BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033208
(125 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225428637|ref|XP_002284808.1| PREDICTED: uncharacterized protein LOC100255593 [Vitis vinifera]
Length = 126
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 105/127 (82%), Gaps = 3/127 (2%)
Query: 1 MATASATLSPATFISATAAAGSCR--RRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVST 58
MATASATLSP+TF SA A AG R +RR V +I GLNSF GLKA NS+ SLG+PV T
Sbjct: 1 MATASATLSPSTF-SAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCT 59
Query: 59 EQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIE 118
EQ+FAKIV S+++P +G+G+ GG L+STCNA EIFRIAAIMNGLVL+GVAVGFVLLRIE
Sbjct: 60 EQSFAKIVGSLKSPSQGKGRGGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIE 119
Query: 119 ASVEESE 125
ASVEE+E
Sbjct: 120 ASVEEAE 126
>gi|147855053|emb|CAN82364.1| hypothetical protein VITISV_027615 [Vitis vinifera]
Length = 126
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 104/127 (81%), Gaps = 3/127 (2%)
Query: 1 MATASATLSPATFISATAAAGSCR--RRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVST 58
MATASATLSP+TF SA A AG R +RR V +I GLNSF GLKA NS+ SLG+PV T
Sbjct: 1 MATASATLSPSTF-SAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCT 59
Query: 59 EQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIE 118
EQ+FAKIV S+++ +G+G+ GG L+STCNA EIFRIAAIMNGLVL+GVAVGFVLLRIE
Sbjct: 60 EQSFAKIVXSLKSXSQGKGRGGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRIE 119
Query: 119 ASVEESE 125
ASVEE+E
Sbjct: 120 ASVEEAE 126
>gi|449523413|ref|XP_004168718.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210164
[Cucumis sativus]
Length = 124
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MATASATLS A +A +AGS RR+R +I+GLNSF GLKA N++ SLG+PV +Q
Sbjct: 1 MATASATLSTAMSSAAPISAGS-RRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQ 59
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
+FAKIVSS++ P KG G+ GG L+STCNAA EIFRIAAI+NGLVLIGVAVGFVLLRIEAS
Sbjct: 60 SFAKIVSSLKYPSKGRGKGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS 119
Query: 121 VEESE 125
VEE+E
Sbjct: 120 VEEAE 124
>gi|351723627|ref|NP_001235238.1| uncharacterized protein LOC100500243 [Glycine max]
gi|255629825|gb|ACU15263.1| unknown [Glycine max]
Length = 124
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MA ASAT +PAT ++ + +RR V +I GLNSFGGLKAQNS+TSLG+PV TEQ
Sbjct: 1 MAMASAT-TPATITVVAISSVASTKRRERNVHFIRGLNSFGGLKAQNSVTSLGLPVCTEQ 59
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
FAK+VSS++ +G+ GG +STCNAA EIF+IAAIMNGLVL+GVA+GFVLLR+EA
Sbjct: 60 CFAKVVSSLKYQSSSKGRGGGAASSTCNAAGEIFQIAAIMNGLVLVGVAIGFVLLRVEAF 119
Query: 121 VEESE 125
VEESE
Sbjct: 120 VEESE 124
>gi|224123402|ref|XP_002330306.1| predicted protein [Populus trichocarpa]
gi|118486604|gb|ABK95140.1| unknown [Populus trichocarpa]
gi|222871341|gb|EEF08472.1| predicted protein [Populus trichocarpa]
Length = 122
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 102/125 (81%), Gaps = 3/125 (2%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MAT SAT SP T + A+A S +R+ V+YITGLNSFGGLKA NS++SLG+ V +EQ
Sbjct: 1 MATTSATFSPPTLV---ASAVSSPKRKQTNVNYITGLNSFGGLKAHNSVSSLGLSVGSEQ 57
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
+FAKIVSS++AP KG+G SGG L+STC+ EIFRIAA+MNGLVL+GVAVGFVLLRIEA
Sbjct: 58 SFAKIVSSLKAPSKGKGGSGGALSSTCSNVGEIFRIAAVMNGLVLVGVAVGFVLLRIEAF 117
Query: 121 VEESE 125
VEE+E
Sbjct: 118 VEETE 122
>gi|224098449|ref|XP_002334556.1| predicted protein [Populus trichocarpa]
gi|222873166|gb|EEF10297.1| predicted protein [Populus trichocarpa]
Length = 94
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 86/94 (91%)
Query: 29 VKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCN 88
+KV+YITGL+SFGGLKA N+++SLG+PV TEQ+FAK+VSS+RAP KG+G+SGG L+STC+
Sbjct: 1 IKVNYITGLDSFGGLKAHNNVSSLGLPVCTEQSFAKVVSSLRAPSKGKGRSGGALSSTCS 60
Query: 89 AASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVE 122
EIFRIAAIMNGLVL+GVAVGFVLLR+EA VE
Sbjct: 61 DVGEIFRIAAIMNGLVLVGVAVGFVLLRVEAFVE 94
>gi|224163891|ref|XP_002338613.1| predicted protein [Populus trichocarpa]
gi|222873018|gb|EEF10149.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 87/97 (89%)
Query: 26 RRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTS 85
R+ +KV+YITGL+SFGGLKA +++SLG+PV TEQ+FAK+VSS+RAP KG+G+SGG L+S
Sbjct: 2 RKQIKVNYITGLDSFGGLKAHINVSSLGLPVCTEQSFAKVVSSLRAPSKGKGRSGGALSS 61
Query: 86 TCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVE 122
TC+ EIFRIAAIMNGLVL+GVAVGFVLLR+EA VE
Sbjct: 62 TCSDVGEIFRIAAIMNGLVLVGVAVGFVLLRVEAFVE 98
>gi|449438446|ref|XP_004136999.1| PREDICTED: uncharacterized protein LOC101210164 isoform 1 [Cucumis
sativus]
Length = 169
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MATASATLS A +A +AGS RR+R +I+GLNSF GLKA N++ SLG+PV +Q
Sbjct: 45 MATASATLSTAMSSAAPISAGS-RRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQ 103
Query: 61 AFAKIVSSVRAPGKGEGQSGGV-LTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEA 119
+FAKIVSS++ P KG+G++GG L+STCNAA EIFRIAAI+NGLVLIGVAVGFVLLRIEA
Sbjct: 104 SFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 163
Query: 120 SVEESE 125
SVEE+E
Sbjct: 164 SVEEAE 169
>gi|449438448|ref|XP_004137000.1| PREDICTED: uncharacterized protein LOC101210164 isoform 2 [Cucumis
sativus]
Length = 125
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MATASATLS A +A +AGS RR+R +I+GLNSF GLKA N++ SLG+PV +Q
Sbjct: 1 MATASATLSTAMSSAAPISAGS-RRQRQTNAHFISGLNSFSGLKAHNNVVSLGLPVCADQ 59
Query: 61 AFAKIVSSVRAPGKGEGQSGG-VLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEA 119
+FAKIVSS++ P KG+G++GG L+STCNAA EIFRIAAI+NGLVLIGVAVGFVLLRIEA
Sbjct: 60 SFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEA 119
Query: 120 SVEESE 125
SVEE+E
Sbjct: 120 SVEEAE 125
>gi|225458473|ref|XP_002284054.1| PREDICTED: uncharacterized protein LOC100264352 isoform 1 [Vitis
vinifera]
gi|302142389|emb|CBI19592.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 3/125 (2%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MATASA L PAT + ++GS ++ KV Y+ GLNSFGGLKA NS+ ++G+P+ TEQ
Sbjct: 1 MATASAILCPATVTARVRSSGSKTQKGEKKVVYVAGLNSFGGLKAHNSVVAMGVPMCTEQ 60
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
FA +VSS++A G+G G + L+STC+AASEIFRIAAIMN LVLIGVAVGFVLLRIEAS
Sbjct: 61 CFANVVSSLKAKGRGGGGA---LSSTCSAASEIFRIAAIMNALVLIGVAVGFVLLRIEAS 117
Query: 121 VEESE 125
VEESE
Sbjct: 118 VEESE 122
>gi|224137326|ref|XP_002327098.1| predicted protein [Populus trichocarpa]
gi|222835413|gb|EEE73848.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 93/125 (74%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MAT +A SPAT A GS +R+ KV Y+ G+NS+GGLKA NS+ SL MPVSTEQ
Sbjct: 1 MATTAAAFSPATITGAVVDFGSKIPKRTNKVVYMGGMNSYGGLKAHNSVLSLNMPVSTEQ 60
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
FAK+VSS+RA G+G GG L+S C A EIFRIAAIMNGLVL+GVAVGFVLLR+EA
Sbjct: 61 CFAKVVSSLRAASNGKGGGGGALSSKCGDAGEIFRIAAIMNGLVLVGVAVGFVLLRVEAW 120
Query: 121 VEESE 125
EE+E
Sbjct: 121 YEENE 125
>gi|351723265|ref|NP_001236249.1| uncharacterized protein LOC100500315 [Glycine max]
gi|255630004|gb|ACU15354.1| unknown [Glycine max]
Length = 122
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 7/126 (5%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MA A+A + P A GS ++R V ++ GLNSFGGLKA N + SLG+P+STE+
Sbjct: 1 MAMATAVVCPQNITGAIV--GSPKKR----VVHVRGLNSFGGLKASNGVVSLGLPMSTEK 54
Query: 61 AFAKIVSSVRAP-GKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEA 119
FAK+VSSV+A G+G+ GG L+STCNAA EIF IAAI+NGLVL+GVAVGFVLLR+EA
Sbjct: 55 CFAKVVSSVKAATSNGKGKGGGALSSTCNAAGEIFTIAAIINGLVLVGVAVGFVLLRVEA 114
Query: 120 SVEESE 125
VEESE
Sbjct: 115 WVEESE 120
>gi|351722458|ref|NP_001236221.1| uncharacterized protein LOC100306520 [Glycine max]
gi|255628769|gb|ACU14729.1| unknown [Glycine max]
Length = 124
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 95/128 (74%), Gaps = 9/128 (7%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MA A+A + P A ++ S ++R V ++ G+NSFGGLKA N + SLG+P+STE+
Sbjct: 1 MAMATAVVCPQNITGAIVSSPSKTKKRVV---HVRGINSFGGLKASNGVVSLGIPMSTEK 57
Query: 61 AFAKIVSSVRAP---GKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRI 117
FAK+VSSV+A GKG+G G L+STCNAA EIF IAAI+NGLVL+GVAVGFVLLR+
Sbjct: 58 CFAKVVSSVKAATSNGKGKG---GALSSTCNAAGEIFTIAAIINGLVLVGVAVGFVLLRV 114
Query: 118 EASVEESE 125
EA VEESE
Sbjct: 115 EAWVEESE 122
>gi|388517603|gb|AFK46863.1| unknown [Lotus japonicus]
Length = 132
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 1 MATASATLSPATFISATAAAGS---CRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVS 57
MA A ATL P + A ++ S ++R K ++ GLNSFGGLKA N + S+G+P S
Sbjct: 1 MAMAGATLCPQSITGAMVSSSSNTTATKKRMTKAIHVRGLNSFGGLKATNDVISMGLPSS 60
Query: 58 TEQAFAKIVSSVRAPGK--GEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLL 115
TE FAKIVSSV+A G G+ GG L+STCNAA EIF IAAI+NGL L+GVAVGFVLL
Sbjct: 61 TEHCFAKIVSSVKATSSSTGRGKRGGALSSTCNAAGEIFTIAAIINGLTLVGVAVGFVLL 120
Query: 116 RIEASVEE 123
RIEA EE
Sbjct: 121 RIEAWEEE 128
>gi|255538458|ref|XP_002510294.1| plastoquinol-plastocyanin reductase, putative [Ricinus communis]
gi|223550995|gb|EEF52481.1| plastoquinol-plastocyanin reductase, putative [Ricinus communis]
Length = 128
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
Query: 16 ATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVR---AP 72
A + G+ ++R KV YI GLNSFGGLKA NS+ SLGMPV TEQ FA VSS++ A
Sbjct: 16 AAVSFGNKPQKRMDKVVYIRGLNSFGGLKAHNSVVSLGMPVCTEQCFANFVSSIKAAAAA 75
Query: 73 GKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
G+G+ GG L+S C+ EIF+IAAIMNGLVL+GVA+GFVLLRIEA VEESE
Sbjct: 76 SNGKGKGGGALSSKCSKIGEIFQIAAIMNGLVLVGVAIGFVLLRIEAFVEESE 128
>gi|6984136|gb|AAF34768.1|AF227623_1 unknown [Euphorbia esula]
Length = 128
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
Query: 1 MATASATLSPATFISATAAA-GSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTE 59
MAT +A+ SPA +A+ G +++ K+ YI GLNS+GGLKA N++ SLGMPVSTE
Sbjct: 1 MATTAASFSPARISAASVVTIGHKSQKKESKIVYIRGLNSYGGLKAHNTVASLGMPVSTE 60
Query: 60 QAFAKIVSSVR-APGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIE 118
Q FA ++SS++ + G+G+SGG L S C+ EI +IAA +NGL L+GVAVGFVLLRIE
Sbjct: 61 QGFANVISSLKTSSSNGKGKSGGALGSKCSKIGEIVQIAATLNGLTLLGVAVGFVLLRIE 120
Query: 119 ASVEES 124
A VEES
Sbjct: 121 AFVEES 126
>gi|351728083|ref|NP_001235647.1| uncharacterized protein LOC100306224 precursor [Glycine max]
gi|255627925|gb|ACU14307.1| unknown [Glycine max]
Length = 127
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Query: 1 MATASAT-LSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTE 59
MA ASAT L+ T ++A+ + GS RR V++ GLNSFGGLKAQN++T LG+PV TE
Sbjct: 1 MAMASATTLATITVVAASPSVGS-RRSGKRNVNFTRGLNSFGGLKAQNNVTLLGLPVCTE 59
Query: 60 QAFAKIVSSVRAPGKG--EGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRI 117
Q FAK+VSS++ P +G+ GG STCNAA EIF+IAAIMNGLVL+GVA+GFVLLR+
Sbjct: 60 QCFAKVVSSLKYPSSSSRKGRGGGAAFSTCNAAGEIFQIAAIMNGLVLVGVAIGFVLLRV 119
Query: 118 EASVEESE 125
EA VEESE
Sbjct: 120 EAFVEESE 127
>gi|297822179|ref|XP_002878972.1| hypothetical protein ARALYDRAFT_901414 [Arabidopsis lyrata subsp.
lyrata]
gi|297324811|gb|EFH55231.1| hypothetical protein ARALYDRAFT_901414 [Arabidopsis lyrata subsp.
lyrata]
Length = 190
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 14/131 (10%)
Query: 1 MATASATLSPATFISAT-----AAAGSCRRRRSVKVSYITGLNSFGGLKAQNS-LTSLGM 54
MATA+A PA IS T + +G +++ +KVSYITGLNS+GGLKAQN+ + S+G
Sbjct: 66 MATAAA---PAV-ISWTRSGIVSKSGQTQKKTEMKVSYITGLNSYGGLKAQNNKVVSMGS 121
Query: 55 PVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVL 114
P+ TEQ FA +V S+ KG +GG L++TCNA EIF+IAAIMN L L+GVAVGFVL
Sbjct: 122 PLCTEQCFANVVVSL----KGRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVL 177
Query: 115 LRIEASVEESE 125
LRIE SVEE+E
Sbjct: 178 LRIETSVEEAE 188
>gi|18401147|ref|NP_565623.1| putative cytochrome b6f complex subunit [Arabidopsis thaliana]
gi|30683145|ref|NP_850079.1| putative cytochrome b6f complex subunit [Arabidopsis thaliana]
gi|14030737|gb|AAK53043.1|AF375459_1 At2g26500 [Arabidopsis thaliana]
gi|16974525|gb|AAL31172.1| At2g26500/T9J22.17 [Arabidopsis thaliana]
gi|20196942|gb|AAM14841.1| expressed protein [Arabidopsis thaliana]
gi|21618005|gb|AAM67055.1| unknown [Arabidopsis thaliana]
gi|330252751|gb|AEC07845.1| putative cytochrome b6f complex subunit [Arabidopsis thaliana]
gi|330252752|gb|AEC07846.1| putative cytochrome b6f complex subunit [Arabidopsis thaliana]
Length = 125
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 14/131 (10%)
Query: 1 MATASATLSPATFISAT-----AAAGSCRRRRSVKVSYITGLNSFGGLKAQNS-LTSLGM 54
MATA+A PA IS T + +G +++ +KVSYITGLNS+GGLKAQN+ + S+G
Sbjct: 1 MATAAA---PAV-ISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGS 56
Query: 55 PVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVL 114
P+ TEQ FA +V S+ KG +GG L++TCNA EIF+IAAIMN L L+GVAVGFVL
Sbjct: 57 PLCTEQCFANVVMSL----KGRRGNGGALSTTCNAVGEIFKIAAIMNALTLVGVAVGFVL 112
Query: 115 LRIEASVEESE 125
LRIE SVEE+E
Sbjct: 113 LRIETSVEEAE 123
>gi|217075026|gb|ACJ85873.1| unknown [Medicago truncatula]
gi|388505206|gb|AFK40669.1| unknown [Medicago truncatula]
Length = 127
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
Query: 1 MATASATLSPATFISATAAAGSCRR--RRSVKVSYITGLNSFGGLKAQNS-LTSLGMPVS 57
MATASAT + ++ G+ R ++ V +ITGLNS+ GLKAQNS +TSLG+P+
Sbjct: 1 MATASATTPSTITVVGSSVIGTKSRSTKKGNNVKFITGLNSYNGLKAQNSTVTSLGVPMC 60
Query: 58 TEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRI 117
TEQAFAK++SS++ P G + G +STCNAA EIF+IAAIMNGL L+GVAVGFVLLRI
Sbjct: 61 TEQAFAKVMSSLKYPSNGGRRGG-AGSSTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 119
Query: 118 EASVEESE 125
EA+VEE+E
Sbjct: 120 EAAVEEAE 127
>gi|388511653|gb|AFK43888.1| unknown [Lotus japonicus]
Length = 132
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 88/128 (68%), Gaps = 5/128 (3%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVS---YITGLNSFGGLKAQNSLTSLGMPVS 57
MA A ATL P + A ++ S +++ ++ GLNSFGGLKA N + S+G+P S
Sbjct: 1 MAMAGATLCPQSITGAMVSSSSNTTTTKKRMTKAIHVRGLNSFGGLKATNDVISMGLPSS 60
Query: 58 TEQAFAKIVSSVRAPGK--GEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLL 115
TE FAKIVSSV+A G G+ GG L+STCNAA EIF IAAI+NGL L+GVAVGFVLL
Sbjct: 61 TEHCFAKIVSSVKATSSSTGRGKRGGALSSTCNAAGEIFTIAAIINGLTLVGVAVGFVLL 120
Query: 116 RIEASVEE 123
RIEA EE
Sbjct: 121 RIEAWEEE 128
>gi|3090403|emb|CAA06667.1| cytochrome b6f complex subunit [Arabidopsis thaliana]
Length = 96
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 78/98 (79%), Gaps = 5/98 (5%)
Query: 29 VKVSYITGLNSFGGLKAQNS-LTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTC 87
+KVSYITGLNS+GGLKAQN+ + S+G P+ TEQ FA +V S+ KG +GG L++TC
Sbjct: 1 MKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVVMSL----KGRRGNGGALSTTC 56
Query: 88 NAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
NA EIF+IAAIMN L L+GVAVGFVLLRIE SVEE+E
Sbjct: 57 NAVGEIFKIAAIMNALTLVGVAVGFVLLRIETSVEEAE 94
>gi|115455555|ref|NP_001051378.1| Os03g0765900 [Oryza sativa Japonica Group]
gi|31415934|gb|AAP50955.1| unknown protein [Oryza sativa Japonica Group]
gi|108711254|gb|ABF99049.1| cytochrome b6f complex subunit, putative, expressed [Oryza sativa
Japonica Group]
gi|113549849|dbj|BAF13292.1| Os03g0765900 [Oryza sativa Japonica Group]
gi|125545832|gb|EAY91971.1| hypothetical protein OsI_13659 [Oryza sativa Indica Group]
gi|125588031|gb|EAZ28695.1| hypothetical protein OsJ_12709 [Oryza sativa Japonica Group]
Length = 118
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 88/120 (73%), Gaps = 3/120 (2%)
Query: 6 ATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKI 65
A+LS AT + + A A R+RS V+Y+ G+N++ GLKA N +T LG+ + + +FAK+
Sbjct: 2 ASLSMATTLPSLAGAAPAARKRS-GVTYVEGMNAYSGLKALNKVTLLGVRKTADYSFAKV 60
Query: 66 VSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
V+ + +P G+ + GG + CNAA EIFRIA IMNGLVL+GVAVGFVLLR+EA+VEESE
Sbjct: 61 VAKL-SPAGGKSR-GGAFGAQCNAAGEIFRIAVIMNGLVLVGVAVGFVLLRVEAAVEESE 118
>gi|226491858|ref|NP_001147411.1| plastoquinol-plastocyanin reductase [Zea mays]
gi|195611180|gb|ACG27420.1| plastoquinol-plastocyanin reductase [Zea mays]
gi|195617306|gb|ACG30483.1| plastoquinol-plastocyanin reductase [Zea mays]
Length = 117
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 25 RRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLT 84
++RS V+Y+ G+N++ GLK N + LG+ + + +FAK+V+S+ G+ + GG
Sbjct: 19 KKRSGGVTYVEGMNAYSGLKGLNKVNMLGVRKTADYSFAKVVASLSPAGRK--RRGGAFG 76
Query: 85 STCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
+ NAA+EIFRIAA MNGLVL+GVAVGFVLLR+EA+VEESE
Sbjct: 77 AQMNAAAEIFRIAATMNGLVLVGVAVGFVLLRVEAAVEESE 117
>gi|242038003|ref|XP_002466396.1| hypothetical protein SORBIDRAFT_01g007050 [Sorghum bicolor]
gi|241920250|gb|EER93394.1| hypothetical protein SORBIDRAFT_01g007050 [Sorghum bicolor]
Length = 118
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Query: 14 ISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPG 73
I + AA + ++R S V+Y+ G+N++ GLK N + LG+ + + +FAKIV+S+ G
Sbjct: 9 IPSLAAPAAAKKRSSGGVTYVEGMNAYSGLKGLNKVNMLGVRKTADYSFAKIVASLSPAG 68
Query: 74 KGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
K + G + N A EIFRIAA MNGLVL+GVAVGFVLLR+EA+VEE+E
Sbjct: 69 KN--RRGSAFGAQMNVAGEIFRIAATMNGLVLVGVAVGFVLLRVEAAVEEAE 118
>gi|168054581|ref|XP_001779709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668907|gb|EDQ55505.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 37 LNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRI 96
L +FGGLK+ + +T +GMPVSTE+AFA SV+A G GG L + C+ ASEIFRI
Sbjct: 6 LKNFGGLKSDSQVTRMGMPVSTEEAFA----SVKAKCSGRVSRGGALAANCDVASEIFRI 61
Query: 97 AAIMNGLVLIGVAVGFVLLRIEASVEESE 125
IM+GL L+G+A+GFVLLR+EA+VEESE
Sbjct: 62 VPIMSGLTLVGIAIGFVLLRVEAAVEESE 90
>gi|414873040|tpg|DAA51597.1| TPA: plastoquinol-plastocyanin reductase [Zea mays]
Length = 117
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 25 RRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLT 84
++RS V+Y+ G+N++ GLK N + LG+ + + +FAK+V+S+ G+ + GG
Sbjct: 19 KKRSGGVTYVEGMNAYSGLKGLNKVNMLGVRKTADYSFAKVVASLSPAGRK--RRGGAFG 76
Query: 85 STCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
+ N A+EIFRIAA MNGLVL+GVAVGFVLLR+EA+VEESE
Sbjct: 77 AQMNDAAEIFRIAATMNGLVLVGVAVGFVLLRVEAAVEESE 117
>gi|168003976|ref|XP_001754688.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694309|gb|EDQ80658.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 112
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 34 ITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEI 93
+ L +F GL+ ++ +T +GMPVSTE+AFA I RA G GG L++ C+ ASEI
Sbjct: 25 VRKLKNFSGLQPESQVTRMGMPVSTEEAFANI----RARWSGRASRGGALSANCDVASEI 80
Query: 94 FRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
FRI IM+GL L+G+A+GFVLLR+EA+VEESE
Sbjct: 81 FRIVPIMSGLTLVGIAIGFVLLRVEAAVEESE 112
>gi|223975051|gb|ACN31713.1| unknown [Zea mays]
Length = 117
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Query: 31 VSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAA 90
V+Y+ G+N++ GLK N +T LG+ + + +FAK+V+S+ G+ + GG + NAA
Sbjct: 25 VTYVEGMNAYSGLKGLNKVTMLGVRKTADYSFAKVVASLSPAGRK--RRGGAFGAQMNAA 82
Query: 91 SEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
+EIFRIAA M+GLVL+GVAVGFVLLR+EA+VEE+E
Sbjct: 83 AEIFRIAATMSGLVLVGVAVGFVLLRVEAAVEEAE 117
>gi|226532914|ref|NP_001150160.1| plastoquinol-plastocyanin reductase [Zea mays]
gi|195637226|gb|ACG38081.1| plastoquinol-plastocyanin reductase [Zea mays]
Length = 117
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Query: 31 VSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAA 90
V+Y+ G+N++ GLK N +T LG+ + + +FAK+V+S+ G+ + GG + NAA
Sbjct: 25 VTYVEGMNAYSGLKGLNKVTMLGVRKTADYSFAKVVASLSPAGRK--RRGGAFGAQMNAA 82
Query: 91 SEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
+EIFRIAA M+GLVL+GVAVGFVLLR+EA VEE+E
Sbjct: 83 AEIFRIAATMSGLVLVGVAVGFVLLRVEAXVEEAE 117
>gi|357114266|ref|XP_003558921.1| PREDICTED: uncharacterized protein LOC100835051 [Brachypodium
distachyon]
Length = 116
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 6 ATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKI 65
A+LS AT TA A + +R V+Y+ G+N++ GLK N +T LG+ S + FA+I
Sbjct: 2 ASLSVATLPQLTAPAAAKKRS---GVTYVEGMNAYSGLKGLNKVTMLGVRKSADYKFARI 58
Query: 66 VSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLR 116
V+S+ GK + GG + CNAA EIFRIA +MN L L+GVAVGFVLLR
Sbjct: 59 VASLSPAGK---RRGGTFGAQCNAAGEIFRIAVVMNLLTLVGVAVGFVLLR 106
>gi|118489926|gb|ABK96760.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 69
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MAT SAT SP T + A+A S +R+ V+YITGLNSFGGLKA NS++SLG+ V TEQ
Sbjct: 1 MATTSATFSPPTLV---ASAVSSPKRKQTNVNYITGLNSFGGLKAHNSVSSLGLSVGTEQ 57
Query: 61 AFAKIVSSVRAP 72
+FAKIVSS+RAP
Sbjct: 58 SFAKIVSSLRAP 69
>gi|224063567|ref|XP_002301208.1| predicted protein [Populus trichocarpa]
gi|222842934|gb|EEE80481.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%)
Query: 26 RRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGKGEGQSGGVLTS 85
RR+ KV I G N +GGLKA NS+ +L +PVSTEQ FAK+V S+RA G+ GG L+S
Sbjct: 26 RRTNKVVDIVGTNPYGGLKASNSVLALSIPVSTEQCFAKVVGSLRAASNTHGRVGGALSS 85
Query: 86 TCNAASEIFRIAAIMN 101
C+ EIFRIAAIMN
Sbjct: 86 KCSDVGEIFRIAAIMN 101
>gi|326487280|dbj|BAJ89624.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508160|dbj|BAJ99347.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508228|dbj|BAJ99381.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 119
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 6 ATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKI 65
A+LS AT AA + ++ V+Y+ G+N++ GLK N +T LG+ S + FA++
Sbjct: 2 ASLSVATLPQLAAAPAAAAGKKRSGVTYVEGMNAYSGLKGLNKVTMLGVRKSADYKFARV 61
Query: 66 VSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLR 116
V+S+ GK + GG + CNAA EIF+IA +MN L L+GVAVGFVLLR
Sbjct: 62 VASLSPAGK---RRGGTFGAQCNAAGEIFQIAVVMNALTLVGVAVGFVLLR 109
>gi|297741373|emb|CBI32504.3| unnamed protein product [Vitis vinifera]
Length = 1085
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 1 MATASATLSPATF-ISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTE 59
MATASATLSP+TF +A A G +RR V +I GLNSF GLKA NS+ SLG+PV TE
Sbjct: 1008 MATASATLSPSTFSAAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNSVASLGLPVCTE 1067
Query: 60 QAFAKIVSSVRAPG 73
Q+FAKIV S++ G
Sbjct: 1068 QSFAKIVGSLKYSG 1081
>gi|356506858|ref|XP_003522192.1| PREDICTED: uncharacterized protein LOC100796896 [Glycine max]
Length = 466
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/91 (64%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 36 GLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAP-GKGEGQSGGVLTSTCNAASEIF 94
G+ SFGGLKA N + SLG P+STE+ FAK+VSSV+ G+G+SGG L+STCNA S+IF
Sbjct: 374 GVLSFGGLKASNGVVSLGFPMSTEKCFAKVVSSVKTTTSNGKGKSGGALSSTCNAVSKIF 433
Query: 95 RIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
IA I+NGLVL+GV VGFVLLR+EA V+E E
Sbjct: 434 MIATIINGLVLVGVVVGFVLLRVEAWVKEFE 464
>gi|116779836|gb|ABK21445.1| unknown [Picea sitchensis]
gi|224285770|gb|ACN40600.1| unknown [Picea sitchensis]
Length = 129
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 30 KVSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRA-PGKGEGQSGGVLTSTCN 88
KV + GL S+ GLK +N + +LG+ V +++ FA++V+ RA G GG L STCN
Sbjct: 32 KVCCVRGLKSYAGLKPENKVMNLGVAVHSDKQFARLVTMCRALKANSGGGRGGALASTCN 91
Query: 89 AASEIFRIAAIMNGLVLIGVAVGFVLLR 116
ASEI I IM+ LVLIGVAVGFVLLR
Sbjct: 92 VASEIATIVPIMSALVLIGVAVGFVLLR 119
>gi|145329957|ref|NP_001077964.1| putative cytochrome b6f complex subunit [Arabidopsis thaliana]
gi|330252753|gb|AEC07847.1| putative cytochrome b6f complex subunit [Arabidopsis thaliana]
Length = 93
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 46/131 (35%)
Query: 1 MATASATLSPATFISAT-----AAAGSCRRRRSVKVSYITGLNSFGGLKAQNS-LTSLGM 54
MATA+A PA IS T + +G +++ +KVSYITGLNS+GGLKAQN+ + S+G
Sbjct: 1 MATAAA---PAV-ISWTRSGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGS 56
Query: 55 PVSTEQAFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVL 114
P+ TEQ FA +V S++ G VGFVL
Sbjct: 57 PLCTEQCFANVVMSLK------------------------------------GRRVGFVL 80
Query: 115 LRIEASVEESE 125
LRIE SVEE+E
Sbjct: 81 LRIETSVEEAE 91
>gi|302759412|ref|XP_002963129.1| hypothetical protein SELMODRAFT_438339 [Selaginella moellendorffii]
gi|300169990|gb|EFJ36592.1| hypothetical protein SELMODRAFT_438339 [Selaginella moellendorffii]
Length = 116
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MAT SA+ A+ I + ++GS ++ I ++SFGGLKA NS+ LG +Q
Sbjct: 1 MATMSASFVAASTIPISRSSGSSKQ--------IHRMSSFGGLKAINSVMGLGCSQCVDQ 52
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
FA++ RA K + GG L + + + E+FR+ IM LVL+GVAVGFVLLR+E +
Sbjct: 53 QFAQL--QARAL-KSSSRRGGALAAKASVSEEVFRVVPIMTVLVLVGVAVGFVLLRVEQA 109
Query: 121 VEESE 125
VEESE
Sbjct: 110 VEESE 114
>gi|302796860|ref|XP_002980191.1| hypothetical protein SELMODRAFT_444444 [Selaginella moellendorffii]
gi|300151807|gb|EFJ18451.1| hypothetical protein SELMODRAFT_444444 [Selaginella moellendorffii]
Length = 116
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
Query: 1 MATASATLSPATFISATAAAGSCRRRRSVKVSYITGLNSFGGLKAQNSLTSLGMPVSTEQ 60
MAT SA+ A+ I + ++GS ++ I ++SFGGLKA N++ LG +Q
Sbjct: 1 MATMSASFVAASTIPISRSSGSSKQ--------IHRMSSFGGLKAINTVMGLGCSQCVDQ 52
Query: 61 AFAKIVSSVRAPGKGEGQSGGVLTSTCNAASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
FA++ RA K + GG L + + + E+FR+ IM LVL+GVAVGFVLLR+E +
Sbjct: 53 QFAQL--QARAL-KSSSRRGGALAAKASVSEEVFRVVPIMTVLVLVGVAVGFVLLRVEQA 109
Query: 121 VEESE 125
VEE+E
Sbjct: 110 VEEAE 114
>gi|51316199|sp|P80883.1|PETM_SPIOL RecName: Full=Cytochrome b6-f complex subunit 7; AltName:
Full=Cytochrome b6-f complex subunit PetM; AltName:
Full=Cytochrome b6-f complex subunit VII
Length = 36
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 35/36 (97%)
Query: 88 NAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEE 123
NAA+EIFRIAA+MNGL L+GVA+GFVLLRIEA+VEE
Sbjct: 1 NAAAEIFRIAAVMNGLTLVGVAIGFVLLRIEATVEE 36
>gi|412988579|emb|CCO17915.1| PetM subunit of cytochrome b6f complex [Bathycoccus prasinos]
Length = 160
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 88 NAASEIFRIAAIMNGLVLIGVAVGFVLLRIEASVE 122
+AA+EI +A + G LIG+A+GFVLLR+E++VE
Sbjct: 123 DAAAEIGDVATTLFGCTLIGLALGFVLLRVESTVE 157
>gi|223972743|gb|ACN30559.1| unknown [Zea mays]
Length = 279
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 31 VSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGK 74
V+Y+ G+ ++ GLK N +T LG+ + + +FAK+V+S+ G+
Sbjct: 25 VTYVEGMKAYSGLKGLNKVTMLGVRKTADYSFAKVVASLSLAGR 68
>gi|6440849|dbj|BAA78590.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 97
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 100 MNGLVLIGVAVGFVLLRIEASVEE 123
M G+ L+G+AVGFVLLR+EA+VEE
Sbjct: 74 MIGITLLGLAVGFVLLRVEAAVEE 97
>gi|159471904|ref|XP_001694096.1| cytochrome b6f complex PetM subunit [Chlamydomonas reinhardtii]
gi|2493687|sp|Q42496.1|PETM_CHLRE RecName: Full=Cytochrome b6-f complex subunit 7, chloroplastic;
AltName: Full=Cytochrome b6-f complex 4 kDa subunit;
AltName: Full=Cytochrome b6-f complex subunit PetM;
AltName: Full=Cytochrome b6-f complex subunit VII;
Flags: Precursor
gi|1039440|gb|AAC49525.1| cytochrome b6f 4.6 kDa subunit PetM [Chlamydomonas reinhardtii]
gi|1050459|emb|CAA63221.1| 4-kDa cytochrome b6/f subunit [Chlamydomonas reinhardtii]
gi|74272641|gb|ABA01116.1| chloroplast cytochrome b6f 4.6 kDa subunit [Chlamydomonas incerta]
gi|158277263|gb|EDP03032.1| cytochrome b6f complex PetM subunit [Chlamydomonas reinhardtii]
gi|1589393|prf||2211245A cytochrome b6f:SUBUNIT=4kD
Length = 99
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 68 SVRAPGKGEGQSGGVLTSTCNA-------ASEIFRIAAIMNGLVLIGVAVGFVLLRIEAS 120
S+R G+ S GV T N A I A M G+ L+G+A+GFVLLR+E+
Sbjct: 34 SLRTAGQKAAPSRGVATKAVNELAMIAGEAEFIAGTALTMVGMTLVGLAIGFVLLRVESL 93
Query: 121 VEESE 125
VEE +
Sbjct: 94 VEEGK 98
>gi|440136392|gb|AGB85044.1| chloroplast PetM subunit of cytochrome b6f complex, partial
[Auxenochlorella protothecoides]
Length = 154
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 96 IAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
+A++M G+ L+G+AVGFV+LR EA EE +
Sbjct: 90 VASVMFGITLLGLAVGFVILRFEALTEEGK 119
>gi|307110515|gb|EFN58751.1| hypothetical protein CHLNCDRAFT_15398, partial [Chlorella
variabilis]
Length = 59
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 93 IFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
IF ++ +M G+ LIG+A GFVLLR+E+ EE +
Sbjct: 26 IFGVSGVMVGITLIGLAFGFVLLRVESLAEEGK 58
>gi|302844369|ref|XP_002953725.1| hypothetical protein VOLCADRAFT_109895 [Volvox carteri f.
nagariensis]
gi|300261134|gb|EFJ45349.1| hypothetical protein VOLCADRAFT_109895 [Volvox carteri f.
nagariensis]
Length = 99
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 100 MNGLVLIGVAVGFVLLRIEASVEESE 125
M G+ L+G+A+GFVLLR+E+ VEE +
Sbjct: 73 MVGITLVGLAIGFVLLRVESLVEEGK 98
>gi|255085384|ref|XP_002505123.1| cytochrome b6/f complex subunit PetM [Micromonas sp. RCC299]
gi|226520392|gb|ACO66381.1| cytochrome b6/f complex subunit PetM [Micromonas sp. RCC299]
Length = 66
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 92 EIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
EI +A + L+G+AVGFVLLR+EA+VE E
Sbjct: 33 EIAEVAITCFSITLVGLAVGFVLLRVEAAVEGEE 66
>gi|226492791|ref|NP_001143679.1| uncharacterized protein LOC100276402 [Zea mays]
gi|195624324|gb|ACG33992.1| hypothetical protein [Zea mays]
Length = 279
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 31 VSYITGLNSFGGLKAQNSLTSLGMPVSTEQAFAKIVSSVRAPGK 74
V+Y+ + ++ GLK N +T LG+ + + +FAK+V+S+ G+
Sbjct: 25 VTYVECMKAYSGLKGLNKVTMLGVRKTADYSFAKVVASLSLAGR 68
>gi|303282385|ref|XP_003060484.1| cytochrome b6/f complex subunit PetM [Micromonas pusilla CCMP1545]
gi|226457955|gb|EEH55253.1| cytochrome b6/f complex subunit PetM [Micromonas pusilla CCMP1545]
Length = 108
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 74 KGEGQSGGVLTSTCNAA--SEIFRIAAIMNGLVLIGVAVGFVLLRIEASVEESE 125
+GE Q+ L AA EI +A + L+G+A+GFVLLR+EA+V E
Sbjct: 55 RGEAQATNALPLAEIAAVGPEIAEVATTCFAITLVGLAIGFVLLRVEAAVAGEE 108
>gi|384253183|gb|EIE26658.1| hypothetical protein COCSUDRAFT_64596 [Coccomyxa subellipsoidea
C-169]
Length = 117
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 10/45 (22%)
Query: 89 AASEIFRIAAIMN----------GLVLIGVAVGFVLLRIEASVEE 123
AA EI+++A ++ + L+G+AVGFVLLR+EA EE
Sbjct: 70 AAMEIYQVADELSYISGVAGVCFAITLVGLAVGFVLLRVEALTEE 114
>gi|40889435|pdb|1Q90|M Chain M, Structure Of The Cytochrome B6f (Plastohydroquinone :
Plastocyanin Oxidoreductase) From Chlamydomonas
Reinhardtii
Length = 39
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 97 AAIMNGLVLIGVAVGFVLLRIEASVEE 123
A M G+ L+G+A+GFVLLR+E+ VEE
Sbjct: 10 ALTMVGMTLVGLAIGFVLLRVESLVEE 36
>gi|268611579|ref|ZP_06145306.1| iron-containing alcohol dehydrogenase [Ruminococcus flavefaciens
FD-1]
Length = 393
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 37 LNSFGGLKAQNS-LTSLGMPVSTEQAFAK---IVSSVRAPGKGEGQSGGVLTSTCNAASE 92
L + G++ S L+ +GMP++ E+ A+ I V G G G++GG + + N E
Sbjct: 324 LTALEGIQCFRSFLSYIGMPINFEELGAREEDIPKLVEKMGIGNGRTGGFVQLSSNDIIE 383
Query: 93 IFRIAA 98
I+RIAA
Sbjct: 384 IYRIAA 389
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.127 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,536,475,385
Number of Sequences: 23463169
Number of extensions: 51667720
Number of successful extensions: 179579
Number of sequences better than 100.0: 76
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 179475
Number of HSP's gapped (non-prelim): 78
length of query: 125
length of database: 8,064,228,071
effective HSP length: 91
effective length of query: 34
effective length of database: 5,929,079,692
effective search space: 201588709528
effective search space used: 201588709528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)