Query 033200
Match_columns 125
No_of_seqs 45 out of 47
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 18:14:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033200.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033200hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 76.9 0.67 4.9E-05 29.0 2.3 33 90-122 48-80 (80)
2 d1aisb2 a.74.1.2 (B:1206-1300) 70.3 1.5 0.00011 27.0 2.6 27 90-116 4-30 (95)
3 d1vola2 a.74.1.2 (A:208-316) T 68.2 1.6 0.00012 27.6 2.5 27 90-116 5-31 (109)
4 d1lvaa3 a.4.5.35 (A:511-574) C 63.6 4 0.00029 24.2 3.6 28 92-119 25-52 (64)
5 d1j5pa4 c.2.1.3 (A:-1-108,A:22 59.5 2.2 0.00016 27.3 2.0 23 102-124 86-108 (132)
6 d1vola1 a.74.1.2 (A:113-207) T 50.9 8.7 0.00063 23.1 3.7 24 91-114 7-30 (95)
7 d1aisb1 a.74.1.2 (B:1108-1205) 49.1 9.7 0.00071 23.0 3.7 25 91-115 7-31 (98)
8 d1nrza_ c.38.1.1 (A:) Sorbose 47.9 3.8 0.00028 28.4 1.8 37 88-124 13-60 (163)
9 d1tlta1 c.2.1.3 (A:5-127,A:268 44.7 12 0.00089 23.7 3.8 35 87-121 72-115 (164)
10 d1f1ea_ a.22.1.2 (A:) Archaeal 43.6 8.5 0.00062 26.0 3.0 51 61-120 3-53 (151)
11 d1v92a_ a.5.2.3 (A:) NSFL1 (p9 42.8 11 0.00077 21.4 2.9 23 88-110 4-26 (46)
12 d2ou3a1 a.287.1.1 (A:1-160) Te 38.6 6.4 0.00046 25.6 1.6 25 90-114 115-139 (160)
13 d2jn6a1 a.4.1.19 (A:1-89) Unch 35.1 14 0.001 22.1 2.8 39 81-119 10-52 (89)
14 d1lfpa_ e.39.1.1 (A:) Hypothet 34.8 31 0.0022 24.5 5.1 40 79-118 14-56 (243)
15 d1blea_ c.38.1.1 (A:) Fructose 32.1 4.6 0.00034 27.9 0.0 37 88-124 13-60 (161)
16 d1xl7a2 c.43.1.3 (A:393-610) P 30.3 23 0.0017 25.2 3.7 44 76-121 86-129 (218)
17 d1zh8a1 c.2.1.3 (A:4-131,A:276 28.9 31 0.0022 22.2 3.9 35 87-121 78-121 (181)
18 d2p0ta1 a.290.1.1 (A:22-169) U 27.1 36 0.0026 23.0 4.1 54 63-116 61-123 (148)
19 d1nm8a2 c.43.1.3 (A:386-599) C 26.3 29 0.0021 24.5 3.6 41 80-121 88-128 (214)
20 d1vkfa_ c.1.29.1 (A:) Glycerol 25.4 17 0.0012 25.9 2.2 26 93-118 63-90 (172)
21 d1qwga_ c.1.27.1 (A:) (2r)-pho 24.0 16 0.0012 27.0 1.9 26 95-120 92-129 (251)
22 d1j09a1 a.97.1.1 (A:306-468) C 23.8 41 0.003 20.9 3.6 26 90-115 108-133 (163)
23 d1wpga2 c.108.1.7 (A:344-360,A 22.7 40 0.0029 22.3 3.6 25 100-124 95-119 (168)
24 d1fs1b2 d.42.1.1 (B:2-68) Cycl 22.1 19 0.0014 20.9 1.5 20 84-103 17-36 (61)
25 d2i0za2 e.74.1.1 (A:193-361) F 20.7 42 0.0031 21.8 3.3 29 88-116 115-152 (169)
No 1
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=76.92 E-value=0.67 Score=28.96 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCChhhhhhHHHHHHHcCcccc
Q 033200 90 SQVITEFCKSIGADAKQRQGLIRLAKKNGERLG 122 (125)
Q Consensus 90 SQvIt~FC~~iG~d~k~RQ~LIRlAk~NG~kLG 122 (125)
.+.+.++|+.+|++..+-|.+..=.+.++++.|
T Consensus 48 ~~~~~~la~~~gl~~~~i~vWFqN~R~~~k~~g 80 (80)
T d1wh7a_ 48 DVAVEQFCAETGVRRQVLKIWMHNNKNSGPSSG 80 (80)
T ss_dssp THHHHHHHHHSCCCHHHHHHHHHTTSCCSCCCC
T ss_pred HHHHHHHHHHHCCCHHHeeeecccCcCCCCCCC
Confidence 367899999999999999999988888887765
No 2
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=70.26 E-value=1.5 Score=27.00 Aligned_cols=27 Identities=19% Similarity=0.450 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhCCChhhhhhHHHHHHH
Q 033200 90 SQVITEFCKSIGADAKQRQGLIRLAKK 116 (125)
Q Consensus 90 SQvIt~FC~~iG~d~k~RQ~LIRlAk~ 116 (125)
++.|..||+.++++.+.++.-.+++++
T Consensus 4 ~d~I~R~~~~L~L~~~i~~~A~~i~~~ 30 (95)
T d1aisb2 4 TDYVNKFADELGLSEKVRRRAIEILDE 30 (95)
T ss_dssp GGGHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 578999999999998777665555443
No 3
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.19 E-value=1.6 Score=27.62 Aligned_cols=27 Identities=15% Similarity=0.429 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCChhhhhhHHHHHHH
Q 033200 90 SQVITEFCKSIGADAKQRQGLIRLAKK 116 (125)
Q Consensus 90 SQvIt~FC~~iG~d~k~RQ~LIRlAk~ 116 (125)
++.|..||..+|++.+.++.-.+++++
T Consensus 5 ~d~i~Rf~s~L~L~~~i~~~A~~i~~~ 31 (109)
T d1vola2 5 GDFMSRFCSNLCLPKQVQMAATHIARK 31 (109)
T ss_dssp GGTHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 578999999999998888776666554
No 4
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=63.58 E-value=4 Score=24.19 Aligned_cols=28 Identities=18% Similarity=0.286 Sum_probs=25.6
Q ss_pred HHHHHHHHhCCChhhhhhHHHHHHHcCc
Q 033200 92 VITEFCKSIGADAKQRQGLIRLAKKNGE 119 (125)
Q Consensus 92 vIt~FC~~iG~d~k~RQ~LIRlAk~NG~ 119 (125)
.++++|+.+|++.+.-+.+.+++-..|.
T Consensus 25 ~vrdl~~~l~~~e~~~~~lL~~l~~~G~ 52 (64)
T d1lvaa3 25 SFKEVAGSFNLDPSELEELLHYLVREGV 52 (64)
T ss_dssp BHHHHHHHTTCCHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHCCC
Confidence 4899999999999999999999988875
No 5
>d1j5pa4 c.2.1.3 (A:-1-108,A:220-241) Hypothetical protein TM1643 {Thermotoga maritima [TaxId: 2336]}
Probab=59.54 E-value=2.2 Score=27.26 Aligned_cols=23 Identities=26% Similarity=0.238 Sum_probs=19.5
Q ss_pred CChhhhhhHHHHHHHcCcccccc
Q 033200 102 ADAKQRQGLIRLAKKNGERLGFL 124 (125)
Q Consensus 102 ~d~k~RQ~LIRlAk~NG~kLGfL 124 (125)
+|..+++.|.++||+||.++-|-
T Consensus 86 ad~~~~~~l~~~A~~~g~~i~~~ 108 (132)
T d1j5pa4 86 ADEVFRERFFSELKNSPARVFFP 108 (132)
T ss_dssp GSHHHHHHHHHHHHTCSCEEECC
T ss_pred cchhHHHHHHHHHHHcCCEEEEe
Confidence 36678899999999999998663
No 6
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.88 E-value=8.7 Score=23.15 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCChhhhhhHHHHH
Q 033200 91 QVITEFCKSIGADAKQRQGLIRLA 114 (125)
Q Consensus 91 QvIt~FC~~iG~d~k~RQ~LIRlA 114 (125)
+.|..||+.+|++......-.++.
T Consensus 7 ~~I~~~~~~L~L~~~i~~~A~~i~ 30 (95)
T d1vola1 7 KEITTMADRINLPRNKVDRTNNLF 30 (95)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHH
Confidence 789999999999977665444333
No 7
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=49.12 E-value=9.7 Score=23.05 Aligned_cols=25 Identities=8% Similarity=0.117 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCChhhhhhHHHHHH
Q 033200 91 QVITEFCKSIGADAKQRQGLIRLAK 115 (125)
Q Consensus 91 QvIt~FC~~iG~d~k~RQ~LIRlAk 115 (125)
+-|.+||+.++++...++.-..+.|
T Consensus 7 ~~I~~~~~~L~L~~~i~~~A~~i~k 31 (98)
T d1aisb1 7 SELDRITAQLKLPRHVEEEAARLYR 31 (98)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHH
Confidence 5699999999999887765444443
No 8
>d1nrza_ c.38.1.1 (A:) Sorbose permease subunit IIb , EIIb-sor {Klebsiella pneumoniae [TaxId: 573]}
Probab=47.85 E-value=3.8 Score=28.36 Aligned_cols=37 Identities=30% Similarity=0.455 Sum_probs=31.1
Q ss_pred HhHHHHHHHHHHhCCC-----------hhhhhhHHHHHHHcCcccccc
Q 033200 88 LHSQVITEFCKSIGAD-----------AKQRQGLIRLAKKNGERLGFL 124 (125)
Q Consensus 88 LHSQvIt~FC~~iG~d-----------~k~RQ~LIRlAk~NG~kLGfL 124 (125)
+|-||++.+++.++++ ...+|.+++.|.=-|-++.++
T Consensus 13 IHGQV~~~W~~~~~~~~IiVvdD~~A~D~~~k~~l~mA~P~gvk~~i~ 60 (163)
T d1nrza_ 13 IHGQVTTVWSKVANAQRIIICNDDVFNDEVRRTLLRQAAPPGMKVNVV 60 (163)
T ss_dssp SCHHHHHHHHHHHTCSEEEEECHHHHTCHHHHHHHHHTCCTTCEEEEE
T ss_pred hhhhhhhhhhcccCCCEEEEEcchhhCCHHHHHHHHhhCCCCCEEEEE
Confidence 6999999999999986 467899999998777776654
No 9
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=44.75 E-value=12 Score=23.75 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=30.7
Q ss_pred HHhHHHHHHHHHH---------hCCChhhhhhHHHHHHHcCccc
Q 033200 87 ALHSQVITEFCKS---------IGADAKQRQGLIRLAKKNGERL 121 (125)
Q Consensus 87 aLHSQvIt~FC~~---------iG~d~k~RQ~LIRlAk~NG~kL 121 (125)
.+|.+++....+. +..+..+=+.|+++|++||.++
T Consensus 72 ~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~ 115 (164)
T d1tlta1 72 ASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTL 115 (164)
T ss_dssp THHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred hhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCCcE
Confidence 5899999998876 7788899999999999999875
No 10
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=43.57 E-value=8.5 Score=25.95 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=38.7
Q ss_pred cchhhhhHHHhhhccchhhhhhhhHHHHhHHHHHHHHHHhCCChhhhhhHHHHHHHcCcc
Q 033200 61 IFAPVVVLTRNIIGKKRFNQFRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGER 120 (125)
Q Consensus 61 ~FaPlVv~~r~ilG~krfNklRGKaIaLHSQvIt~FC~~iG~d~k~RQ~LIRlAk~NG~k 120 (125)
+.||+--++|.++|..| +...|...=..++++|.+.|.-++ ..+|+.+|+|
T Consensus 3 P~a~I~rilk~~~~~~r---is~da~~~l~~~~~~~~~~Ia~eA------~~l~~~~~rK 53 (151)
T d1f1ea_ 3 PKAAIERIFRQGIGERR---LSQDAKDTIYDFVPTMAEYVANAA------KSVLDASGKK 53 (151)
T ss_dssp CHHHHHHHHHTTSTTCE---ECHHHHHHHHHHHHHHHHHHHHHH------HHHHHTTTCS
T ss_pred CccHHHHHHHHhCCccc---cCHHHHHHHHHHHHHHHHHHHHHH------HHHHHHcCCC
Confidence 57899999999998764 788888888888888888876543 3556666553
No 11
>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=42.79 E-value=11 Score=21.37 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=18.4
Q ss_pred HhHHHHHHHHHHhCCChhhhhhH
Q 033200 88 LHSQVITEFCKSIGADAKQRQGL 110 (125)
Q Consensus 88 LHSQvIt~FC~~iG~d~k~RQ~L 110 (125)
=|.+.|.+||.--|+++.+=+..
T Consensus 4 ~~~~lI~qF~~iTg~~~~~A~~~ 26 (46)
T d1v92a_ 4 ERQDALREFVAVTGAEEDRARFF 26 (46)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHCcCHHHHHHH
Confidence 47899999999999997654443
No 12
>d2ou3a1 a.287.1.1 (A:1-160) Tellurite resistance protein of COG3793 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}
Probab=38.61 E-value=6.4 Score=25.59 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhCCChhhhhhHHHHH
Q 033200 90 SQVITEFCKSIGADAKQRQGLIRLA 114 (125)
Q Consensus 90 SQvIt~FC~~iG~d~k~RQ~LIRlA 114 (125)
-++|.++|+.+|++....+.|+...
T Consensus 115 ~~~l~~ia~~Lgi~~~~~~~l~~~~ 139 (160)
T d2ou3a1 115 KAKIRKMATILGIKEEIVDQLEQLY 139 (160)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4689999999999999999888543
No 13
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=35.13 E-value=14 Score=22.13 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=29.8
Q ss_pred hhhhHHHHh--H--HHHHHHHHHhCCChhhhhhHHHHHHHcCc
Q 033200 81 FRGKAIALH--S--QVITEFCKSIGADAKQRQGLIRLAKKNGE 119 (125)
Q Consensus 81 lRGKaIaLH--S--QvIt~FC~~iG~d~k~RQ~LIRlAk~NG~ 119 (125)
++-.|+.+. + .-+.+.|+.+|+...+-.++|+.++.++.
T Consensus 10 fK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~~W~k~~~~~~~ 52 (89)
T d2jn6a1 10 FKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGSNHN 52 (89)
T ss_dssp HHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHHHHHHHHCCCST
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHCCCHHHHHHHHHHHhhccc
Confidence 455566542 2 47889999999999999999999887664
No 14
>d1lfpa_ e.39.1.1 (A:) Hypothetical protein aq1575 {Aquifex aeolicus [TaxId: 63363]}
Probab=34.76 E-value=31 Score=24.47 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=32.6
Q ss_pred hhhhhhHHHHhHHHHHHHHHHhCCChh---hhhhHHHHHHHcC
Q 033200 79 NQFRGKAIALHSQVITEFCKSIGADAK---QRQGLIRLAKKNG 118 (125)
Q Consensus 79 NklRGKaIaLHSQvIt~FC~~iG~d~k---~RQ~LIRlAk~NG 118 (125)
.+-|+|..+-+++-|+--++.=|.|++ +=..+|..||+++
T Consensus 14 D~~r~k~f~k~~r~I~~A~k~GG~DP~~N~~L~~ai~~Ak~~n 56 (243)
T d1lfpa_ 14 DAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKAN 56 (243)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHCSCGGGCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHHHHcC
Confidence 567999999999999999999899875 3455678888765
No 15
>d1blea_ c.38.1.1 (A:) Fructose permease, subunit IIb {Bacillus subtilis [TaxId: 1423]}
Probab=32.06 E-value=4.6 Score=27.86 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=29.7
Q ss_pred HhHHHHHHHHHHhCCC-----------hhhhhhHHHHHHHcCcccccc
Q 033200 88 LHSQVITEFCKSIGAD-----------AKQRQGLIRLAKKNGERLGFL 124 (125)
Q Consensus 88 LHSQvIt~FC~~iG~d-----------~k~RQ~LIRlAk~NG~kLGfL 124 (125)
+|-||++.+++.++++ ...+|.+++.|.=.|-++-++
T Consensus 13 IHGQV~~~W~~~~~~~~IiVvdD~~A~D~~~k~~l~ma~P~gvk~~i~ 60 (161)
T d1blea_ 13 IHGQILTRWIKVHAADRIIVVSDDIAQDEMRKTLILSVAPSNVKASAV 60 (161)
T ss_dssp SCTTHHHHHHHHHTCSEEEEECHHHHHCHHHHHHHHTSSCTTSEEEEE
T ss_pred hhhhhhhhhhcccCCCEEEEEcchhhCCHHHHHHHHhhCCCCCeEEEE
Confidence 6999999999999986 457888888888767666543
No 16
>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.25 E-value=23 Score=25.18 Aligned_cols=44 Identities=25% Similarity=0.417 Sum_probs=35.6
Q ss_pred chhhhhhhhHHHHhHHHHHHHHHHhCCChhhhhhHHHHHHHcCccc
Q 033200 76 KRFNQFRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERL 121 (125)
Q Consensus 76 krfNklRGKaIaLHSQvIt~FC~~iG~d~k~RQ~LIRlAk~NG~kL 121 (125)
++...|| +|..-|.+.+++--+--|+|++.= .|-.+|+++|+.+
T Consensus 86 e~~~ll~-~A~~~H~~~~~~a~~G~G~dRHL~-~L~~~a~~~g~~~ 129 (218)
T d1xl7a2 86 ERQQKML-EAFAKHNKMMKDCSHGKGFDRHLL-GLLLIAKEEGLPV 129 (218)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHTTCCSHHHHH-HHHHHHHHTTCCC
T ss_pred HHHHHHH-HHHHHHHHHHHHHHcCCChHHHHH-HHHHHHHHcCCCC
Confidence 3444555 899999999999999999998764 5777899999765
No 17
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}
Probab=28.86 E-value=31 Score=22.21 Aligned_cols=35 Identities=17% Similarity=0.337 Sum_probs=29.2
Q ss_pred HHhHHHHHHHHHH---------hCCChhhhhhHHHHHHHcCccc
Q 033200 87 ALHSQVITEFCKS---------IGADAKQRQGLIRLAKKNGERL 121 (125)
Q Consensus 87 aLHSQvIt~FC~~---------iG~d~k~RQ~LIRlAk~NG~kL 121 (125)
..|..++...++. ++.+.++=+.|+++|++||.++
T Consensus 78 ~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~ 121 (181)
T d1zh8a1 78 ELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTV 121 (181)
T ss_dssp GGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCE
T ss_pred cccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 5688888887764 5678888999999999999875
No 18
>d2p0ta1 a.290.1.1 (A:22-169) Uncharacterized protein PSPTO4464 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=27.10 E-value=36 Score=23.02 Aligned_cols=54 Identities=24% Similarity=0.373 Sum_probs=39.7
Q ss_pred hhhhhHHHhhhccc--------hhhhhhhhHHHHhHHHHHHHHHHh-CCChhhhhhHHHHHHH
Q 033200 63 APVVVLTRNIIGKK--------RFNQFRGKAIALHSQVITEFCKSI-GADAKQRQGLIRLAKK 116 (125)
Q Consensus 63 aPlVv~~r~ilG~k--------rfNklRGKaIaLHSQvIt~FC~~i-G~d~k~RQ~LIRlAk~ 116 (125)
.||...+..+-+.. +..+.|=+.|+==-.+|++|.+.. ++|..+=..|||-|++
T Consensus 61 e~i~~~l~~~~~~~~~~~~~~h~lE~wRdrLi~~~~~al~e~~~~~P~~DrQ~LRqLiR~A~k 123 (148)
T d2p0ta1 61 EAILVLLDQLDASTRQYNERFHNLERWRDRLIAGDDADLEKFVIEYPDADRQQLRSLIRQAQH 123 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHSTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCcchHHHHHHHHHHHHHH
Confidence 46655554444432 344568888866677999999997 9999888899999985
No 19
>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.28 E-value=29 Score=24.50 Aligned_cols=41 Identities=17% Similarity=0.072 Sum_probs=34.5
Q ss_pred hhhhhHHHHhHHHHHHHHHHhCCChhhhhhHHHHHHHcCccc
Q 033200 80 QFRGKAIALHSQVITEFCKSIGADAKQRQGLIRLAKKNGERL 121 (125)
Q Consensus 80 klRGKaIaLHSQvIt~FC~~iG~d~k~RQ~LIRlAk~NG~kL 121 (125)
++==+|+.-|.+.+.+--+--|+|++. =+|-.+|+++|+.+
T Consensus 88 ~ll~~A~~~H~~~~~~a~~G~G~dRHL-~aL~~~a~~~g~~~ 128 (214)
T d1nm8a2 88 ELLRKAVQAHRGYTDRAIRGEAFDRHL-LGLKLQAIEDLVST 128 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHH-HHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHH-HHHHHHHHHcCCCC
Confidence 344589999999999999999999887 56777889999765
No 20
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related protein TM1436 {Thermotoga maritima [TaxId: 2336]}
Probab=25.45 E-value=17 Score=25.87 Aligned_cols=26 Identities=38% Similarity=0.442 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCh--hhhhhHHHHHHHcC
Q 033200 93 ITEFCKSIGADA--KQRQGLIRLAKKNG 118 (125)
Q Consensus 93 It~FC~~iG~d~--k~RQ~LIRlAk~NG 118 (125)
=-+|++.+++|. .+|.++|+.||+.|
T Consensus 63 av~flk~~~~dGIISTk~~~i~~Ak~~G 90 (172)
T d1vkfa_ 63 AILFVKKAGADGIITIKPKNYVVAKKNG 90 (172)
T ss_dssp HHHHHHHHTCSEEEESCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCHHHHHHHHHcC
Confidence 357777788875 78999999999987
No 21
>d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=23.98 E-value=16 Score=26.97 Aligned_cols=26 Identities=31% Similarity=0.521 Sum_probs=20.9
Q ss_pred HHHHHhC------------CChhhhhhHHHHHHHcCcc
Q 033200 95 EFCKSIG------------ADAKQRQGLIRLAKKNGER 120 (125)
Q Consensus 95 ~FC~~iG------------~d~k~RQ~LIRlAk~NG~k 120 (125)
+.|+.+| ++.++|..+|+.|+++|=+
T Consensus 92 ~~~~~lGf~~iEiSdg~~~i~~~~~~~~I~~~~~~G~~ 129 (251)
T d1qwga_ 92 NECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFM 129 (251)
T ss_dssp HHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCCCE
Confidence 4577777 5679999999999999843
No 22
>d1j09a1 a.97.1.1 (A:306-468) C-terminal domain of glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]}
Probab=23.79 E-value=41 Score=20.89 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCChhhhhhHHHHHH
Q 033200 90 SQVITEFCKSIGADAKQRQGLIRLAK 115 (125)
Q Consensus 90 SQvIt~FC~~iG~d~k~RQ~LIRlAk 115 (125)
.++|+++|+..|+..++--..||+|=
T Consensus 108 ~~~i~~~~~~~~ik~~~v~~plR~al 133 (163)
T d1j09a1 108 EALLRGFAAEKGVKLGQVAQPLRAAL 133 (163)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccccchHhhh
Confidence 57889999999999998888999884
No 23
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=22.67 E-value=40 Score=22.31 Aligned_cols=25 Identities=4% Similarity=0.142 Sum_probs=20.9
Q ss_pred hCCChhhhhhHHHHHHHcCcccccc
Q 033200 100 IGADAKQRQGLIRLAKKNGERLGFL 124 (125)
Q Consensus 100 iG~d~k~RQ~LIRlAk~NG~kLGfL 124 (125)
..+.+.+|..+++.-+++|+..++.
T Consensus 95 ar~~p~~K~~lv~~l~~~g~~Va~v 119 (168)
T d1wpga2 95 ARVEPSHKSKIVEYLQSYDEITAMT 119 (168)
T ss_dssp ESCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hccchhHHHHHHHHHHhcccceeEE
Confidence 3567889999999999999988763
No 24
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.14 E-value=19 Score=20.90 Aligned_cols=20 Identities=30% Similarity=0.396 Sum_probs=16.7
Q ss_pred hHHHHhHHHHHHHHHHhCCC
Q 033200 84 KAIALHSQVITEFCKSIGAD 103 (125)
Q Consensus 84 KaIaLHSQvIt~FC~~iG~d 103 (125)
+.++.+|++|+++++..|.+
T Consensus 17 ~~~a~~S~tI~~ml~~~~~~ 36 (61)
T d1fs1b2 17 VEIAKQSVTIKTMLEDLGMD 36 (61)
T ss_dssp GGGGGTCHHHHHHHHHTCCS
T ss_pred HHHHHHhHHHHHHHhcCCCC
Confidence 46889999999999987754
No 25
>d2i0za2 e.74.1.1 (A:193-361) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}
Probab=20.70 E-value=42 Score=21.83 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=24.0
Q ss_pred HhHHHHHHHHHHhCCCh---------hhhhhHHHHHHH
Q 033200 88 LHSQVITEFCKSIGADA---------KQRQGLIRLAKK 116 (125)
Q Consensus 88 LHSQvIt~FC~~iG~d~---------k~RQ~LIRlAk~ 116 (125)
+|..++..+|+..|+|. ++|+.|++.-|+
T Consensus 115 lp~~l~~~ll~~~~i~~~~~~~~ls~~~~~~L~~~Lk~ 152 (169)
T d2i0za2 115 VPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKE 152 (169)
T ss_dssp SCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHcCCcccCCHHHCCHHHHHHHHHHHhC
Confidence 77889999999999875 567888887764
Done!