Query 033216
Match_columns 125
No_of_seqs 39 out of 41
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 18:34:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033216.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033216hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fuea1 c.108.1.10 (A:13-256) 31.7 6.2 0.00045 25.3 0.6 21 63-83 174-194 (244)
2 d2rbka1 c.108.1.10 (A:2-261) S 30.6 13 0.00094 25.1 2.3 24 63-86 175-198 (260)
3 d1u02a_ c.108.1.15 (A:) Trehal 20.7 22 0.0016 22.5 1.8 21 63-83 148-168 (229)
4 d1rkqa_ c.108.1.10 (A:) Hypoth 20.3 19 0.0014 23.9 1.5 23 64-86 187-209 (271)
5 d1rlma_ c.108.1.10 (A:) Sugar 18.2 26 0.0019 23.3 1.8 23 64-86 180-202 (269)
6 d1nrwa_ c.108.1.10 (A:) Hypoth 17.3 25 0.0018 23.5 1.5 24 63-86 202-225 (285)
7 d1nf2a_ c.108.1.10 (A:) Hypoth 12.8 43 0.0031 22.4 1.8 25 63-87 179-203 (267)
8 d2i9ca1 a.118.1.25 (A:3-123) H 10.4 28 0.002 23.5 0.1 10 54-63 112-121 (121)
9 d1wioa2 b.1.1.1 (A:179-291) CD 10.2 41 0.003 22.7 0.9 26 45-70 27-53 (113)
10 d1wr8a_ c.108.1.10 (A:) Phosph 10.1 66 0.0048 20.1 1.9 24 64-87 142-165 (230)
No 1
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.74 E-value=6.2 Score=25.26 Aligned_cols=21 Identities=19% Similarity=-0.004 Sum_probs=18.7
Q ss_pred CccccccCCCcCHHHHHHHHH
Q 033216 63 EPCIDRIADTVGKYEALGWLL 83 (125)
Q Consensus 63 Ep~iD~~~~~Isk~eAl~~l~ 83 (125)
+.++|..+.++||..|+.+|+
T Consensus 174 ~~~lei~~~~vsKg~al~~L~ 194 (244)
T d2fuea1 174 MISFDVFPEGWDKRYCLDSLD 194 (244)
T ss_dssp SSCEEEEETTCSTTHHHHHHT
T ss_pred CccceecchhccHHHHHHHHh
Confidence 457899999999999999986
No 2
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=30.55 E-value=13 Score=25.13 Aligned_cols=24 Identities=13% Similarity=0.073 Sum_probs=20.3
Q ss_pred CccccccCCCcCHHHHHHHHHHHH
Q 033216 63 EPCIDRIADTVGKYEALGWLLGGL 86 (125)
Q Consensus 63 Ep~iD~~~~~Isk~eAl~~l~~gl 86 (125)
..++|+.+..++|.+|+.||+-=+
T Consensus 175 ~~~~ei~p~~~sK~~al~~l~~~~ 198 (260)
T d2rbka1 175 PAFADVTAKGDTKQKGIDEIIRHF 198 (260)
T ss_dssp TTCCEEESTTCSHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCHHHHHHHHHHhc
Confidence 357899999999999999998644
No 3
>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.69 E-value=22 Score=22.52 Aligned_cols=21 Identities=19% Similarity=0.031 Sum_probs=18.5
Q ss_pred CccccccCCCcCHHHHHHHHH
Q 033216 63 EPCIDRIADTVGKYEALGWLL 83 (125)
Q Consensus 63 Ep~iD~~~~~Isk~eAl~~l~ 83 (125)
..++|+.+..++|..|+.+|+
T Consensus 148 ~~~idi~p~g~~Kg~al~~l~ 168 (229)
T d1u02a_ 148 KMIIELRVPGVNKGSAIRSVR 168 (229)
T ss_dssp SSEEEEECTTCCHHHHHHHHH
T ss_pred ceEEEEecCCCCHHHHHHHHh
Confidence 457899999999999999986
No 4
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}
Probab=20.28 E-value=19 Score=23.93 Aligned_cols=23 Identities=17% Similarity=0.095 Sum_probs=20.0
Q ss_pred ccccccCCCcCHHHHHHHHHHHH
Q 033216 64 PCIDRIADTVGKYEALGWLLGGL 86 (125)
Q Consensus 64 p~iD~~~~~Isk~eAl~~l~~gl 86 (125)
.++|+.+..++|.+|+.++|=-+
T Consensus 187 ~~~~i~p~~~~K~~al~~l~~~~ 209 (271)
T d1rkqa_ 187 YFLEILDKRVNKGTGVKSLADVL 209 (271)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHH
T ss_pred ceEEecCCCCCcccccceehhhc
Confidence 47888989999999999998755
No 5
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=18.17 E-value=26 Score=23.29 Aligned_cols=23 Identities=26% Similarity=0.221 Sum_probs=19.7
Q ss_pred ccccccCCCcCHHHHHHHHHHHH
Q 033216 64 PCIDRIADTVGKYEALGWLLGGL 86 (125)
Q Consensus 64 p~iD~~~~~Isk~eAl~~l~~gl 86 (125)
.++|+.+.+++|..|+.+|+==+
T Consensus 180 ~~~di~p~~~sK~~al~~l~~~l 202 (269)
T d1rlma_ 180 GFIDLIIPGLHKANGISRLLKRW 202 (269)
T ss_dssp TEEEEECTTCSHHHHHHHHHHHH
T ss_pred ceEEEecCchHHHHHHHHHhhhh
Confidence 46899999999999999997654
No 6
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=17.28 E-value=25 Score=23.46 Aligned_cols=24 Identities=25% Similarity=0.156 Sum_probs=20.0
Q ss_pred CccccccCCCcCHHHHHHHHHHHH
Q 033216 63 EPCIDRIADTVGKYEALGWLLGGL 86 (125)
Q Consensus 63 Ep~iD~~~~~Isk~eAl~~l~~gl 86 (125)
...+|+.+.+++|..|+.|++=-+
T Consensus 202 ~~~ldi~~~~~~K~~ai~~l~~~~ 225 (285)
T d1nrwa_ 202 EHNFELSSRKASKGQALKRLAKQL 225 (285)
T ss_dssp TTEEEEEETTCSHHHHHHHHHHHT
T ss_pred CcEEEEecccchhhhHHHHHHhhc
Confidence 357889999999999999997544
No 7
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}
Probab=12.81 E-value=43 Score=22.38 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=20.9
Q ss_pred CccccccCCCcCHHHHHHHHHHHHH
Q 033216 63 EPCIDRIADTVGKYEALGWLLGGLG 87 (125)
Q Consensus 63 Ep~iD~~~~~Isk~eAl~~l~~gl~ 87 (125)
.-++|+.+..++|..|+.+++--++
T Consensus 179 ~~~~di~~~~~~K~~ai~~l~~~~~ 203 (267)
T d1nf2a_ 179 PTYLEIVPKNVDKGKALRFLRERMN 203 (267)
T ss_dssp TTEEEEECTTCCHHHHHHHHHHHHT
T ss_pred cceeeecCCCCchhHHHHHHHHhhc
Confidence 4578899899999999999986554
No 8
>d2i9ca1 a.118.1.25 (A:3-123) Hypothetical protein RPA1889 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=10.35 E-value=28 Score=23.46 Aligned_cols=10 Identities=40% Similarity=0.627 Sum_probs=7.4
Q ss_pred cccCCCCCCC
Q 033216 54 VWDNGTPFPE 63 (125)
Q Consensus 54 ~Wd~G~a~PE 63 (125)
.||+|++.||
T Consensus 112 ~~d~G~~~p~ 121 (121)
T d2i9ca1 112 LLDDGTFKPK 121 (121)
T ss_dssp HHHHSSCCCC
T ss_pred HHHcCCCCCC
Confidence 3888888774
No 9
>d1wioa2 b.1.1.1 (A:179-291) CD4 V-set domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.23 E-value=41 Score=22.65 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=20.3
Q ss_pred CCCCCCcccccc-CCCCCCCccccccC
Q 033216 45 KPLSVNDELVWD-NGTPFPEPCIDRIA 70 (125)
Q Consensus 45 kpLpe~~EL~Wd-~G~a~PEp~iD~~~ 70 (125)
+.|--+-||+|. .|...+++.|-|+-
T Consensus 27 e~L~~~GEL~Wqaega~S~~switFsl 53 (113)
T d1wioa2 27 EKLTGSGELWWQAERASSSKSWITFDL 53 (113)
T ss_dssp CSSCEEEEEEEEESSCCCCCCEEEEEE
T ss_pred hhcCCCceEEEEccCCCCcceEEEEEe
Confidence 344457899998 89999998888765
No 10
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}
Probab=10.10 E-value=66 Score=20.12 Aligned_cols=24 Identities=17% Similarity=-0.058 Sum_probs=19.9
Q ss_pred ccccccCCCcCHHHHHHHHHHHHH
Q 033216 64 PCIDRIADTVGKYEALGWLLGGLG 87 (125)
Q Consensus 64 p~iD~~~~~Isk~eAl~~l~~gl~ 87 (125)
.++|..+.+++|.+|+.+++--++
T Consensus 142 ~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 142 FAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHT
T ss_pred cEEEEeeCCcCcchhhcccccccc
Confidence 467888889999999999987653
Done!