Query 033206
Match_columns 125
No_of_seqs 111 out of 336
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 18:22:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033206.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033206hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2exna1 b.165.1.1 (A:1-128) Hy 16.1 18 0.0013 23.3 0.5 11 26-36 9-19 (128)
2 d2ixma1 a.268.1.1 (A:23-322) S 7.1 1.8E+02 0.013 21.4 3.6 45 12-60 133-178 (300)
3 d2ixna1 a.268.1.1 (A:3-299) Se 6.6 1.6E+02 0.012 21.6 3.0 47 12-60 133-179 (297)
4 d2ixoa1 a.268.1.1 (A:2-317) Se 5.9 2.3E+02 0.016 21.0 3.6 45 12-60 147-191 (316)
5 d1o6da_ c.116.1.3 (A:) Hypothe 4.8 1.6E+02 0.011 18.7 1.8 17 61-77 129-145 (147)
6 d1jt6a2 a.121.1.1 (A:73-187) M 3.6 1.3E+02 0.0093 18.6 0.4 34 69-103 77-111 (115)
7 d2axtj1 f.23.32.1 (J:7-40) Pho 3.5 3.4E+02 0.025 13.6 2.5 18 92-109 7-24 (34)
8 d1gjsa_ a.8.1.2 (A:) IgG bindi 3.5 90 0.0066 18.3 -0.4 19 21-39 42-61 (65)
9 d1ns5a_ c.116.1.3 (A:) Hypothe 3.3 2.5E+02 0.018 17.6 1.8 17 61-77 132-148 (153)
10 d1to0a_ c.116.1.3 (A:) Hypothe 3.3 2.5E+02 0.018 17.7 1.8 17 61-77 137-153 (157)
No 1
>d2exna1 b.165.1.1 (A:1-128) Hypothetical protein BB0938 {Bordetella bronchiseptica [TaxId: 518]}
Probab=16.10 E-value=18 Score=23.27 Aligned_cols=11 Identities=18% Similarity=0.489 Sum_probs=8.5
Q ss_pred hhhccccccch
Q 033206 26 IKSCSGVSLKT 36 (125)
Q Consensus 26 ~kS~~GiSlkt 36 (125)
=|||.|+|+..
T Consensus 9 IKsc~g~~~~~ 19 (128)
T d2exna1 9 IAECGATTQSE 19 (128)
T ss_dssp ETTTEEECCGG
T ss_pred ccccCCccccc
Confidence 38999999853
No 2
>d2ixma1 a.268.1.1 (A:23-322) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.07 E-value=1.8e+02 Score=21.38 Aligned_cols=45 Identities=22% Similarity=0.254 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhhhhccccccch-hHHHHHHHHhhhhhcccchHHHHH
Q 033206 12 HLASVLVLLLKIHTIKSCSGVSLKT-QELYALVFTTRYLDIFTDFVSIRL 60 (125)
Q Consensus 12 hl~s~~iLl~ki~~~kS~~GiSlkt-Q~ly~~vf~~Ryldl~~~~~s~Yn 60 (125)
|=+++++.+..+.+. |+--++ ..-=++....||+++.+....+|+
T Consensus 133 HEL~F~~fL~~L~kl----gil~~~d~~~~vL~vF~~Yl~l~R~Lq~~Y~ 178 (300)
T d2ixma1 133 HEAAFAAFLCCLCKI----GVLRVDDQIAIVFKVFNRYLEVMRKLQKTYR 178 (300)
T ss_dssp HHHHHHHHHHHHHHT----TSSCGGGHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHc----CCCchhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 555666666666653 332222 222344556799999999999995
No 3
>d2ixna1 a.268.1.1 (A:3-299) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.63 E-value=1.6e+02 Score=21.64 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhhhhccccccchhHHHHHHHHhhhhhcccchHHHHH
Q 033206 12 HLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRL 60 (125)
Q Consensus 12 hl~s~~iLl~ki~~~kS~~GiSlktQ~ly~~vf~~Ryldl~~~~~s~Yn 60 (125)
|=+++++.+..+.+.+-- +.+-.+..+ ++....||+++.+....+|+
T Consensus 133 HEL~Fl~fL~~L~~~gil-~~~~d~~a~-vL~vF~rYl~l~R~Lq~~Y~ 179 (297)
T d2ixna1 133 HELNFMCLLYGLYSYGIF-NLSNDSTNL-VLKVFIEYLKIMRILETKYW 179 (297)
T ss_dssp HHHHHHHHHHHHHHTTSC-CHHHHHHHH-HHTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCC-CccchhHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 445555555555543210 001122323 44555699999999999995
No 4
>d2ixoa1 a.268.1.1 (A:2-317) Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.91 E-value=2.3e+02 Score=21.01 Aligned_cols=45 Identities=9% Similarity=0.159 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhhhhccccccchhHHHHHHHHhhhhhcccchHHHHH
Q 033206 12 HLASVLVLLLKIHTIKSCSGVSLKTQELYALVFTTRYLDIFTDFVSIRL 60 (125)
Q Consensus 12 hl~s~~iLl~ki~~~kS~~GiSlktQ~ly~~vf~~Ryldl~~~~~s~Yn 60 (125)
|=++++.-+..+.+.+-- .-.+..+ ++....||+++......+|+
T Consensus 147 HEL~Fl~fL~~L~~~gi~---~~~~~a~-vl~vF~~Yl~l~R~Lq~~Y~ 191 (316)
T d2ixoa1 147 HELSFMATVAALDMLGMF---PHHRGAD-VFLLFNKYYTIMRRLILTYT 191 (316)
T ss_dssp HHHHHHHHHHHHHHTTCS---TTCCHHH-HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCC---cccchhH-HHHHHHHHHHHHHHHHHHhc
Confidence 445555555555554321 1122222 44556799999999999985
No 5
>d1o6da_ c.116.1.3 (A:) Hypothetical protein TM0844 {Thermotoga maritima [TaxId: 2336]}
Probab=4.82 E-value=1.6e+02 Score=18.74 Aligned_cols=17 Identities=18% Similarity=0.481 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhhhhhc
Q 033206 61 MFSVIVEIAYRGLYILN 77 (125)
Q Consensus 61 tFSiyLEG~yR~ly~~~ 77 (125)
+=-+-+|=+||+.-++|
T Consensus 129 ~rv~l~EQlYRa~~I~~ 145 (147)
T d1o6da_ 129 TVLIVLEQIFRAFKIIH 145 (147)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44577889999987764
No 6
>d1jt6a2 a.121.1.1 (A:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=3.59 E-value=1.3e+02 Score=18.58 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=22.6
Q ss_pred HHhhhhhhcceeEeeeCC-cccchHHhHHHHHHHHH
Q 033206 69 AYRGLYILNWVYRYFTEP-HYVHWIPWISGLVQTLL 103 (125)
Q Consensus 69 ~yR~ly~~~Wi~ry~~~~-~~~~~~~i~~givQt~l 103 (125)
..=++..+||+..++..+ .. ++-.+.-..+|.++
T Consensus 77 ~~~il~~lng~~~Wy~~~g~~-~~~~la~~~~~l~L 111 (115)
T d1jt6a2 77 SKIAANAVNGIVTFTHEQNIN-ERIKLMNKFSQIFL 111 (115)
T ss_dssp HHHHHHHHHHHHHSCTTSCHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCC-CHHHHHHHHHHHHH
Confidence 334677888988866553 43 66667677777665
No 7
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=3.49 E-value=3.4e+02 Score=13.65 Aligned_cols=18 Identities=22% Similarity=0.554 Sum_probs=13.7
Q ss_pred HHhHHHHHHHHHHhhhhh
Q 033206 92 IPWISGLVQTLLYADFFY 109 (125)
Q Consensus 92 ~~i~~givQt~ly~DFfy 109 (125)
+..++|+.-..+.+=|||
T Consensus 7 v~tv~G~~vi~~vG~FfY 24 (34)
T d2axtj1 7 VATVAGMGVIVIVGLFFY 24 (34)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eeehhhhhhHhheeeeee
Confidence 455788887888888887
No 8
>d1gjsa_ a.8.1.2 (A:) IgG binding protein G {Streptococcus sp., group G [TaxId: 1306]}
Probab=3.48 E-value=90 Score=18.26 Aligned_cols=19 Identities=32% Similarity=0.364 Sum_probs=13.5
Q ss_pred HHHHhhhhcccc-ccchhHH
Q 033206 21 LKIHTIKSCSGV-SLKTQEL 39 (125)
Q Consensus 21 ~ki~~~kS~~Gi-SlktQ~l 39 (125)
-.|.+.|++.|+ ++|.|++
T Consensus 42 nlIN~AKTVEGV~aLk~eIl 61 (65)
T d1gjsa_ 42 NLINNAKTVEGVKALIDEIL 61 (65)
T ss_dssp HHHHTCCSHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHHHHHHH
Confidence 346788888886 5676665
No 9
>d1ns5a_ c.116.1.3 (A:) Hypothetical protein YbeA {Escherichia coli [TaxId: 562]}
Probab=3.29 E-value=2.5e+02 Score=17.63 Aligned_cols=17 Identities=24% Similarity=0.327 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhhhhhhc
Q 033206 61 MFSVIVEIAYRGLYILN 77 (125)
Q Consensus 61 tFSiyLEG~yR~ly~~~ 77 (125)
+=-+-+|=+||+.-+++
T Consensus 132 ar~~l~EQlYRa~~I~~ 148 (153)
T d1ns5a_ 132 VRVLVAESLYRAWSITT 148 (153)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44678899999987764
No 10
>d1to0a_ c.116.1.3 (A:) Hypothetical protein YydA {Bacillus subtilis [TaxId: 1423]}
Probab=3.26 E-value=2.5e+02 Score=17.70 Aligned_cols=17 Identities=35% Similarity=0.466 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhhhhhhc
Q 033206 61 MFSVIVEIAYRGLYILN 77 (125)
Q Consensus 61 tFSiyLEG~yR~ly~~~ 77 (125)
+=-+-+|=+||+.-+.+
T Consensus 137 ~r~~l~EQiYRa~tI~~ 153 (157)
T d1to0a_ 137 MRLILVEQIYRAFRINR 153 (157)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 44678889999987764
Done!