNTSALAQ 125
LAGGALLVYNTSAL Q
Sbjct: 122 LAGGALLVYNTSALVQ 137
>gi|213512148|ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloroplast [Salmo salar]
gi|209730436|gb|ACI66087.1| Photosystem II 10 kDa polypeptide, chloroplast precursor [Salmo
salar]
Length = 138
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 98/138 (71%), Gaps = 15/138 (10%)
Query: 1 MAASVMASSLSLKPAPFTV-EKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDL 58
M+ASVMAS L+LKP+P + E+S RG+ A+ S IVA K KI+T +PYG GG+D
Sbjct: 1 MSASVMAS-LALKPSPPPLWERSKIRGVRPSARPSLLIVASKVKKIQTAQPYGPGGGVDF 59
Query: 59 REG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
++G VYQF +KYGANVDGYSPIY +WSP GDVY GG TGL +WAVTL
Sbjct: 60 KDGLDASGRVAKGKGVYQFANKYGANVDGYSPIYTPEEWSPGGDVYVGGKTGLFLWAVTL 119
Query: 107 AGLLAGGALLVYNTSALA 124
AG+L GGALLVYNTSALA
Sbjct: 120 AGILLGGALLVYNTSALA 137
>gi|241865170|gb|ACS68663.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
gi|241865402|gb|ACS68733.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 114
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 81/100 (81%), Gaps = 14/100 (14%)
Query: 20 EKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREG------------VYQF 65
E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G VYQF
Sbjct: 2 ERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGRKPRGKGVYQF 61
Query: 66 VDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
VDKYGANVDGYSPIY+ NDWSPSGDVY GG+TGLAIWAVT
Sbjct: 62 VDKYGANVDGYSPIYDTNDWSPSGDVYVGGSTGLAIWAVT 101
>gi|25989650|gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
Length = 139
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 106/140 (75%), Gaps = 16/140 (11%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS+M SSL+LKPA E+S+ +GLPSL ++S FK+ A GGK IKT PYG GGM+
Sbjct: 1 MAASMM-SSLALKPATPVFERSSVKGLPSLVRSSSSFKVQASGGKKIKTATPYGPGGGMN 59
Query: 58 LR------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L +GVYQFVDKYGANVDGYSPIY+ ++WSPSGDVY GG TGL +WA+T
Sbjct: 60 LPAGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLIVWAIT 119
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAGLL GGALLVY+TSALAQ
Sbjct: 120 LAGLLGGGALLVYSTSALAQ 139
>gi|222636434|gb|EEE66566.1| hypothetical protein OsJ_23089 [Oryza sativa Japonica Group]
Length = 139
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 16/139 (11%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG +
Sbjct: 1 MAASVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPN 59
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L++GV YQF KYGANVDGYSPIYN +WSPSGDVYTGG TGL +WAVT
Sbjct: 60 LKDGVDASGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDVYTGGKTGLLLWAVT 119
Query: 106 LAGLLAGGALLVYNTSALA 124
L+G+L GALLVYNTSALA
Sbjct: 120 LSGILLAGALLVYNTSALA 138
>gi|269930242|gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 106/140 (75%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMD 57
MA+SV+ SSLSLKP+P + +S +GLPSLA+ + + K G KIKTD P+G+ GGM
Sbjct: 1 MASSVI-SSLSLKPSPISA-RSPVKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMK 58
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L++G VYQFVDKYGANVDGYSPIY+ ++WSPSGDVY GG TGL IWAVT
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAGLLAGGALLVYNTSALAQ
Sbjct: 119 LAGLLAGGALLVYNTSALAQ 138
>gi|218199087|gb|EEC81514.1| hypothetical protein OsI_24892 [Oryza sativa Indica Group]
Length = 139
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 99/139 (71%), Gaps = 16/139 (11%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA SVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG++
Sbjct: 1 MATSVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGLN 59
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L++GV YQF KYGANVDGYSPIYN +WSPSGD+YTGG TGL +WAVT
Sbjct: 60 LKDGVDASGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDLYTGGKTGLLLWAVT 119
Query: 106 LAGLLAGGALLVYNTSALA 124
L+G+L GALLVYNTSALA
Sbjct: 120 LSGILLAGALLVYNTSALA 138
>gi|357111682|ref|XP_003557641.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Brachypodium distachyon]
Length = 139
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 94/138 (68%), Gaps = 14/138 (10%)
Query: 1 MAASVMASS-LSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS+ L P+PF + PS SF++++K K ++T +P+G GG++L
Sbjct: 1 MAASVMASTALKPSPSPFIGQPRLRAIQPSARSPSFRVMSKKAKKVQTSQPFGPGGGLEL 60
Query: 59 REGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
++GV YQF KYGANVDGYSPIYN +WSPSGD Y GG TGL +WAVTL
Sbjct: 61 KDGVDASGRPAKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDFYAGGKTGLLLWAVTL 120
Query: 107 AGLLAGGALLVYNTSALA 124
AG+L GGALL+YNTS+LA
Sbjct: 121 AGILLGGALLIYNTSSLA 138
>gi|222636433|gb|EEE66565.1| hypothetical protein OsJ_23088 [Oryza sativa Japonica Group]
Length = 137
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 15/138 (10%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
+EGV YQF +KYGANVDGYSPIY +WS +GDVY GG GL +WA+TL
Sbjct: 60 KEGVDASGMVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITL 119
Query: 107 AGLLAGGALLVYNTSALA 124
AG+L GGA+LVYNTSALA
Sbjct: 120 AGILVGGAILVYNTSALA 137
>gi|115470575|ref|NP_001058886.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|22831113|dbj|BAC15975.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|50509251|dbj|BAD30534.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|113610422|dbj|BAF20800.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|215692793|dbj|BAG88237.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199086|gb|EEC81513.1| hypothetical protein OsI_24891 [Oryza sativa Indica Group]
Length = 137
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 15/138 (10%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
+EGV YQF +KYGANVDGYSPIY +WS +GDVY GG GL +WA+TL
Sbjct: 60 KEGVDASGRVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVGGKAGLLLWAITL 119
Query: 107 AGLLAGGALLVYNTSALA 124
AG+L GGA+LVYNTSALA
Sbjct: 120 AGILVGGAILVYNTSALA 137
>gi|3914470|sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1321868|emb|CAA66373.1| 10kD PSII protein [Hordeum vulgare]
gi|326521128|dbj|BAJ96767.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532058|dbj|BAK01405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 96/139 (69%), Gaps = 17/139 (12%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
+EGV YQF DKYGANVDGYSPIY +WSPSGDVY GG TGL +WAVT
Sbjct: 59 FKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVT 118
Query: 106 LAGLLAGGALLVYNTSALA 124
LAG+L GGALLVY+TSALA
Sbjct: 119 LAGILLGGALLVYSTSALA 137
>gi|34393640|dbj|BAC83336.1| putative Photosystem II 10 kDa polypeptide, chloroplast precursor
[Oryza sativa Japonica Group]
Length = 134
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 93/132 (70%), Gaps = 15/132 (11%)
Query: 8 SSLSLKPAPFT-VEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGV-- 62
+S +LKP+P +E++ R + PS + F+++AK K I+T +P+G GG +L++GV
Sbjct: 2 ASCALKPSPSPFLEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPNLKDGVDA 61
Query: 63 ----------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAG 112
YQF KYGANVDGYSPIYN +WSPSGDVYTGG TGL +WAVTL+G+L
Sbjct: 62 SGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDVYTGGKTGLLLWAVTLSGILLA 121
Query: 113 GALLVYNTSALA 124
GALLVYNTSALA
Sbjct: 122 GALLVYNTSALA 133
>gi|283101080|gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|339716046|gb|AEJ88270.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 103/140 (73%), Gaps = 17/140 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMD 57
M +SV+ SSLSLKP+P + +S +GLPSLA+ + + K G KIKTD P+G GGM
Sbjct: 1 MTSSVI-SSLSLKPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMK 58
Query: 58 LREG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 105
L++G VYQFVDKYGANVDGYSPIY+ ++WSPSGDVY GG TGL IWA T
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAAT 118
Query: 106 LAGLLAGGALLVYNTSALAQ 125
LAGLLAGGALLVYNTSALAQ
Sbjct: 119 LAGLLAGGALLVYNTSALAQ 138
>gi|242078467|ref|XP_002444002.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
gi|241940352|gb|EES13497.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
Length = 132
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 101/137 (73%), Gaps = 19/137 (13%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVA-KGGKIKTDKPYGVNGGMD 57
MAAS+++SS + P S A+GLPSL + +SF +V G KIKTDKP+G+ GG+
Sbjct: 1 MAASMISSSALVAPP------SRAQGLPSLGRRASSFAVVCGTGKKIKTDKPFGIGGGLT 54
Query: 58 LRE----------GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+ + GVYQFVDKYGANVDGYSPIYNEN+WSPSG+VY GG TGL IWA+TLA
Sbjct: 55 VDKDASGRKVKGKGVYQFVDKYGANVDGYSPIYNENEWSPSGNVYVGGTTGLLIWAITLA 114
Query: 108 GLLAGGALLVYNTSALA 124
GLL GGALLVYNTSAL+
Sbjct: 115 GLLGGGALLVYNTSALS 131
>gi|357111680|ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II 10 kDa polypeptide,
chloroplastic-like [Brachypodium distachyon]
Length = 138
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 88/138 (63%), Gaps = 15/138 (10%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDL 58
M+ SVMAS L+LKP+ P PS+ F + K K++T +PYG +G +
Sbjct: 1 MSDSVMAS-LALKPSSSPLLERSKLQARXPSVRPPLFIVAKKAKKVQTSQPYGPSGEVVF 59
Query: 59 REGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTL 106
+EGV YQF +KYGANVDGYSPIY +WSPSGDVY GG TGL +WAVTL
Sbjct: 60 KEGVDASGRVAKGKGVYQFSNKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTL 119
Query: 107 AGLLAGGALLVYNTSALA 124
G+L GGALLVY+TSALA
Sbjct: 120 TGILLGGALLVYSTSALA 137
>gi|115475227|ref|NP_001061210.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|38636958|dbj|BAD03219.1| putative photosystem II 10K protein [Oryza sativa Japonica Group]
gi|113623179|dbj|BAF23124.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|215740428|dbj|BAG97084.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768077|dbj|BAH00306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 130
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 96/132 (72%), Gaps = 16/132 (12%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLR--- 59
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM +
Sbjct: 1 MATSMITSP---LVAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVDIDA 57
Query: 60 -------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAG 112
+GVYQFVDKYGANVDGYSPIY+ +WSP+GD Y GG TGL IWAVTLAGLL G
Sbjct: 58 SGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGG 117
Query: 113 GALLVYNTSALA 124
GALLVYNTSALA
Sbjct: 118 GALLVYNTSALA 129
>gi|125560490|gb|EAZ05938.1| hypothetical protein OsI_28175 [Oryza sativa Indica Group]
Length = 130
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 96/132 (72%), Gaps = 16/132 (12%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLR--- 59
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM +
Sbjct: 1 MATSMITSPL---VAPARAKGLPSISRRGSSFAIVCTGGKKIKTDKPYGIGGGMSVDIDA 57
Query: 60 -------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAG 112
+GVYQFVDKYGANVDGYSPIY+ +WSP+GD Y GG TGL IWAVTLAGLL G
Sbjct: 58 SGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGG 117
Query: 113 GALLVYNTSALA 124
GALLVYNTSALA
Sbjct: 118 GALLVYNTSALA 129
>gi|83317160|gb|ABC02754.1| PS II 10 kDa protein [Phyllostachys edulis]
Length = 130
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 97/132 (73%), Gaps = 16/132 (12%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLR--- 59
MA+S+ P + + A+G+PSL++ +SF IV GGK IKTDKPYG+ GGM +
Sbjct: 1 MATSMITSP---LLAPTRAKGMPSLSRRGSSFAIVCGGGKKIKTDKPYGIGGGMTVDVDA 57
Query: 60 -------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAG 112
+GVYQFVDKYGANVDGYSPIY+ +WSPSGDVY GG TGL IWA+TLAGLL G
Sbjct: 58 NGRKGKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLAGLLGG 117
Query: 113 GALLVYNTSALA 124
GALLVYNTSALA
Sbjct: 118 GALLVYNTSALA 129
>gi|357451411|ref|XP_003595982.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485030|gb|AES66233.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 127
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 79/108 (73%), Gaps = 15/108 (13%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGG 95
+G VYQFVDKYGANVDGYSPIY DWSP+GDVYTGG
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGG 106
>gi|1835731|gb|AAB46718.1| photosystem II 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 126
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 90/119 (75%), Gaps = 13/119 (10%)
Query: 19 VEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLR----------EGVYQF 65
V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +GVYQF
Sbjct: 7 VAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVDIDASGRKSTGKGVYQF 66
Query: 66 VDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
VDKYGANVDGYSPIY+ +WSP+GD Y GG TGL IWAVTLAGLL GGALLVYNTSALA
Sbjct: 67 VDKYGANVDGYSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 125
>gi|148279894|gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]
Length = 106
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 79/108 (73%), Gaps = 15/108 (13%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS LSLKP PFT+EKS+ +GLPS+++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-LSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLP 58
Query: 60 ------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGG 95
+GVYQFVDKYGANVDGYSPIY DWS +GDVY GG
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDVYAGG 106
>gi|116778776|gb|ABK20990.1| unknown [Picea sitchensis]
gi|116780441|gb|ABK21682.1| unknown [Picea sitchensis]
gi|116782098|gb|ABK22369.1| unknown [Picea sitchensis]
gi|116784501|gb|ABK23366.1| unknown [Picea sitchensis]
gi|116789036|gb|ABK25094.1| unknown [Picea sitchensis]
gi|116790690|gb|ABK25703.1| unknown [Picea sitchensis]
gi|224285151|gb|ACN40303.1| unknown [Picea sitchensis]
Length = 150
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 92/149 (61%), Gaps = 25/149 (16%)
Query: 1 MAASVMASSLSLKPAPFTVEKSA------ARGLPS------LAKTSFKIVAKGGK-IKTD 47
MA +V + S + ++EKSA +GLPS + S K+VA GGK IK D
Sbjct: 1 MAMAVAGAGCSSVVSSLSLEKSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVD 60
Query: 48 KPYGVNGGMDLR------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGG 95
+P G +G + R +GVYQF KYGANVDGYSPIY+ DWSP+GDVY GG
Sbjct: 61 EPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVDGYSPIYDTKDWSPTGDVYVGG 120
Query: 96 ATGLAIWAVTLAGLLAGGALLVYNTSALA 124
TGL IWA+T A +L GGALLVYNTSAL+
Sbjct: 121 KTGLLIWAITFAAILGGGALLVYNTSALS 149
>gi|283101070|gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|351066200|gb|AEQ39074.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 93/128 (72%), Gaps = 16/128 (12%)
Query: 13 KPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMDLREG-------- 61
KP+P + +S +GLPSLA+ + + K G KIKTD P+G GGM L++G
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKLKDGLDASGRKG 70
Query: 62 ----VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLV 117
VYQFVDKYGANVDGYSPIY+ ++WSPSGDVY GG TGL IWA TLAGLLAGGALLV
Sbjct: 71 KGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAGGALLV 130
Query: 118 YNTSALAQ 125
YNTSALAQ
Sbjct: 131 YNTSALAQ 138
>gi|119720770|gb|ABL97955.1| chloroplast photosystem II 10 kDa polypeptide precursor [Brassica
rapa]
Length = 82
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 66/82 (80%), Gaps = 12/82 (14%)
Query: 56 MDLREGV------------YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWA 103
MDLR+GV Y+FVDKYGANVDGYSPIYNE +WSP GDVY GG TGLAIWA
Sbjct: 1 MDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSPGGDVYKGGVTGLAIWA 60
Query: 104 VTLAGLLAGGALLVYNTSALAQ 125
VTLAG+LAGGALLVYNTSALAQ
Sbjct: 61 VTLAGILAGGALLVYNTSALAQ 82
>gi|302780972|ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
gi|300159727|gb|EFJ26346.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
Length = 135
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 78/116 (67%), Gaps = 14/116 (12%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR------------EGVYQFVDKY 69
AARGLP+L+ T + A+GGK I T P G +G + + +GVYQF KY
Sbjct: 21 AARGLPALS-TRLTVTARGGKKISTKAPLGPSGDLSFKSGLDASGRGTKGKGVYQFTKKY 79
Query: 70 GANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALAQ 125
GANVDGYSPIY ++WSPSGDVYTGG TGL +WA+TL G+L G LVY+TSALA
Sbjct: 80 GANVDGYSPIYTPDEWSPSGDVYTGGQTGLLLWAITLGGVLLAGVFLVYSTSALAS 135
>gi|104763664|gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
Length = 144
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 97/138 (70%), Gaps = 15/138 (10%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGG---KIKTDKPYGVNGGMDLR 59
A+VM+S +PF + A+ LPSLA++S + + KI+T PYG+NGG+ L+
Sbjct: 7 ATVMSSFFVRPSSPFLERSAQAKALPSLARSSSSLRVEASAKKKIQTATPYGINGGLSLK 66
Query: 60 EG------------VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+G VYQFVDKYGANVDGYSPIY+ +WSPSGDVY GG TGL IWA+TLA
Sbjct: 67 DGADASGRKAKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLA 126
Query: 108 GLLAGGALLVYNTSALAQ 125
GLLAGGALLVYNTSALAQ
Sbjct: 127 GLLAGGALLVYNTSALAQ 144
>gi|149391015|gb|ABR25525.1| photosystem ii 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 128
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/109 (66%), Positives = 81/109 (74%), Gaps = 11/109 (10%)
Query: 27 LPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR----------EGVYQFVDKYGANVDG 75
+ S +SF IV GGK IKTDKPYG+ GGM + +GVYQFVDKYGANVDG
Sbjct: 19 VHSRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVDIDASGRKSTGKGVYQFVDKYGANVDG 78
Query: 76 YSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
YSPIY+ +WSP+GD Y GG TGL IWAVTLAGLL GGALLVYNTSALA
Sbjct: 79 YSPIYSPEEWSPTGDTYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 127
>gi|302804845|ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
gi|300148023|gb|EFJ14684.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
Length = 135
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 76/116 (65%), Gaps = 14/116 (12%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR------------EGVYQFVDKY 69
AARGLP+L+ + A GGK I T P G +G + + +GVYQF KY
Sbjct: 21 AARGLPALS-IRLTVTASGGKKISTKTPLGPSGDLTFKSGVDASGRGAKGKGVYQFTKKY 79
Query: 70 GANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALAQ 125
GANVDGYSPIY ++WSPSGDVY+GG TGL +WA+TL G+L G LVY+TSALA
Sbjct: 80 GANVDGYSPIYTPDEWSPSGDVYSGGQTGLLLWAITLGGVLLAGVFLVYSTSALAS 135
>gi|222640075|gb|EEE68207.1| hypothetical protein OsJ_26372 [Oryza sativa Japonica Group]
Length = 149
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 73/94 (77%), Gaps = 10/94 (10%)
Query: 41 GGKIKTDKPYGVNGGMDLR----------EGVYQFVDKYGANVDGYSPIYNENDWSPSGD 90
G KIKTDKPYG+ GGM + +GVYQFVDKYGANVDGYSPIY+ +WSP+GD
Sbjct: 55 GKKIKTDKPYGIGGGMSVDIDASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGD 114
Query: 91 VYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
Y GG TGL IWAVTLAGLL GGALLVYNTSALA
Sbjct: 115 TYVGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 148
>gi|326495290|dbj|BAJ85741.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510039|dbj|BAJ87236.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 127
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 83/115 (72%), Gaps = 13/115 (11%)
Query: 23 AARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDL----------REGVYQFVDKY 69
A LPSL++ +SF +V GGK IK DKP G+ GG+ + ++GVYQFVDKY
Sbjct: 12 APTSLPSLSRRGSSFAVVCSGGKKIKVDKPLGLGGGLTVDIDANGRKVGKKGVYQFVDKY 71
Query: 70 GANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
GANVDGYSPIY +WS SGD Y GG TGL IWAVTLAGLL GGALLVYNTSALA
Sbjct: 72 GANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTLAGLLGGGALLVYNTSALA 126
>gi|357145089|ref|XP_003573520.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357145092|ref|XP_003573521.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357145094|ref|XP_003573522.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 127
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 89/137 (64%), Gaps = 24/137 (17%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS++ S L A LPSL++ ++F +V GGK IK DKP G+ GG+
Sbjct: 1 MAASMITSPLV-----------APTSLPSLSRRGSNFAVVCSGGKKIKVDKPLGIGGGLT 49
Query: 58 LR----------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLA 107
+ +GVYQFVDKYGANVDGYSPIY WS SGD Y GG TGL IWAVTLA
Sbjct: 50 VDIDANGRKGTGKGVYQFVDKYGANVDGYSPIYTPEVWSESGDRYAGGTTGLLIWAVTLA 109
Query: 108 GLLAGGALLVYNTSALA 124
GLL GGALLVYNTSALA
Sbjct: 110 GLLGGGALLVYNTSALA 126
>gi|155733519|gb|ABU39902.1| photosystem II 10 kDa polypeptide [Olea europaea]
Length = 74
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 60 EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYN 119
+GVYQ+VDKYGANVDGYSPI+N +DWSPSGDVY GG TGLAIWAVTL G+LAGGALLVY+
Sbjct: 15 KGVYQYVDKYGANVDGYSPIFNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYS 74
>gi|37783281|gb|AAP72269.1| photosystem II polypeptide [Triticum aestivum]
Length = 99
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 69/94 (73%), Gaps = 10/94 (10%)
Query: 41 GGKIKTDKPYGVNGGMDL----------REGVYQFVDKYGANVDGYSPIYNENDWSPSGD 90
G KIK DKP G+ GG+ + ++GVYQFVDKYGANVDGYSPIY +WS SGD
Sbjct: 5 GKKIKVDKPLGLGGGLTVDIDANGRKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESGD 64
Query: 91 VYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
Y GG TGL IWAVTLAGLL GG LLVYNTSALA
Sbjct: 65 RYAGGTTGLLIWAVTLAGLLGGGVLLVYNTSALA 98
>gi|183013704|gb|ACC38381.1| photosystem II PsbR protein [Lilium formosanum]
Length = 78
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 48/58 (82%)
Query: 60 EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLV 117
+GVYQFVDKYGANVDGYSPIY +WS GDVY GG TGL IWAVTL G+L GGALLV
Sbjct: 21 KGVYQFVDKYGANVDGYSPIYTPEEWSEGGDVYVGGTTGLLIWAVTLVGILGGGALLV 78
>gi|357451413|ref|XP_003595983.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485031|gb|AES66234.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 88
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 63/89 (70%), Gaps = 15/89 (16%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSRP-FKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 E------------GVYQFVDKYGANVDGY 76
+ GVYQFVDKYGANVDGY
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGY 87
>gi|227204419|dbj|BAH57061.1| AT1G79040 [Arabidopsis thaliana]
Length = 77
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 56/65 (86%), Gaps = 3/65 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGV 62
LR+GV
Sbjct: 61 LRDGV 65
>gi|8698891|gb|AAF78511.1|AF195209_1 polypeptide precursor of photosystem II [Pyrus pyrifolia]
Length = 82
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 15/82 (18%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKT--SFKIVAKGG-KIKTDKPYGVNGGMD 57
MAASVM SS+SLKP+PFTV+K A RGLPSL+++ SFK+ A GG KI+T PYG+NGGMD
Sbjct: 1 MAASVMTSSVSLKPSPFTVDKPAVRGLPSLSRSSASFKVQASGGKKIRTATPYGINGGMD 60
Query: 58 LRE------------GVYQFVD 67
LR+ GVYQFVD
Sbjct: 61 LRDGVDASGRKGKGKGVYQFVD 82
>gi|168019742|ref|XP_001762403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686481|gb|EDQ72870.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 74/119 (62%), Gaps = 16/119 (13%)
Query: 22 SAARGLPSL----AKTSFKIVAKGGKIKTDKPYGVNGGMDLREGV------------YQF 65
+A +GLP+L A + A KIK +P G +G ++GV YQF
Sbjct: 28 AAVQGLPALKMNLAARPLTVTASTKKIKVAQPLGPSGDFKSKKGVDAGGRVLKGKGVYQF 87
Query: 66 VDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
VDKYGANVDGYSPIY + +WS SGD Y GG LAIWA+ L GLL GGALLVYNTSAL+
Sbjct: 88 VDKYGANVDGYSPIYAKEEWSKSGDSYAGGTPALAIWALLLGGLLVGGALLVYNTSALS 146
>gi|168019568|ref|XP_001762316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686394|gb|EDQ72783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 71/109 (65%), Gaps = 13/109 (11%)
Query: 29 SLAKTSFKIV--AKGGKIKTDKPYGVNGGMDLR-----------EGVYQFVDKYGANVDG 75
SL++TS ++ A KIK +P G +G + + +GVYQFVDKYGANVDG
Sbjct: 37 SLSRTSRSLIVTASTKKIKVSQPLGPSGDLKKKGVDAGGRVLKGKGVYQFVDKYGANVDG 96
Query: 76 YSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
YSPIY ++WS GD Y GG LAIWA+ L GLL GALLVYNTSAL+
Sbjct: 97 YSPIYARDEWSQGGDSYAGGTPALAIWALLLGGLLLTGALLVYNTSALS 145
>gi|168004549|ref|XP_001754974.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694078|gb|EDQ80428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 80/131 (61%), Gaps = 21/131 (16%)
Query: 15 APFTVEKS-----AARGLPSL----AKTSFKIVAKGGKIKTDKPYGVNG------GMD-- 57
AP +E+S A +G+P+L + + A K+K +P G +G G+D
Sbjct: 16 APSAMERSSFSGAAVQGVPALRVSRSARPLSVTASTKKLKVAQPLGPSGDFKNKKGVDAG 75
Query: 58 ---LR-EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGG 113
L+ +GVYQFVDKYGANVDGYSPIY +WS GD Y GG LAIWA+ L GLL G
Sbjct: 76 GRVLKGKGVYQFVDKYGANVDGYSPIYAREEWSAGGDSYAGGTPALAIWALLLGGLLVTG 135
Query: 114 ALLVYNTSALA 124
ALLVYNTSAL+
Sbjct: 136 ALLVYNTSALS 146
>gi|224284194|gb|ACN39833.1| unknown [Picea sitchensis]
Length = 133
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 25/131 (19%)
Query: 1 MAASVMASSLSLKPAPFTVEKSA------ARGLPS------LAKTSFKIVAKGGK-IKTD 47
MA +V + S + ++EKSA +GLPS + S K+VA GGK IK D
Sbjct: 1 MAMAVAGAGCSSVVSSLSLEKSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVD 60
Query: 48 KPYGVNGGMDLR------------EGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGG 95
+P G +G + R +GVYQF KYGANVDGYSPIY+ DWSP+GDVY GG
Sbjct: 61 EPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVDGYSPIYDTKDWSPTGDVYVGG 120
Query: 96 ATGLAIWAVTL 106
+ + + L
Sbjct: 121 TVNMILLVLIL 131
>gi|168015305|ref|XP_001760191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688571|gb|EDQ74947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 137
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 72/117 (61%), Gaps = 18/117 (15%)
Query: 26 GLPSLAKTS------FKIVAKGGKIKTDKPYGVNGGMDLREGV------------YQFVD 67
GLP+L+ T+ + A KIK +P G +G ++GV YQFVD
Sbjct: 20 GLPTLSTTTPRTARPLTVTANVKKIKVKEPLGPSGDFKNKKGVDAGGRVLKGKGVYQFVD 79
Query: 68 KYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALA 124
KYGANVDGYSPIY +++WS GD Y GG LAIWA+ L GLL GALLVYNTSAL+
Sbjct: 80 KYGANVDGYSPIYAKDEWSKGGDSYAGGTPALAIWALLLGGLLLTGALLVYNTSALS 136
>gi|384254288|gb|EIE27762.1| photosystem II protein PsbR, partial [Coccomyxa subellipsoidea
C-169]
Length = 109
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNT 120
GVY+F KYGANVDGYSPIY + W+ +GD Y+ G GL WA + LLA GA L+Y+T
Sbjct: 45 GVYRFASKYGANVDGYSPIYTPDVWAETGDSYSLGTKGLLAWAGLVTVLLAVGATLIYST 104
Query: 121 SALAQ 125
S L Q
Sbjct: 105 SQLGQ 109
>gi|307107577|gb|EFN55819.1| hypothetical protein CHLNCDRAFT_35273 [Chlorella variabilis]
Length = 144
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 43/65 (66%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNT 120
GVY+F +KYGANVDGYSPIY + WS SGD Y G GL WA + LL G LV +T
Sbjct: 80 GVYRFANKYGANVDGYSPIYTPDTWSESGDSYKLGTKGLLAWAGLIVVLLGVGVNLVVST 139
Query: 121 SALAQ 125
SA+ Q
Sbjct: 140 SAIGQ 144
>gi|338746114|emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium chlorophorum]
Length = 193
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 23/141 (16%)
Query: 7 ASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKT-----------DKPYGVNGG 55
A+S+ +P + R +P+ + KGGK+ T + GV+
Sbjct: 53 ATSMIAEPMQLARQAMPTRAMPNTRQLVIVEGGKGGKVNTGLSSVEDVVVKNNLEGVSRF 112
Query: 56 MDLRE------------GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWA 103
M+ + GVY+F KYG N+DGYSPIY +DWS +GD ++ G GL WA
Sbjct: 113 MNKKGWVDSQGRKGKGFGVYRFASKYGTNIDGYSPIYRPDDWSETGDTFSLGTKGLIAWA 172
Query: 104 VTLAGLLAGGALLVYNTSALA 124
+ LL G L+ TS L+
Sbjct: 173 GLIVVLLGVGGTLIVQTSQLS 193
>gi|32307614|gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans]
Length = 197
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 40/63 (63%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNT 120
GVY+F KYGANVDGYSPIY + WS SG+ Y G L W V + LL GA L+ +T
Sbjct: 135 GVYRFQKKYGANVDGYSPIYTPDIWSESGNSYKLGTNALIAWLVLVVTLLGIGANLIIST 194
Query: 121 SAL 123
S L
Sbjct: 195 SQL 197
>gi|193875820|gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata]
Length = 165
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNT 120
GVY+F KYGANVDGYSPIY + W+ SG+ Y G L WA + LLA GA L+ +T
Sbjct: 103 GVYRFEKKYGANVDGYSPIYTPDIWAESGNSYKLGTNALIAWAGLVVVLLAIGANLIIST 162
Query: 121 SAL 123
S L
Sbjct: 163 SQL 165
>gi|159476978|ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
gi|158282813|gb|EDP08565.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
Length = 121
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNT 120
GVY++ DKYGANVDGYSPIY + W+ SGD YT G GL WA + LLA G L+ +T
Sbjct: 57 GVYRYEDKYGANVDGYSPIYTPDLWTESGDSYTLGTKGLIAWAGLVLVLLAVGVNLIIST 116
Query: 121 SAL 123
S L
Sbjct: 117 SQL 119
>gi|302828496|ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
gi|300268630|gb|EFJ52810.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
Length = 141
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNT 120
GVY++ DKYGANVDGYSPIY + W+ SGD Y G GL WA + LLA G L+ +T
Sbjct: 77 GVYRYADKYGANVDGYSPIYTPDLWTESGDSYKLGTKGLIAWAGLVLVLLAVGVNLIIST 136
Query: 121 SAL 123
S L
Sbjct: 137 SQL 139
>gi|87313201|gb|ABD37897.1| photosystem II PsbR protein [Mesostigma viride]
Length = 137
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGM---- 56
++ASVM SS A + K A S+ K S VA GG K +K G M
Sbjct: 6 VSASVMTSSF----AGVKLAKVNAAPRQSVVKASPMTVASGGPKKLNKLKGPAELMGYKL 61
Query: 57 -----------DLREG-VYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 104
D + G VY+ G NVD YSPIY W+ +GD Y GG GLAIWAV
Sbjct: 62 STQAGSAPPTKDGKPGKVYKL---SGQNVDEYSPIYTPEQWASNGDTYAGGVLGLAIWAV 118
Query: 105 TLAGLLAGGALLVYNTSAL 123
G+L A + +TS+L
Sbjct: 119 LFLGVLGFSAFAILSTSSL 137
>gi|6440817|dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 128
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 30/43 (69%)
Query: 61 GVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWA 103
GVY+F DKYGANVDGYSPIY + W+ SG Y G GL WA
Sbjct: 64 GVYRFEDKYGANVDGYSPIYTADQWTESGASYKLGTKGLIAWA 106
>gi|412988828|emb|CCO15419.1| predicted protein [Bathycoccus prasinos]
Length = 177
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 71 ANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSAL 123
ANVD YSPIY+ ++ GD Y G L WA TLAG++ GAL +Y TSAL
Sbjct: 128 ANVDEYSPIYSPEEFKTDGDKYEGN---LLYWAATLAGIIGSGALAIYLTSAL 177
>gi|145346793|ref|XP_001417867.1| psbR, PSII-R, photosystem II polypeptide [Ostreococcus lucimarinus
CCE9901]
gi|144578095|gb|ABO96160.1| psbR, PSII-R, photosystem II polypeptide [Ostreococcus lucimarinus
CCE9901]
Length = 101
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 59 REGVYQFVDKYG-----ANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGG 113
R G +V K G ANVD YSPI+ D+ GD Y G L WA TLAG++ G
Sbjct: 35 RSGKAGYVYKLGLRNGKANVDEYSPIWVPQDFKSDGDKYEGN---LVYWAATLAGIIGTG 91
Query: 114 ALLVYNTSAL 123
AL +Y TSAL
Sbjct: 92 ALAIYLTSAL 101
>gi|324331732|gb|ADY38661.1| putative chloroplast photosystem II protein PsbR [Wolffia
arrhiza]
Length = 79
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Query: 13 KPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMDLREGV 62
KP+P + +S +GLPSLA+ + + K G KIKTD P+G GG +L++G+
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGTELKDGL 63
>gi|255083855|ref|XP_002508502.1| photosystem II PsbR protein, chloroplast precursor [Micromonas sp.
RCC299]
gi|226523779|gb|ACO69760.1| photosystem II PsbR protein, chloroplast precursor [Micromonas sp.
RCC299]
Length = 132
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 59 REGVYQFVDKYG-----ANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGG 113
R G +V K G ANVD YSPIY +++ GD Y G L + A + G++ G
Sbjct: 66 RSGKAGYVYKLGLRNGKANVDEYSPIYTPSEFKTDGDKYEG---DLKLAAGAVLGVIGTG 122
Query: 114 ALLVYNTSAL 123
AL + TSAL
Sbjct: 123 ALAILATSAL 132
>gi|326500542|dbj|BAK06360.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 83
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 29 SLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGVYQFVDKYGANVDGYS 77
+ ++V GG + + +G + +GVYQF DKYGANVDGY
Sbjct: 35 NFCVCERQLVGPGGGVAFKEGVDASGRVAKGKGVYQFADKYGANVDGYR 83
>gi|254784609|ref|YP_003072037.1| N-acetylglutamate synthase [Teredinibacter turnerae T7901]
gi|237684367|gb|ACR11631.1| amino-acid N-acetyltransferase [Teredinibacter turnerae T7901]
Length = 441
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 15 APFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGVYQFVDKY-GANV 73
A FT+E + + GLP KI + G T P GV G+D +Q K +
Sbjct: 103 ARFTIEAAFSSGLPDSPMYGSKIRVRCGNFVTAMPQGVIDGID-----HQLTGKVRSVDA 157
Query: 74 DGYSPIYNENDW---SPSGDVYTGGATGLAIW--AVTLAGLLAGGALLVYN 119
G + ++N SP G TG A L+ A+ +A L L+ YN
Sbjct: 158 SGIRAMLDQNSLALVSPLGYSLTGEAFNLSFADVAIAIANALRADKLIAYN 208
>gi|448348894|ref|ZP_21537742.1| UDP-glucuronate 5'-epimerase [Natrialba taiwanensis DSM 12281]
gi|445642555|gb|ELY95623.1| UDP-glucuronate 5'-epimerase [Natrialba taiwanensis DSM 12281]
Length = 327
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 56 MDLREGVYQFVDKYGANVDGYSPI 79
+D+REGV QFVD Y AN D Y P+
Sbjct: 300 VDIREGVSQFVDWYRANRDWYEPL 323
>gi|448361588|ref|ZP_21550203.1| UDP-glucuronate 5'-epimerase [Natrialba asiatica DSM 12278]
gi|445650082|gb|ELZ03011.1| UDP-glucuronate 5'-epimerase [Natrialba asiatica DSM 12278]
Length = 327
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 56 MDLREGVYQFVDKYGANVDGYSPI 79
+D+REGV QFVD Y AN D Y P+
Sbjct: 300 VDIREGVSQFVDWYRANRDWYEPL 323
>gi|83648575|ref|YP_437010.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|123726271|sp|Q2S9T9.1|SYI_HAHCH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
synthetase; Short=IleRS
gi|83636618|gb|ABC32585.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 941
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 32 KTSFKIVAKGGKIKTD-------KP--YGVNGGMDLREGVYQFVDKYGANVDGYSPIYNE 82
KT I+ GKI T KP + V GG L E ++ DK ++D P NE
Sbjct: 160 KTEADIIRALGKIATSGHLQKGYKPVYWSVVGGSALAEAEVEYKDKTSNSIDVSYPAENE 219
Query: 83 ND-WSPSGDVYTGGATGLAIWAVT 105
D S D GA + IW T
Sbjct: 220 QDLLSAFADASGEGAVSIVIWTTT 243
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,117,403,302
Number of Sequences: 23463169
Number of extensions: 95082678
Number of successful extensions: 199274
Number of sequences better than 100.0: 114
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 199042
Number of HSP's gapped (non-prelim): 115
length of query: 125
length of database: 8,064,228,071
effective HSP length: 91
effective length of query: 34
effective length of database: 5,929,079,692
effective search space: 201588709528
effective search space used: 201588709528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)