Query 033221
Match_columns 125
No_of_seqs 216 out of 1051
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 18:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033221.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033221hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3y_A Epididymal secretory gl 99.9 2.9E-26 9.8E-31 161.9 14.4 123 2-125 71-213 (215)
2 2r37_A Glutathione peroxidase 99.9 2.1E-25 7.1E-30 156.6 13.7 121 4-124 54-194 (207)
3 2f8a_A Glutathione peroxidase 99.9 7.5E-24 2.6E-28 148.5 13.9 123 2-124 62-208 (208)
4 3dwv_A Glutathione peroxidase- 99.9 4.8E-23 1.6E-27 141.7 10.3 121 3-125 62-185 (187)
5 2v1m_A Glutathione peroxidase; 99.9 2.4E-22 8.1E-27 134.8 13.4 122 3-125 47-169 (169)
6 2gs3_A PHGPX, GPX-4, phospholi 99.9 1.9E-22 6.4E-27 138.4 12.6 119 3-122 65-185 (185)
7 2p5q_A Glutathione peroxidase 99.9 2.1E-22 7.2E-27 135.1 12.4 123 3-125 48-170 (170)
8 2obi_A PHGPX, GPX-4, phospholi 99.9 6.4E-22 2.2E-26 135.3 12.5 119 3-122 63-183 (183)
9 3kij_A Probable glutathione pe 99.9 8.6E-21 2.9E-25 129.4 11.9 116 3-123 54-170 (180)
10 2vup_A Glutathione peroxidase- 99.8 2.3E-20 7.8E-25 128.4 13.5 121 3-124 64-186 (190)
11 3cmi_A Peroxiredoxin HYR1; thi 99.8 9.4E-21 3.2E-25 128.1 10.8 115 5-125 49-170 (171)
12 2p31_A CL683, glutathione pero 99.8 3.6E-20 1.2E-24 126.6 12.0 109 3-123 65-181 (181)
13 3lor_A Thiol-disulfide isomera 99.8 1.8E-19 6.1E-24 119.7 12.1 108 3-124 46-156 (160)
14 3eyt_A Uncharacterized protein 99.8 2E-19 6.9E-24 119.3 11.4 108 3-124 44-153 (158)
15 3raz_A Thioredoxin-related pro 99.8 1.9E-17 6.7E-22 109.3 12.0 102 3-124 40-141 (151)
16 3lwa_A Secreted thiol-disulfid 99.8 2.6E-17 8.8E-22 111.9 12.9 102 3-125 75-183 (183)
17 3u5r_E Uncharacterized protein 99.7 1.2E-17 4.2E-22 117.2 10.0 105 3-124 75-188 (218)
18 2ywi_A Hypothetical conserved 99.7 1.2E-17 4E-22 114.5 9.2 105 3-124 62-175 (196)
19 3fw2_A Thiol-disulfide oxidore 99.7 5.9E-17 2E-21 106.8 10.4 98 3-124 51-149 (150)
20 1n8j_A AHPC, alkyl hydroperoxi 99.7 7E-17 2.4E-21 110.9 10.6 95 3-122 47-155 (186)
21 2f9s_A Thiol-disulfide oxidore 99.7 9.6E-17 3.3E-21 105.7 10.5 98 3-124 42-139 (151)
22 1xzo_A BSSCO, hypothetical pro 99.7 7.7E-17 2.6E-21 108.3 9.4 112 3-124 50-173 (174)
23 2b5x_A YKUV protein, TRXY; thi 99.7 3.3E-16 1.1E-20 102.0 12.2 103 3-125 45-147 (148)
24 3drn_A Peroxiredoxin, bacterio 99.7 1.1E-16 3.8E-21 107.0 10.2 83 3-110 46-132 (161)
25 4g2e_A Peroxiredoxin; redox pr 99.7 2.3E-17 7.8E-22 110.5 6.6 105 3-121 47-156 (157)
26 2cvb_A Probable thiol-disulfid 99.7 8.1E-17 2.8E-21 109.9 9.5 104 3-124 49-160 (188)
27 3gkn_A Bacterioferritin comigr 99.7 1.3E-16 4.6E-21 106.4 10.3 96 3-123 52-162 (163)
28 2h30_A Thioredoxin, peptide me 99.7 2E-16 6.7E-21 105.3 10.0 103 3-124 54-157 (164)
29 2l5o_A Putative thioredoxin; s 99.7 2.4E-16 8.3E-21 103.7 10.2 99 3-124 44-142 (153)
30 3ixr_A Bacterioferritin comigr 99.7 3E-16 1E-20 107.0 10.8 106 3-122 68-177 (179)
31 4gqc_A Thiol peroxidase, perox 99.7 1.2E-17 4.2E-22 112.8 3.8 99 3-124 50-161 (164)
32 2hyx_A Protein DIPZ; thioredox 99.7 1.4E-16 4.7E-21 119.6 9.4 103 3-124 98-200 (352)
33 2ggt_A SCO1 protein homolog, m 99.7 3.4E-16 1.2E-20 104.1 10.0 104 3-124 40-162 (164)
34 3ewl_A Uncharacterized conserv 99.7 5.1E-16 1.7E-20 101.1 9.6 96 3-123 43-141 (142)
35 2pn8_A Peroxiredoxin-4; thiore 99.7 5.7E-16 2E-20 108.5 10.4 95 3-122 65-176 (211)
36 1jfu_A Thiol:disulfide interch 99.7 4.8E-16 1.6E-20 105.8 9.7 103 3-124 76-181 (186)
37 2c0d_A Thioredoxin peroxidase 99.7 5.6E-16 1.9E-20 109.4 10.2 95 3-122 73-183 (221)
38 3gl3_A Putative thiol:disulfid 99.7 1.5E-15 5.1E-20 99.8 11.4 98 3-124 44-143 (152)
39 3erw_A Sporulation thiol-disul 99.7 7.3E-16 2.5E-20 100.1 9.6 95 3-118 50-144 (145)
40 3or5_A Thiol:disulfide interch 99.7 9.2E-16 3.1E-20 101.9 10.2 103 3-124 50-152 (165)
41 2i81_A 2-Cys peroxiredoxin; st 99.7 7.3E-16 2.5E-20 108.1 10.0 95 3-122 69-179 (213)
42 3kcm_A Thioredoxin family prot 99.6 8.9E-16 3.1E-20 101.1 9.2 99 3-124 44-144 (154)
43 2rli_A SCO2 protein homolog, m 99.6 1.3E-15 4.3E-20 102.1 10.0 104 3-124 43-165 (171)
44 1we0_A Alkyl hydroperoxide red 99.6 1.8E-15 6.1E-20 103.4 10.3 96 3-123 48-157 (187)
45 4fo5_A Thioredoxin-like protei 99.6 1.8E-15 6.2E-20 98.9 9.8 94 3-120 48-142 (143)
46 1uul_A Tryparedoxin peroxidase 99.6 1.4E-15 4.7E-20 105.4 9.7 95 3-122 53-164 (202)
47 1zof_A Alkyl hydroperoxide-red 99.6 8.4E-16 2.9E-20 106.0 8.5 95 3-122 50-160 (198)
48 2bmx_A Alkyl hydroperoxidase C 99.6 1.8E-15 6.1E-20 104.2 10.0 96 3-123 62-170 (195)
49 3hcz_A Possible thiol-disulfid 99.6 1.1E-15 3.7E-20 99.7 8.5 97 3-123 47-146 (148)
50 2lrn_A Thiol:disulfide interch 99.6 1.7E-15 5.8E-20 100.0 9.3 98 3-124 45-142 (152)
51 3ia1_A THIO-disulfide isomeras 99.6 1.4E-15 5E-20 100.2 8.9 101 3-125 46-146 (154)
52 1lu4_A Soluble secreted antige 99.6 2.8E-15 9.7E-20 96.4 9.9 94 3-123 40-136 (136)
53 1zye_A Thioredoxin-dependent p 99.6 2.5E-15 8.5E-20 105.8 10.4 95 3-122 73-184 (220)
54 3fkf_A Thiol-disulfide oxidore 99.6 4E-15 1.4E-19 96.9 10.5 98 3-124 49-147 (148)
55 2h01_A 2-Cys peroxiredoxin; th 99.6 2E-15 6.9E-20 103.6 9.3 95 3-122 48-158 (192)
56 3ztl_A Thioredoxin peroxidase; 99.6 1.2E-15 4.2E-20 107.4 8.4 84 3-111 86-182 (222)
57 2a4v_A Peroxiredoxin DOT5; yea 99.6 1.8E-15 6.2E-20 100.8 8.8 83 3-112 52-140 (159)
58 3qpm_A Peroxiredoxin; oxidored 99.6 1.5E-15 5.1E-20 108.4 8.8 94 3-121 94-204 (240)
59 1prx_A HORF6; peroxiredoxin, h 99.6 5.8E-15 2E-19 104.4 11.8 107 3-122 48-168 (224)
60 1xvw_A Hypothetical protein RV 99.6 3.4E-15 1.2E-19 99.2 9.3 94 3-121 53-158 (160)
61 2yzh_A Probable thiol peroxida 99.6 5.7E-15 1.9E-19 99.6 10.5 94 3-122 64-171 (171)
62 1zzo_A RV1677; thioredoxin fol 99.6 8.1E-15 2.8E-19 94.0 10.6 95 3-124 41-136 (136)
63 3eur_A Uncharacterized protein 99.6 9.6E-15 3.3E-19 95.3 11.0 92 3-119 47-141 (142)
64 1xcc_A 1-Cys peroxiredoxin; un 99.6 4.9E-15 1.7E-19 104.5 9.8 107 3-122 48-165 (220)
65 2v2g_A Peroxiredoxin 6; oxidor 99.6 6.1E-15 2.1E-19 105.0 10.3 98 3-122 46-164 (233)
66 3mng_A Peroxiredoxin-5, mitoch 99.6 2.8E-15 9.7E-20 102.2 8.1 103 4-120 62-172 (173)
67 2k6v_A Putative cytochrome C o 99.6 4.2E-16 1.4E-20 104.4 3.8 109 3-122 52-172 (172)
68 3kh7_A Thiol:disulfide interch 99.6 5.6E-15 1.9E-19 100.3 9.4 94 3-123 74-167 (176)
69 3tjj_A Peroxiredoxin-4; thiore 99.6 5.7E-15 2E-19 106.3 9.6 94 3-121 108-218 (254)
70 1qmv_A Human thioredoxin perox 99.6 1E-14 3.4E-19 100.6 10.4 95 3-122 51-162 (197)
71 3ha9_A Uncharacterized thiored 99.6 7.1E-15 2.4E-19 98.1 9.3 99 3-123 53-164 (165)
72 1tp9_A Peroxiredoxin, PRX D (t 99.6 3.3E-15 1.1E-19 100.3 7.4 81 4-108 54-146 (162)
73 2lja_A Putative thiol-disulfid 99.6 1.4E-14 4.9E-19 95.0 9.8 99 3-124 46-144 (152)
74 3a2v_A Probable peroxiredoxin; 99.6 1.1E-14 3.6E-19 104.7 9.8 103 3-122 50-161 (249)
75 3uma_A Hypothetical peroxiredo 99.6 5.4E-15 1.8E-19 101.8 7.9 92 5-120 76-183 (184)
76 1psq_A Probable thiol peroxida 99.6 8.4E-15 2.9E-19 98.1 8.6 91 3-120 59-162 (163)
77 4evm_A Thioredoxin family prot 99.6 4.6E-14 1.6E-18 90.2 11.5 99 3-121 38-137 (138)
78 2lrt_A Uncharacterized protein 99.6 2.4E-14 8.1E-19 94.9 9.5 88 3-113 51-138 (152)
79 3zrd_A Thiol peroxidase; oxido 99.6 7.4E-15 2.5E-19 102.0 7.3 92 3-121 95-199 (200)
80 2wfc_A Peroxiredoxin 5, PRDX5; 99.6 2.1E-14 7E-19 97.2 9.0 81 5-109 51-143 (167)
81 1q98_A Thiol peroxidase, TPX; 99.6 9.8E-15 3.3E-19 98.1 7.2 91 3-120 60-163 (165)
82 1xvq_A Thiol peroxidase; thior 99.5 1.2E-14 4E-19 98.6 7.6 95 3-125 61-167 (175)
83 3me7_A Putative uncharacterize 99.5 2E-14 6.8E-19 97.2 8.3 107 3-125 45-164 (170)
84 3p7x_A Probable thiol peroxida 99.5 1.3E-14 4.4E-19 97.4 7.3 78 3-108 63-148 (166)
85 1nm3_A Protein HI0572; hybrid, 99.5 2.7E-14 9.3E-19 101.3 9.2 92 4-110 52-145 (241)
86 2b1k_A Thiol:disulfide interch 99.5 2.1E-14 7.1E-19 96.0 7.4 94 3-123 67-160 (168)
87 2jsy_A Probable thiol peroxida 99.5 1.9E-14 6.5E-19 96.3 7.0 94 3-123 61-167 (167)
88 2pwj_A Mitochondrial peroxired 99.5 2.6E-14 8.9E-19 97.0 7.1 92 3-109 60-155 (171)
89 1kng_A Thiol:disulfide interch 99.5 5.3E-14 1.8E-18 92.6 7.9 95 3-124 58-153 (156)
90 2b7k_A SCO1 protein; metalloch 99.5 1E-13 3.6E-18 95.9 8.6 105 3-123 58-179 (200)
91 2ls5_A Uncharacterized protein 99.2 2.1E-15 7.3E-20 100.1 0.0 98 3-123 49-148 (159)
92 4eo3_A Bacterioferritin comigr 99.5 1.6E-13 5.6E-18 101.7 9.8 92 4-122 42-138 (322)
93 4f82_A Thioredoxin reductase; 99.5 1.9E-13 6.5E-18 93.6 8.5 102 4-120 66-173 (176)
94 4hde_A SCO1/SENC family lipopr 99.5 1.5E-12 5.3E-17 88.0 12.3 113 4-123 50-170 (170)
95 3sbc_A Peroxiredoxin TSA1; alp 99.5 4.1E-13 1.4E-17 94.6 9.2 100 3-121 69-179 (216)
96 3keb_A Probable thiol peroxida 99.4 7.8E-13 2.7E-17 93.6 9.3 91 4-122 71-175 (224)
97 3hdc_A Thioredoxin family prot 99.4 3.9E-13 1.3E-17 89.1 6.9 91 3-120 57-149 (158)
98 3tue_A Tryparedoxin peroxidase 99.4 2.8E-12 9.6E-17 90.5 9.9 101 3-121 73-183 (219)
99 2xhf_A Peroxiredoxin 5; oxidor 99.2 3.3E-11 1.1E-15 82.1 7.5 92 3-109 59-153 (171)
100 1xiy_A Peroxiredoxin, pfaop; a 99.2 5.9E-11 2E-15 81.5 8.8 90 4-108 62-154 (182)
101 1i5g_A Tryparedoxin II; electr 99.2 2.3E-11 7.9E-16 79.1 5.0 81 3-106 44-127 (144)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.1 3E-11 1E-15 78.8 3.8 82 3-107 44-128 (146)
103 3s9f_A Tryparedoxin; thioredox 99.1 4.2E-11 1.4E-15 80.3 4.6 81 3-106 64-147 (165)
104 2lus_A Thioredoxion; CR-Trp16, 98.7 8.8E-12 3E-16 80.7 0.0 82 3-106 42-126 (143)
105 1o73_A Tryparedoxin; electron 99.0 1.5E-10 5E-15 75.1 4.0 81 3-106 44-127 (144)
106 2ju5_A Thioredoxin disulfide i 98.8 8.4E-09 2.9E-13 68.2 5.4 40 85-125 113-154 (154)
107 2l57_A Uncharacterized protein 98.8 1E-07 3.5E-12 60.4 10.3 40 85-124 79-118 (126)
108 3hxs_A Thioredoxin, TRXP; elec 98.6 3.7E-07 1.3E-11 58.8 8.1 40 85-125 102-141 (141)
109 2fwh_A Thiol:disulfide interch 98.5 5.5E-07 1.9E-11 57.9 6.8 38 85-122 88-127 (134)
110 2es7_A Q8ZP25_salty, putative 98.4 6.6E-07 2.3E-11 58.7 7.2 39 85-124 88-126 (142)
111 2l5l_A Thioredoxin; structural 98.4 1.6E-06 5.6E-11 55.7 8.5 39 85-124 89-127 (136)
112 2voc_A Thioredoxin; electron t 98.4 2.4E-06 8.2E-11 53.0 8.8 39 85-124 68-106 (112)
113 3fk8_A Disulphide isomerase; A 98.3 1.4E-06 4.9E-11 55.5 6.5 36 87-122 90-132 (133)
114 1thx_A Thioredoxin, thioredoxi 98.3 4.2E-06 1.4E-10 51.5 8.3 39 85-124 76-114 (115)
115 2trx_A Thioredoxin; electron t 98.3 6.9E-06 2.4E-10 50.1 9.1 38 85-123 71-108 (108)
116 1nsw_A Thioredoxin, TRX; therm 98.3 2.5E-06 8.4E-11 51.9 6.8 38 85-123 68-105 (105)
117 2o8v_B Thioredoxin 1; disulfid 98.3 7.6E-06 2.6E-10 52.2 9.3 38 85-123 91-128 (128)
118 3tco_A Thioredoxin (TRXA-1); d 98.3 4.9E-06 1.7E-10 50.6 8.0 38 85-123 72-109 (109)
119 2ppt_A Thioredoxin-2; thiredox 98.3 8.8E-06 3E-10 53.7 9.5 39 85-124 115-153 (155)
120 1t00_A Thioredoxin, TRX; redox 98.3 5.2E-06 1.8E-10 51.1 7.9 39 85-124 74-112 (112)
121 2yzu_A Thioredoxin; redox prot 98.3 5.5E-06 1.9E-10 50.3 7.9 40 85-125 69-108 (109)
122 1w4v_A Thioredoxin, mitochondr 98.3 6.9E-06 2.4E-10 51.4 8.5 38 85-123 82-119 (119)
123 2e0q_A Thioredoxin; electron t 98.3 6.5E-06 2.2E-10 49.5 8.1 39 85-124 66-104 (104)
124 1dby_A Chloroplast thioredoxin 98.3 6.6E-06 2.3E-10 50.1 8.1 38 85-123 70-107 (107)
125 3qfa_C Thioredoxin; protein-pr 98.2 5.1E-06 1.8E-10 51.9 7.5 36 85-122 81-116 (116)
126 3emx_A Thioredoxin; structural 98.2 3.8E-06 1.3E-10 54.0 6.9 39 85-124 89-127 (135)
127 3p2a_A Thioredoxin 2, putative 98.2 9.1E-06 3.1E-10 52.7 8.6 39 85-124 106-144 (148)
128 3die_A Thioredoxin, TRX; elect 98.2 9E-06 3.1E-10 49.2 7.9 37 85-122 70-106 (106)
129 1x5e_A Thioredoxin domain cont 98.2 6.4E-06 2.2E-10 51.9 7.4 38 85-124 74-111 (126)
130 1v98_A Thioredoxin; oxidoreduc 98.2 1.2E-05 4.2E-10 51.6 8.7 40 85-125 101-140 (140)
131 2i4a_A Thioredoxin; acidophIle 98.2 2.4E-05 8.1E-10 47.4 9.5 37 85-122 71-107 (107)
132 3ul3_B Thioredoxin, thioredoxi 98.2 7.7E-06 2.6E-10 51.8 7.2 70 3-120 58-127 (128)
133 1ep7_A Thioredoxin CH1, H-type 98.2 1.3E-05 4.5E-10 49.1 8.0 37 85-123 75-111 (112)
134 3d22_A TRXH4, thioredoxin H-ty 98.1 1.3E-05 4.5E-10 51.3 7.8 38 85-124 96-133 (139)
135 3gnj_A Thioredoxin domain prot 98.1 1.8E-05 6.3E-10 48.3 8.1 38 85-123 73-110 (111)
136 3f3q_A Thioredoxin-1; His TAG, 98.1 1.6E-05 5.4E-10 49.0 7.6 36 85-122 74-109 (109)
137 1xfl_A Thioredoxin H1; AT3G510 98.1 1.9E-05 6.5E-10 49.9 8.0 37 85-123 88-124 (124)
138 2pu9_C TRX-F, thioredoxin F-ty 98.1 3.9E-05 1.3E-09 47.0 9.1 37 85-123 75-111 (111)
139 2qgv_A Hydrogenase-1 operon pr 98.1 1.7E-05 5.7E-10 52.1 7.5 38 85-123 88-125 (140)
140 3d6i_A Monothiol glutaredoxin- 98.1 2.3E-05 7.9E-10 48.1 7.9 37 85-123 73-109 (112)
141 3m9j_A Thioredoxin; oxidoreduc 98.1 2.6E-05 8.9E-10 47.1 7.7 36 85-122 70-105 (105)
142 1x5d_A Protein disulfide-isome 98.0 3.5E-05 1.2E-09 48.6 8.5 38 85-123 80-117 (133)
143 2j23_A Thioredoxin; immune pro 98.0 6.5E-06 2.2E-10 51.8 4.9 37 85-123 85-121 (121)
144 2vlu_A Thioredoxin, thioredoxi 98.0 2.9E-05 9.9E-10 48.4 7.9 38 85-124 84-121 (122)
145 2dj1_A Protein disulfide-isome 98.0 2.7E-05 9.2E-10 49.7 7.8 38 85-124 88-125 (140)
146 2kuc_A Putative disulphide-iso 98.0 9.9E-06 3.4E-10 51.1 5.6 40 85-124 83-122 (130)
147 4euy_A Uncharacterized protein 98.0 2.7E-05 9.1E-10 47.5 7.3 37 85-122 68-104 (105)
148 2wz9_A Glutaredoxin-3; protein 98.0 3.3E-05 1.1E-09 50.5 8.2 38 85-124 82-119 (153)
149 1fb6_A Thioredoxin M; electron 98.0 3.4E-05 1.2E-09 46.5 7.6 37 85-122 69-105 (105)
150 2dml_A Protein disulfide-isome 98.0 1.9E-05 6.6E-10 49.8 6.7 39 85-123 86-124 (130)
151 2qsi_A Putative hydrogenase ex 98.0 2.8E-05 9.5E-10 50.9 7.4 37 85-122 86-122 (137)
152 3hz4_A Thioredoxin; NYSGXRC, P 98.0 2.7E-05 9.2E-10 50.2 7.1 38 85-123 75-112 (140)
153 3apq_A DNAJ homolog subfamily 98.0 3.2E-05 1.1E-09 53.1 7.9 39 85-124 165-203 (210)
154 2vm1_A Thioredoxin, thioredoxi 98.0 5.1E-05 1.7E-09 46.7 8.0 38 85-124 78-115 (118)
155 1syr_A Thioredoxin; SGPP, stru 98.0 3.4E-05 1.2E-09 47.5 7.1 37 85-123 76-112 (112)
156 2l6c_A Thioredoxin; oxidoreduc 97.9 2E-05 6.7E-10 48.7 5.7 39 85-124 69-107 (110)
157 3gix_A Thioredoxin-like protei 97.9 2.7E-05 9.3E-10 51.0 6.6 37 85-122 74-120 (149)
158 1faa_A Thioredoxin F; electron 97.9 2.3E-05 8E-10 49.0 6.1 36 85-122 88-123 (124)
159 3f9u_A Putative exported cytoc 97.9 3.9E-06 1.3E-10 55.8 2.1 40 85-124 127-167 (172)
160 1xwb_A Thioredoxin; dimerizati 97.9 9.3E-05 3.2E-09 44.6 8.0 36 85-122 71-106 (106)
161 1r26_A Thioredoxin; redox-acti 97.9 6.8E-05 2.3E-09 47.5 7.7 38 85-124 87-124 (125)
162 2i1u_A Thioredoxin, TRX, MPT46 97.9 4E-05 1.4E-09 47.5 6.3 39 85-124 81-119 (121)
163 3dxb_A Thioredoxin N-terminall 97.9 0.00012 4.1E-09 50.7 9.2 39 85-124 81-119 (222)
164 3qou_A Protein YBBN; thioredox 97.9 6.7E-05 2.3E-09 53.6 8.0 38 85-123 77-114 (287)
165 2xc2_A Thioredoxinn; oxidoredu 97.8 6.6E-05 2.3E-09 46.5 6.8 36 85-122 82-117 (117)
166 1gh2_A Thioredoxin-like protei 97.8 9.3E-05 3.2E-09 45.0 7.3 37 85-123 71-107 (107)
167 2oe3_A Thioredoxin-3; electron 97.8 8.1E-05 2.8E-09 46.3 7.1 34 85-120 80-113 (114)
168 2lst_A Thioredoxin; structural 97.0 2.6E-06 8.8E-11 54.0 0.0 40 85-124 75-117 (130)
169 2vim_A Thioredoxin, TRX; thior 97.8 0.00013 4.5E-09 43.7 7.7 36 85-122 69-104 (104)
170 2dj0_A Thioredoxin-related tra 97.8 9.1E-06 3.1E-10 52.1 2.1 70 3-113 42-111 (137)
171 1zma_A Bacterocin transport ac 97.8 8.4E-05 2.9E-09 46.2 6.5 34 85-119 84-117 (118)
172 3zzx_A Thioredoxin; oxidoreduc 97.8 0.00018 6.1E-09 44.4 7.9 34 85-120 70-103 (105)
173 1ti3_A Thioredoxin H, PTTRXH1; 97.8 0.00036 1.2E-08 42.5 9.3 37 85-123 76-112 (113)
174 3uvt_A Thioredoxin domain-cont 97.7 0.00018 6.2E-09 43.6 7.5 36 85-121 75-110 (111)
175 3t58_A Sulfhydryl oxidase 1; o 97.7 0.00021 7.1E-09 56.0 9.0 78 3-124 46-128 (519)
176 1nho_A Probable thioredoxin; b 97.7 0.00022 7.6E-09 41.2 7.1 34 85-123 52-85 (85)
177 1z6n_A Hypothetical protein PA 97.7 3.7E-05 1.3E-09 51.6 3.8 23 86-109 108-130 (167)
178 1fo5_A Thioredoxin; disulfide 97.6 0.00039 1.3E-08 40.1 7.6 33 85-122 53-85 (85)
179 1oaz_A Thioredoxin 1; immune s 97.6 7.3E-05 2.5E-09 47.2 4.5 38 85-123 86-123 (123)
180 1qgv_A Spliceosomal protein U5 97.6 0.00056 1.9E-08 44.3 8.8 38 85-123 74-121 (142)
181 4h86_A Peroxiredoxin type-2; o 97.6 0.00025 8.6E-09 49.0 7.2 88 2-106 86-179 (199)
182 3aps_A DNAJ homolog subfamily 97.6 8.5E-05 2.9E-09 46.2 4.3 39 85-124 72-114 (122)
183 2f51_A Thioredoxin; electron t 97.6 0.00018 6.2E-09 44.9 5.8 37 85-122 73-112 (118)
184 1a8l_A Protein disulfide oxido 97.5 0.00044 1.5E-08 47.5 8.0 38 85-123 189-226 (226)
185 2dj3_A Protein disulfide-isome 97.5 0.00057 1.9E-08 43.0 7.4 40 85-124 78-119 (133)
186 3idv_A Protein disulfide-isome 97.5 0.00052 1.8E-08 47.4 7.6 37 85-123 86-122 (241)
187 3cxg_A Putative thioredoxin; m 97.4 0.00018 6.2E-09 45.9 4.1 39 85-124 89-130 (133)
188 3dml_A Putative uncharacterize 97.3 0.00024 8.4E-09 45.0 4.3 38 85-123 73-110 (116)
189 3q6o_A Sulfhydryl oxidase 1; p 97.3 0.001 3.5E-08 46.4 7.2 75 4-124 47-128 (244)
190 3h79_A Thioredoxin-like protei 97.2 0.0018 6.2E-08 40.5 7.5 37 85-121 89-126 (127)
191 1sen_A Thioredoxin-like protei 97.1 0.00019 6.4E-09 47.6 1.9 38 86-123 101-148 (164)
192 2dlx_A UBX domain-containing p 97.1 0.0015 5E-08 43.2 6.0 68 40-123 68-136 (153)
193 1sji_A Calsequestrin 2, calseq 97.0 0.0024 8.1E-08 47.0 7.2 37 85-123 86-122 (350)
194 3ph9_A Anterior gradient prote 96.9 0.00036 1.2E-08 46.1 2.2 39 85-123 97-145 (151)
195 1mek_A Protein disulfide isome 96.9 0.00062 2.1E-08 41.6 2.8 40 85-125 78-119 (120)
196 2djj_A PDI, protein disulfide- 96.9 0.00059 2E-08 42.1 2.6 39 86-124 79-118 (121)
197 3idv_A Protein disulfide-isome 96.7 0.008 2.7E-07 41.2 7.6 38 85-124 201-238 (241)
198 2r2j_A Thioredoxin domain-cont 96.6 0.012 4E-07 43.9 8.6 39 85-124 79-118 (382)
199 2hls_A Protein disulfide oxido 96.6 0.014 4.8E-07 40.9 8.6 35 85-124 193-227 (243)
200 3gyk_A 27KDA outer membrane pr 96.6 0.0019 6.5E-08 42.6 3.9 34 85-124 141-174 (175)
201 2av4_A Thioredoxin-like protei 96.6 0.0027 9.3E-08 42.4 4.5 38 85-123 92-139 (160)
202 2yj7_A LPBCA thioredoxin; oxid 95.6 0.00033 1.1E-08 41.9 0.0 37 85-122 70-106 (106)
203 2b5e_A Protein disulfide-isome 96.6 0.008 2.7E-07 46.2 7.8 38 85-123 83-122 (504)
204 3ed3_A Protein disulfide-isome 96.6 0.011 3.6E-07 42.9 7.9 39 85-123 88-142 (298)
205 2znm_A Thiol:disulfide interch 96.5 0.0049 1.7E-07 41.3 5.4 106 4-123 39-180 (195)
206 3apo_A DNAJ homolog subfamily 96.5 0.011 3.7E-07 47.9 8.2 72 3-123 471-542 (780)
207 3apo_A DNAJ homolog subfamily 96.4 0.0029 1E-07 51.2 4.4 39 85-124 726-768 (780)
208 3f8u_A Protein disulfide-isome 96.4 0.013 4.5E-07 44.7 7.6 38 85-123 72-109 (481)
209 3f8u_A Protein disulfide-isome 96.3 0.022 7.5E-07 43.4 8.6 39 85-123 422-461 (481)
210 2ywm_A Glutaredoxin-like prote 96.2 0.012 4E-07 40.4 5.8 35 85-123 186-220 (229)
211 1a0r_P Phosducin, MEKA, PP33; 95.8 0.027 9.2E-07 39.9 6.6 36 85-121 182-224 (245)
212 1wmj_A Thioredoxin H-type; str 95.8 0.0022 7.5E-08 39.9 0.6 38 85-124 86-123 (130)
213 2dbc_A PDCL2, unnamed protein 95.7 0.011 3.7E-07 37.5 3.8 36 85-121 77-119 (135)
214 3ira_A Conserved protein; meth 95.6 0.011 3.6E-07 39.9 3.6 21 85-105 101-121 (173)
215 3uem_A Protein disulfide-isome 95.5 0.042 1.4E-06 40.2 6.9 38 85-122 318-356 (361)
216 1ttz_A Conserved hypothetical 95.5 0.019 6.6E-07 34.1 4.1 63 40-123 15-77 (87)
217 2rem_A Disulfide oxidoreductas 95.5 0.023 7.8E-07 37.8 4.9 34 85-124 152-185 (193)
218 2e7p_A Glutaredoxin; thioredox 94.9 0.052 1.8E-06 33.0 5.0 100 2-121 2-106 (116)
219 1wou_A Thioredoxin -related pr 94.9 0.039 1.3E-06 34.2 4.4 33 85-119 89-121 (123)
220 1v58_A Thiol:disulfide interch 94.9 0.017 5.8E-07 40.5 2.9 38 85-123 196-233 (241)
221 3us3_A Calsequestrin-1; calciu 94.8 0.14 4.9E-06 37.8 8.0 37 85-123 88-124 (367)
222 3kzq_A Putative uncharacterize 94.8 0.023 7.7E-07 38.7 3.4 40 85-125 166-205 (208)
223 3qcp_A QSOX from trypanosoma b 94.7 0.072 2.5E-06 41.3 6.2 27 3-29 58-91 (470)
224 2djk_A PDI, protein disulfide- 94.4 0.1 3.4E-06 32.8 5.5 39 85-124 73-116 (133)
225 1ilo_A Conserved hypothetical 94.3 0.028 9.7E-07 31.4 2.5 29 85-118 47-76 (77)
226 2ywm_A Glutaredoxin-like prote 94.0 0.27 9.4E-06 33.3 7.4 37 85-122 78-114 (229)
227 3evi_A Phosducin-like protein 93.8 0.094 3.2E-06 32.7 4.4 35 85-120 70-111 (118)
228 2trc_P Phosducin, MEKA, PP33; 93.5 0.071 2.4E-06 36.8 3.7 36 85-121 169-211 (217)
229 2lqo_A Putative glutaredoxin R 93.1 0.21 7E-06 29.9 4.9 68 39-123 17-84 (92)
230 3gv1_A Disulfide interchange p 93.1 0.084 2.9E-06 34.3 3.4 35 85-124 106-140 (147)
231 2qc7_A ERP31, ERP28, endoplasm 92.5 0.33 1.1E-05 34.1 6.1 36 85-121 78-117 (240)
232 2ec4_A FAS-associated factor 1 92.0 0.3 1E-05 32.8 5.1 38 85-122 127-167 (178)
233 2c0g_A ERP29 homolog, windbeut 91.8 0.8 2.7E-05 32.3 7.4 36 85-122 90-131 (248)
234 2in3_A Hypothetical protein; D 91.5 0.26 8.8E-06 33.2 4.4 38 85-123 173-210 (216)
235 3q6o_A Sulfhydryl oxidase 1; p 91.1 0.37 1.3E-05 33.2 5.0 37 85-121 202-238 (244)
236 3f4s_A Alpha-DSBA1, putative u 91.0 0.1 3.6E-06 36.2 2.1 37 85-124 168-212 (226)
237 3h93_A Thiol:disulfide interch 89.7 0.15 5.2E-06 33.8 1.9 37 85-124 149-185 (192)
238 2fgx_A Putative thioredoxin; N 89.3 0.61 2.1E-05 28.6 4.4 29 86-118 78-106 (107)
239 3gmf_A Protein-disulfide isome 89.1 0.44 1.5E-05 32.5 3.9 34 85-124 165-198 (205)
240 3feu_A Putative lipoprotein; a 89.0 0.38 1.3E-05 32.1 3.5 37 85-124 149-185 (185)
241 4dvc_A Thiol:disulfide interch 89.0 0.38 1.3E-05 31.2 3.5 37 85-124 147-183 (184)
242 2b5e_A Protein disulfide-isome 88.7 0.28 9.7E-06 37.5 3.0 38 85-123 428-467 (504)
243 1wjk_A C330018D20RIK protein; 88.2 0.65 2.2E-05 27.7 3.9 33 87-124 65-97 (100)
244 3kp8_A Vkorc1/thioredoxin doma 87.8 0.59 2E-05 28.2 3.6 28 85-118 63-90 (106)
245 1eej_A Thiol:disulfide interch 87.4 0.31 1.1E-05 33.2 2.3 33 85-122 178-210 (216)
246 1z6m_A Conserved hypothetical 86.7 0.54 1.9E-05 30.5 3.1 29 85-119 146-174 (175)
247 3c7m_A Thiol:disulfide interch 86.7 0.47 1.6E-05 31.2 2.8 37 85-124 159-195 (195)
248 1t3b_A Thiol:disulfide interch 86.3 0.43 1.5E-05 32.5 2.5 32 85-121 178-209 (211)
249 3gha_A Disulfide bond formatio 86.0 0.73 2.5E-05 31.1 3.6 34 85-124 160-193 (202)
250 3uem_A Protein disulfide-isome 85.9 2.5 8.6E-05 30.6 6.7 38 85-123 188-230 (361)
251 3bci_A Disulfide bond protein 85.6 0.69 2.4E-05 30.4 3.2 33 85-123 146-178 (186)
252 3kgk_A Arsenical resistance op 84.7 5.2 0.00018 24.8 7.1 27 3-29 23-49 (110)
253 3iv4_A Putative oxidoreductase 82.9 0.79 2.7E-05 28.5 2.4 33 85-118 77-111 (112)
254 3gl5_A Putative DSBA oxidoredu 82.8 1.6 5.5E-05 30.3 4.2 35 85-124 180-214 (239)
255 1h75_A Glutaredoxin-like prote 82.1 1.4 4.9E-05 24.4 3.2 64 40-123 15-78 (81)
256 4gxt_A A conserved functionall 80.3 12 0.0004 27.9 8.4 42 6-56 223-264 (385)
257 3ga4_A Dolichyl-diphosphooligo 78.5 11 0.00039 25.0 7.1 23 6-29 63-90 (178)
258 1r7h_A NRDH-redoxin; thioredox 78.0 2.6 8.8E-05 22.8 3.3 59 40-118 15-73 (75)
259 3hd5_A Thiol:disulfide interch 76.4 1.3 4.4E-05 29.2 2.0 25 4-29 42-66 (195)
260 1a8l_A Protein disulfide oxido 76.3 2.5 8.7E-05 28.2 3.5 37 85-122 75-112 (226)
261 2k8s_A Thioredoxin; dimer, str 74.1 5.8 0.0002 21.9 4.2 17 85-104 52-68 (80)
262 4f9z_D Endoplasmic reticulum r 73.5 18 0.00061 24.3 8.7 37 88-124 189-226 (227)
263 3nzn_A Glutaredoxin; structura 72.9 2.7 9.2E-05 24.8 2.6 65 40-118 36-101 (103)
264 3hz8_A Thiol:disulfide interch 71.2 3.9 0.00013 27.1 3.4 33 85-123 151-183 (193)
265 2a4h_A Selenoprotein SEP15; re 69.9 6 0.0002 25.1 3.7 61 40-123 36-97 (126)
266 2v2f_A Penicillin binding prot 69.2 3 0.0001 18.5 1.7 15 91-105 6-20 (26)
267 1r4w_A Glutathione S-transfera 69.1 3.3 0.00011 28.1 2.7 34 85-120 179-212 (226)
268 3bid_A UPF0339 protein NMB1088 67.4 11 0.00039 20.8 4.2 34 90-123 13-46 (64)
269 3gwi_A Magnesium-transporting 65.5 6.8 0.00023 25.7 3.6 28 2-29 110-137 (170)
270 2imf_A HCCA isomerase, 2-hydro 65.3 4 0.00014 27.1 2.5 33 85-123 164-196 (203)
271 3ktb_A Arsenical resistance op 62.9 15 0.0005 22.5 4.5 27 3-29 26-52 (106)
272 3t58_A Sulfhydryl oxidase 1; o 61.6 4 0.00014 31.7 2.1 23 85-107 202-224 (519)
273 2djj_A PDI, protein disulfide- 61.3 12 0.00041 21.9 4.0 27 3-29 41-71 (121)
274 2hze_A Glutaredoxin-1; thiored 60.0 4.7 0.00016 24.2 1.9 52 40-103 33-87 (114)
275 1ego_A Glutaredoxin; electron 59.9 19 0.00065 19.6 5.2 27 86-121 56-82 (85)
276 3l9v_A Putative thiol-disulfid 58.8 9.6 0.00033 25.0 3.4 37 85-124 142-184 (189)
277 3rhb_A ATGRXC5, glutaredoxin-C 58.7 19 0.00065 21.2 4.6 53 40-103 33-85 (113)
278 3ic4_A Glutaredoxin (GRX-1); s 58.6 22 0.00075 19.9 5.1 65 40-119 26-91 (92)
279 2a2p_A Selenoprotein M, SELM p 57.2 17 0.00057 23.1 4.1 32 89-120 56-88 (129)
280 1hyu_A AHPF, alkyl hydroperoxi 53.8 15 0.00051 28.2 4.2 32 85-121 167-198 (521)
281 3gn3_A Putative protein-disulf 52.9 5.6 0.00019 26.3 1.5 31 85-118 151-181 (182)
282 3msz_A Glutaredoxin 1; alpha-b 51.1 29 0.00098 19.0 6.3 67 40-123 18-87 (89)
283 3kp9_A Vkorc1/thioredoxin doma 50.4 12 0.00041 26.9 2.9 28 85-118 248-275 (291)
284 2cq9_A GLRX2 protein, glutared 50.4 5.1 0.00017 24.8 0.9 53 40-104 41-93 (130)
285 1iv0_A Hypothetical protein; r 50.4 31 0.0011 20.4 4.4 56 4-63 38-94 (98)
286 2jwk_A Protein TOLR; periplasm 49.5 26 0.00088 19.0 3.8 33 90-122 4-40 (74)
287 1kte_A Thioltransferase; redox 49.5 11 0.00037 21.8 2.2 52 40-103 26-80 (105)
288 1fov_A Glutaredoxin 3, GRX3; a 49.2 30 0.001 18.6 4.2 48 40-102 15-62 (82)
289 3l9s_A Thiol:disulfide interch 47.0 15 0.0005 24.3 2.8 37 85-124 148-190 (191)
290 3h8q_A Thioredoxin reductase 3 44.7 39 0.0013 20.0 4.3 51 40-102 31-81 (114)
291 2p08_A Signal transduction his 44.7 12 0.00042 22.9 2.0 18 88-105 10-27 (115)
292 1nu0_A Hypothetical protein YQ 44.3 33 0.0011 21.7 4.0 57 5-65 41-99 (138)
293 2ht9_A Glutaredoxin-2; thiored 44.1 6.6 0.00023 25.0 0.7 52 40-103 63-114 (146)
294 1u07_A TONB protein; beta-hair 43.8 10 0.00035 21.8 1.5 16 90-105 28-43 (90)
295 2k49_A UPF0339 protein SO_3888 42.3 58 0.002 20.1 4.8 33 90-122 66-98 (118)
296 4b14_A Glycylpeptide N-tetrade 42.0 30 0.001 26.0 4.0 75 1-102 231-305 (385)
297 3qmx_A Glutaredoxin A, glutare 40.2 33 0.0011 19.9 3.4 17 40-57 30-46 (99)
298 2j58_A WZA, outer membrane lip 39.6 40 0.0014 24.8 4.4 33 92-124 97-134 (359)
299 3t12_B Gliding protein MGLB; G 39.5 35 0.0012 21.6 3.6 17 89-105 26-42 (136)
300 1aba_A Glutaredoxin; electron 39.4 38 0.0013 18.8 3.5 18 40-58 18-35 (87)
301 1wz3_A Autophagy 12B, ATG12B, 38.4 34 0.0012 20.3 3.2 20 9-28 72-91 (96)
302 1m2d_A [2Fe-2S] ferredoxin; th 37.9 35 0.0012 20.4 3.3 28 90-122 63-90 (110)
303 4as2_A Phosphorylcholine phosp 37.8 23 0.00079 25.7 2.8 34 6-47 145-178 (327)
304 3hn9_A Lamin-B1; structural ge 37.6 27 0.00091 21.8 2.8 16 90-105 100-115 (123)
305 2yan_A Glutaredoxin-3; oxidore 37.5 38 0.0013 19.6 3.4 49 40-103 36-84 (105)
306 3ghf_A Septum site-determining 37.3 48 0.0016 20.4 3.9 39 8-57 62-100 (120)
307 2hls_A Protein disulfide oxido 37.1 25 0.00085 24.0 2.8 34 85-122 83-116 (243)
308 3iu1_A Glycylpeptide N-tetrade 37.0 50 0.0017 24.8 4.5 77 1-103 228-304 (383)
309 3fz5_A Possible 2-hydroxychrom 36.1 24 0.00081 23.3 2.5 30 85-120 170-199 (202)
310 2khp_A Glutaredoxin; thioredox 35.3 58 0.002 18.0 4.0 17 40-57 20-36 (92)
311 2lju_A Putative oxidoreductase 35.3 26 0.0009 21.5 2.4 20 37-57 67-86 (108)
312 3bj5_A Protein disulfide-isome 34.9 83 0.0028 19.6 7.2 36 88-124 90-128 (147)
313 1sk4_A Peptidoglycan recogniti 34.6 19 0.00066 23.3 1.8 15 89-103 62-76 (163)
314 1yck_A Peptidoglycan recogniti 34.5 19 0.00066 23.7 1.8 15 89-103 72-86 (175)
315 3bqa_A Sensor protein PHOQ; hi 34.4 25 0.00086 22.7 2.2 28 90-120 41-69 (148)
316 2cb3_A Peptidoglycan-recogniti 33.8 20 0.00068 23.6 1.8 15 89-103 68-82 (175)
317 3cwf_A Alkaline phosphatase sy 33.4 19 0.00066 21.5 1.6 14 92-105 51-64 (122)
318 2f2l_X Peptidoglycan recogniti 33.0 21 0.00072 23.3 1.8 15 89-103 64-78 (167)
319 1lba_A T7 lysozyme; hydrolase( 32.5 22 0.00075 22.5 1.8 14 90-103 41-54 (146)
320 2k8e_A UPF0339 protein YEGP; p 32.3 82 0.0028 19.8 4.4 33 90-122 82-114 (130)
321 3jt0_A Lamin-B1; structural ge 31.6 37 0.0013 21.8 2.8 17 90-106 113-129 (144)
322 3ipz_A Monothiol glutaredoxin- 31.2 73 0.0025 18.7 4.0 40 14-58 13-54 (109)
323 2xz4_A Peptidoglycan-recogniti 30.9 24 0.00082 23.3 1.8 15 89-103 71-85 (180)
324 2obb_A Hypothetical protein; s 30.7 78 0.0027 20.0 4.2 45 7-57 27-71 (142)
325 2rkq_A Peptidoglycan-recogniti 30.5 25 0.00084 23.0 1.8 15 89-103 65-79 (169)
326 2jya_A AGR_C_3324P, uncharacte 30.1 24 0.00083 21.5 1.6 20 37-57 59-78 (106)
327 2hz5_A Dynein light chain 2A, 30.0 22 0.00075 21.6 1.4 16 90-105 28-43 (106)
328 2xz8_A Peptidoglycan-recogniti 30.0 21 0.0007 23.1 1.3 15 89-103 70-84 (150)
329 2grx_C Protein TONB; beta barr 30.0 40 0.0014 23.4 2.9 17 90-106 167-183 (229)
330 4gdk_A Ubiquitin-like protein 29.8 61 0.0021 19.0 3.3 21 8-28 66-86 (91)
331 1sxr_A Peptidoglycan recogniti 29.2 26 0.00091 23.2 1.8 15 89-103 74-88 (183)
332 2k9k_A TONB2; metal transport; 29.2 33 0.0011 20.2 2.1 17 90-106 43-59 (106)
333 3m7a_A Uncharacterized protein 28.3 44 0.0015 21.3 2.7 15 91-105 85-99 (140)
334 1f89_A 32.5 kDa protein YLR351 28.0 41 0.0014 23.4 2.8 16 91-106 112-127 (291)
335 3p8k_A Hydrolase, carbon-nitro 27.9 42 0.0014 23.4 2.8 16 91-106 114-129 (281)
336 3ep1_A PGRP-HD - peptidoglycan 27.6 24 0.00081 23.5 1.3 15 89-103 78-92 (176)
337 1uf5_A N-carbamyl-D-amino acid 27.5 43 0.0015 23.4 2.8 16 91-106 110-125 (303)
338 2f2l_A Peptidoglycan-recogniti 27.2 24 0.00083 23.0 1.3 15 89-103 63-77 (167)
339 2w1v_A Nitrilase-2, nitrilase 27.2 44 0.0015 23.1 2.8 15 91-105 96-110 (276)
340 1oht_A CG14704 protein; peptid 27.1 29 0.001 23.7 1.8 15 89-103 76-90 (215)
341 3hkx_A Amidase; alpha-beta-BET 26.7 45 0.0015 23.3 2.8 16 91-106 115-130 (283)
342 3pjy_A Hypothetical signal pep 26.6 45 0.0015 21.1 2.5 15 91-105 71-85 (136)
343 2gx5_A GTP-sensing transcripti 26.5 98 0.0034 20.4 4.2 15 92-106 49-63 (170)
344 3a0s_A Sensor protein; PAS-fol 26.3 37 0.0013 17.4 1.9 13 92-104 5-17 (96)
345 2k7i_A UPF0339 protein ATU0232 26.3 73 0.0025 18.5 3.1 33 90-122 35-67 (83)
346 3k6e_A CBS domain protein; str 26.3 58 0.002 20.3 3.0 28 92-123 118-145 (156)
347 4hi4_A Aerotaxis transducer AE 25.9 37 0.0013 19.6 1.9 13 92-104 18-30 (121)
348 4fqn_A Malcavernin; helical do 25.8 45 0.0015 20.0 2.2 18 1-18 29-46 (98)
349 3b33_A Sensor protein; structu 25.6 46 0.0016 18.5 2.3 13 92-104 20-32 (115)
350 1ifr_A Lamin A/C; immunoglobul 25.4 58 0.002 20.2 2.8 17 90-106 95-111 (121)
351 3h9u_A Adenosylhomocysteinase; 25.3 50 0.0017 25.2 2.9 24 2-25 21-48 (436)
352 3by9_A Sensor protein; histidi 25.2 49 0.0017 21.9 2.7 16 90-105 164-179 (260)
353 3gby_A Uncharacterized protein 25.1 72 0.0025 18.7 3.2 28 90-121 100-127 (128)
354 1s2j_A Peptidoglycan recogniti 25.1 34 0.0011 23.3 1.8 15 89-103 100-114 (209)
355 3rpp_A Glutathione S-transfera 25.1 49 0.0017 22.5 2.6 35 85-121 179-213 (234)
356 3c1r_A Glutaredoxin-1; oxidize 25.1 1.1E+02 0.0039 18.0 4.3 52 40-103 39-94 (118)
357 3gvp_A Adenosylhomocysteinase 25.0 48 0.0017 25.3 2.8 24 2-25 32-59 (435)
358 3ce6_A Adenosylhomocysteinase; 24.9 50 0.0017 25.5 2.9 24 2-25 38-65 (494)
359 2dyu_A Formamidase; AMIF, CEK, 24.5 51 0.0018 23.7 2.8 16 91-106 117-132 (334)
360 2klx_A Glutaredoxin; thioredox 24.3 79 0.0027 17.3 3.1 18 39-57 19-36 (89)
361 3c8c_A Methyl-accepting chemot 24.2 34 0.0012 22.2 1.7 14 91-104 161-174 (240)
362 2q37_A OHCU decarboxylase; 2-O 24.0 56 0.0019 21.7 2.7 23 2-24 109-132 (181)
363 3o2i_A Uncharacterized protein 23.9 76 0.0026 19.1 2.9 30 95-124 90-119 (125)
364 2uxy_A Aliphatic amidase; nitr 23.8 54 0.0018 23.7 2.8 16 91-106 118-133 (341)
365 3w1s_C Ubiquitin-like protein 23.8 91 0.0031 18.3 3.3 21 8-28 66-86 (91)
366 3ond_A Adenosylhomocysteinase; 23.6 48 0.0016 25.7 2.5 24 2-25 35-62 (488)
367 1j3g_A AMPD protein, AMPD; mix 23.2 35 0.0012 22.6 1.5 14 90-103 73-86 (187)
368 1v8b_A Adenosylhomocysteinase; 23.0 54 0.0018 25.3 2.7 24 2-25 24-51 (479)
369 3n58_A Adenosylhomocysteinase; 22.9 53 0.0018 25.4 2.6 24 2-25 23-50 (464)
370 2po1_B Probable exosome comple 22.6 1.4E+02 0.0046 20.8 4.6 31 91-121 224-257 (277)
371 3fg8_A Uncharacterized protein 22.5 57 0.0019 18.6 2.3 16 89-104 21-37 (118)
372 1wik_A Thioredoxin-like protei 22.5 98 0.0034 17.9 3.4 18 39-57 33-50 (109)
373 3fvv_A Uncharacterized protein 22.0 1.6E+02 0.0056 18.8 4.8 39 6-53 94-132 (232)
374 1ufg_A Lamin A, nuclear lamin; 21.7 70 0.0024 20.7 2.7 15 91-105 127-141 (151)
375 3lif_A Putative diguanylate cy 21.6 53 0.0018 21.8 2.2 16 91-106 168-183 (254)
376 2e11_A Hydrolase; dimethylarse 21.6 59 0.002 22.2 2.5 15 90-105 93-107 (266)
377 2pfu_A Biopolymer transport EX 21.4 43 0.0015 19.2 1.6 33 90-123 21-53 (99)
378 2nw5_A Methionine aminopeptida 21.4 51 0.0018 24.3 2.2 15 88-102 339-353 (360)
379 1iyk_A Myristoyl-COA:protein N 21.2 2.1E+02 0.0072 21.5 5.5 75 1-101 211-290 (392)
380 3olo_A Two-component sensor hi 21.1 62 0.0021 17.6 2.2 13 92-104 26-38 (118)
381 2vhh_A CG3027-PA; hydrolase; 2 20.9 65 0.0022 23.9 2.8 16 91-106 181-196 (405)
382 1t1v_A SH3BGRL3, SH3 domain-bi 20.9 1E+02 0.0035 17.2 3.2 17 40-57 22-38 (93)
383 2l82_A Designed protein OR32; 20.8 1.6E+02 0.0054 18.2 4.6 40 8-56 67-108 (162)
384 2r78_A Sensor protein; sensory 20.8 63 0.0021 18.3 2.2 13 92-104 24-36 (117)
385 3lic_A Sensor protein; PDC fol 20.7 45 0.0015 22.3 1.8 14 91-104 182-195 (274)
386 4ann_A ESSB; membrane protein, 20.6 75 0.0025 21.8 2.8 19 89-107 106-124 (215)
387 2h8l_A Protein disulfide-isome 20.5 1.6E+02 0.0053 19.8 4.5 36 87-123 193-230 (252)
388 3zyw_A Glutaredoxin-3; metal b 20.4 1.4E+02 0.0049 17.5 4.0 17 40-57 35-51 (111)
389 3ztp_A Nucleoside diphosphate 20.3 1.5E+02 0.005 18.8 4.0 34 9-48 20-53 (142)
390 4hr2_A Nucleoside diphosphate 20.2 1.5E+02 0.005 18.9 4.0 34 9-48 24-57 (145)
391 1k44_A Nucleoside diphosphate 20.0 1.5E+02 0.0052 18.5 4.0 35 9-49 19-53 (136)
392 2lll_A Lamin-B2; immunoglobuli 20.0 83 0.0029 20.0 2.8 15 91-105 111-125 (139)
No 1
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.9e-26 Score=161.93 Aligned_cols=123 Identities=41% Similarity=0.675 Sum_probs=104.6
Q ss_pred ChhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH-----hhCCcccceeEeeccCCCccchHHHHHHh
Q 033221 2 TNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKS 76 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~-----~~~~~~fpv~~~~D~~g~~~~~~~~~l~~ 76 (125)
+. |||.|++||++|+++|++||||++|+|+.+++++.+++++|++ .+++++||++.+.|.+|..+.++|+++..
T Consensus 71 c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~ 149 (215)
T 2i3y_A 71 TA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKH 149 (215)
T ss_dssp GG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHH
T ss_pred hH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHh
Confidence 45 9999999999999999999999999998888888899999994 17899999996667778888889998865
Q ss_pred CCCC---CCC------------CCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 77 GKWG---IFG------------DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 77 ~~~~---~~g------------~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
..++ .+| ..|.|+|+|||||++|+|+.++.|.+++++|++.|+++|+++
T Consensus 150 ~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~~~ 213 (215)
T 2i3y_A 150 SCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQF 213 (215)
T ss_dssp HSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGGGC
T ss_pred hCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4321 121 146788999999999999999999999999999999999874
No 2
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.93 E-value=2.1e-25 Score=156.60 Aligned_cols=121 Identities=40% Similarity=0.708 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH-----hhCCcccceeEeeccCCCccchHHHHHHhCC
Q 033221 4 SNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~-----~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
+|||.|++||++|+++|++||||++|+|+.+++++.+++++|++ .+++++||++.+.|.+|....++|+++....
T Consensus 54 ~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~ 133 (207)
T 2r37_A 54 GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 133 (207)
T ss_dssp THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhC
Confidence 69999999999999999999999999887788888899999994 1789999999666777888888898876543
Q ss_pred CC---CCC------------CCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 79 WG---IFG------------DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 79 ~~---~~g------------~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++ .+| ..|.|+|+|||||++|+|+.++.|.+++++|++.|+++|++
T Consensus 134 ~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 134 PPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp CCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 21 121 13678899999999999999999999999999999999865
No 3
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.91 E-value=7.5e-24 Score=148.53 Aligned_cols=123 Identities=36% Similarity=0.678 Sum_probs=102.7
Q ss_pred ChhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH-----hhCCcccceeEeeccCCCccchHHHHHHh
Q 033221 2 TNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVC-----TRFKSEFPIFEKIDVNGEHASPLYKLLKS 76 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~-----~~~~~~fpv~~~~D~~g~~~~~~~~~l~~ 76 (125)
...|||.|++++++|+++|++||+|++++|+.+++++.+++++|++ .+++++||++.+.|.+|....++|.++..
T Consensus 62 C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~ 141 (208)
T 2f8a_A 62 TVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLRE 141 (208)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHh
Confidence 3578999999999999999999999999877677778899999995 27899999997667788888788988764
Q ss_pred CCCCC-------C------------CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 77 GKWGI-------F------------GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 77 ~~~~~-------~------------g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
..++. + +..+.|+|+|||||++|+|+.++.|..++++|++.|+++|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 142 ALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp HSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred cCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHhhC
Confidence 33210 1 014788999999999999999999999999999999999864
No 4
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.89 E-value=4.8e-23 Score=141.66 Aligned_cols=121 Identities=46% Similarity=0.867 Sum_probs=102.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..|||.|++++++|+++|++||+|++|+++.+++++.+++++|++++++++||++.+.|.+|..+.++|+++....++.|
T Consensus 62 ~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~ 141 (187)
T 3dwv_A 62 KGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL 141 (187)
T ss_dssp TTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB
T ss_pred HHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCcc
Confidence 57899999999999999999999999987777777889999999546799999996568889888889998887665555
Q ss_pred CCCcccce---eeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 83 GDDIQWNF---AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 83 g~~i~~~P---ttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
| +..+| ++||||++|+|+.++.|..++++|++.|+++|+.+
T Consensus 142 ~--~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 142 A--TKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp S--SSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC---
T ss_pred C--CCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3 45566 99999999999999999999999999999998754
No 5
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.89 E-value=2.4e-22 Score=134.77 Aligned_cols=122 Identities=46% Similarity=0.832 Sum_probs=101.9
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHH-HHhhCCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADF-VCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f-~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++|+++|++||+|++|+++.+++++.+.+++| .+ +++++||++.+.|.+|....++|+++.....+.
T Consensus 47 ~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~ 125 (169)
T 2v1m_A 47 DKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTE-KYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGT 125 (169)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHH-HHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHH-hcCCCCceEEEEeecCccccHHHHHHHhhcCCc
Confidence 4789999999999999999999999987766677788999999 55 689999999544888887777888776543333
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
.|..+.++|++||||++|+|+.++.|..+++.|.+.|+++|++.
T Consensus 126 ~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 126 LTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp SSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHCC
T ss_pred cCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhccC
Confidence 32237788999999999999999999999999999999998763
No 6
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.89 E-value=1.9e-22 Score=138.35 Aligned_cols=119 Identities=49% Similarity=0.918 Sum_probs=99.6
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCC--C
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW--G 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~--~ 80 (125)
..|+|.|++++++|+++|++||+|++|+|..+++++.+++++|++ +++++||++.+.|.+|....++|+++....+ +
T Consensus 65 ~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g 143 (185)
T 2gs3_A 65 EVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKG 143 (185)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHH-HTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCC
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHH-HcCCCCeeeeeeccCChhhhHHHHHHHhhccccc
Confidence 579999999999999999999999998776667778899999994 7899999995447788877778887765432 2
Q ss_pred CCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
..|..++|+|++||||++|+|+.++.|..++++|.+.|+++|
T Consensus 144 ~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 185 (185)
T 2gs3_A 144 ILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 185 (185)
T ss_dssp SSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHHC
T ss_pred ccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHhC
Confidence 222247789999999999999999999999999999998875
No 7
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.89 E-value=2.1e-22 Score=135.14 Aligned_cols=123 Identities=85% Similarity=1.431 Sum_probs=100.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++|++||+|++|.++.+++++.+.+++|++++++++||++.+.|.++....++|+++.....+.+
T Consensus 48 ~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~ 127 (170)
T 2p5q_A 48 NSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIF 127 (170)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCcc
Confidence 47999999999999999999999999876666667889999999536899999995558888887778877654321112
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
+..+.|.|++||||++|+|+.++.|..++++|.+.|+++|++|
T Consensus 128 ~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~s 170 (170)
T 2p5q_A 128 GDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEIS 170 (170)
T ss_dssp CSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTCC
T ss_pred CCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhcC
Confidence 1123444499999999999999999999999999999999886
No 8
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.88 E-value=6.4e-22 Score=135.27 Aligned_cols=119 Identities=49% Similarity=0.918 Sum_probs=99.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCC--C
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW--G 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~--~ 80 (125)
..++|.|++++++|+++|++||+|++|+++.+++++.+++++|++ +++++||++.+.|.++....++|+++..... +
T Consensus 63 ~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g 141 (183)
T 2obi_A 63 EVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKG 141 (183)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-TTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCC
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHH-HcCCCceEEeeeccCCcchhHHHHHhhccCCCCC
Confidence 578999999999999999999999998776667778999999994 7899999994448888877778888776532 2
Q ss_pred CCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
..+..+.++|++||||++|+|+.++.|..++++|.+.|+++|
T Consensus 142 ~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 183 (183)
T 2obi_A 142 ILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 183 (183)
T ss_dssp SSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGGC
T ss_pred cccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 232247788999999999999999999999999988887765
No 9
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.85 E-value=8.6e-21 Score=129.44 Aligned_cols=116 Identities=34% Similarity=0.728 Sum_probs=97.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhh-CCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR-FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~-~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..|||.|++++++|+++|++||+|++++|+.+++++.+++++|++ + ++++||++.+.|..|....++|.++....+
T Consensus 54 ~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-- 130 (180)
T 3kij_A 54 DRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFAR-KNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK-- 130 (180)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHH-HhcCCCCceeeeeeccCccccHHHHHHHhcCC--
Confidence 579999999999999999999999999887777788999999995 6 899999986567778777778877765321
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
..+.|++++||||++|+|+.++.|..+++.+.+.|+++|+
T Consensus 131 --~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 131 --KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp --CCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred --CCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 1244555599999999999999999999888888887765
No 10
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.85 E-value=2.3e-20 Score=128.40 Aligned_cols=121 Identities=48% Similarity=0.939 Sum_probs=98.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHH-HhhCCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~-~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..|+|.|++++++|+++|++||+|++|+++.+++++.+.+++|+ + +++++||++.+.|.++....++|+++.....+.
T Consensus 64 ~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v 142 (190)
T 2vup_A 64 KGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCT-KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGI 142 (190)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHH-HHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCG
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHH-hcCCCeEEEeecccCcccccHHHHHHHhhcCCc
Confidence 57999999999999999999999999877666667889999999 6 679999999544778888777888775432111
Q ss_pred CCC-CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGD-DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~-~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
.+. .++|+|++||||++|+|+.++.|..++++|.+.|+++|++
T Consensus 143 ~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 143 LKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp GGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred CCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 111 1334449999999999999999999999999999999876
No 11
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.85 E-value=9.4e-21 Score=128.06 Aligned_cols=115 Identities=49% Similarity=0.831 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHH-HhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCC
Q 033221 5 NYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFV-CTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG 83 (125)
Q Consensus 5 e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~-~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g 83 (125)
++|.|++++++|+++|++||+|++++++.+++++.+.+++|+ + +++++||++.+.|.++....++|+++.... |
T Consensus 49 ~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~-~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~---~- 123 (171)
T 3cmi_A 49 QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQL-NYGVTFPIMKKIDVNGGNEDPVYKFLKSQK---S- 123 (171)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSCC-------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHS---C-
T ss_pred hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHh-ccCCCceEEeeccCCCccchHHHHHHHhcc---C-
Confidence 899999999999999999999999866555556778899999 6 689999999544566776777787665432 3
Q ss_pred CCcccce------eeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 84 DDIQWNF------AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 84 ~~i~~~P------ttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
++..+| ++||||++|+|+.++.|..++++|.+.|+++|++|
T Consensus 124 -~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 170 (171)
T 3cmi_A 124 -GMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKEV 170 (171)
T ss_dssp -CSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHTCC
T ss_pred -CcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 355567 99999999999999999999999999999999875
No 12
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.84 E-value=3.6e-20 Score=126.56 Aligned_cols=109 Identities=39% Similarity=0.681 Sum_probs=92.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhh-CCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR-FKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~-~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..|+|.|++++++|+++|++||+|++++++.+++++.+.+++|++ + ++++||++.+.|.+|....++|+++
T Consensus 65 ~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~-~~~~~~~p~~~~~d~~g~~~~~~~~~~------- 136 (181)
T 2p31_A 65 DQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFAR-RTYSVSFPMFSKIAVTGTGAHPAFKYL------- 136 (181)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSCBBCCCCCSSTTSCHHHHHH-------
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHH-hhcCCCceeEeecccCCccchhhhhhh-------
Confidence 479999999999999999999999998776666678899999995 5 8999999954567777766666543
Q ss_pred CCCCcccce-------eeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 82 FGDDIQWNF-------AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 82 ~g~~i~~~P-------ttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+..+| ++||||++|+|+.++.|..++++|.+.|+++|+
T Consensus 137 ----~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 181 (181)
T 2p31_A 137 ----AQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVR 181 (181)
T ss_dssp ----HHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTCC
T ss_pred ----hhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHhC
Confidence 33446 999999999999999999999999999998874
No 13
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.82 E-value=1.8e-19 Score=119.68 Aligned_cols=108 Identities=13% Similarity=0.245 Sum_probs=87.4
Q ss_pred hhh-HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCcc--chHHHHHHhCCC
Q 033221 3 NSN-YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHA--SPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e-~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~--~~~~~~l~~~~~ 79 (125)
..| +|.|++++++|+++|+.||+|+++ +..++.++.+.+++|++ +++++||++ .|..+... ..+.+
T Consensus 46 ~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~~~------- 114 (160)
T 3lor_A 46 VNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTPEALKVFID-EFGIKFPVA--VDMPREGQRIPSTMK------- 114 (160)
T ss_dssp HHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHHHHHHHHH-HTTCCSCEE--EECCCTTCSSCHHHH-------
T ss_pred hhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCHHHHHHHHH-HcCCCCcEE--ECCccccchhhhHHH-------
Confidence 356 999999999999999999999986 33233357899999995 789999999 67665411 10111
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
.| ++.++|++||||++|+|+.++.|..+.+.|.+.|+++|++
T Consensus 115 -~~--~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 115 -KY--RLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp -HT--TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred -hc--ccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 15 4788999999999999999999999999999999999976
No 14
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.82 E-value=2e-19 Score=119.34 Aligned_cols=108 Identities=19% Similarity=0.310 Sum_probs=87.2
Q ss_pred hhh-HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccc-hHHHHHHhCCCC
Q 033221 3 NSN-YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHAS-PLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e-~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~-~~~~~l~~~~~~ 80 (125)
..| +|.|++++++|+++++.||+|+++ +..++.++.+.+++|++ +++++||++ .|.++.... .+.+
T Consensus 44 ~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~~-------- 111 (158)
T 3eyt_A 44 VMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMTPISLKAFLH-EYRIKFPVG--VDQPGDGAMPRTMA-------- 111 (158)
T ss_dssp HHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHHHHHHHHH-HTTCCSCEE--EECCCSSSSCHHHH--------
T ss_pred hhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCCHHHHHHHHH-HcCCCceEE--EcCccchhhHHHHH--------
Confidence 356 999999999999889999999986 22223457899999995 789999999 676653210 1211
Q ss_pred CCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
.| ++.++|++||||++|+|+.++.|..+.++|.+.|+++|++
T Consensus 112 ~~--~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 112 AY--QMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp HT--TCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred Hc--CCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 15 4888999999999999999999999999999999999876
No 15
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.75 E-value=1.9e-17 Score=109.28 Aligned_cols=102 Identities=13% Similarity=0.196 Sum_probs=83.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.||+|+++ +.+.+++|++ +++++||++ .|..+.. ..+++ .|
T Consensus 40 ~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~~~-~~~~~~~~~--~~~~~~~-~~~~~--------~~ 99 (151)
T 3raz_A 40 RKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNFLK-QTPVSYPIW--RYTGANS-RNFMK--------TY 99 (151)
T ss_dssp HHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHHHH-HSCCSSCEE--EECCSCH-HHHHH--------TT
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHHHH-HcCCCCceE--ecCccch-HHHHH--------Hh
Confidence 478999999999999899999999974 4788999995 789999999 5543332 22222 25
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
|..+.++|++||||++|+|+.++.|..+.++|.+.|+++++.
T Consensus 100 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 100 GNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp TCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC
T ss_pred CCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 333788999999999999999999999999999999998764
No 16
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.75 E-value=2.6e-17 Score=111.94 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=85.9
Q ss_pred hhhHHHHHHHHHHhccCCe------EEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHh
Q 033221 3 NSNYIELSQLYDKYKDQGL------EILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKS 76 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~------~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~ 76 (125)
..++|.|++++++|+++|+ .||+|+++. ++.+.+++|++ +++++||++ .|.++.....
T Consensus 75 ~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~------~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------- 138 (183)
T 3lwa_A 75 RSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD------YSRDIAQDFVT-DNGLDYPSI--YDPPFMTAAS------- 138 (183)
T ss_dssp HHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC------CCHHHHHHHHH-HTTCCSCEE--ECTTCGGGGG-------
T ss_pred HHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC------CCHHHHHHHHH-HcCCCccEE--ECCcchHHHH-------
Confidence 4689999999999999999 999999861 25889999995 789999999 6877765542
Q ss_pred CCCCCCC-CCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 77 GKWGIFG-DDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 77 ~~~~~~g-~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
|| +++.++|++||||++|+|+.++.|..+.++|.+.|+++|++.
T Consensus 139 -----~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~a 183 (183)
T 3lwa_A 139 -----LGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVDEA 183 (183)
T ss_dssp -----TTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHHC-
T ss_pred -----hccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhcC
Confidence 32 257889999999999999999999999999999999998763
No 17
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.74 E-value=1.2e-17 Score=117.23 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++|++||+|+++++..++.++.+.+++|++ +++++||++ .|.++..+.. |
T Consensus 75 ~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~-~~~~~~~~l--~D~~~~~~~~------------~ 139 (218)
T 3u5r_E 75 VLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVK-AYGYGFPYL--KDASQSVAKA------------Y 139 (218)
T ss_dssp HTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHH-HHTCCSCEE--ECTTCHHHHH------------H
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHH-HhCCCccEE--ECCccHHHHH------------c
Confidence 578999999999999999999999997654433467899999995 789999999 6766554432 4
Q ss_pred CCCcccceeeEEECCCCcEEEEEc---------CCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYY---------PTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~---------G~~~~~~l~~~I~~ll~~ 124 (125)
++..+|++||||++|+|+++.. +..+.++|++.|+++|+.
T Consensus 140 --~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 140 --GAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp --TCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred --CCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 4788899999999999998753 244578899999999864
No 18
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.73 E-value=1.2e-17 Score=114.53 Aligned_cols=105 Identities=19% Similarity=0.218 Sum_probs=85.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.||+|+++....++.++.+.+++|++ +++++||++ .|.++..... |
T Consensus 62 ~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 126 (196)
T 2ywi_A 62 KHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAE-ELGYPFPYL--YDETQEVAKA------------Y 126 (196)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHH-HHTCCSCEE--ECSSCHHHHH------------H
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHH-HcCCCceEE--ECCchHHHHH------------h
Confidence 478999999999999999999999987432222357899999995 689999999 6766544332 4
Q ss_pred CCCcccceeeEEECCCCcEEEEE---------cCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRY---------YPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~---------~G~~~~~~l~~~I~~ll~~ 124 (125)
++..+|++||||++|+|++++ .|..+.++|++.|++++++
T Consensus 127 --~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 127 --DAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp --TCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred --CCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 478889999999999999994 5777889999999999864
No 19
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=5.9e-17 Score=106.82 Aligned_cols=98 Identities=19% Similarity=0.308 Sum_probs=79.7
Q ss_pred hhhHHHHHHHHHHh-ccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKY-KDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y-~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++| +++|+.||+|+++ ++.+.+++|++ +++++||++ .|..+.... +.+ .
T Consensus 51 ~~~~~~l~~l~~~~~~~~~~~~v~v~~d-------~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~--------~ 111 (150)
T 3fw2_A 51 KQSNSELREIYKKYKKNKYIGMLGISLD-------VDKQQWKDAIK-RDTLDWEQV--CDFGGLNSE-VAK--------Q 111 (150)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEEECC-------SCHHHHHHHHH-HTTCCSEEE--CCSCGGGCH-HHH--------H
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEEcC-------CCHHHHHHHHH-HhCCCceEE--EcCcccchH-HHH--------H
Confidence 57899999999999 8889999999986 24788999995 789999999 665332211 221 1
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| ++.++|++||||++|+|+.++. +.+++++.|+++|++
T Consensus 112 ~--~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 112 Y--SIYKIPANILLSSDGKILAKNL---RGEELKKKIENIVEE 149 (150)
T ss_dssp T--TCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHHHH
T ss_pred c--CCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHHhc
Confidence 5 4788999999999999999984 788999999999875
No 20
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.71 E-value=7e-17 Score=110.87 Aligned_cols=95 Identities=15% Similarity=0.221 Sum_probs=76.9
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC----CcccceeEeeccCCCccchHHHHHHhCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~----~~~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
..|||.|++++++|+++|++||+|+.| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 47 ~~e~~~l~~~~~~~~~~~v~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~fp~l--~D~~~~~~~~--------- 106 (186)
T 1n8j_A 47 PTELGDVADHYEELQKLGVDVYSVSTD--------THFTHKAWHS-SSETIAKIKYAMI--GDPTGALTRN--------- 106 (186)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEEESS--------CHHHHHHHHH-HCTTGGGCCSEEE--ECTTSHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HcCcccCCceeEE--ECCchHHHHH---------
Confidence 479999999999999999999999974 4778899995 78 8999999 6766554432
Q ss_pred CCCCCCCcc------cceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 79 WGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 79 ~~~~g~~i~------~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
|| +. .+|++||||++|+|++++.|.. +.+++.+.|+.+.
T Consensus 107 ---yg--v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 107 ---FD--NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp ---TT--CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ---hC--CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 43 33 4699999999999999998765 4667888887765
No 21
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.71 E-value=9.6e-17 Score=105.70 Aligned_cols=98 Identities=19% Similarity=0.355 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+++ ++.+.+++|++ +++++||++ .|.++..... |
T Consensus 42 ~~~~~~l~~~~~~~~~~~v~vv~v~~d-------~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 99 (151)
T 2f9s_A 42 KKEFPYMANQYKHFKSQGVEIVAVNVG-------ESKIAVHNFMK-SYGVNFPVV--LDTDRQVLDA------------Y 99 (151)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEES-------CCHHHHHHHHH-HHTCCSCEE--EETTSHHHHH------------T
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHHHHHHHH-HcCCCceEE--ECCchHHHHh------------c
Confidence 468999999999999989999999985 24788999995 689999999 6765543331 5
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++|++||||++|+++.++.|..+.++|.+.|+++++.
T Consensus 100 --~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 100 --DVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp --TCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred --CCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 4788999999999999999999999999999999999865
No 22
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.70 E-value=7.7e-17 Score=108.32 Aligned_cols=112 Identities=18% Similarity=0.302 Sum_probs=83.1
Q ss_pred hhhHHHHHHHHHHhccCC--eEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCccc---ceeEeeccCCCccchHHHH--HH
Q 033221 3 NSNYIELSQLYDKYKDQG--LEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF---PIFEKIDVNGEHASPLYKL--LK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g--~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~f---pv~~~~D~~g~~~~~~~~~--l~ 75 (125)
..++|.|++++++|+++| ++||+|++|. +.++.+.+++|+ ++++++| |++ .|.++..... |.. +.
T Consensus 50 ~~~~~~l~~l~~~~~~~~~~~~vv~is~d~----~~d~~~~~~~~~-~~~~~~~~~~~~l--~d~~~~~~~~-~~~~~~~ 121 (174)
T 1xzo_A 50 PPMTAHMTDLQKKLKAENIDVRIISFSVDP----ENDKPKQLKKFA-ANYPLSFDNWDFL--TGYSQSEIEE-FALKSFK 121 (174)
T ss_dssp CSHHHHHHHHHHHHHHTTCCCEEEEEESCT----TTCCHHHHHHHH-TTSCCCGGGEEEE--BCSCHHHHHH-HHHHHHC
T ss_pred HHHHHHHHHHHHHhhhcCCcEEEEEEEeCC----CCCCHHHHHHHH-HHcCCCCcceEEE--eCCCHHHHHH-HHHhhcC
Confidence 468999999999999887 9999999862 235789999999 4789999 777 5544433321 110 00
Q ss_pred ---hCCCCCCCCCcccceeeEEECCCCcEEEEEcCCC--ChhHHHHHHHHhhcc
Q 033221 76 ---SGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDIKKLLGL 124 (125)
Q Consensus 76 ---~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~--~~~~l~~~I~~ll~~ 124 (125)
....+.| .+.+.|++||||++|+|+.++.|.. +.++|.+.|+++|++
T Consensus 122 ~~~~~~~~~~--~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 122 AIVKKPEGED--QVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp CCCCCCSSCC--SCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCC
T ss_pred eeEeecCCCC--eeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 0001112 4667899999999999999999986 478899999999876
No 23
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.70 E-value=3.3e-16 Score=102.01 Aligned_cols=103 Identities=20% Similarity=0.339 Sum_probs=85.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++ +.|++|+++... +..+.+.+++|++ +++++||++ .|.++..... |
T Consensus 45 ~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 106 (148)
T 2b5x_A 45 KEAMPQVNEFRDKYQDQ-LNVVAVHMPRSE--DDLDPGKIKETAA-EHDITQPIF--VDSDHALTDA------------F 106 (148)
T ss_dssp HHHHHHHHHHHHHHTTT-SEEEEEECCCST--TTSSHHHHHHHHH-HTTCCSCEE--ECSSCHHHHH------------T
T ss_pred HHHhHHHHHHHHHhcCC-cEEEEEEcCCCc--cccCHHHHHHHHH-HcCCCcceE--ECCchhHHHH------------h
Confidence 46899999999999987 999999987432 1236889999995 789999998 6665543331 5
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
++.++|++||||++|+++.++.|..+.+++.+.|+++|+++
T Consensus 107 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 107 --ENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAET 147 (148)
T ss_dssp --CCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTTC
T ss_pred --CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhcc
Confidence 48889999999999999999999999999999999998764
No 24
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.70 E-value=1.1e-16 Score=107.03 Aligned_cols=83 Identities=14% Similarity=0.250 Sum_probs=69.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++|++||+|++| +.+.+++|++ +++++||++ .|.++..... |
T Consensus 46 ~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 102 (161)
T 3drn_A 46 TREASAFRDNWDLLKDYDVVVIGVSSD--------DINSHKRFKE-KYKLPFILV--SDPDKKIREL------------Y 102 (161)
T ss_dssp HHHHHHHHHTHHHHHTTCEEEEEEESC--------CHHHHHHHHH-HTTCCSEEE--ECTTSHHHHH------------T
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCC--------CHHHHHHHHH-HhCCCceEE--ECCcHHHHHH------------c
Confidence 478999999999999999999999974 5889999995 789999999 6765544331 4
Q ss_pred CCCccc----ceeeEEECCCCcEEEEEcCCCC
Q 033221 83 GDDIQW----NFAKFLVDKNGQVVDRYYPTTS 110 (125)
Q Consensus 83 g~~i~~----~PttflId~~G~v~~~~~G~~~ 110 (125)
++.+ +|++||||++|+|++++.|...
T Consensus 103 --~v~~~~~~~P~~~lid~~G~i~~~~~g~~~ 132 (161)
T 3drn_A 103 --GAKGFILPARITFVIDKKGIIRHIYNSQMN 132 (161)
T ss_dssp --TCCCSSSCCCEEEEECTTSBEEEEEECSSC
T ss_pred --CCCCcCcccceEEEECCCCEEEEEEecCCC
Confidence 3555 8999999999999999999544
No 25
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.70 E-value=2.3e-17 Score=110.52 Aligned_cols=105 Identities=19% Similarity=0.228 Sum_probs=70.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..|||.|++++++|+++|++|++|+.| +++.+++|++ +++++||++ .|.++..++. |+.... ..+..
T Consensus 47 ~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~~~~~~~~~~-~~~~~~p~l--~D~~~~v~~~-ygv~~~-~~~~~ 113 (157)
T 4g2e_A 47 TKEMCTFRDSMAKFNQVNAVVLGISVD--------PPFSNKAFKE-HNKLNFTIL--SDYNREVVKK-YNVAWE-FPALP 113 (157)
T ss_dssp -----CCSCGGGGGGGCSSEEEEEESS--------CHHHHHHHHH-HTTCCSEEE--ECTTSHHHHH-TTCEEE-CTTST
T ss_pred ccchhhcccccccccccCceEeeeccc--------chhHHHHHHH-HcCCcEEEE--EcCCcHHHHH-cCCccc-cccCC
Confidence 579999999999999999999999964 5888999995 789999999 6887765442 110000 00011
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCC-----CChhHHHHHHHHh
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPT-----TSLLSLEHDIKKL 121 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~-----~~~~~l~~~I~~l 121 (125)
| .....|+|||||++|+|++++.|. .+.+++.+.|+.|
T Consensus 114 ~-~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 114 G-YVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp T-CEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred C-cceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 1 123569999999999999998653 2345566666543
No 26
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.70 E-value=8.1e-17 Score=109.90 Aligned_cols=104 Identities=19% Similarity=0.255 Sum_probs=82.6
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++ ++||+|+++....++.++.+.+++|++ +++++||++ .|.++..... |
T Consensus 49 ~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 112 (188)
T 2cvb_A 49 KGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAE-EHGIFFPYL--LDETQEVAKA------------Y 112 (188)
T ss_dssp HTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHH-HHTCCSCEE--ECSSSHHHHH------------T
T ss_pred HHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHH-HhCCCceEE--ECCcchHHHH------------c
Confidence 46899999999999998 999999987432222357889999995 689999999 6766544332 5
Q ss_pred CCCcccceeeEEECCCCcEEEEE--------cCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRY--------YPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~--------~G~~~~~~l~~~I~~ll~~ 124 (125)
++..+|++||||++|+|+++. .|..+.++|.+.|++++++
T Consensus 113 --~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 113 --RALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp --TCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred --CCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 478899999999999999982 2334678999999999864
No 27
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.70 E-value=1.3e-16 Score=106.45 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=74.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..|+|.|++++++|+++|++||+|++| +++.+++|++ +++++||++ .|.++..... |
T Consensus 52 ~~~~~~l~~~~~~~~~~~~~vv~vs~d--------~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 108 (163)
T 3gkn_A 52 TTEGLDFNALLPEFDKAGAKILGVSRD--------SVKSHDNFCA-KQGFAFPLV--SDGDEALCRA------------F 108 (163)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHHH-HHCCSSCEE--ECTTCHHHHH------------T
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHH-HhCCCceEE--ECCcHHHHHH------------h
Confidence 478999999999999999999999974 5889999995 689999999 6766654432 4
Q ss_pred CCCccc------------ceeeEEECCCCcEEEEEcCCCCh---hHHHHHHHHhhc
Q 033221 83 GDDIQW------------NFAKFLVDKNGQVVDRYYPTTSL---LSLEHDIKKLLG 123 (125)
Q Consensus 83 g~~i~~------------~PttflId~~G~v~~~~~G~~~~---~~l~~~I~~ll~ 123 (125)
| +.. +|++||||++|+|++++.+.... +++.+.|+++.+
T Consensus 109 ~--v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l~~ 162 (163)
T 3gkn_A 109 D--VIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAHAK 162 (163)
T ss_dssp T--CEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHHCC
T ss_pred C--CccccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHHhc
Confidence 2 333 89999999999999999654433 344555555443
No 28
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.69 E-value=2e-16 Score=105.26 Aligned_cols=103 Identities=13% Similarity=0.088 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc-cceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~-fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++|+++++.||+|++++... .++.+.+++|++ +++++ ||+. .|.++.....
T Consensus 54 ~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~------------ 116 (164)
T 2h30_A 54 LSELGQAEKWAQDAKFSSANLITVASPGFLH--EKKDGEFQKWYA-GLNYPKLPVV--TDNGGTIAQN------------ 116 (164)
T ss_dssp HHHHHHHHHHHTCGGGTTSEEEEEECTTSTT--CCCTTHHHHHHT-TSCCTTSCEE--ECTTCHHHHH------------
T ss_pred HHHHHHHHHHHHHcccCCcEEEEEEcCCCcc--ccCHHHHHHHHH-hCCCCcceEE--EcCchHHHHH------------
Confidence 4689999999999999999999999875322 235778999994 67888 8988 5655443331
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| +|.++|++||||++|+++.++.|..+.++|.+.|++++++
T Consensus 117 ~--~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 117 L--NISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp T--TCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred c--CCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5 5888999999999999999999999999999999998764
No 29
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=2.4e-16 Score=103.70 Aligned_cols=99 Identities=16% Similarity=0.283 Sum_probs=83.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+.+ .++.+.+++|++ +++++||++ .|.+..... .|
T Consensus 44 ~~~~~~l~~l~~~~~~~~~~vv~v~~~------~~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~------------~~ 102 (153)
T 2l5o_A 44 VSEMPKIIKTANDYKNKNFQVLAVAQP------IDPIESVRQYVK-DYGLPFTVM--YDADKAVGQ------------AF 102 (153)
T ss_dssp HHHHHHHHHHHHHGGGTTEEEEEEECT------TSCHHHHHHHHH-HTTCCSEEE--ECSSCHHHH------------HH
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEecC------CCCHHHHHHHHH-HcCCCceEE--cCchHHHHH------------Hc
Confidence 468999999999999999999999975 346889999995 789999998 565443322 14
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++|++||||++|+|+.++.|..+.+.|.+.|+++|..
T Consensus 103 --~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 103 --GTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp --TCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred --CCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4788999999999999999999999999999999999864
No 30
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.68 E-value=3e-16 Score=107.05 Aligned_cols=106 Identities=14% Similarity=0.271 Sum_probs=72.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..|||.|++++++|+++|++||+|+.| +.+.+++|++ +++++||++ .|.++..+.. |..... ...+
T Consensus 68 ~~el~~l~~l~~~~~~~~~~vv~Vs~D--------~~~~~~~~~~-~~~~~f~~l--~D~~~~~~~~-~gv~~~--~~~~ 133 (179)
T 3ixr_A 68 STEGLEFNLLLPQFEQINATVLGVSRD--------SVKSHDSFCA-KQGFTFPLV--SDSDAILCKA-FDVIKE--KTMY 133 (179)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEESC--------CHHHHHHHHH-HHTCCSCEE--ECTTCHHHHH-TTCEEE--ECCC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHH-HcCCceEEE--ECCchHHHHH-cCCccc--cccc
Confidence 479999999999999999999999964 5788999995 789999999 6776654442 110000 0000
Q ss_pred CC-CcccceeeEEECCCCcEEEEEcCCCChh---HHHHHHHHhh
Q 033221 83 GD-DIQWNFAKFLVDKNGQVVDRYYPTTSLL---SLEHDIKKLL 122 (125)
Q Consensus 83 g~-~i~~~PttflId~~G~v~~~~~G~~~~~---~l~~~I~~ll 122 (125)
|. .....|++||||++|+|++++.+..... ++.+.|+++.
T Consensus 134 g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 134 GRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp --CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHHH
T ss_pred CcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHHh
Confidence 00 0013699999999999999996544333 4445555543
No 31
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.68 E-value=1.2e-17 Score=112.78 Aligned_cols=99 Identities=16% Similarity=0.225 Sum_probs=76.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..|+|.|++++++|+++|++|+||+.| +++.+++|++ +++++||++ .|.++..++. |
T Consensus 50 ~~e~~~l~~~~~~~~~~~v~vv~is~d--------~~~~~~~~~~-~~~~~fp~l--~D~~~~v~~~------------y 106 (164)
T 4gqc_A 50 TKELCTFRDKMAQLEKANAEVLAISVD--------SPWCLKKFKD-ENRLAFNLL--SDYNREVIKL------------Y 106 (164)
T ss_dssp CSSCEESCCCGGGGGGSSSEEEEEESS--------CHHHHHHHHH-HTTCCSEEE--ECTTSHHHHH------------T
T ss_pred ccchhhhhhhHHHhhccCceEEEecCC--------CHHHHHHHHH-hcCccccee--ecCchHHHHH------------c
Confidence 368999999999999999999999963 5888999994 789999999 6887765542 4
Q ss_pred CC--------CcccceeeEEECCCCcEEEEEcCCC-----ChhHHHHHHHHhhcc
Q 033221 83 GD--------DIQWNFAKFLVDKNGQVVDRYYPTT-----SLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~--------~i~~~PttflId~~G~v~~~~~G~~-----~~~~l~~~I~~ll~~ 124 (125)
|. .....|+|||||++|+|++++.+.. +.+++.+.+++++++
T Consensus 107 gv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 107 NVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp TCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 31 1124689999999999999986532 455666777776653
No 32
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=1.4e-16 Score=119.61 Aligned_cols=103 Identities=18% Similarity=0.275 Sum_probs=85.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.||+|+++.+.. .++.+.+++|++ +++++||++ .|.+..... .|
T Consensus 98 ~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~--~d~~~~~~~~~~-~~~l~fpv~--~D~~~~l~~------------~y 160 (352)
T 2hyx_A 98 QRAIPHVVGWYQAYKDSGLAVIGVHTPEYAF--EKVPGNVAKGAA-NLGISYPIA--LDNNYATWT------------NY 160 (352)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCSSGG--GGCHHHHHHHHH-HHTCCSCEE--ECTTSHHHH------------HT
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECCcccc--cCCHHHHHHHHH-HcCCCccEE--eCCcHHHHH------------Hc
Confidence 4689999999999999899999999874322 236889999995 789999999 676544322 15
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++|++||||++|+|+.++.|..+.+++++.|+++|++
T Consensus 161 --gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 161 --RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp --TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred --CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 5888999999999999999999999999999999998854
No 33
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.68 E-value=3.4e-16 Score=104.10 Aligned_cols=104 Identities=13% Similarity=0.232 Sum_probs=81.4
Q ss_pred hhhHHHHHHHHHHhcc----CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCC
Q 033221 3 NSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~----~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
..++|.|++++++|++ ++++||+|++| .+.++++.+++|++ +++++||++. . .. .... .+.+
T Consensus 40 ~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~~~~~~~~-~~~~~~~~l~--~---~~-d~~~-~~~~-- 105 (164)
T 2ggt_A 40 PEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKEAIANYVK-EFSPKLVGLT--G---TR-EEVD-QVAR-- 105 (164)
T ss_dssp HHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHHHHHHHHH-TTCSSCEEEE--C---CH-HHHH-HHHH--
T ss_pred HHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHHHHHHHHH-HcCCCeEEEe--C---CH-HHHH-HHHH--
Confidence 5789999999999987 48999999987 23457899999995 7899999983 1 10 0011 1112
Q ss_pred CCCCCCCcccce---------------eeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 79 WGIFGDDIQWNF---------------AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 79 ~~~~g~~i~~~P---------------ttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
.| ++...| ++||||++|+|+.++.|..++++|.+.|+++|++
T Consensus 106 --~~--~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 162 (164)
T 2ggt_A 106 --AY--RVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRP 162 (164)
T ss_dssp --TT--TCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHGG
T ss_pred --hc--CeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 25 366667 9999999999999999999999999999999875
No 34
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.66 E-value=5.1e-16 Score=101.09 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=75.9
Q ss_pred hhhHHHHHH---HHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCC
Q 033221 3 NSNYIELSQ---LYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e~p~l~~---l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~ 79 (125)
..++|.|.+ ++++|+++++.||+|+++ ++.+.+++|+ ++++++||++ .|.++.... ..
T Consensus 43 ~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d-------~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~------~~--- 103 (142)
T 3ewl_A 43 RKFEKLFAEIPAFVEMVENGTLRVLAIYPD-------ENREEWATKA-VYMPQGWIVG--WNKAGDIRT------RQ--- 103 (142)
T ss_dssp HHHHHHHHTCHHHHHHHHHTSEEEEEEECS-------SCHHHHHHHH-TTSCTTCEEE--ECTTCHHHH------TT---
T ss_pred HHHHHHHHHhHHHHHHhccCCeEEEEEEec-------CCHHHHHHHH-HHcCCCccee--eCCccchhh------HH---
Confidence 468899988 999999999999999985 2578899999 5789999999 677654321 00
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
.| ++.++|++||||++|+|+. +..+.+++++.|+++.+
T Consensus 104 -~~--~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 104 -LY--DIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp -CS--CCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC---
T ss_pred -Hc--CCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHcc
Confidence 25 5889999999999999988 45778899998887754
No 35
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.66 E-value=5.7e-16 Score=108.48 Aligned_cols=95 Identities=12% Similarity=0.207 Sum_probs=75.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|||.|++++++|+++|++||||++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 65 ~~e~~~l~~l~~~~~~~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~~------ 127 (211)
T 2pn8_A 65 PTEIIAFGDRLEEFRSINTEVVACSVD--------SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQISKD------ 127 (211)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HhhhccCccCCceEEE--ECCchHHHHH------
Confidence 469999999999999999999999974 5778899994 66 7899999 6765544332
Q ss_pred hCCCCCCCCCc------ccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDI------QWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i------~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
|| + ..+|++||||++|+|++++.|.. +.+++.+.|+.+.
T Consensus 128 ------yg--v~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 128 ------YG--VYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp ------TT--CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ------cC--CcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 53 3 25899999999999999997754 3467777777764
No 36
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.66 E-value=4.8e-16 Score=105.76 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=80.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++|+++++.|++|+++. ++.+.+++|++ ++++ +||++ .|.++.... .+...
T Consensus 76 ~~~~~~l~~l~~~~~~~~~~vv~v~~d~------~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~----~~~~~---- 138 (186)
T 1jfu_A 76 RKEMPALDELQGKLSGPNFEVVAINIDT------RDPEKPKTFLK-EANLTRLGYF--NDQKAKVFQ----DLKAI---- 138 (186)
T ss_dssp HHHHHHHHHHHHHHCBTTEEEEEEECCC------SCTTHHHHHHH-HTTCCTTCCE--ECTTCHHHH----HHHTT----
T ss_pred HHHHHHHHHHHHHhccCCcEEEEEECCC------CCHHHHHHHHH-HcCCCCCceE--ECCcchHHH----Hhccc----
Confidence 4689999999999998899999999862 24567899995 7899 59999 676544322 22210
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCC--hhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTS--LLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~--~~~l~~~I~~ll~~ 124 (125)
+ .+.++|++||||++|+|+.++.|..+ .+++.+.|+++|++
T Consensus 139 ~--~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 139 G--RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp T--CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred c--ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 1 23468999999999999999999875 67899999999876
No 37
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.66 E-value=5.6e-16 Score=109.40 Aligned_cols=95 Identities=17% Similarity=0.288 Sum_probs=76.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|+|.|++++++|+++|++||+|++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 73 ~~e~p~l~~l~~~~~~~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~~------ 135 (221)
T 2c0d_A 73 PTEIIEFNKHIKDFENKNVELLGISVD--------SVYSHLAWKN-MPIEKGGIGNVEFTLV--SDINKDISKN------ 135 (221)
T ss_dssp HHHHHHHHHTHHHHHHTTEEEEEEESS--------CHHHHHHHHH-SCGGGTCCCSCSSEEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHH-HhhhhcCccCCceEEE--ECCchHHHHH------
Confidence 579999999999999999999999974 4778899995 67 7899999 6765544332
Q ss_pred hCCCCCCCCCc-----ccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDI-----QWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i-----~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
|| + ..+|++||||++|+|++++.|.. +.+++.+.|+++.
T Consensus 136 ------yg--v~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 136 ------YN--VLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp ------TT--CEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred ------cC--CcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 53 4 36799999999999999987753 4567777887765
No 38
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.66 E-value=1.5e-15 Score=99.79 Aligned_cols=98 Identities=22% Similarity=0.397 Sum_probs=80.9
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++|+.|++|+++. +.+.+++|++ +++++||++ .|.++..... |
T Consensus 44 ~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 101 (152)
T 3gl3_A 44 RQSFPWMNQMQAKYKAKGFQVVAVNLDA-------KTGDAMKFLA-QVPAEFTVA--FDPKGQTPRL------------Y 101 (152)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECCS-------SHHHHHHHHH-HSCCCSEEE--ECTTCHHHHH------------T
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEECCC-------CHHHHHHHHH-HcCCCCcee--ECCcchhHHH------------c
Confidence 4689999999999999999999999862 4788999995 789999999 6766543331 5
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCCh--hHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSL--LSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~--~~l~~~I~~ll~~ 124 (125)
++.++|++||||++|+|+.++.|.... +.|++.|++++..
T Consensus 102 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 102 --GVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp --TCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred --CCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 478899999999999999999997544 7899999988754
No 39
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.66 E-value=7.3e-16 Score=100.06 Aligned_cols=95 Identities=17% Similarity=0.295 Sum_probs=79.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|++.++.|++|+++. +.++.+.+++|++ +++++||++ .|.++..... |
T Consensus 50 ~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 110 (145)
T 3erw_A 50 KKELPQFQSFYDAHPSDSVKLVTVNLVN----SEQNQQVVEDFIK-ANKLTFPIV--LDSKGELMKE------------Y 110 (145)
T ss_dssp HHHHHHHHHHHHHCCCSSEEEEEEECGG----GSSCHHHHHHHHH-HTTCCSCEE--ECSSSHHHHH------------T
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEccC----CcCCHHHHHHHHH-HcCCceeEE--EcCchhHHHh------------c
Confidence 4689999999999998889999999862 2246899999995 789999999 6765543331 5
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
++.++|++||||++|+|+.++.|..+.++|.+.|
T Consensus 111 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 111 --HIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp --TCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred --CcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 5888999999999999999999999998888765
No 40
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.65 E-value=9.2e-16 Score=101.94 Aligned_cols=103 Identities=16% Similarity=0.275 Sum_probs=82.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+++ ++.+.+++|++ +++++||++ .|.. . +...+... +
T Consensus 50 ~~~~~~l~~l~~~~~~~~v~~v~v~~d-------~~~~~~~~~~~-~~~~~~~~~--~~~~-~----~~~~~~~~----~ 110 (165)
T 3or5_A 50 RSEIPDMVQVQKTWASRGFTFVGIAVN-------EQLPNVKNYMK-TQGIIYPVM--MATP-E----LIRAFNGY----I 110 (165)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEECS-------CCHHHHHHHHH-HHTCCSCEE--ECCH-H----HHHHHHTT----S
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHHHHHHHH-HcCCCCceE--ecCH-H----HHHHHhhh----h
Confidence 468999999999999999999999985 24788999995 689999999 4532 2 22222111 1
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
..++.++|++||||++|+|+.++.|..+.+++.+.|+++|++
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 114778899999999999999999999999999999999875
No 41
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.65 E-value=7.3e-16 Score=108.06 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=77.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|+|.|++++++|+++|++||+|++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 69 ~~~~~~l~~l~~~~~~~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~~~------ 131 (213)
T 2i81_A 69 PSEIIALDKALDAFHERNVELLGCSVD--------SKYTHLAWKK-TPLAKGGIGNIKHTLL--SDITKSISKD------ 131 (213)
T ss_dssp HHHHHHHHHTHHHHHHTTEEEEEEESS--------CHHHHHHHHS-SCGGGTCCCSCSSEEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHH-HHHhhCCccCCCceEE--ECCchHHHHH------
Confidence 478999999999999999999999974 5788999994 67 8899999 6765544432
Q ss_pred hCCCCCCCCCcc-----cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDIQ-----WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i~-----~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~ll 122 (125)
| ++. .+|++||||++|+|++++.|... .+++.+.|++++
T Consensus 132 ------y--gv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 132 ------Y--NVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp ------T--TCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred ------h--CCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 5 366 78999999999999999877653 677888887765
No 42
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.64 E-value=8.9e-16 Score=101.06 Aligned_cols=99 Identities=10% Similarity=0.217 Sum_probs=79.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+++ .++.+.+++|++ +++++||++ .|.++..... |
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~~v~v~~d------~~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 102 (154)
T 3kcm_A 44 REEIPSMMRLNAAMAGKPFRMLCVSID------EGGKVAVEEFFR-KTGFTLPVL--LDADKRVGKL------------Y 102 (154)
T ss_dssp HHHHHHHHHHHHHTTTSSEEEEEEECC------TTHHHHHHHHHH-HHCCCCCEE--ECTTCHHHHH------------H
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEEcC------CcchHHHHHHHH-HcCCCeeEE--ecCchHHHHH------------h
Confidence 468999999999999989999999986 234788999995 689999999 6765543331 4
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCC--ChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~--~~~~l~~~I~~ll~~ 124 (125)
++.++|++||||++|+|+.++.|.. +.+++.+.|+++..+
T Consensus 103 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 103 --GTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp --TCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred --CCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 4788999999999999999999987 566899999887654
No 43
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=102.06 Aligned_cols=104 Identities=13% Similarity=0.239 Sum_probs=79.5
Q ss_pred hhhHHHHHHHHHHhcc----CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCC
Q 033221 3 NSNYIELSQLYDKYKD----QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~----~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
..++|.|++++++|++ ++++||+|++| .+.++++.+++|++ +++++||++. +... ....+.+
T Consensus 43 ~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~~~~~~-~~~~~~~~l~--~~~~-~~~~~~~------ 108 (171)
T 2rli_A 43 PDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAMARYVQ-DFHPRLLGLT--GSTK-QVAQASH------ 108 (171)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHHHHHHH-TTCTTCCEEE--CCHH-HHHHHHH------
T ss_pred HHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHHHHHHH-HcCCCeEEEe--CCHH-HHHHHHH------
Confidence 5789999999999975 58999999986 23457899999995 7899999983 3211 0011111
Q ss_pred CCCCCCCcccce---------------eeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 79 WGIFGDDIQWNF---------------AKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 79 ~~~~g~~i~~~P---------------ttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
.|| +...| ++||||++|+|+.++.|..+.++|.+.|+++|++
T Consensus 109 --~~~--v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 109 --SYR--VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp --HSC--CCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred --HhC--eEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 132 44444 9999999999999999999999999999998864
No 44
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.64 E-value=1.8e-15 Score=103.41 Aligned_cols=96 Identities=14% Similarity=0.194 Sum_probs=78.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC----CcccceeEeeccCCCccchHHHHHHhCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~----~~~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
..++|.|++++++|+++++.||+|+.| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 48 ~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~~~--------- 107 (187)
T 1we0_A 48 PTELEDVQKEYAELKKLGVEVYSVSTD--------THFVHKAWHE-NSPAVGSIEYIMI--GDPSQTISRQ--------- 107 (187)
T ss_dssp THHHHHHHHHHHHHHHTTEEEEEEESS--------CHHHHHHHHH-SCHHHHTCCSEEE--ECTTCHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECC--------CHHHHHHHHH-HhccccCCCceEE--ECCchHHHHH---------
Confidence 579999999999999999999999974 4778899995 67 8999999 5755443331
Q ss_pred CCCCCCCcc------cceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhhc
Q 033221 79 WGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLLG 123 (125)
Q Consensus 79 ~~~~g~~i~------~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll~ 123 (125)
| ++. .+|++||||++|+|++++.|.. +.+++.+.|++++.
T Consensus 108 ---~--~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 108 ---F--DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp ---T--TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred ---h--CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 4 355 7899999999999999998875 57788888887753
No 45
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.64 E-value=1.8e-15 Score=98.91 Aligned_cols=94 Identities=17% Similarity=0.327 Sum_probs=73.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCccc-ceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEF-PIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~f-pv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++|++++++||+|+++ .+.+.+++|++ +++++| +++ .|..+.... +.+ .
T Consensus 48 ~~~~~~l~~l~~~~~~~~~~vv~vs~d-------~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~-~~~--------~ 108 (143)
T 4fo5_A 48 RARNVQLANEVNKFGPDKIAMCSISMD-------EKESIFTETVK-IDKLDLSTQF--HEGLGKESE-LYK--------K 108 (143)
T ss_dssp HHHHHHHHHHHTTSCTTTEEEEEEECC-------SCHHHHHHHHH-HHTCCGGGEE--ECTTGGGSH-HHH--------H
T ss_pred HHHHHHHHHHHHHhCcCCEEEEEEEcc-------CCHHHHHHHHH-HhCCCCceee--ecccccchH-HHH--------H
Confidence 478999999999999999999999986 24788999995 689999 777 565443221 211 1
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
| ++.++|++||||++|+|+.++. +.+++++.|++
T Consensus 109 ~--~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 142 (143)
T 4fo5_A 109 Y--DLRKGFKNFLINDEGVIIAANV---TPEKLTEILKA 142 (143)
T ss_dssp T--TGGGCCCEEEECTTSBEEEESC---CHHHHHHHHTC
T ss_pred c--CCCCCCcEEEECCCCEEEEccC---CHHHHHHHHHh
Confidence 5 5889999999999999999974 46777776654
No 46
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.64 E-value=1.4e-15 Score=105.41 Aligned_cols=95 Identities=14% Similarity=0.152 Sum_probs=76.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|+|.|++++++|+++|++||+|++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 53 ~~~~~~l~~l~~~~~~~~v~vi~Is~D--------~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~~------ 115 (202)
T 1uul_A 53 PTEICQFSDRVKEFSDIGCEVLACSMD--------SEYSHLAWTS-IERKRGGLGQMNIPIL--ADKTKCIMKS------ 115 (202)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHH-SCGGGTCCCSCSSCEE--ECTTCHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHHH-HHHhhCCCCCCceeEE--ECCchHHHHH------
Confidence 468999999999999999999999974 4778999995 66 8999999 6765544332
Q ss_pred hCCCCCCCCCcc------cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i~------~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~ll 122 (125)
| ++. .+|++||||++|+|++++.|... .+++.+.|+++.
T Consensus 116 ------y--gv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 ------Y--GVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp ------H--TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ------c--CCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 4 355 78999999999999999987654 467878887765
No 47
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.63 E-value=8.4e-16 Score=106.00 Aligned_cols=95 Identities=16% Similarity=0.269 Sum_probs=78.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhh-------CCcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR-------FKSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~-------~~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..++|.|++++++|+++|++||+|+.| +.+.+++|++ + ++++||++ .|.++.....
T Consensus 50 ~~~~~~l~~l~~~~~~~~v~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~~~~~~~~--~d~~~~~~~~------ 112 (198)
T 1zof_A 50 PTEIIAFDKRVKDFHEKGFNVIGVSID--------SEQVHFAWKN-TPVEKGGIGQVSFPMV--ADITKSISRD------ 112 (198)
T ss_dssp CTHHHHHHHTHHHHHHTTEEEEEEESS--------CHHHHHHHHT-SCGGGTCCCCCSSCEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECC--------CHHHHHHHHH-hhhhcccccCceeEEE--ECCchHHHHH------
Confidence 578999999999999999999999974 4778899994 6 79999999 6765544332
Q ss_pred hCCCCCCCCCcc-----cceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDIQ-----WNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i~-----~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
| ++. .+|++||||++|+|+.++.|.. +.+++.+.|+++.
T Consensus 113 ------~--~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 113 ------Y--DVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp ------T--TCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred ------h--CCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 5 366 7899999999999999998876 4677888888765
No 48
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.63 E-value=1.8e-15 Score=104.21 Aligned_cols=96 Identities=17% Similarity=0.250 Sum_probs=78.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC----CcccceeEeeccCCCccchHHHHHHhCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF----KSEFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~----~~~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
..++|.|++++++|++++++||+|+.+ +.+.+++|++ ++ +++||++ .|.++.....
T Consensus 62 ~~~~~~l~~l~~~~~~~~v~vv~Vs~d--------~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~~~--------- 121 (195)
T 2bmx_A 62 PTEIAAFSKLNDEFEDRDAQILGVSID--------SEFAHFQWRA-QHNDLKTLPFPML--SDIKRELSQA--------- 121 (195)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHH-HCTTGGGCCSCEE--ECTTSHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HhccccCCceeEE--eCCchHHHHH---------
Confidence 579999999999999989999999974 4778999995 67 8999999 5755443331
Q ss_pred CCCCCCCcc-----cceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhhc
Q 033221 79 WGIFGDDIQ-----WNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLLG 123 (125)
Q Consensus 79 ~~~~g~~i~-----~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll~ 123 (125)
| ++. .+|++||||++|+|++++.|.. +.+++.+.|++++.
T Consensus 122 ---~--~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 ---A--GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp ---H--TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred ---h--CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 4 355 7899999999999999998876 57788888888763
No 49
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.63 E-value=1.1e-15 Score=99.66 Aligned_cols=97 Identities=15% Similarity=0.188 Sum_probs=78.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc-cceeEeeccCCC--ccchHHHHHHhCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE-FPIFEKIDVNGE--HASPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~-fpv~~~~D~~g~--~~~~~~~~l~~~~~ 79 (125)
..++|.|++++++|+++|+.|++|+++ ++.+.+++|++ +++++ ||++ .|..+. ...
T Consensus 47 ~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~----------- 105 (148)
T 3hcz_A 47 QQETPKLYDWWLKNRAKGIQVYAANIE-------RKDEEWLKFIR-SKKIGGWLNV--RDSKNHTDFKI----------- 105 (148)
T ss_dssp CSHHHHHHHHHHHHGGGTEEEEEEECC-------SSSHHHHHHHH-HHTCTTSEEE--ECTTCCCCHHH-----------
T ss_pred HHHHHHHHHHHHHhccCCEEEEEEEec-------CCHHHHHHHHH-HcCCCCceEE--eccccchhHHH-----------
Confidence 468999999999999999999999985 24678999995 67998 9999 676664 222
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
.| ++.++|++||||++|+|+.++.|..+.+.+.+.|.++++
T Consensus 106 -~~--~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 106 -TY--DIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp -HH--CCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHHH
T ss_pred -hc--CcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHhc
Confidence 14 478899999999999999999887666666666666654
No 50
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.63 E-value=1.7e-15 Score=99.96 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=76.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+++ ++.+.+++|++ +++++||++ .|..+.. ..+. + .|
T Consensus 45 ~~~~~~l~~l~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~-~~~~~~~~~--~d~~~~~-~~~~----~----~~ 105 (152)
T 2lrn_A 45 RKETPYLLKTYNAFKDKGFTIYGVSTD-------RREEDWKKAIE-EDKSYWNQV--LLQKDDV-KDVL----E----SY 105 (152)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEECC-------SCHHHHHHHHH-HHTCCSEEE--EECHHHH-HHHH----H----HT
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEEcc-------CCHHHHHHHHH-HhCCCCeEE--ecccchh-HHHH----H----Hh
Confidence 568999999999999999999999986 24788999995 679999999 5542100 1111 1 15
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++|++||||++|+|+.++. +.+++++.|++++++
T Consensus 106 --~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 106 --CIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVNG 142 (152)
T ss_dssp --TCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHTS
T ss_pred --CCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHhh
Confidence 4788999999999999999974 567888899888764
No 51
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.63 E-value=1.4e-15 Score=100.17 Aligned_cols=101 Identities=11% Similarity=0.205 Sum_probs=81.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++| ++.|++|+++. .++.+.+++|+ ++++++||++ .|..... ..+ .+ .|
T Consensus 46 ~~~~~~l~~l~~~~---~v~~v~v~~d~-----~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~-~~~----~~----~~ 105 (154)
T 3ia1_A 46 KAEFPGLHRVAEET---GVPFYVISREP-----RDTREVVLEYM-KTYPRFIPLL--ASDRDRP-HEV----AA----RF 105 (154)
T ss_dssp HHHHHHHHHHHHHH---CCCEEEEECCT-----TCCHHHHHHHH-TTCTTEEECB--CCSSCCH-HHH----HT----TS
T ss_pred HHHHHHHHHHHHHc---CCeEEEEeCCC-----cccHHHHHHHH-HHcCCCcccc--cccccch-HHH----HH----Hh
Confidence 46899999999999 69999999851 34689999999 4789999999 5522111 111 11 25
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
++..+|++||||++|+|+.++.|..+.++|++.|++++..+
T Consensus 106 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 106 --KVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp --SBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred --CCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 58889999999999999999999999999999999998754
No 52
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.63 E-value=2.8e-15 Score=96.39 Aligned_cols=94 Identities=16% Similarity=0.251 Sum_probs=78.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+ ++.|++|+++ ++.+.+++|++ +++++||++ .|.++..... |
T Consensus 40 ~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~------------~ 95 (136)
T 1lu4_A 40 NAEAPSLSQVAAANP--AVTFVGIATR-------ADVGAMQSFVS-KYNLNFTNL--NDADGVIWAR------------Y 95 (136)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHHHHHH-HHTCCSEEE--ECTTSHHHHH------------T
T ss_pred HHHHHHHHHHHHHCC--CcEEEEEEcC-------CCHHHHHHHHH-HcCCCceEE--ECCchhHHHh------------c
Confidence 468999999999998 7999999975 25888999995 689999999 5665543331 5
Q ss_pred CCCcccceeeEEECCCCcEEEEEc---CCCChhHHHHHHHHhhc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYY---PTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~---G~~~~~~l~~~I~~ll~ 123 (125)
++.++|++||||++|+|+ ++. |..+.++|.+.|+++|+
T Consensus 96 --~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll~ 136 (136)
T 1lu4_A 96 --NVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALTS 136 (136)
T ss_dssp --TCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC--
T ss_pred --CCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHhC
Confidence 478899999999999999 999 99999999999998763
No 53
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.63 E-value=2.5e-15 Score=105.77 Aligned_cols=95 Identities=13% Similarity=0.174 Sum_probs=76.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|+|.|++++++|+++|++||+|++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 73 ~~~~~~l~~l~~~~~~~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~i~~~------ 135 (220)
T 1zye_A 73 PTEIIAFSDKASEFHDVNCEVVAVSVD--------SHFSHLAWIN-TPRKNGGLGHMNIALL--SDLTKQISRD------ 135 (220)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEEESS--------CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HHHHhCCCcCCceEEE--ECCcHHHHHH------
Confidence 579999999999999999999999975 4678889994 66 7899999 6765544332
Q ss_pred hCCCCCCCCCcc------cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i~------~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~ll 122 (125)
| ++. .+|++||||++|+|++++.|..+ .+++.+.|++++
T Consensus 136 ------y--gv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 136 ------Y--GVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp ------T--TCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred ------h--CCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 5 355 78999999999999999888643 467888887765
No 54
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.62 E-value=4e-15 Score=96.94 Aligned_cols=98 Identities=17% Similarity=0.232 Sum_probs=77.9
Q ss_pred hhhHHHHHHHHHHh-ccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKY-KDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y-~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++| +++|+.|++|+++. +.+.+++|++ +++++||++ .|..+.... +.. .
T Consensus 49 ~~~~~~l~~l~~~~~~~~~~~~v~v~~d~-------~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~--------~ 109 (148)
T 3fkf_A 49 PEANAELKRLNKEYKKNKNFAMLGISLDI-------DREAWETAIK-KDTLSWDQV--CDFTGLSSE-TAK--------Q 109 (148)
T ss_dssp HHHHHHHHHHHHHTTTCTTEEEEEEECCS-------CHHHHHHHHH-HTTCCSEEE--CCSCGGGCH-HHH--------H
T ss_pred HHHhHHHHHHHHHhcCCCCeEEEEEECCC-------CHHHHHHHHH-HcCCCceEE--EccCCcchH-HHH--------h
Confidence 57899999999999 88899999999862 4788999995 789999999 565322211 211 1
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| ++.++|++||||++|+|+.++. +.+.+.+.|+++|++
T Consensus 110 ~--~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 110 Y--AILTLPTNILLSPTGKILARDI---QGEALTGKLKELLKT 147 (148)
T ss_dssp T--TCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC--
T ss_pred c--CCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHcc
Confidence 5 4888999999999999999975 788999999998864
No 55
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.62 E-value=2e-15 Score=103.62 Aligned_cols=95 Identities=20% Similarity=0.226 Sum_probs=76.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..++|.|++++++|+++|++||+|++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 48 ~~~~~~l~~~~~~~~~~~v~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~~~------ 110 (192)
T 2h01_A 48 PSEIIALDKALDSFKERNVELLGCSVD--------SKFTHLAWKK-TPLSQGGIGNIKHTLI--SDISKSIARS------ 110 (192)
T ss_dssp CHHHHHHHHTHHHHHHTTEEEEEEESS--------CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEeC--------CHHHHHHHHH-hHHhhCCccCCCcCeE--ECCcHHHHHH------
Confidence 479999999999999999999999974 4788999994 66 7899999 6765543331
Q ss_pred hCCCCCCCCCcc-----cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDIQ-----WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i~-----~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~ll 122 (125)
| ++. .+|++||||++|+|++++.|... .+++.+.|+++.
T Consensus 111 ------~--gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 111 ------Y--DVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp ------T--TCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred ------h--CCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 5 356 78999999999999999988543 566777777664
No 56
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.62 E-value=1.2e-15 Score=107.40 Aligned_cols=84 Identities=14% Similarity=0.239 Sum_probs=68.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|+|.|++++++|+++|++||+|++| +.+...+|++ .+ +++||++ .|.++.....
T Consensus 86 ~~~~p~l~~l~~~~~~~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~~~------ 148 (222)
T 3ztl_A 86 PTEIIAFSDQVEEFNSRNCQVIACSTD--------SQYSHLAWDN-LDRKSGGLGHMKIPLL--ADRKQEISKA------ 148 (222)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHH-SCGGGTSCCSCSSCEE--ECSSSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HhhhhccccccceeEE--eCCchHHHHH------
Confidence 579999999999999999999999974 4677888984 55 8999999 6766544332
Q ss_pred hCCCCCCCCCcc------cceeeEEECCCCcEEEEEcCCCCh
Q 033221 76 SGKWGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTTSL 111 (125)
Q Consensus 76 ~~~~~~~g~~i~------~~PttflId~~G~v~~~~~G~~~~ 111 (125)
|| +. .+|++||||++|+|++++.|....
T Consensus 149 ------yg--v~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~ 182 (222)
T 3ztl_A 149 ------YG--VFDEEDGNAFRGLFIIDPNGILRQITINDKPV 182 (222)
T ss_dssp ------TT--CBCTTTSSBCEEEEEECTTSEEEEEEEECTTB
T ss_pred ------cC--CeecCCCCccceEEEECCCCeEEEEEecCCCC
Confidence 43 44 689999999999999999887554
No 57
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.62 E-value=1.8e-15 Score=100.82 Aligned_cols=83 Identities=10% Similarity=0.184 Sum_probs=66.6
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..|+|.|++++++|+++| +||+|++| +.+.+++|++ +++++||++ .|.++..... |
T Consensus 52 ~~~~~~l~~~~~~~~~~~-~vv~is~d--------~~~~~~~~~~-~~~~~~~~l--~D~~~~~~~~------------~ 107 (159)
T 2a4v_A 52 TRQASGFRDNYQELKEYA-AVFGLSAD--------SVTSQKKFQS-KQNLPYHLL--SDPKREFIGL------------L 107 (159)
T ss_dssp HHHHHHHHHHHHHHTTTC-EEEEEESC--------CHHHHHHHHH-HHTCSSEEE--ECTTCHHHHH------------H
T ss_pred HHHHHHHHHHHHHHHhCC-cEEEEeCC--------CHHHHHHHHH-HhCCCceEE--ECCccHHHHH------------h
Confidence 479999999999999999 99999964 4788999995 679999999 6766554331 3
Q ss_pred CCCcccce------eeEEECCCCcEEEEEcCCCChh
Q 033221 83 GDDIQWNF------AKFLVDKNGQVVDRYYPTTSLL 112 (125)
Q Consensus 83 g~~i~~~P------ttflId~~G~v~~~~~G~~~~~ 112 (125)
++...| ++||| ++|+|++++.|.....
T Consensus 108 --gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 108 --GAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPEV 140 (159)
T ss_dssp --TCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHHH
T ss_pred --CCcccccCCccceEEEE-cCCEEEEEEccCCccc
Confidence 244445 99999 9999999998876543
No 58
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.62 E-value=1.5e-15 Score=108.44 Aligned_cols=94 Identities=12% Similarity=0.200 Sum_probs=72.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|||.|++++++|+++|++||||++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 94 ~~el~~l~~l~~~~~~~gv~vv~Is~D--------~~~~~~~~~~-~~~~~~~~~~~~fp~l--~D~~~~v~~~------ 156 (240)
T 3qpm_A 94 PTEIIAFSDRVHEFRAINTEVVACSVD--------SQFTHLAWII-TPRKQGGLGPMKIPLL--SDLTHQISKD------ 156 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEESS--------CHHHHHHHHH-SCGGGTCCCSCSSCEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HHHhhcCCCCCceeEE--eCchHHHHHH------
Confidence 469999999999999999999999975 4778889994 55 7999999 6776654442
Q ss_pred hCCCCCCCCCcc------cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHh
Q 033221 76 SGKWGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKL 121 (125)
Q Consensus 76 ~~~~~~~g~~i~------~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~l 121 (125)
|| +. .+|++||||++|+|++++.+..+ .+++.+.|+.+
T Consensus 157 ------yg--v~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 157 ------YG--VYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp ------TT--CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ------hC--CccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 43 33 57999999999999999877543 33444455443
No 59
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.62 E-value=5.8e-15 Score=104.36 Aligned_cols=107 Identities=15% Similarity=0.132 Sum_probs=75.5
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhh----------CCcccceeEeeccCCCccchHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR----------FKSEFPIFEKIDVNGEHASPLYK 72 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~----------~~~~fpv~~~~D~~g~~~~~~~~ 72 (125)
..|+|.|++++++|+++|++||||++| +.+.+++|++ + ++++||++ .|.++..+. .|.
T Consensus 48 ~~el~~l~~l~~~f~~~~v~vi~IS~D--------~~~~~~~~~~-~i~~~~~~~~~~~~~fpil--~D~~~~va~-~yg 115 (224)
T 1prx_A 48 TTELGRAAKLAPEFAKRNVKLIALSID--------SVEDHLAWSK-DINAYNSEEPTEKLPFPII--DDRNRELAI-LLG 115 (224)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEESS--------CHHHHHHHHH-HHHHHTTSCCCSCCSSCEE--ECTTCHHHH-HTT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHH-HHHHhhCcccccCcCccee--ecCchHHHH-HhC
Confidence 479999999999999999999999975 4667788884 3 79999999 677665544 221
Q ss_pred HHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 73 LLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 73 ~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
.+.......-| ....+|++||||++|+|+.++.+.. +.+++.+.|+.+.
T Consensus 116 v~~~~~~~~~g-~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 116 MLDPAEKDEKG-MPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp SSCSCTTCSSS-CCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred CCCcccccCCC-ccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 11000000000 0124799999999999999997654 4567777777764
No 60
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.61 E-value=3.4e-15 Score=99.18 Aligned_cols=94 Identities=13% Similarity=0.185 Sum_probs=72.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeecc--CCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDV--NGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~--~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++++++|++++++||+|++| +.+.+++|++ +++++||++ .|. ++.....
T Consensus 53 ~~~~~~l~~~~~~~~~~~~~vv~is~d--------~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~----------- 110 (160)
T 1xvw_A 53 QGELDQLRDHLPEFENDDSAALAISVG--------PPPTHKIWAT-QSGFTFPLL--SDFWPHGAVSQA----------- 110 (160)
T ss_dssp HHHHHHHHHTGGGTSSSSEEEEEEESC--------CHHHHHHHHH-HHTCCSCEE--ECTTTTTHHHHH-----------
T ss_pred HHHHHHHHHHHHHHHHCCcEEEEEeCC--------CHHHHHHHHH-hcCCCceEE--ecCCcChHHHHH-----------
Confidence 468999999999999889999999974 4788999995 689999999 564 4443321
Q ss_pred CCCCCcc----cce--eeEEECCCCcEEEEEcCCCCh----hHHHHHHHHh
Q 033221 81 IFGDDIQ----WNF--AKFLVDKNGQVVDRYYPTTSL----LSLEHDIKKL 121 (125)
Q Consensus 81 ~~g~~i~----~~P--ttflId~~G~v~~~~~G~~~~----~~l~~~I~~l 121 (125)
| ++. ++| ++||||++|+|+.++.|..+. +++.+.|+++
T Consensus 111 -~--~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 111 -Y--GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp -T--TCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred -c--CCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 4 355 778 999999999999999998653 3344444443
No 61
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.61 E-value=5.7e-15 Score=99.56 Aligned_cols=94 Identities=15% Similarity=0.227 Sum_probs=71.9
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeec-cCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D-~~g~~~~~~~~~l~~~~~~ 80 (125)
..|+|.|++++++| ++++||+|+.| +++.+++|++ ++++ +||++ .| .++.. . .
T Consensus 64 ~~~~~~l~~~~~~~--~~v~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~-~-~---------- 118 (171)
T 2yzh_A 64 ETETKKFNEIMAGM--EGVDVTVVSMD--------LPFAQKRFCE-SFNIQNVTVA--SDFRYRDM-E-K---------- 118 (171)
T ss_dssp HHHHHHHHHHTTTC--TTEEEEEEESS--------CHHHHHHHHH-HTTCCSSEEE--ECTTTCGG-G-G----------
T ss_pred HHHHHHHHHHHHHc--CCceEEEEeCC--------CHHHHHHHHH-HcCCCCeEEe--ecCccCcH-H-H----------
Confidence 46899999999999 68999999974 4778999995 7899 99999 67 55554 3 2
Q ss_pred CCCCCc-------ccceeeEEECCCCcEEEEEcC-----CCChhHHHHHHHHhh
Q 033221 81 IFGDDI-------QWNFAKFLVDKNGQVVDRYYP-----TTSLLSLEHDIKKLL 122 (125)
Q Consensus 81 ~~g~~i-------~~~PttflId~~G~v~~~~~G-----~~~~~~l~~~I~~ll 122 (125)
||... ...|++||||++|+|++++.| ..+.+++.+.|+++|
T Consensus 119 -~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 119 -YGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp -GTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred -hCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 32110 136999999999999999975 234567778887765
No 62
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.61 E-value=8.1e-15 Score=93.95 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=78.5
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++|+ ++.|++|+++ ++.+.+++|++ ++++ +||++ .|.++.... .
T Consensus 41 ~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~------------~ 96 (136)
T 1zzo_A 41 QGEAPVVGQVAASHP--EVTFVGVAGL-------DQVPAMQEFVN-KYPVKTFTQL--ADTDGSVWA------------N 96 (136)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHHHHHH-HTTCTTSEEE--ECTTCHHHH------------H
T ss_pred HHHHHHHHHHHHHcC--CeEEEEEeCC-------CCHHHHHHHHH-HcCCCceEEE--EcCCcHHHH------------H
Confidence 468999999999998 7999999975 35788999995 7899 99999 565544322 1
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| ++.++|+++|||++|+++ ++.|..+.+++.+.|+++|++
T Consensus 97 ~--~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~~ 136 (136)
T 1zzo_A 97 F--GVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTSR 136 (136)
T ss_dssp T--TCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC--
T ss_pred c--CCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhcC
Confidence 5 478899999999999999 999999999999999998864
No 63
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.61 E-value=9.6e-15 Score=95.30 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=72.0
Q ss_pred hhhHHHHHH---HHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCC
Q 033221 3 NSNYIELSQ---LYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e~p~l~~---l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~ 79 (125)
..++|.|++ ++++|++++++||+|+.+ ++.+.+++|++ +++++||.+ .|.++... +.+
T Consensus 47 ~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d-------~~~~~~~~~~~-~~~~~~~~~--~d~~~~~~------~~~--- 107 (142)
T 3eur_A 47 AEMIEGLKASPVINGFTAAKKLKVLSIYPD-------EELDEWKKHRN-DFAKEWTNG--YDKELVIK------NKN--- 107 (142)
T ss_dssp HHHHHHHHHCHHHHHHHHTTSEEEEEEECS-------SCHHHHHHHGG-GSCTTSEEE--ECTTCHHH------HTT---
T ss_pred HHHHHHHhhhHHHHHHhccCCeEEEEEEcC-------CCHHHHHHHHH-hcccccccc--cCccchhh------hhh---
Confidence 478999999 999999999999999975 24788999994 789999998 67654310 001
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHH
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 119 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~ 119 (125)
.| ++.++|++||||++|+|+.+..+ .+++++.|+
T Consensus 108 -~~--~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (142)
T 3eur_A 108 -LY--DLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLA 141 (142)
T ss_dssp -CS--CCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHH
T ss_pred -hc--CCCcCCeEEEECCCCcEEecCCC---HHHHHHHHh
Confidence 25 58889999999999999999864 566666554
No 64
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.60 E-value=4.9e-15 Score=104.52 Aligned_cols=107 Identities=16% Similarity=0.211 Sum_probs=75.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH------hhCCcccceeEeeccCCCccchHHHHHHh
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVC------TRFKSEFPIFEKIDVNGEHASPLYKLLKS 76 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~------~~~~~~fpv~~~~D~~g~~~~~~~~~l~~ 76 (125)
..|||.|++++++|+++|++||||++| +.+.+++|++ .+++++||++ .|.++..+. .|..+..
T Consensus 48 ~~el~~l~~l~~~f~~~~v~vi~vS~D--------~~~~~~~~~~~i~~~~~~~~~~fpil--~D~~~~va~-~ygv~~~ 116 (220)
T 1xcc_A 48 TTELAELGKMHEDFLKLNCKLIGFSCN--------SKESHDKWIEDIKYYGKLNKWEIPIV--CDESRELAN-KLKIMDE 116 (220)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHHHHHHHHTCSCCCCCEE--ECTTSHHHH-HHTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCC--------CHHHHHHHHHHHHHHhcCCCCcceeE--ECchhHHHH-HhCCCCc
Confidence 479999999999999999999999975 3666777774 2579999999 677665544 2211000
Q ss_pred CCCCCCCCC-cccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 77 GKWGIFGDD-IQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 77 ~~~~~~g~~-i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
... .+.+ ...+|++||||++|+|+.++.+.. +.+++.+.|+.+.
T Consensus 117 ~~~--~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 117 QEK--DITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp EEE--CTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ccc--cCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 000 0000 135799999999999999987543 4677777787764
No 65
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.60 E-value=6.1e-15 Score=104.98 Aligned_cols=98 Identities=16% Similarity=0.240 Sum_probs=75.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHh-----hC--CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCT-----RF--KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~-----~~--~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|||.|++++++|+++|++||||++| +.+.+++|++. ++ +++||++ .|.++..+..
T Consensus 46 ~~el~~l~~l~~ef~~~~v~vigIS~D--------~~~~~~~~~~~i~~~~~~~~~~~fpil--~D~~~~va~~------ 109 (233)
T 2v2g_A 46 TTELGRVIQLEGDFKKRGVKLIALSCD--------NVADHKEWSEDVKCLSGVKGDMPYPII--ADETRELAVK------ 109 (233)
T ss_dssp HHHHHHHHHTHHHHHHTTEEEEEEESS--------CHHHHHHHHHHHHHHHTCCSSCSSCEE--ECTTCHHHHH------
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEcCC--------CHHHHHHHHHHHHHhhCcccCCceEEE--ECChHHHHHH------
Confidence 479999999999999999999999975 46778888842 57 8999999 6776655442
Q ss_pred hCCCCCCCCC----------cccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 76 SGKWGIFGDD----------IQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~----------i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
||.. ...+|++||||++|+|+.++.+.. +.+++.+.|+.+.
T Consensus 110 ------ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 110 ------LGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp ------TTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ------hCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 3310 125799999999999999987644 4567777777664
No 66
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.60 E-value=2.8e-15 Score=102.24 Aligned_cols=103 Identities=17% Similarity=0.229 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHhccCCeEEEE-eeCCCCCCCCCCCHHHHHHHHHhhCCcc--cceeEeeccCCCccchHHHHHHhCCC-
Q 033221 4 SNYIELSQLYDKYKDQGLEILA-FPCNQFGEEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKW- 79 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvg-v~~~~~~~~e~~~~~~~~~f~~~~~~~~--fpv~~~~D~~g~~~~~~~~~l~~~~~- 79 (125)
.|||.|++++++|+++|++||| |+.| +.+.+++|++ +++++ ||++ .|.++..+.. |........
T Consensus 62 ~e~p~l~~~~~~~~~~gv~vv~~iS~D--------~~~~~~~f~~-~~~~~~~fp~l--~D~~~~va~~-yGv~~~~~~~ 129 (173)
T 3mng_A 62 THLPGFVEQAEALKAKGVQVVACLSVN--------DAFVTGEWGR-AHKAEGKVRLL--ADPTGAFGKE-TDLLLDDSLV 129 (173)
T ss_dssp THHHHHHHTHHHHHTTTCCEEEEEESS--------CHHHHHHHHH-HTTCTTTCEEE--ECTTCHHHHH-HTCBCCSTTH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEcCC--------CHHHHHHHHH-HhCCCCceEEE--ECCChHHHHH-hCCCcccccc
Confidence 4999999999999999999997 8864 5788999995 78998 9999 7887766552 211000000
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHH
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKK 120 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ 120 (125)
+.+| +....|+||||| +|+|++++.+.. +..+.++.|++
T Consensus 130 ~~~g-~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl~~ 172 (173)
T 3mng_A 130 SIFG-NRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNIISQ 172 (173)
T ss_dssp HHHS-SCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHHHH
T ss_pred cccC-CcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHHHh
Confidence 0011 123569999999 999999998864 34456666554
No 67
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.60 E-value=4.2e-16 Score=104.36 Aligned_cols=109 Identities=15% Similarity=0.231 Sum_probs=80.2
Q ss_pred hhhHHHHHHHHHHhccC---CeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCC-
Q 033221 3 NSNYIELSQLYDKYKDQ---GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGK- 78 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~---g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~- 78 (125)
..++|.|++++++|+++ +++||+|++|. +.++++.+++|++ +++++||++ .|..... ..+.+.+.-..
T Consensus 52 ~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~----~~d~~~~~~~~~~-~~~~~~~~l--~d~~~~~-~~~~~~~gv~~~ 123 (172)
T 2k6v_A 52 PTTLLALKRAYEKLPPKAQERVQVIFVSVDP----ERDPPEVADRYAK-AFHPSFLGL--SGSPEAV-REAAQTFGVFYQ 123 (172)
T ss_dssp HHHHHHHHHHHTTSCHHHHTTEEEEEEESCT----TTCCHHHHHHHHH-HHCTTEEEE--CCCHHHH-HHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHhhhhccCCEEEEEEEECC----CCCCHHHHHHHHH-HhCCCcEEE--eCCHHHH-HHHHHhcCeEEE
Confidence 57899999999999975 79999999872 3467899999995 789999999 4533110 11222111000
Q ss_pred ------CCCCCCCcccceeeEEECCCCcEEEEEcCCC--ChhHHHHHHHHhh
Q 033221 79 ------WGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDIKKLL 122 (125)
Q Consensus 79 ------~~~~g~~i~~~PttflId~~G~v~~~~~G~~--~~~~l~~~I~~ll 122 (125)
.+.| .+.++|++|||| +|+|+.++.|.. +.++|.+.|+++|
T Consensus 124 ~~~~~~~~~~--~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 124 KSQYRGPGEY--LVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp EEEEEETTEE--EEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHCC
T ss_pred eccCCCCCCc--eEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 0012 367889999999 999999999988 8889999998875
No 68
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.60 E-value=5.6e-15 Score=100.29 Aligned_cols=94 Identities=14% Similarity=0.229 Sum_probs=76.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++ |+.||+|+++ ++.+.+++|++ +++++||.+. .|.++..... |
T Consensus 74 ~~~~~~l~~l~~~----~v~vv~vs~~-------d~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~~~------------~ 128 (176)
T 3kh7_A 74 RVEHPELTRLAEQ----GVVIYGINYK-------DDNAAAIKWLN-ELHNPYLLSI-SDADGTLGLD------------L 128 (176)
T ss_dssp HHHHHHHHHHHHT----TCEEEEEEES-------CCHHHHHHHHH-HTTCCCSEEE-EETTCHHHHH------------H
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCC-------CCHHHHHHHHH-HcCCCCceEE-ECCcchHHHH------------c
Confidence 4689999999876 6999999975 35889999995 7899999532 5766544332 4
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++|++||||++|+|++++.|..+.+.+.+.|+++|+
T Consensus 129 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 129 --GVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp --TCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred --CCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 477889999999999999999999999988888877764
No 69
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.59 E-value=5.7e-15 Score=106.31 Aligned_cols=94 Identities=11% Similarity=0.199 Sum_probs=72.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|||.|++++++|+++|++||||++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 108 ~~el~~l~~l~~~~~~~gv~vv~IS~D--------~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~va~~------ 170 (254)
T 3tjj_A 108 PTEIIAFGDRLEEFRSINTEVVACSVD--------SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQISKD------ 170 (254)
T ss_dssp CHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHT-SCGGGTSCCSCSSCEE--ECTTSHHHHH------
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEcCC--------CHHHHHHHHH-HHHHhcCCccccccee--eCcHHHHHHH------
Confidence 479999999999999999999999975 5778899994 55 7999999 6776654442
Q ss_pred hCCCCCCCCCcc------cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHh
Q 033221 76 SGKWGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKL 121 (125)
Q Consensus 76 ~~~~~~~g~~i~------~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~l 121 (125)
|| +. .+|++||||++|+|++++.+... .+++.+.|+.+
T Consensus 171 ------yg--v~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 171 ------YG--VYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp ------HT--CEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred ------cC--CccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 32 22 46999999999999999887443 34455555443
No 70
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.59 E-value=1e-14 Score=100.56 Aligned_cols=95 Identities=14% Similarity=0.219 Sum_probs=75.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..++|.|++++++|+++|++||+|++| +.+.+++|++ ++ +++||++ .|.++..+..
T Consensus 51 ~~~~~~l~~l~~~~~~~~v~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~~~------ 113 (197)
T 1qmv_A 51 PTEIIAFSNRAEDFRKLGCEVLGVSVD--------SQFTHLAWIN-TPRKEGGLGPLNIPLL--ADVTRRLSED------ 113 (197)
T ss_dssp HHHHHHHHHTHHHHHTTTEEEEEEESS--------CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTCHHHHH------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECC--------CHHHHHHHHH-HHHhhCCCCCCceEEE--ECCcHHHHHH------
Confidence 468999999999999999999999975 4677889994 66 8999999 6765544332
Q ss_pred hCCCCCCCCCcc------cceeeEEECCCCcEEEEEcCCCC----hhHHHHHHHHhh
Q 033221 76 SGKWGIFGDDIQ------WNFAKFLVDKNGQVVDRYYPTTS----LLSLEHDIKKLL 122 (125)
Q Consensus 76 ~~~~~~~g~~i~------~~PttflId~~G~v~~~~~G~~~----~~~l~~~I~~ll 122 (125)
|| +. .+|++||||++|+|++++.|..+ .+++.+.|+++.
T Consensus 114 ------~g--v~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 114 ------YG--VLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp ------TT--CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ------cC--CccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 43 44 68999999999999999988654 466777776654
No 71
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.59 E-value=7.1e-15 Score=98.05 Aligned_cols=99 Identities=23% Similarity=0.326 Sum_probs=78.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCC-----------CCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQ-----------FGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPL 70 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~-----------~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~ 70 (125)
..++|.|++++++|+ ++.|++|+++. ++..+.++.+.+++|++ ++++ +||++ .| ++.....
T Consensus 53 ~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~d-~~~~~~~- 125 (165)
T 3ha9_A 53 VYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIA-NYGDPSWIMV--MD-DGSLVEK- 125 (165)
T ss_dssp HHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHH-HHSCTTSEEE--EC-CSHHHHH-
T ss_pred hhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHH-HcCCCCeeEE--eC-hHHHHHH-
Confidence 578999999999998 79999999861 11222357899999995 6799 99999 56 4443331
Q ss_pred HHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCC-ChhHHHHHHHHhhc
Q 033221 71 YKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT-SLLSLEHDIKKLLG 123 (125)
Q Consensus 71 ~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~-~~~~l~~~I~~ll~ 123 (125)
| ++.++|++||||++|+|+. .|.. +.++|++.|+++++
T Consensus 126 -----------~--~v~~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 126 -----------F--NVRSIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp -----------T--TCCSSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC--
T ss_pred -----------h--CCCCceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhc
Confidence 5 5888999999999999999 6888 89999999999875
No 72
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.59 E-value=3.3e-15 Score=100.26 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHHhccCCeE-EEEeeCCCCCCCCCCCHHHHHHHHHhhCCc--ccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 4 SNYIELSQLYDKYKDQGLE-ILAFPCNQFGEEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~-vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~--~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
.|+|.|++++++|+++|++ ||||+.| +++.+++|++ ++++ +||++ .|.++..++.
T Consensus 54 ~e~~~l~~~~~~~~~~~v~~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~~l--~D~~~~~~~~----------- 111 (162)
T 1tp9_A 54 KHVPGFIEKAGELKSKGVTEILCISVN--------DPFVMKAWAK-SYPENKHVKFL--ADGSATYTHA----------- 111 (162)
T ss_dssp THHHHHHHHHHHHHHTTCCCEEEEESS--------CHHHHHHHHH-TCTTCSSEEEE--ECTTSHHHHH-----------
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECC--------CHHHHHHHHH-hcCCCCCeEEE--ECCCchHHHH-----------
Confidence 6999999999999999999 9999964 5788999995 7899 89999 6876654442
Q ss_pred CCCCC---------cccceeeEEECCCCcEEEEEcCC
Q 033221 81 IFGDD---------IQWNFAKFLVDKNGQVVDRYYPT 108 (125)
Q Consensus 81 ~~g~~---------i~~~PttflId~~G~v~~~~~G~ 108 (125)
||.. +...|++|||| +|+|++++.|.
T Consensus 112 -~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 112 -LGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp -TTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred -cCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 4311 12379999999 99999999886
No 73
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.58 E-value=1.4e-14 Score=95.03 Aligned_cols=99 Identities=15% Similarity=0.285 Sum_probs=80.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+++. ..+.+++|++ +++++|+.+. .|.++.... .|
T Consensus 46 ~~~~~~l~~l~~~~~~~~~~~v~v~~d~-------~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~~------------~~ 104 (152)
T 2lja_A 46 RGELPALKELEEKYAGKDIHFVSLSCDK-------NKKAWENMVT-KDQLKGIQLH-MGTDRTFMD------------AY 104 (152)
T ss_dssp GGTHHHHHHHHHHSTTSSEEEEEEECCS-------CHHHHHHHHH-HHTCCSEEEE-CSSCTHHHH------------HT
T ss_pred HHHhHHHHHHHHHhccCCeEEEEEEccC-------cHHHHHHHHH-hcCCCCceee-cCcchhHHH------------Hc
Confidence 5689999999999999899999999862 3678999995 6799875542 454433222 15
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++|++||||++|+|+.++.|..+.++|++.|++++..
T Consensus 105 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 105 --LINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp --TCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred --CcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 4788999999999999999999999999999999998764
No 74
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.58 E-value=1.1e-14 Score=104.74 Aligned_cols=103 Identities=17% Similarity=0.302 Sum_probs=75.5
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHh-----hCCcccceeEeeccCCCccchHHHHHHhC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCT-----RFKSEFPIFEKIDVNGEHASPLYKLLKSG 77 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~-----~~~~~fpv~~~~D~~g~~~~~~~~~l~~~ 77 (125)
..|+|.|++++++|+++|++||||++| +...+.+|++. .++++||++ .|.++..+.. |+.+...
T Consensus 50 ~tEl~~l~~l~~ef~~~gv~VI~VS~D--------s~~~~~~w~~~~~~~~~~~i~fPil--~D~~~~ia~~-ygv~~~~ 118 (249)
T 3a2v_A 50 TTEFVSFARRYEDFQRLGVDLIGLSVD--------SVFSHIKWKEWIERHIGVRIPFPII--ADPQGTVARR-LGLLHAE 118 (249)
T ss_dssp HHHHHHHHHTHHHHHHTTEEEEEEESS--------CHHHHHHHHHHHHHHTCCCCCSCEE--ECTTSHHHHH-HTCCCTT
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEECC--------CHHHHHHHHHHHHHhcCCCCceeEE--ECCchHHHHH-hCCcccc
Confidence 479999999999999999999999975 45666667632 258999999 6776655442 2110000
Q ss_pred CCCCCCCCcccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHhh
Q 033221 78 KWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKLL 122 (125)
Q Consensus 78 ~~~~~g~~i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ll 122 (125)
.++..+|++||||++|+|+.++.|.. +.+++.+.|+.+.
T Consensus 119 ------~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 119 ------SATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp ------CSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ------CCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 01226899999999999999988765 4677888887764
No 75
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.58 E-value=5.4e-15 Score=101.77 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHhccCCeE-EEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc--cceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 5 NYIELSQLYDKYKDQGLE-ILAFPCNQFGEEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 5 e~p~l~~l~~~y~~~g~~-vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~--fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
|||.|++++++|+++|++ ||||+.| +++.+++|++ +++++ ||++ .|.++..+..
T Consensus 76 e~p~l~~~~~~~~~~gv~~vv~Is~d--------~~~~~~~f~~-~~~~~~~fp~l--~D~~~~va~~------------ 132 (184)
T 3uma_A 76 HLPGYLENRDAILARGVDDIAVVAVN--------DLHVMGAWAT-HSGGMGKIHFL--SDWNAAFTKA------------ 132 (184)
T ss_dssp HHHHHHHTHHHHHTTTCCEEEEEESS--------CHHHHHHHHH-HHTCTTTSEEE--ECTTCHHHHH------------
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEECC--------CHHHHHHHHH-HhCCCCceEEE--EcCchHHHHH------------
Confidence 799999999999999999 9999974 4788999995 67999 9999 7887765552
Q ss_pred CCC---------CcccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHH
Q 033221 82 FGD---------DIQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKK 120 (125)
Q Consensus 82 ~g~---------~i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~ 120 (125)
||. ++...|+||||| +|+|++++.+.. +...+++.+++
T Consensus 133 yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 133 IGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp TTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred cCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 431 123468999996 999999998753 34556665554
No 76
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.58 E-value=8.4e-15 Score=98.10 Aligned_cols=91 Identities=8% Similarity=0.053 Sum_probs=68.5
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeec-cCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D-~~g~~~~~~~~~l~~~~~~ 80 (125)
..|+|.|++++++| ++++||+|+.| +.+.+++|++ ++++ +||++ .| .++..+..
T Consensus 59 ~~~~~~l~~~~~~~--~~v~vv~is~d--------~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~~----------- 114 (163)
T 1psq_A 59 STQTRRFNEELAGL--DNTVVLTVSMD--------LPFAQKRWCG-AEGLDNAIML--SDYFDHSFGRD----------- 114 (163)
T ss_dssp HHHHHHHHHHTTTC--TTEEEEEEESS--------CHHHHHHHHH-HHTCTTSEEE--ECTTTCHHHHH-----------
T ss_pred HHHHHHHHHHHHHc--CCcEEEEEECC--------CHHHHHHHHH-hcCCCCcEEe--cCCchhHHHHH-----------
Confidence 46899999999999 68999999964 4788999995 6799 99999 57 55543331
Q ss_pred CCCCCcc------cceeeEEECCCCcEEEEEcCCC---C--hhHHHHHHHH
Q 033221 81 IFGDDIQ------WNFAKFLVDKNGQVVDRYYPTT---S--LLSLEHDIKK 120 (125)
Q Consensus 81 ~~g~~i~------~~PttflId~~G~v~~~~~G~~---~--~~~l~~~I~~ 120 (125)
|| +. ..|++||||++|+|++++.|.. . .+++.+.|++
T Consensus 115 -~g--v~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 115 -YA--LLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp -HT--CBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred -hC--CccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 32 22 2499999999999999998742 1 2455555554
No 77
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.57 E-value=4.6e-14 Score=90.19 Aligned_cols=99 Identities=11% Similarity=0.199 Sum_probs=79.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++++ .++.+++|+++... ..++.+.+++|++ ++++ +||++ .|.++.....
T Consensus 38 ~~~~~~l~~~~~~~~-~~~~~v~i~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~------------ 99 (138)
T 4evm_A 38 LASLPDTDEIAKEAG-DDYVVLTVVSPGHK--GEQSEADFKNWYK-GLDYKNLPVL--VDPSGKLLET------------ 99 (138)
T ss_dssp HHHHHHHHHHHHTCT-TTEEEEEEECTTST--TCCCHHHHHHHHT-TCCCTTCCEE--ECTTCHHHHH------------
T ss_pred HHHHHHHHHHHHHhC-CCcEEEEEEcCCCC--chhhHHHHHHHHh-hcCCCCeeEE--ECcchHHHHH------------
Confidence 468999999999965 46999999764322 2346889999994 7899 99999 6765543331
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
| ++.++|++||||++|+|+.++.|..+.+++.+.|+++
T Consensus 100 ~--~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 Y--GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp T--TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred c--CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 5 4788999999999999999999999999999888775
No 78
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.56 E-value=2.4e-14 Score=94.89 Aligned_cols=88 Identities=22% Similarity=0.326 Sum_probs=68.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++|+.||+|+++. ..+.+++|. . +++||++ .|.++.... +.+ .|
T Consensus 51 ~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~~~~~~~~~-~--~~~~~~~--~d~~~~~~~-~~~--------~~ 109 (152)
T 2lrt_A 51 AAHNLALRELYNKYASQGFEIYQISLDG-------DEHFWKTSA-D--NLPWVCV--RDANGAYSS-YIS--------LY 109 (152)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEECSC-------CHHHHHHHH-T--TCSSEEE--ECSSGGGCH-HHH--------HH
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEEccC-------CHHHHHHHH-h--CCCceEE--ECCCCcchH-HHH--------Hc
Confidence 4689999999999999999999999862 366788888 3 4789999 677665222 111 14
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhH
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLS 113 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~ 113 (125)
++..+|++||||++|+|+.++.|..+.+.
T Consensus 110 --~v~~~P~~~lid~~G~i~~~~~g~~~~e~ 138 (152)
T 2lrt_A 110 --NVTNLPSVFLVNRNNELSARGENIKDLDE 138 (152)
T ss_dssp --TCCSCSEEEEEETTTEEEEETTTCSCHHH
T ss_pred --CcccCceEEEECCCCeEEEecCCHHHHHH
Confidence 47788999999999999999988766544
No 79
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.56 E-value=7.4e-15 Score=102.01 Aligned_cols=92 Identities=10% Similarity=0.117 Sum_probs=70.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeecc-CCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~-~g~~~~~~~~~l~~~~~~ 80 (125)
..|+|.|++++++| +|++||+|+.| +.+.+++|++ ++++ +||++ .|. ++..+..
T Consensus 95 ~~e~~~l~~l~~~~--~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~f~~l--~D~~~~~~~~~----------- 150 (200)
T 3zrd_A 95 AASVRKFNQLAGEL--ENTVVLCISSD--------LPFAQSRFCG-AEGLSNVITL--STLRGADFKQA----------- 150 (200)
T ss_dssp CHHHHHHHHHHHTS--TTEEEEEEESS--------CHHHHTTCTT-TTTCTTEEEE--ETTSCTHHHHH-----------
T ss_pred HHHHHHHHHHHHHh--CCCEEEEEECC--------CHHHHHHHHH-HcCCCCceEE--ecCchHHHHHH-----------
Confidence 57999999999999 68999999964 5788999994 7899 99999 676 5544331
Q ss_pred CCCCCcc---------cceeeEEECCCCcEEEEEcCCC--ChhHHHHHHHHh
Q 033221 81 IFGDDIQ---------WNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDIKKL 121 (125)
Q Consensus 81 ~~g~~i~---------~~PttflId~~G~v~~~~~G~~--~~~~l~~~I~~l 121 (125)
|| +. +.|++||||++|+|++++.+.. +..++++.|+.+
T Consensus 151 -yg--v~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~L 199 (200)
T 3zrd_A 151 -YG--VAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAAL 199 (200)
T ss_dssp -TT--CEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHHH
T ss_pred -hC--ceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCCHHHHHHhh
Confidence 32 22 4699999999999999987642 233566555543
No 80
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.55 E-value=2.1e-14 Score=97.23 Aligned_cols=81 Identities=9% Similarity=0.136 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHhccCCe-EEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc--cceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 5 NYIELSQLYDKYKDQGL-EILAFPCNQFGEEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 5 e~p~l~~l~~~y~~~g~-~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~--fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
|+|.|++++++|+++|+ +||||+.| +.+.+++|++ +++++ ||++ .|.++..+..
T Consensus 51 e~p~l~~~~~~~~~~gv~~vv~Is~d--------~~~~~~~~~~-~~~~~~~fp~l--~D~~~~~~~~------------ 107 (167)
T 2wfc_A 51 HLPGYVEQAAAIHGKGVDIIACMAVN--------DSFVMDAWGK-AHGADDKVQML--ADPGGAFTKA------------ 107 (167)
T ss_dssp HHHHHHHTHHHHHHTTCCEEEEEESS--------CHHHHHHHHH-HTTCTTTSEEE--ECTTSHHHHH------------
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeCC--------CHHHHHHHHH-hcCCCcceEEE--ECCCCcHHHH------------
Confidence 99999999999999999 99999964 4788999995 78999 9999 6876665442
Q ss_pred CCCC---------cccceeeEEECCCCcEEEEEcCCC
Q 033221 82 FGDD---------IQWNFAKFLVDKNGQVVDRYYPTT 109 (125)
Q Consensus 82 ~g~~---------i~~~PttflId~~G~v~~~~~G~~ 109 (125)
||.. ....|+|||| ++|+|++++.+..
T Consensus 108 ~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 108 VDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp TTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECTT
T ss_pred cCCccccccccCcccceEEEEEE-eCCEEEEEEecCC
Confidence 4311 1134999999 9999999988753
No 81
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.55 E-value=9.8e-15 Score=98.05 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=67.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeecc-CCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~-~g~~~~~~~~~l~~~~~~ 80 (125)
..|||.|++++++| +|++||+|+.| +.+.+++|++ ++++ +||++ .|. ++..+..
T Consensus 60 ~~e~~~l~~~~~~~--~~v~vv~Is~d--------~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~~----------- 115 (165)
T 1q98_A 60 ATSVRKFNQQAAKL--SNTIVLCISAD--------LPFAQARFCG-AEGIENAKTV--STFRNHALHSQ----------- 115 (165)
T ss_dssp CHHHHHHHHHHHHS--TTEEEEEEESS--------CHHHHTTCTT-TTTCTTEEEE--ECTTCTHHHHH-----------
T ss_pred HHHHHHHHHHHHHc--CCCEEEEEeCC--------CHHHHHHHHH-HcCCCceEEe--eccccchHHHH-----------
Confidence 47999999999999 68999999964 5778899994 7899 79999 575 4433321
Q ss_pred CCCCCcc---------cceeeEEECCCCcEEEEEcCC--CChhHHHHHHHH
Q 033221 81 IFGDDIQ---------WNFAKFLVDKNGQVVDRYYPT--TSLLSLEHDIKK 120 (125)
Q Consensus 81 ~~g~~i~---------~~PttflId~~G~v~~~~~G~--~~~~~l~~~I~~ 120 (125)
|| +. +.|++||||++|+|++++.|. ....++++.++.
T Consensus 116 -~g--v~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~ 163 (165)
T 1q98_A 116 -LG--VDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAV 163 (165)
T ss_dssp -TT--CEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHT
T ss_pred -hC--ceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHh
Confidence 32 22 359999999999999999762 233445555443
No 82
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.55 E-value=1.2e-14 Score=98.58 Aligned_cols=95 Identities=11% Similarity=0.055 Sum_probs=69.7
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++ ++++||+|+.| +.+.+++|++ ++++ +||++ .|.++.....
T Consensus 61 ~~~~~~l~~l~~~---~~v~vv~Is~D--------~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~------------ 114 (175)
T 1xvq_A 61 ATSVRTFDERAAA---SGATVLCVSKD--------LPFAQKRFCG-AEGTENVMPA--SAFRDSFGED------------ 114 (175)
T ss_dssp CHHHHHHHHHHHH---TTCEEEEEESS--------CHHHHTTCC-------CEEEE--ECTTSSHHHH------------
T ss_pred HHHHHHHHHHHhh---cCCEEEEEECC--------CHHHHHHHHH-HcCCCCceEe--eCCHHHHHHH------------
Confidence 4789999999998 67999999974 4778899995 7899 89999 6765544331
Q ss_pred CCCCccc---------ceeeEEECCCCcEEEEEcC--CCChhHHHHHHHHhhccC
Q 033221 82 FGDDIQW---------NFAKFLVDKNGQVVDRYYP--TTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 82 ~g~~i~~---------~PttflId~~G~v~~~~~G--~~~~~~l~~~I~~ll~~~ 125 (125)
|| +.. .|++||||++|+|++++.| ..+..++++.|+.+.++|
T Consensus 115 ~g--v~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 115 YG--VTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp TT--CBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC
T ss_pred hC--CcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhc
Confidence 32 333 3999999999999999974 334557888888887765
No 83
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.55 E-value=2e-14 Score=97.19 Aligned_cols=107 Identities=15% Similarity=0.184 Sum_probs=78.0
Q ss_pred hhhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccce---eEeeccCCCccchHHHHHHhC
Q 033221 3 NSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPI---FEKIDVNGEHASPLYKLLKSG 77 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~--~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv---~~~~D~~g~~~~~~~~~l~~~ 77 (125)
..|+|.|++++++|++ ++++||+|++|. .++++.+++|++ +++++||. +...|. .. .......
T Consensus 45 ~~~~~~l~~~~~~~~~~~~~~~vv~is~d~-----~d~~~~~~~~~~-~~~~~~~~w~~l~~~~~--~~---~~~~~~~- 112 (170)
T 3me7_A 45 PLITKSLLKVIPKLGTPGKDFWVITFTFDP-----KDTLEDIKRFQK-EYGIDGKGWKVVKAKTS--ED---LFKLLDA- 112 (170)
T ss_dssp HHHHHHHHTTHHHHCCBTTTBEEEEEECCT-----TCCHHHHHHHHH-HTTCCSSSEEEEEESSH--HH---HHHHHHH-
T ss_pred HHHHHHHHHHHHHhhhcCCceEEEEEECCC-----CCCHHHHHHHHH-HcCCCCCCeEEEeCCCH--HH---HHHHHHH-
Confidence 4689999999999975 569999999862 367999999995 78988874 210111 11 1111111
Q ss_pred CCCCCC-------CCcccceeeEEECCCCcEEEEEcCC-CChhHHHHHHHHhhccC
Q 033221 78 KWGIFG-------DDIQWNFAKFLVDKNGQVVDRYYPT-TSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 78 ~~~~~g-------~~i~~~PttflId~~G~v~~~~~G~-~~~~~l~~~I~~ll~~~ 125 (125)
|| +.+...|++||||++|+|+.++.|. .+++++.+.|++++.+|
T Consensus 113 ----~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 113 ----IDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp ----TTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCS
T ss_pred ----CCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhccc
Confidence 22 1355679999999999999998886 56889999999998764
No 84
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.54 E-value=1.3e-14 Score=97.45 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=61.5
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeecc-CCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~-~g~~~~~~~~~l~~~~~~ 80 (125)
..|+|.|++++++ +|++||+|+.| +++.+++|++ ++++ +||++ .|. ++..+. .
T Consensus 63 ~~~~~~l~~~~~~---~~~~vv~is~d--------~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~-~---------- 117 (166)
T 3p7x_A 63 DQQTRKFNSDASK---EEGIVLTISAD--------LPFAQKRWCA-SAGLDNVITL--SDHRDLSFGE-N---------- 117 (166)
T ss_dssp HHHHHHHHHHSCT---TTSEEEEEESS--------CHHHHHHHHH-HHTCSSCEEE--ECTTTCHHHH-H----------
T ss_pred HHHHHHHHHHhhc---CCCEEEEEECC--------CHHHHHHHHH-HcCCCceEEc--cCCchhHHHH-H----------
Confidence 4689999999888 68999999964 5888999995 6899 89999 676 554333 1
Q ss_pred CCCCCcc------cceeeEEECCCCcEEEEEcCC
Q 033221 81 IFGDDIQ------WNFAKFLVDKNGQVVDRYYPT 108 (125)
Q Consensus 81 ~~g~~i~------~~PttflId~~G~v~~~~~G~ 108 (125)
|| +. ..|++||||++|+|++++.+.
T Consensus 118 -~g--v~~~~~g~~~p~~~liD~~G~i~~~~~~~ 148 (166)
T 3p7x_A 118 -YG--VVMEELRLLARAVFVLDADNKVVYKEIVS 148 (166)
T ss_dssp -HT--CEETTTTEECCEEEEECTTCBEEEEEECS
T ss_pred -hC--CccccCCceeeEEEEECCCCeEEEEEEcC
Confidence 32 33 279999999999999997643
No 85
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.54 E-value=2.7e-14 Score=101.26 Aligned_cols=92 Identities=24% Similarity=0.231 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHhccCCe-EEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc-cceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 4 SNYIELSQLYDKYKDQGL-EILAFPCNQFGEEEPGSNDQIADFVCTRFKSE-FPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~-~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~-fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
.|||.|++++++|+++|+ +||||+.| +.+.+++|++ +++++ ||++ .|.++..+.. |+.... .+.
T Consensus 52 ~e~~~l~~~~~~~~~~~~~~vv~is~d--------~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~~~-~gv~~~--~~~ 117 (241)
T 1nm3_A 52 SHLPRYNELAPVFKKYGVDDILVVSVN--------DTFVMNAWKE-DEKSENISFI--PDGNGEFTEG-MGMLVG--KED 117 (241)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEESS--------CHHHHHHHHH-HTTCTTSEEE--ECTTSHHHHH-TTCEEE--CTT
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEcC--------CHHHHHHHHH-hcCCCceEEE--ECCCcHHHHH-hCceee--ccc
Confidence 699999999999999999 99999964 4788999995 68997 9999 6877665442 110000 000
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCC
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTS 110 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~ 110 (125)
+|.+....|+|||| ++|+|++++.|...
T Consensus 118 ~g~~~~~~p~t~li-~~G~i~~~~~~~~~ 145 (241)
T 1nm3_A 118 LGFGKRSWRYSMLV-KNGVVEKMFIEPNE 145 (241)
T ss_dssp TTCCEEECCEEEEE-ETTEEEEEEECCSC
T ss_pred ccCcccceeEEEEE-ECCEEEEEEEeccC
Confidence 11111256999999 99999999988643
No 86
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.53 E-value=2.1e-14 Score=96.04 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=75.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++ ++.|++|+++ ++.+.+++|++ +++++||.+. .|.++..... |
T Consensus 67 ~~~~~~l~~l~~~----~v~vv~v~~~-------~~~~~~~~~~~-~~~~~~~~~~-~d~~~~~~~~------------~ 121 (168)
T 2b1k_A 67 RAEHQYLNQLSAQ----GIRVVGMNYK-------DDRQKAISWLK-ELGNPYALSL-FDGDGMLGLD------------L 121 (168)
T ss_dssp HHHHHHHHHHHHT----TCCEEEEEES-------CCHHHHHHHHH-HHCCCCSEEE-EETTCHHHHH------------H
T ss_pred HHHHHHHHHHHHC----CCEEEEEECC-------CChHHHHHHHH-HcCCCCceee-ECcchHHHHH------------c
Confidence 4688999999876 6999999975 25788999995 6899999532 4655443321 4
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++|++||||++|+|+.++.|..+.+.+.+.|++++.
T Consensus 122 --~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 122 --GVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp --TCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred --CccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 478899999999999999999999999998888888765
No 87
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.53 E-value=1.9e-14 Score=96.33 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=72.2
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeec-cCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKID-VNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D-~~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++++++| ++++||+|+.| +.+.+++|++ ++++ +||++ .| .++.....
T Consensus 61 ~~~~~~l~~l~~~~--~~~~vv~is~d--------~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~----------- 116 (167)
T 2jsy_A 61 DAQTRRFNEEAAKL--GDVNVYTISAD--------LPFAQARWCG-ANGIDKVETL--SDHRDMSFGEA----------- 116 (167)
T ss_dssp HHTHHHHHHHHHHH--SSCEEEEEECS--------SGGGTSCCGG-GSSCTTEEEE--EGGGTCHHHHH-----------
T ss_pred HHHHHHHHHHHHHc--CCCEEEEEECC--------CHHHHHHHHH-hcCCCCceEe--eCCchhHHHHH-----------
Confidence 46899999999999 67999999974 3556788994 7899 99999 67 55543331
Q ss_pred CCCCCccc------ceeeEEECCCCcEEEEEcCCC-----ChhHHHHHHHHhhc
Q 033221 81 IFGDDIQW------NFAKFLVDKNGQVVDRYYPTT-----SLLSLEHDIKKLLG 123 (125)
Q Consensus 81 ~~g~~i~~------~PttflId~~G~v~~~~~G~~-----~~~~l~~~I~~ll~ 123 (125)
|| +.. .|++||||++|+|++++.|.. +.+++.+.|+++++
T Consensus 117 -~~--v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~llk 167 (167)
T 2jsy_A 117 -FG--VYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALVK 167 (167)
T ss_dssp -TT--CBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHHC
T ss_pred -hC--CccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhhC
Confidence 42 333 499999999999999997632 34678888888764
No 88
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.52 E-value=2.6e-14 Score=96.96 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=66.5
Q ss_pred hhh-HHHHHHHHHHhccCCeE-EEEeeCCCCCCCCCCCHHHHHHHHHhhCCc--ccceeEeeccCCCccchHHHHHHhCC
Q 033221 3 NSN-YIELSQLYDKYKDQGLE-ILAFPCNQFGEEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGK 78 (125)
Q Consensus 3 ~~e-~p~l~~l~~~y~~~g~~-vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~--~fpv~~~~D~~g~~~~~~~~~l~~~~ 78 (125)
..| ||.|++++++|+++|++ ||||+.+ +.+.+++|++ ++++ +||++ .|.++..+.. |......
T Consensus 60 ~~eh~p~l~~~~~~~~~~g~~~vv~Is~d--------~~~~~~~~~~-~~~~~~~fp~l--~D~~~~~~~~-ygv~~~~- 126 (171)
T 2pwj_A 60 SSKHVPPYKHNIDKFKAKGVDSVICVAIN--------DPYTVNAWAE-KIQAKDAIEFY--GDFDGSFHKS-LELTTDL- 126 (171)
T ss_dssp HHHTHHHHHHTHHHHHHTTCSEEEEEESS--------CHHHHHHHHH-HTTCTTTSEEE--ECTTCHHHHH-HTCEEEC-
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEeCC--------CHHHHHHHHH-HhCCCCceEEE--ECCccHHHHH-hCCcccc-
Confidence 468 99999999999999999 9999974 4778999995 6786 79999 7877765542 2100000
Q ss_pred CCCCCCCcccceeeEEECCCCcEEEEEcCCC
Q 033221 79 WGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 109 (125)
Q Consensus 79 ~~~~g~~i~~~PttflId~~G~v~~~~~G~~ 109 (125)
..+|.+++..|+||||| +|+|++++.|..
T Consensus 127 -~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~ 155 (171)
T 2pwj_A 127 -SAGLLGIRSERWSAYVV-DGKVKALNVEES 155 (171)
T ss_dssp -TTTTCCEEECCEEEEEE-TTEEEEEEECSS
T ss_pred -ccccCCcccceeEEEEE-CCEEEEEEeecC
Confidence 00001123368999999 999999998864
No 89
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.51 E-value=5.3e-14 Score=92.56 Aligned_cols=95 Identities=15% Similarity=0.248 Sum_probs=76.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccc-eeEeeccCCCccchHHHHHHhCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFP-IFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fp-v~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..++|.|++++++ ..+.|++|+++ ++.+.+++|++ +++++|| ++ .|.+......
T Consensus 58 ~~~~~~l~~l~~~---~~v~~v~v~~~-------~~~~~~~~~~~-~~~~~~~~~~--~d~~~~~~~~------------ 112 (156)
T 1kng_A 58 HDEAPLLTELGKD---KRFQLVGINYK-------DAADNARRFLG-RYGNPFGRVG--VDANGRASIE------------ 112 (156)
T ss_dssp HHHHHHHHHHTTC---TTSEEEEEEES-------CCHHHHHHHHH-HHCCCCSEEE--EETTSHHHHH------------
T ss_pred HHHHHHHHHHHhc---CCeEEEEEECC-------CCHHHHHHHHH-HcCCCCceee--eCchhHHHHh------------
Confidence 4678999998876 34999999975 35788999995 6799999 55 5655433221
Q ss_pred CCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| ++.++|++||||++|+++.++.|..+.+.+.+.|+++|++
T Consensus 113 ~--~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 113 W--GVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp T--TCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred c--CcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5 4788999999999999999999999999988888887753
No 90
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.49 E-value=1e-13 Score=95.86 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=75.0
Q ss_pred hhhHHHHHHHHHHhcc---CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCC
Q 033221 3 NSNYIELSQLYDKYKD---QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~---~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~ 79 (125)
..++|.|++++++|++ .+++||+|++| .+.++++.+++|+ ++++.+|+.+. +... ....+.+ .
T Consensus 58 ~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D----~~~d~~~~~~~~~-~~~~~~~~~l~--~~~d-~~~~~~~----~-- 123 (200)
T 2b7k_A 58 PDELDKLGLWLNTLSSKYGITLQPLFITCD----PARDSPAVLKEYL-SDFHPSILGLT--GTFD-EVKNACK----K-- 123 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEEESC----TTTCCHHHHHHHH-TTSCTTCEEEE--CCHH-HHHHHHH----H--
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEEEECC----CCCCCHHHHHHHH-HHcCCCceEEe--CCHH-HHHHHHH----H--
Confidence 4789999999999985 38999999986 2335789999999 47899998873 2100 0011111 1
Q ss_pred CCCCC--------------CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 80 GIFGD--------------DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 80 ~~~g~--------------~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
||. .+...|++||||++|+|+.++.|..+++.+.+.|+++|+
T Consensus 124 --~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 124 --YRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp --TTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred --cCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 220 122446999999999999999998888877777777654
No 91
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=2.1e-15 Score=100.05 Aligned_cols=98 Identities=9% Similarity=0.148 Sum_probs=76.0
Q ss_pred hhhHHHHHH-HHHHhc-cCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQ-LYDKYK-DQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~-l~~~y~-~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++ ++++|+ +.++.|++|++++ +.+.+++|++ +++++||++ .|.++....
T Consensus 49 ~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~-------~~~~~~~~~~-~~~~~~~~~--~d~~~~~~~------------ 106 (159)
T 2ls5_A 49 RKEMPFIEKDIWLKHKDNADFALIGIDRDE-------PLEKVLAFAK-STGVTYPLG--LDPGADIFA------------ 106 (159)
Confidence 468999998 999998 7789999999752 3566889994 789999999 676655443
Q ss_pred CCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
.||..+.++|++||||++|+|+.++.| .+++++++.|+++.+
T Consensus 107 ~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 107 KYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 253234568999999999999999987 466677777776643
No 92
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.49 E-value=1.6e-13 Score=101.73 Aligned_cols=92 Identities=14% Similarity=0.220 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCC
Q 033221 4 SNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFG 83 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g 83 (125)
.|++.|++ ...+|++|||||.| +.+.+++|++ +++++||++ .|.++..+.. ||
T Consensus 42 ~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~~f~~-~~~l~fp~l--~D~~~~v~~~------------yg 94 (322)
T 4eo3_A 42 REAVEFSR----ENFEKAQVVGISRD--------SVEALKRFKE-KNDLKVTLL--SDPEGILHEF------------FN 94 (322)
T ss_dssp HHHHHHHH----SCCTTEEEEEEESC--------CHHHHHHHHH-HHTCCSEEE--ECTTCHHHHH------------TT
T ss_pred HHHHHHHH----HhhCCCEEEEEeCC--------CHHHHHHHHH-hhCCceEEE--EcCchHHHHh------------cC
Confidence 57777754 24458999999964 6889999995 789999999 7888876652 53
Q ss_pred C--CcccceeeEEECCCCcEEEEEcCCCC---hhHHHHHHHHhh
Q 033221 84 D--DIQWNFAKFLVDKNGQVVDRYYPTTS---LLSLEHDIKKLL 122 (125)
Q Consensus 84 ~--~i~~~PttflId~~G~v~~~~~G~~~---~~~l~~~I~~ll 122 (125)
. ....+|+|||||++|+|++++.+.-. .+++.+.|+++.
T Consensus 95 v~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 95 VLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp CEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred CCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 1 11357999999999999999876332 234445555543
No 93
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.47 E-value=1.9e-13 Score=93.57 Aligned_cols=102 Identities=10% Similarity=0.081 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHhccCCe-EEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc--cceeEeeccCCCccchHHHHHHhCCCC
Q 033221 4 SNYIELSQLYDKYKDQGL-EILAFPCNQFGEEEPGSNDQIADFVCTRFKSE--FPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~-~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~--fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
.|+|.|++++++|+++|+ +|+|||.| ++..+++|++ +++++ ||++ .|.++..++ .|..+....
T Consensus 66 ~El~~f~~~~~ef~~~g~d~VigIS~D--------~~~~~~~f~~-~~~l~~~f~lL--sD~~~~va~-ayGv~~~~~-- 131 (176)
T 4f82_A 66 QHVPGYVEHAEQLRAAGIDEIWCVSVN--------DAFVMGAWGR-DLHTAGKVRMM--ADGSAAFTH-ALGLTQDLS-- 131 (176)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEESS--------CHHHHHHHHH-HTTCTTTSEEE--ECTTCHHHH-HHTCEEECG--
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEeCC--------CHHHHHHHHH-HhCCCCCceEE--EcCchHHHH-HhCCCcccc--
Confidence 399999999999999999 99999974 5888999995 78998 9999 687776655 232111100
Q ss_pred CCCCCcccceeeEEECCCCcEEEEEcCCC---ChhHHHHHHHH
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVDRYYPTT---SLLSLEHDIKK 120 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~~~~G~~---~~~~l~~~I~~ 120 (125)
.+|.+++..|++||| ++|+|++++.+.. +....++.++.
T Consensus 132 ~~G~g~~s~R~tfII-~dG~I~~~~~~~~~~~~~~~a~~vL~~ 173 (176)
T 4f82_A 132 ARGMGIRSLRYAMVI-DGGVVKTLAVEAPGKFEVSDAASVLAT 173 (176)
T ss_dssp GGTCCEEECCEEEEE-ETTEEEEEEECCTTCCSSSSHHHHHHT
T ss_pred ccCCCcccccEEEEE-cCCEEEEEEEcCCCCcchhhHHHHHHH
Confidence 022123456999999 9999999998652 22345555544
No 94
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.46 E-value=1.5e-12 Score=88.01 Aligned_cols=113 Identities=15% Similarity=0.327 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHhccC--CeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 4 SNYIELSQLYDKYKDQ--GLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~--g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
.+++.|.++++.++++ .+++|+|++| .+.|+++.+++|+ ++++.+++-+ .-..|.....+.+.........
T Consensus 50 ~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~Dtp~~l~~y~-~~~~~~~~~~--~~ltg~~~~~~~~~~~~~~~~~ 122 (170)
T 4hde_A 50 PMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLDKPENLKAFI-QKFTEDTSNW--NLLTGYSLEDITKFSKDNFQSL 122 (170)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTCCHHHHHHHH-TTTCSCCTTE--EEEBCSCHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhhhcccccceeEeeecC----cccccHHHHHHHH-HHcCCCCCCc--eecCcccHHHHHHHHHhccccc
Confidence 5788888888888655 4899999987 3457899999999 5788877643 1123333222222222111000
Q ss_pred C----CCCcccceeeEEECCCCcEEEEEcCCC--ChhHHHHHHHHhhc
Q 033221 82 F----GDDIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDIKKLLG 123 (125)
Q Consensus 82 ~----g~~i~~~PttflId~~G~v~~~~~G~~--~~~~l~~~I~~ll~ 123 (125)
+ ++.+...|++||||++|+|+.++.|.. +.+.+.+.|++||+
T Consensus 123 ~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Lle 170 (170)
T 4hde_A 123 VDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLAE 170 (170)
T ss_dssp CBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHHC
T ss_pred ccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHhC
Confidence 0 013445589999999999999998743 35678888888764
No 95
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.45 E-value=4.1e-13 Score=94.61 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=73.1
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC-------CcccceeEeeccCCCccchHHHHHH
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF-------KSEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~-------~~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
..|++.|++++++|+++|++|||||+| +...+++|++ .. +++||++ .|.++..++ .|..+.
T Consensus 69 t~E~~~f~~~~~~f~~~g~~vigiS~D--------s~~sh~aw~~-~~~~~~~~~~l~fpll--sD~~~~vak-~YGv~~ 136 (216)
T 3sbc_A 69 PTEIIAFSEAAKKFEEQGAQVLFASTD--------SEYSLLAWTN-IPRKEGGLGPINIPLL--ADTNHSLSR-DYGVLI 136 (216)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEEESS--------CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTSHHHH-HHTCEE
T ss_pred chhhhHHHHhHHhhccCCceEEEeecC--------chhhHHHHHH-HHHHhCCccCcccceE--eCCCCHHHH-HcCCee
Confidence 479999999999999999999999974 6888899984 33 5899999 688887766 333221
Q ss_pred hCCCCCCCCCcccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHh
Q 033221 76 SGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKL 121 (125)
Q Consensus 76 ~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~l 121 (125)
.. . + ...+.+||||++|+|++...-.+ +.+++.+.|+.+
T Consensus 137 ~~----~--g-~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 137 EE----E--G-VALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp TT----T--T-EECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cc----C--C-ceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 11 0 1 24589999999999999775433 344555555544
No 96
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.43 E-value=7.8e-13 Score=93.63 Aligned_cols=91 Identities=11% Similarity=0.068 Sum_probs=66.8
Q ss_pred hhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeecc-CCCccchHHHHHHhCCCCC
Q 033221 4 SNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDV-NGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~-~g~~~~~~~~~l~~~~~~~ 81 (125)
.|+|.|+++ | +|+.|||||.| +++.+++|++ ++++ +||++ .|. ++..+..
T Consensus 71 ~El~~~~~~---~--~gv~VvgIS~D--------s~~~~~~f~~-~~gl~~fplL--sD~~~~~vak~------------ 122 (224)
T 3keb_A 71 RETRRFLDS---W--PHLKLIVITVD--------SPSSLARARH-EHGLPNIALL--STLRGRDFHKR------------ 122 (224)
T ss_dssp HHHHHHHTT---C--TTSEEEEEESS--------CHHHHHHHHH-HHCCTTCEEE--ESTTCTTHHHH------------
T ss_pred HHHHHHHHH---c--CCCEEEEEECC--------CHHHHHHHHH-HcCCCCceEE--EcCCchHHHHH------------
Confidence 688888877 5 68999999964 5888999995 6799 79999 686 4665442
Q ss_pred CCCCc-------ccceeeEEECCCCcEEEEEcCC-----CChhHHHHHHHHhh
Q 033221 82 FGDDI-------QWNFAKFLVDKNGQVVDRYYPT-----TSLLSLEHDIKKLL 122 (125)
Q Consensus 82 ~g~~i-------~~~PttflId~~G~v~~~~~G~-----~~~~~l~~~I~~ll 122 (125)
||... ...|++||||++|+|++++... .+.+++.+.|+.+.
T Consensus 123 yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 123 YGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp TTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred hCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 43111 1269999999999999987642 34566666666654
No 97
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.42 E-value=3.9e-13 Score=89.13 Aligned_cols=91 Identities=15% Similarity=0.244 Sum_probs=71.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
..++|.|++++++|+++++.|++|+++. .+++|+ ++++++||++ .|.++..... |
T Consensus 57 ~~~~~~l~~~~~~~~~~~~~~v~v~~d~----------~~~~~~-~~~~~~~~~~--~d~~~~~~~~------------~ 111 (158)
T 3hdc_A 57 RDEMPSMDRLVKSFPKGDLVVLAVNVEK----------RFPEKY-RRAPVSFNFL--SDATGQVQQR------------Y 111 (158)
T ss_dssp HHHHHHHHHHHHHSSTTSEEEEEEECSS----------SCCGGG-GGCCCSCEEE--ECTTSHHHHH------------T
T ss_pred HHHHHHHHHHHHHcccCCeEEEEEeCCH----------HHHHHH-HHcCCCceEE--ECchHHHHHH------------h
Confidence 4689999999999998899999999751 356788 4789999999 5765543331 5
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChh--HHHHHHHH
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLL--SLEHDIKK 120 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~--~l~~~I~~ 120 (125)
++.++|++||||++|+|+.++.|..+.+ ++.+.+++
T Consensus 112 --~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 112 --GANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp --TCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred --CCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 4788999999999999999999987644 44444443
No 98
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.38 E-value=2.8e-12 Score=90.49 Aligned_cols=101 Identities=16% Similarity=0.178 Sum_probs=72.8
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhh------CCcccceeEeeccCCCccchHHHHHHh
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR------FKSEFPIFEKIDVNGEHASPLYKLLKS 76 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~------~~~~fpv~~~~D~~g~~~~~~~~~l~~ 76 (125)
..|++.|++++++|+++|++|||||+| +....++|+++. .+++||++ .|.++..++ .|..+..
T Consensus 73 t~E~~~f~~~~~eF~~~g~~vigiS~D--------s~~sh~~w~~~~~~~~~~~~l~fpll--sD~~~~va~-~yGv~~~ 141 (219)
T 3tue_A 73 PTEVIAFSDSVSRFNELNCEVLACSID--------SEYAHLQWTLQDRKKGGLGTMAIPIL--ADKTKNIAR-SYGVLEE 141 (219)
T ss_dssp CHHHHHHHTTHHHHHTTTEEEEEEESS--------CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTSHHHH-HTTCEET
T ss_pred chhHhhHHHHHhhhccCCcEEEEeeCC--------chhhHHHHhhhhHHhcCccccccccc--cCcccHHHH-HcCCccc
Confidence 479999999999999999999999975 688899998421 26899999 688887766 2322211
Q ss_pred CCCCCCCCCcccceeeEEECCCCcEEEEEcCCC----ChhHHHHHHHHh
Q 033221 77 GKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTT----SLLSLEHDIKKL 121 (125)
Q Consensus 77 ~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~----~~~~l~~~I~~l 121 (125)
. . -.....|||||++|+|++.+...+ +.+++.+.|+.+
T Consensus 142 ~----~---g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 142 S----Q---GVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp T----T---TEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred C----C---CeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 0 0 123478999999999999874333 344555555544
No 99
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.22 E-value=3.3e-11 Score=82.08 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=67.1
Q ss_pred hhhHHHHHHHHHHhccCCeE-EEEeeCCCCCCCCCCCHHHHHHHHHhhCCc--ccceeEeeccCCCccchHHHHHHhCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLE-ILAFPCNQFGEEEPGSNDQIADFVCTRFKS--EFPIFEKIDVNGEHASPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~-vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~--~fpv~~~~D~~g~~~~~~~~~l~~~~~ 79 (125)
+.|+|.|++.+++|+++|++ |+|||+| ++..+++|++ ++++ +||++ .|.++..++ .|..+....
T Consensus 59 t~e~~~f~~~~~ef~~~gv~~VigIS~D--------~~~~~~~w~~-~~~~~~~f~lL--SD~~~~~a~-ayGv~~~~~- 125 (171)
T 2xhf_A 59 NNHIPEYLSLYDKFKEEGYHTIACIAVN--------DPFVMAAWGK-TVDPEHKIRML--ADMHGEFTR-ALGTELDSS- 125 (171)
T ss_dssp TSSHHHHHHTHHHHHHTTCCEEEEEESS--------CHHHHHHHHH-HHCTTCCSEEE--ECTTSHHHH-HHTCBCCCH-
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeCC--------CHHHHHHHHH-hcCCCCCeEEE--EeCCchHHH-HhCCceecc-
Confidence 57999999999999999996 9999975 5888999995 6788 99999 687776655 232111000
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCC
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTT 109 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~ 109 (125)
.+|.+......||||| +|+|++.+....
T Consensus 126 -~~g~g~~~~R~tfvId-dG~V~~~~v~~~ 153 (171)
T 2xhf_A 126 -KMLGNNRSRRYAMLID-DNKIRSVSTEPD 153 (171)
T ss_dssp -HHHSSCCBCCEEEEEE-TTEEEEEEETTS
T ss_pred -ccCCCcceEEEEEEEe-CCEEEEEEEeCC
Confidence 0110123457899999 999999997543
No 100
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.22 E-value=5.9e-11 Score=81.50 Aligned_cols=90 Identities=13% Similarity=0.143 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHh-ccCCeE-EEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 4 SNYIELSQLYDKY-KDQGLE-ILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 4 ~e~p~l~~l~~~y-~~~g~~-vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
.|+|.|++.+++| +++|+. |+|||.| ++..+++|.+ ++++ +||++ .|.++..++. |..+... .
T Consensus 62 ~e~~~f~~~~~~f~~~~g~~~V~gvS~D--------~~~~~~~~~~-~~~~~~f~lL--sD~~~~~a~~-yGv~~~~--~ 127 (182)
T 1xiy_A 62 KMIPGYEEEYDYFIKENNFDDIYCITNN--------DIYVLKSWFK-SMDIKKIKYI--SDGNSSFTDS-MNMLVDK--S 127 (182)
T ss_dssp THHHHHHHTHHHHHTTSCCSEEEEEESS--------CHHHHHHHHH-HTTCCSSEEE--ECTTSHHHHH-TTCEEEC--G
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeCC--------CHHHHHHHHH-HcCCCCceEE--EeCchHHHHH-hCCceec--c
Confidence 7999999999999 999995 9999974 5888999995 6799 69999 6877765552 2211000 0
Q ss_pred CCCCCcccceeeEEECCCCcEEEEEcCC
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVDRYYPT 108 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~~~~G~ 108 (125)
.+|.++...+.+|||| +|+|++.+...
T Consensus 128 ~~G~g~~~~R~tfvId-dG~V~~~~v~~ 154 (182)
T 1xiy_A 128 NFFMGMRPWRFVAIVE-NNILVKMFQEK 154 (182)
T ss_dssp GGTCCEEECCEEEEEE-TTEEEEEEECS
T ss_pred ccCCCCceEEEEEEEc-CCEEEEEEEeC
Confidence 0221233468899999 99999998643
No 101
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.18 E-value=2.3e-11 Score=79.14 Aligned_cols=81 Identities=12% Similarity=0.203 Sum_probs=60.7
Q ss_pred hhhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~-~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++++++|++ +++.|++|+++ ++.+.+++|++ +++. +||++. .|.......
T Consensus 44 ~~~~~~l~~l~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~-~~~~~~~~~~~-~d~~~~~~~------------ 102 (144)
T 1i5g_A 44 RAFTPQLIDFYKAHAEKKNFEVMLISWD-------ESAEDFKDYYA-KMPWLALPFED-RKGMEFLTT------------ 102 (144)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHHHHHHHHT-TCSSEECCTTC-HHHHHHHHH------------
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHHHHHHHHH-hCCccccccCc-hHHHHHHHH------------
Confidence 4689999999999995 68999999986 25788999995 5664 677661 132222211
Q ss_pred CCCCCcccceeeEEEC-CCCcEEEEEc
Q 033221 81 IFGDDIQWNFAKFLVD-KNGQVVDRYY 106 (125)
Q Consensus 81 ~~g~~i~~~PttflId-~~G~v~~~~~ 106 (125)
.| ++.++|++|||| ++|+|+.++.
T Consensus 103 ~~--~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 103 GF--DVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HT--TCCSSSEEEEEETTTCCEEESCH
T ss_pred Hc--CCCCCCEEEEEECCCCcEEeccc
Confidence 15 478899999999 9999999763
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.13 E-value=3e-11 Score=78.83 Aligned_cols=82 Identities=17% Similarity=0.295 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCC-cccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~-~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~-~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++++++|++ +++.|++|+++ ++.+.+++|++ +++ .+||+.. .|.+.....
T Consensus 44 ~~~~p~l~~l~~~~~~~~~~~vv~v~~d-------~~~~~~~~~~~-~~~~~~~~~~~-~d~~~~~~~------------ 102 (146)
T 1o8x_A 44 RGFTPQLIEFYDKFHESKNFEVVFCTWD-------EEEDGFAGYFA-KMPWLAVPFAQ-SEAVQKLSK------------ 102 (146)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSHHHHHHHHT-TCSSEECCGGG-HHHHHHHHH------------
T ss_pred HHHHHHHHHHHHHhhhcCCeEEEEEeCC-------CCHHHHHHHHH-HCCceeeccch-hhHHHHHHH------------
Confidence 4689999999999994 68999999986 25788999995 556 4677661 132222211
Q ss_pred CCCCCcccceeeEEEC-CCCcEEEEEcC
Q 033221 81 IFGDDIQWNFAKFLVD-KNGQVVDRYYP 107 (125)
Q Consensus 81 ~~g~~i~~~PttflId-~~G~v~~~~~G 107 (125)
.| +|.++|++|||| ++|+|+.++.+
T Consensus 103 ~~--~v~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 103 HF--NVESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HT--TCCSSSEEEEEETTTCCEEESCHH
T ss_pred Hh--CCCCCCEEEEEECCCCeEEEecch
Confidence 15 478899999999 99999998643
No 103
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.13 E-value=4.2e-11 Score=80.26 Aligned_cols=81 Identities=14% Similarity=0.255 Sum_probs=59.7
Q ss_pred hhhHHHHHHHHHHhcc-CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCC-cccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKD-QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~-~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~-~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++++++|++ +++.||+|+++ ++.+.+++|++ +++ .++|+.. .|..+. +.+
T Consensus 64 ~~~~p~l~~l~~~~~~~~~v~vv~v~~d-------~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~--------l~~---- 122 (165)
T 3s9f_A 64 RGFTPQLVEFYEKHHDSKNFEIILASWD-------EEEDDFNAYYA-KMPWLSIPFAN-RNIVEA--------LTK---- 122 (165)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSHHHHHHHHT-TCSSEECCTTC-HHHHHH--------HHH----
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEecC-------CCHHHHHHHHH-hCCCcccccCc-hhHHHH--------HHH----
Confidence 4789999999999997 68999999986 24788999995 555 3566652 111011 111
Q ss_pred CCCCCcccceeeEEECCC-CcEEEEEc
Q 033221 81 IFGDDIQWNFAKFLVDKN-GQVVDRYY 106 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~-G~v~~~~~ 106 (125)
.| +|.++|++||||++ |+|+.+..
T Consensus 123 ~~--~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 123 KY--SVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp HT--TCCSSSEEEEEETTTCCEEESCH
T ss_pred Hc--CCCCCCEEEEEeCCCCEEEeccc
Confidence 15 48889999999998 99999864
No 104
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.69 E-value=8.8e-12 Score=80.67 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=60.9
Q ss_pred hhhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEe-eccCCCccchHHHHHHhCCC
Q 033221 3 NSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEK-IDVNGEHASPLYKLLKSGKW 79 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~--~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~-~D~~g~~~~~~~~~l~~~~~ 79 (125)
..++|.|++++++|++ .++.|++|++++ +.+.+++|++ +++++||.+.. .|..+....
T Consensus 42 ~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------- 102 (143)
T 2lus_A 42 RGFTPILADMYSELVDDSAPFEIIFVSSDR-------SEDDMFQYMM-ESHGDWLAIPYRSGPASNVTA----------- 102 (143)
Confidence 4689999999999953 579999999862 3567899995 78999886621 121122222
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEc
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYY 106 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~ 106 (125)
.| ++.++|++||||++|+|+.++.
T Consensus 103 -~~--~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 103 -KY--GITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 25 4788999999999999999863
No 105
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.04 E-value=1.5e-10 Score=75.09 Aligned_cols=81 Identities=11% Similarity=0.238 Sum_probs=58.9
Q ss_pred hhhHHHHHHHHHHhc-cCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCC-cccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYK-DQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK-SEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~-~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~-~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
..++|.|++++++|+ ++++.|++|+++ ++.+.+++|++ +++ .++|+.. .|.+.....
T Consensus 44 ~~~~~~l~~l~~~~~~~~~~~vv~i~~d-------~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~------------ 102 (144)
T 1o73_A 44 RGFTPVLAEFYEKHHVAKNFEVVLISWD-------ENESDFHDYYG-KMPWLALPFDQ-RSTVSELGK------------ 102 (144)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHHHHHHHHT-TCSSEECCTTC-HHHHHHHHH------------
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHHHHHHHHH-hCCceEeeccc-hhHHHHHHH------------
Confidence 468999999999998 468999999986 24778999995 555 3566541 122211111
Q ss_pred CCCCCcccceeeEEEC-CCCcEEEEEc
Q 033221 81 IFGDDIQWNFAKFLVD-KNGQVVDRYY 106 (125)
Q Consensus 81 ~~g~~i~~~PttflId-~~G~v~~~~~ 106 (125)
.| ++.++|++|||| ++|+|+.++.
T Consensus 103 ~~--~v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 103 TF--GVESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HH--TCCSSSEEEEEETTTCCEEESCH
T ss_pred Hc--CCCCCCEEEEEECCCCeEEecch
Confidence 14 478899999999 8999998763
No 106
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.78 E-value=8.4e-09 Score=68.24 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=36.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCC--ChhHHHHHHHHhhccC
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTT--SLLSLEHDIKKLLGLS 125 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~--~~~~l~~~I~~ll~~~ 125 (125)
+|.++||++|+|++|+++.++ |.. +.+.+.+.|+++++.|
T Consensus 113 ~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~k 154 (154)
T 2ju5_A 113 KVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALKLR 154 (154)
T ss_dssp TCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHTCC
T ss_pred CCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHhcC
Confidence 578899999999999999999 998 8889999999998764
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.78 E-value=1e-07 Score=60.37 Aligned_cols=40 Identities=15% Similarity=-0.002 Sum_probs=36.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||++++|++|+++.++.|..+.++|.+.|++++..
T Consensus 79 ~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 79 DANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred CCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 3677899999999999999999999999999999988764
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.56 E-value=3.7e-07 Score=58.76 Aligned_cols=40 Identities=23% Similarity=0.068 Sum_probs=34.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
+|.++||.+++|++|+++ ++.|..+.+.|.+.|+++|+++
T Consensus 102 ~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~k~ 141 (141)
T 3hxs_A 102 GIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLLKQ 141 (141)
T ss_dssp TCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC--
T ss_pred CCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHccC
Confidence 467789999999999998 7889999999999999998764
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.45 E-value=5.5e-07 Score=57.87 Aligned_cols=38 Identities=11% Similarity=0.039 Sum_probs=33.4
Q ss_pred CcccceeeEEECCCCcEE--EEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVV--DRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~--~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||++|+|++|+++ .++.|..+.++|.+.|+++-
T Consensus 88 ~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 88 NVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp TCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred CCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 478899999999999998 78999999999998887753
No 110
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.45 E-value=6.6e-07 Score=58.70 Aligned_cols=39 Identities=8% Similarity=0.124 Sum_probs=31.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|+++||++++ ++|+++.++.|..+.++|.+.|+++++.
T Consensus 88 ~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 88 NVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp TCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred CCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 58999999999 9999999999999999999999998764
No 111
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.42 E-value=1.6e-06 Score=55.66 Aligned_cols=39 Identities=13% Similarity=0.052 Sum_probs=34.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++|++|+++ ++.|..+.+.|.+.|++++..
T Consensus 89 ~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 89 GIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp TCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 467789999999999998 678999999999999998764
No 112
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.41 E-value=2.4e-06 Score=52.96 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=35.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.|..+.++|.+.|++.+..
T Consensus 68 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 68 GVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 47788999999 9999999999999999999999988765
No 113
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.33 E-value=1.4e-06 Score=55.47 Aligned_cols=36 Identities=17% Similarity=-0.002 Sum_probs=31.8
Q ss_pred ccceeeEEECCCCcEEEEEcC-------CCChhHHHHHHHHhh
Q 033221 87 QWNFAKFLVDKNGQVVDRYYP-------TTSLLSLEHDIKKLL 122 (125)
Q Consensus 87 ~~~PttflId~~G~v~~~~~G-------~~~~~~l~~~I~~ll 122 (125)
.++||++++|++|+++.++.| ..+.+.+.+.|+++.
T Consensus 90 ~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 788999999999999999998 677888888888764
No 114
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.32 E-value=4.2e-06 Score=51.51 Aligned_cols=39 Identities=23% Similarity=0.032 Sum_probs=34.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|..+||.+++ ++|+++.++.|..+.+.+.+.|+++++.
T Consensus 76 ~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 76 KVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred CCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 47788999999 9999999999999999999999998864
No 115
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.31 E-value=6.9e-06 Score=50.08 Aligned_cols=38 Identities=24% Similarity=0.123 Sum_probs=34.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.+++ ++|+++.++.|..+.+.|.+.|+++|+
T Consensus 71 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 71 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 47888999999 899999999999999999999998874
No 116
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.30 E-value=2.5e-06 Score=51.88 Aligned_cols=38 Identities=21% Similarity=0.169 Sum_probs=33.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.+++ ++|+++.++.|..+.+.+.+.|+++|+
T Consensus 68 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 105 (105)
T 1nsw_A 68 GIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVLQ 105 (105)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTTC
T ss_pred CCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHhC
Confidence 47788999999 999999999999999999988887763
No 117
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.29 E-value=7.6e-06 Score=52.16 Aligned_cols=38 Identities=24% Similarity=0.123 Sum_probs=34.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.++|.+.|+++|+
T Consensus 91 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 91 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 47889999999 999999999999999999999998874
No 118
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.29 E-value=4.9e-06 Score=50.62 Aligned_cols=38 Identities=24% Similarity=0.256 Sum_probs=34.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.+++ ++|+++.++.|..+.+.|.+.|+++|+
T Consensus 72 ~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 72 SVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred CcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 47888999999 999999999999999999999998863
No 119
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.28 E-value=8.8e-06 Score=53.68 Aligned_cols=39 Identities=23% Similarity=0.119 Sum_probs=34.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|++++++
T Consensus 115 ~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 115 RIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred CCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 47888999888 8999999999999999999999998875
No 120
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.27 E-value=5.2e-06 Score=51.06 Aligned_cols=39 Identities=8% Similarity=0.087 Sum_probs=33.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++||.+++ ++|+++.++.|..+.+.+.+.|+++|++
T Consensus 74 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 112 (112)
T 1t00_A 74 GVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFIAD 112 (112)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHHCC
T ss_pred CCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhhC
Confidence 47778986665 8999999999999999999999998863
No 121
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.27 E-value=5.5e-06 Score=50.30 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=34.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
++..+||.+++ ++|+++.++.|..+.+.+.+.|+++++.+
T Consensus 69 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~~ 108 (109)
T 2yzu_A 69 RVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHLPAT 108 (109)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC---
T ss_pred CCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHhhhc
Confidence 47788999999 99999999999999999999999988753
No 122
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.27 E-value=6.9e-06 Score=51.43 Aligned_cols=38 Identities=32% Similarity=0.414 Sum_probs=34.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|..+||.+++ ++|+++.++.|..+.+.|.+.|+++++
T Consensus 82 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 82 EVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhC
Confidence 47788999999 899999999999999999999998874
No 123
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.26 E-value=6.5e-06 Score=49.46 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=35.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++..+||.+++ ++|+++.++.|..+.+.+.+.|+++|++
T Consensus 66 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 104 (104)
T 2e0q_A 66 GVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLLGE 104 (104)
T ss_dssp TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred CccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHhcC
Confidence 47788999998 8999999999999999999999998864
No 124
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.26 E-value=6.6e-06 Score=50.09 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=32.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.+++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 70 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 70 GIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp TCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred CCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 47778997666 899999999999999999999998874
No 125
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.24 E-value=5.1e-06 Score=51.92 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=31.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||.+++ ++|+++.++.|. +.+.|.+.|+++|
T Consensus 81 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 81 EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp TCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred CCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 58889998777 899999999998 9999999998875
No 126
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.23 E-value=3.8e-06 Score=53.97 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=31.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+ +.++|+++.++.|..+.+.+.+.|++++..
T Consensus 89 ~v~~~Pt~~-~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 89 GVEGTPTLV-FYKEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp TCCSSSEEE-EEETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred CCceeCeEE-EEcCCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 478889555 445999999999999999999999998865
No 127
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.22 E-value=9.1e-06 Score=52.71 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=34.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|+++++.
T Consensus 106 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 106 RIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred CCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 47778998888 7999999999999999999999998864
No 128
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.21 E-value=9e-06 Score=49.23 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=32.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++.++||.+++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 70 ~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 70 EVMSIPTLIVF-KDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CCcccCEEEEE-eCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 46778998888 59999999999999999999998764
No 129
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=6.4e-06 Score=51.89 Aligned_cols=38 Identities=16% Similarity=0.022 Sum_probs=32.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|++ .++.|..+.+.|.+.|++++.+
T Consensus 74 ~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 74 IINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp TCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCGGG
T ss_pred CCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHhhc
Confidence 36778999999 89996 7888999999999999988653
No 130
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.20 E-value=1.2e-05 Score=51.62 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=35.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
++.++||.+++ ++|+++.++.|..+.+.+.+.|+++|+++
T Consensus 101 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 101 GVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred CCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHHccC
Confidence 47788998888 89999999999999999999999998753
No 131
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.18 E-value=2.4e-05 Score=47.38 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=32.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++..+||.+++ ++|+++.++.|..+.+.+.+.|++++
T Consensus 71 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 71 QVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred CCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 47788999999 99999999999999999999988764
No 132
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.17 E-value=7.7e-06 Score=51.85 Aligned_cols=70 Identities=20% Similarity=0.216 Sum_probs=51.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
...+|.|++++++|++ ++.++.|+++. .. ..+ ++ |
T Consensus 58 ~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------~~----~l~-~~--------------------------------~ 92 (128)
T 3ul3_B 58 TMQSTEMDKLQKYYGK-RIYLLKVDLDK-------NE----SLA-RK--------------------------------F 92 (128)
T ss_dssp HHHHHHHHHHHHHHGG-GEEEEEEEGGG-------CH----HHH-HH--------------------------------T
T ss_pred HHHhHHHHHHHHHhcC-CeEEEEEECCC-------CH----HHH-HH--------------------------------c
Confidence 3567888888888874 47788887641 11 222 12 3
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
+|.++||.+++ ++|+++.++.|..+.++|.+.|++
T Consensus 93 --~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 93 --SVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp --TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred --CCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 36778999999 799999999999999998887764
No 133
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.16 E-value=1.3e-05 Score=49.11 Aligned_cols=37 Identities=22% Similarity=0.038 Sum_probs=31.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+ +.++|+++.++.|. +.+.|.+.|+++++
T Consensus 75 ~v~~~Pt~~-~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 75 GITAMPTFH-VYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp TCCBSSEEE-EEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred CCCcccEEE-EEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 478889854 55899999999998 89999999999875
No 134
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.13 E-value=1.3e-05 Score=51.28 Aligned_cols=38 Identities=24% Similarity=0.365 Sum_probs=32.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.|. +.++|.+.|+++++.
T Consensus 96 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 96 EIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp TCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHHT
T ss_pred CCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 58889997777 999999999998 888999999888753
No 135
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.13 E-value=1.8e-05 Score=48.28 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=34.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|+++++
T Consensus 73 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 73 SLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp TCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 47888999999 899999999999999999999998875
No 136
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.11 E-value=1.6e-05 Score=49.04 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=31.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||.++++ +|+++.++.|. +++.|++.|++++
T Consensus 74 ~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 74 EVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 478889999887 99999999998 7788999888764
No 137
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.10 E-value=1.9e-05 Score=49.94 Aligned_cols=37 Identities=24% Similarity=0.271 Sum_probs=30.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.| .+++.|.+.|+++|+
T Consensus 88 ~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 88 AIQAMPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHLA 124 (124)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHCC
T ss_pred CCCccCEEEEE-ECCEEEEEEeC-CCHHHHHHHHHHhcC
Confidence 47889986655 99999999999 488899999988764
No 138
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.09 E-value=3.9e-05 Score=47.05 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=31.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++|| ++++++|+++.++.|.. .++|.+.|+++++
T Consensus 75 ~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 75 GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAARS 111 (111)
T ss_dssp CCSBSSE-EEEESSSSEEEEEESSC-HHHHHHHHHHHHC
T ss_pred CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 4788898 88889999999999974 8889999988763
No 139
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.08 E-value=1.7e-05 Score=52.12 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=34.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|+++||.+|+ ++|+++.+..|..+.+.|.+.|+++|+
T Consensus 88 gV~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 88 GAFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 59999998887 999999999999999999999998875
No 140
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.08 E-value=2.3e-05 Score=48.13 Aligned_cols=37 Identities=5% Similarity=0.012 Sum_probs=30.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|. .+++|.+.|+++++
T Consensus 73 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 73 EISAVPYFIII-HKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp TCCSSSEEEEE-ETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred CCCcccEEEEE-ECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 47889998777 799999999997 45679999988775
No 141
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.05 E-value=2.6e-05 Score=47.11 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=32.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++.++||.+++ ++|+++.++.|. +.+.+.+.|+++|
T Consensus 70 ~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 70 EVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 58889999999 899999999998 8999999998875
No 142
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=3.5e-05 Score=48.58 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=33.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++++ |+++.++.|..+.+.|.+.|.+++.
T Consensus 80 ~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 80 GIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp TCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHH
T ss_pred CCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhh
Confidence 4778899999987 9999999999999999999988875
No 143
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.04 E-value=6.5e-06 Score=51.76 Aligned_cols=37 Identities=22% Similarity=0.159 Sum_probs=32.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++..+||.+++ ++|+++.++.|. +++.|.+.|+++|+
T Consensus 85 ~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 85 GIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred CCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 47888997777 699999999998 89999999998874
No 144
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.04 E-value=2.9e-05 Score=48.39 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=32.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++||.+++ ++|+++.++.|.. .+.|.+.|+++++.
T Consensus 84 ~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 84 SVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred CCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 47888985555 9999999999998 89999999998764
No 145
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.03 E-value=2.7e-05 Score=49.71 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=33.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+|+ ++|+ +.++.|..+.+.|.+.|++++..
T Consensus 88 ~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 88 DVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp TCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHHSS
T ss_pred CCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhcCC
Confidence 47888999999 8899 67888999999999999998764
No 146
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=9.9e-06 Score=51.14 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=36.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||++++|++|+++.++.|..+.++|.+.|++++..
T Consensus 83 ~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 83 GVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp TCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 5888999999999999999999999999999999998754
No 147
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.02 E-value=2.7e-05 Score=47.47 Aligned_cols=37 Identities=24% Similarity=0.153 Sum_probs=31.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||.+++ ++|+++.++.|..+.++|.+.|++++
T Consensus 68 ~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 68 AVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp --CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 47888999999 59999999999999999999998876
No 148
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.02 E-value=3.3e-05 Score=50.51 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=33.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.++++ +|+++.++.|. ++++|.+.|+++++.
T Consensus 82 ~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 82 EISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRHASS 119 (153)
T ss_dssp TCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHSCT
T ss_pred CCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHHhcc
Confidence 588899999999 99999999885 778899999998764
No 149
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.01 E-value=3.4e-05 Score=46.52 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=31.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++.++||.+++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 69 ~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 69 NIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred CCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 47788986655 89999999999999999999998875
No 150
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.01 E-value=1.9e-05 Score=49.76 Aligned_cols=39 Identities=10% Similarity=-0.051 Sum_probs=34.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.++++++|+++.++.|..+.+.|.+.|.+.+.
T Consensus 86 ~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 86 GVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp TCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 477889999999999977888999999999888888764
No 151
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.00 E-value=2.8e-05 Score=50.85 Aligned_cols=37 Identities=11% Similarity=0.005 Sum_probs=33.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|+++||.+|+ ++|+++.+..|..+.++|.+.|++++
T Consensus 86 gV~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 86 GVAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp TCCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 58999998888 99999999999999999999998876
No 152
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.98 E-value=2.7e-05 Score=50.15 Aligned_cols=38 Identities=13% Similarity=0.030 Sum_probs=33.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|+++++
T Consensus 75 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 75 GVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp TCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 47788976666 899999999999999999999998875
No 153
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.98 E-value=3.2e-05 Score=53.15 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=34.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|++++..
T Consensus 165 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 165 GVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp TCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHHC
T ss_pred CCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCcc
Confidence 47788999988 9999999999999999999999988754
No 154
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.97 E-value=5.1e-05 Score=46.75 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=31.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++..+||.+++ ++|+++.++.| .+++.+.+.|++++++
T Consensus 78 ~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 78 NVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 57889987766 89999999999 5888999999998865
No 155
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.96 E-value=3.4e-05 Score=47.53 Aligned_cols=37 Identities=27% Similarity=0.168 Sum_probs=30.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||. ++.++|+++.++.|. +.+.|.+.|+++++
T Consensus 76 ~v~~~Pt~-~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 112 (112)
T 1syr_A 76 NITSMPTF-KVYKNGSSVDTLLGA-NDSALKQLIEKYAA 112 (112)
T ss_dssp TCCSSSEE-EEEETTEEEEEEESC-CHHHHHHHHHTTC-
T ss_pred CCCcccEE-EEEECCcEEEEEeCC-CHHHHHHHHHHhhC
Confidence 47888984 455799999999998 99999999988764
No 156
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.94 E-value=2e-05 Score=48.67 Aligned_cols=39 Identities=8% Similarity=0.074 Sum_probs=33.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++.++||.+++ ++|+++.++.|..++++|.+.|+..+..
T Consensus 69 ~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 69 GFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp TCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred CCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 58889999999 9999999999999999999999877643
No 157
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.94 E-value=2.7e-05 Score=51.00 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=31.8
Q ss_pred CcccceeeEEECCCCcEE---------EEEcC-CCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVV---------DRYYP-TTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~---------~~~~G-~~~~~~l~~~I~~ll 122 (125)
+|.++||++ ++++|+++ .++.| ..+.++|.+.|++++
T Consensus 74 ~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 74 DISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 477889988 77899999 88889 888899998888875
No 158
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.94 E-value=2.3e-05 Score=49.04 Aligned_cols=36 Identities=19% Similarity=0.084 Sum_probs=30.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++|| +++.++|+++.++.|.. .+++.+.|++++
T Consensus 88 ~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 88 GIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp CCSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred CCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 4788898 77779999999999976 888999888875
No 159
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.91 E-value=3.9e-06 Score=55.85 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=35.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCC-hhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTS-LLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~-~~~l~~~I~~ll~~ 124 (125)
++.++||++|||++|+++.++.|..+ .+++.+.|+++|++
T Consensus 127 ~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~ 167 (172)
T 3f9u_A 127 GANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp SCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999998 88888888887653
No 160
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.89 E-value=9.3e-05 Score=44.59 Aligned_cols=36 Identities=25% Similarity=0.173 Sum_probs=29.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++.++||.+ +.++|+++.++.| .+++.+.+.|+++|
T Consensus 71 ~v~~~Pt~~-~~~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 71 NISSMPTFV-FLKNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp TCCSSSEEE-EEETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred CCCcccEEE-EEcCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 478889854 4589999999999 68888988888764
No 161
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.89 E-value=6.8e-05 Score=47.55 Aligned_cols=38 Identities=5% Similarity=0.101 Sum_probs=31.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.| .+++.|.+.|+++++.
T Consensus 87 ~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 87 RVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred CCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 47889985555 99999999999 6889999999988764
No 162
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.88 E-value=4e-05 Score=47.52 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=33.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|..+||.+++ ++|+++.++.|..+.+.+.+.|+++++.
T Consensus 81 ~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 81 QVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred CCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 47788997777 6999999999999999999999887764
No 163
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.86 E-value=0.00012 Score=50.73 Aligned_cols=39 Identities=23% Similarity=0.083 Sum_probs=34.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|+++++.
T Consensus 81 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 81 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhccc
Confidence 47888998777 5999999999999999999999998764
No 164
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.86 E-value=6.7e-05 Score=53.60 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=33.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.+.+...|...+.
T Consensus 77 ~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 77 GLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred CCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 48889999999 799999999999999899888887653
No 165
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.84 E-value=6.6e-05 Score=46.50 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=29.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||.+++ ++|+++.++.| .+++.|.+.|+++|
T Consensus 82 ~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 82 NISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 58889985555 89999999999 57888998888764
No 166
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.82 E-value=9.3e-05 Score=45.02 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=29.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.+++ ++|+++.++.|.. .++|.+.|+++++
T Consensus 71 ~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~lg 107 (107)
T 1gh2_A 71 NISATPTFQFF-RNKVRIDQYQGAD-AVGLEEKIKQHLE 107 (107)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHHC
T ss_pred CCCcccEEEEE-ECCeEEEEEeCCC-HHHHHHHHHHhcC
Confidence 57889987777 8999999999954 4568888888763
No 167
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.82 E-value=8.1e-05 Score=46.27 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=28.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
+|.++||.+++ ++|+++.++.|.. ++.|.+.|++
T Consensus 80 ~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 80 EVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHT
T ss_pred CCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHh
Confidence 47888986665 9999999999988 8888877764
No 168
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.03 E-value=2.6e-06 Score=53.99 Aligned_cols=40 Identities=8% Similarity=0.095 Sum_probs=35.1
Q ss_pred CcccceeeEEECC-CCcE--EEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDK-NGQV--VDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~-~G~v--~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||++|+|+ +|++ +.++.|..+.+.|.+.|++++++
T Consensus 75 ~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 75 RVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 5888999999996 5999 89999999999999999988764
No 169
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.81 E-value=0.00013 Score=43.75 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=29.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++..+||.+++ ++|+++.++.| .+.+.|.+.|+++|
T Consensus 69 ~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 69 SVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred CCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 47889986655 69999999999 68888999888764
No 170
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.77 E-value=9.1e-06 Score=52.09 Aligned_cols=70 Identities=19% Similarity=0.066 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
+..+|.|++++++|++.++.++.|+++. . ..++ +++++..+
T Consensus 42 ~~~~p~~~~l~~~~~~~~v~~~~vd~~~-------~----~~~~-~~~~v~~~--------------------------- 82 (137)
T 2dj0_A 42 QSFAPIYADLSLKYNCTGLNFGKVDVGR-------Y----TDVS-TRYKVSTS--------------------------- 82 (137)
T ss_dssp TTTHHHHHHHHHHHCSSSCEEEECCTTT-------C----HHHH-HHTTCCCC---------------------------
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCcc-------C----HHHH-HHccCccc---------------------------
Confidence 3456777777777776567777776541 1 1233 24443311
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhH
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLS 113 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~ 113 (125)
.++.++||.+++ ++|+++.++.|..+.+.
T Consensus 83 -~~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~ 111 (137)
T 2dj0_A 83 -PLTKQLPTLILF-QGGKEAMRRPQIDKKGR 111 (137)
T ss_dssp -SSSSCSSEEEEE-SSSSEEEEESCBCSSSC
T ss_pred -CCcCCCCEEEEE-ECCEEEEEecCcCchHH
Confidence 023467999888 89999999999877654
No 171
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.77 E-value=8.4e-05 Score=46.15 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=29.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 119 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~ 119 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|+
T Consensus 84 ~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 84 GIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp TCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHT
T ss_pred CCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhh
Confidence 47889999988 59999999999999888877764
No 172
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.76 E-value=0.00018 Score=44.42 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=28.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
+|+++||.+++ ++|+++.++.|. +++.|.+.|++
T Consensus 70 ~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 70 QIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp TCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred CCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 58999976555 899999999994 78888888876
No 173
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.76 E-value=0.00036 Score=42.46 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=31.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.+++ ++|+++.++.| .+++.|.+.|++++.
T Consensus 76 ~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 76 NVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred CCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 47788988777 79999999999 688899999998874
No 174
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.73 E-value=0.00018 Score=43.62 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=30.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|++.
T Consensus 75 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 75 SVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred CCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHhc
Confidence 47888987777 8999999999999999998888753
No 175
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.69 E-value=0.00021 Score=55.98 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=58.8
Q ss_pred hhhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 3 NSNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~--~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
+..+|.+++++++|++ .++.|+.|+++. ++....+ ++
T Consensus 46 k~~~P~l~~la~~~~~~~~~v~~~~VD~d~---------d~~~~l~-~~------------------------------- 84 (519)
T 3t58_A 46 IAFAPTWKELANDVKDWRPALNLAVLDCAE---------ETNSAVC-RE------------------------------- 84 (519)
T ss_dssp HHHHHHHHHHHHHHGGGTTTEEEEEEETTS---------GGGHHHH-HH-------------------------------
T ss_pred HHHHHHHHHHHHHhhCcCCcEEEEEEECCc---------cccHHHH-HH-------------------------------
Confidence 4678999999999886 358888888741 1112333 12
Q ss_pred CCCCCcccceeeEEECC---CCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 81 IFGDDIQWNFAKFLVDK---NGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 81 ~~g~~i~~~PttflId~---~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| +|.++||.+++++ +|+++....|..+.+.|.+.|.+.++.
T Consensus 85 -~--~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~ 128 (519)
T 3t58_A 85 -F--NIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALES 128 (519)
T ss_dssp -T--TCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTT
T ss_pred -c--CCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhh
Confidence 3 3677899999998 888888888999999999999988764
No 176
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.68 E-value=0.00022 Score=41.24 Aligned_cols=34 Identities=24% Similarity=0.152 Sum_probs=28.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
++.++||.++ +|++ ++.|..+.+++.+.|+++|+
T Consensus 52 ~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~le 85 (85)
T 1nho_A 52 GLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEME 85 (85)
T ss_dssp CSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHCC
T ss_pred CceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHhC
Confidence 4778898887 8998 77788889999999988763
No 177
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.66 E-value=3.7e-05 Score=51.64 Aligned_cols=23 Identities=9% Similarity=0.030 Sum_probs=19.6
Q ss_pred cccceeeEEECCCCcEEEEEcCCC
Q 033221 86 IQWNFAKFLVDKNGQVVDRYYPTT 109 (125)
Q Consensus 86 i~~~PttflId~~G~v~~~~~G~~ 109 (125)
+.++||++++|++|+++.++ |..
T Consensus 108 v~~iPt~i~~~~~G~~~~~~-g~~ 130 (167)
T 1z6n_A 108 RIAIPLVLVLDEEFNLLGRF-VER 130 (167)
T ss_dssp SCCSSEEEEECTTCCEEEEE-ESS
T ss_pred CCCcCeEEEECCCCCEEEEE-cCC
Confidence 67789999999999999988 444
No 178
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.62 E-value=0.00039 Score=40.15 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=27.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++.++||.++ +|++ ++.|..+.+++.+.|+++|
T Consensus 53 ~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 53 GIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp TTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred CCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 4778898877 8998 7889889999999998764
No 179
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.61 E-value=7.3e-05 Score=47.22 Aligned_cols=38 Identities=24% Similarity=0.123 Sum_probs=34.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.+++.+.|+++|+
T Consensus 86 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 86 GIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp TCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred CCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 58889999999 999999999999999999999988764
No 180
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.60 E-value=0.00056 Score=44.26 Aligned_cols=38 Identities=3% Similarity=-0.108 Sum_probs=29.2
Q ss_pred CcccceeeEEECCCCcEEEE---------EcCCCC-hhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDR---------YYPTTS-LLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~---------~~G~~~-~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.+ +.|..+ .+++.+.|+++++
T Consensus 74 ~i~~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 74 ELYDPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp CSCSSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 58889999888 68998874 445554 7788888888764
No 181
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=97.59 E-value=0.00025 Score=49.01 Aligned_cols=88 Identities=11% Similarity=0.016 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHHHHh-ccCCe-EEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc----ccceeEeeccCCCccchHHHHHH
Q 033221 2 TNSNYIELSQLYDKY-KDQGL-EILAFPCNQFGEEEPGSNDQIADFVCTRFKS----EFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y-~~~g~-~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~----~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
|+..+|.+.+.++++ +.+|+ +|++|++| ++-.+.+|.+ ..++ .++.+ .|.+++.++. +....
T Consensus 86 S~~hlPgf~~~~d~~~k~kGvd~I~ciSVN--------D~FVm~AW~k-~~~~~~~~~i~~l--aD~~~eftka-lGl~~ 153 (199)
T 4h86_A 86 TVSHIPGYINYLDELVKEKEVDQVIVVTVD--------NPFANQAWAK-SLGVKDTTHIKFA--SDPGCAFTKS-IGFEL 153 (199)
T ss_dssp HHTTHHHHHHHHHHHHHHSCCCEEEEEESS--------CHHHHHHHHH-HTTCCCCSSEEEE--ECGGGHHHHH-TTCEE
T ss_pred ChhhChHHHHHHHHHHHhcCCcEEEEEEcC--------CHHHHHHHHH-Hhccccccccccc--CCcchHHHHh-cCcee
Confidence 356799999999875 77887 78999986 2666778874 4454 46777 5776665442 11110
Q ss_pred hCCCCCCCCCcccceeeEEECCCCcEEEEEc
Q 033221 76 SGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY 106 (125)
Q Consensus 76 ~~~~~~~g~~i~~~PttflId~~G~v~~~~~ 106 (125)
.. .+| ..+....++||| ||+|.+.+.
T Consensus 154 ~~---~~g-g~RS~Rya~IVd-DGvV~~~~v 179 (199)
T 4h86_A 154 AV---GDG-VYWSGRWAMVVE-NGIVTYAAK 179 (199)
T ss_dssp EE---ETT-EEEECSEEEEEE-TTEEEEEEE
T ss_pred ec---CCC-cceeeEEEEEEE-CCEEEEEEE
Confidence 00 011 244557889998 999999875
No 182
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.57 E-value=8.5e-05 Score=46.19 Aligned_cols=39 Identities=10% Similarity=-0.059 Sum_probs=30.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCC----CChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPT----TSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~----~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.++++++|++ .++.|. .+.+.|.+.|+++++.
T Consensus 72 ~v~~~Pt~~~~~~~~~~-~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 72 GIKAYPSVKLYQYERAK-KSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp TCCSSSEEEEEEEEGGG-TEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred CCCccceEEEEeCCCcc-ceeeccccCcCCHHHHHHHHHHHHHh
Confidence 47788999999888874 444454 7899999999988764
No 183
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.56 E-value=0.00018 Score=44.88 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=30.0
Q ss_pred CcccceeeEEECC---CCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDK---NGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~---~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||.++++. +|+++.++.|..+ ++|++.|++..
T Consensus 73 ~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~ 112 (118)
T 2f51_A 73 GVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFK 112 (118)
T ss_dssp TCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC
T ss_pred CCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhh
Confidence 5788999999976 5999999999764 56888887754
No 184
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.53 E-value=0.00044 Score=47.48 Aligned_cols=38 Identities=8% Similarity=-0.047 Sum_probs=32.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|++++.
T Consensus 189 ~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 189 NVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp TCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 47888996655 799999999999999999999988763
No 185
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.48 E-value=0.00057 Score=42.97 Aligned_cols=40 Identities=8% Similarity=0.018 Sum_probs=31.8
Q ss_pred CcccceeeEEECCCCcEEE-EEc-CCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVD-RYY-PTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~-~~~-G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++++.|++.. ++. |..+.+.|.+.|++++..
T Consensus 78 ~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 78 KVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp CCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred CCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 5888999999998887643 455 568889999999988764
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.46 E-value=0.00052 Score=47.38 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=30.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.++++ +|+++ ++.|..+.+.+.+.|.+.+.
T Consensus 86 ~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~~~~~ 122 (241)
T 3idv_A 86 DVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVREVSQ 122 (241)
T ss_dssp TCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHHHHHS
T ss_pred CCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHhhccC
Confidence 477789988885 68777 58899999999999988754
No 187
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.37 E-value=0.00018 Score=45.89 Aligned_cols=39 Identities=13% Similarity=-0.009 Sum_probs=32.8
Q ss_pred CcccceeeEEE-CCCCc--EEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLV-DKNGQ--VVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflI-d~~G~--v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||++++ |++|+ ++.++.|. +.++|.+.|++++.+
T Consensus 89 ~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 89 NIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp TCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred CCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 58899999998 45555 99999998 889999999998865
No 188
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.34 E-value=0.00024 Score=45.03 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=34.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+|++ +|+.+.|..|.++++.+.+.|++++.
T Consensus 73 ~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 73 PVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp CCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHh
Confidence 588999999998 99999999999999999999888765
No 189
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.25 E-value=0.001 Score=46.44 Aligned_cols=75 Identities=16% Similarity=0.160 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHhcc--CCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCC
Q 033221 4 SNYIELSQLYDKYKD--QGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGI 81 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~--~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~ 81 (125)
..+|.+++++++|++ .++.++.|+++. + . ....+ ++
T Consensus 47 ~~~p~~~~l~~~~~~~~~~v~~~~vd~~~----~--~---~~~l~-~~-------------------------------- 84 (244)
T 3q6o_A 47 AFAPTWXALAEDVKAWRPALYLAALDCAE----E--T---NSAVC-RD-------------------------------- 84 (244)
T ss_dssp HHHHHHHHHHHHTGGGTTTEEEEEEETTS----T--T---THHHH-HH--------------------------------
T ss_pred HHHHHHHHHHHHHHhccCcEEEEEEeCCc----h--h---hHHHH-HH--------------------------------
Confidence 567888888888876 458888888741 1 1 12233 12
Q ss_pred CCCCcccceeeEEECC-----CCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 82 FGDDIQWNFAKFLVDK-----NGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 82 ~g~~i~~~PttflId~-----~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
| +|.++||.+++++ +|+++ ++.| .+.+.|.+.|.+++..
T Consensus 85 ~--~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~ 128 (244)
T 3q6o_A 85 F--NIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALES 128 (244)
T ss_dssp T--TCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHT
T ss_pred c--CCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHh
Confidence 3 3667799999987 35555 5555 6889999999888753
No 190
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.22 E-value=0.0018 Score=40.48 Aligned_cols=37 Identities=5% Similarity=-0.167 Sum_probs=30.3
Q ss_pred CcccceeeEEECCCCcEE-EEEcCCCChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVV-DRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~-~~~~G~~~~~~l~~~I~~l 121 (125)
+|.++||.+++++.|++. .++.|..+.+.|.+.|+++
T Consensus 89 ~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 89 RVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 477889999998887764 5678999999999888764
No 191
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.10 E-value=0.00019 Score=47.63 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=32.2
Q ss_pred cccceeeEEECCCCcEEEEEcCC----------CChhHHHHHHHHhhc
Q 033221 86 IQWNFAKFLVDKNGQVVDRYYPT----------TSLLSLEHDIKKLLG 123 (125)
Q Consensus 86 i~~~PttflId~~G~v~~~~~G~----------~~~~~l~~~I~~ll~ 123 (125)
+.++||++|+|++|+++.++.|. .+.+.+.+.|++++.
T Consensus 101 ~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 101 GGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp CSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 36689999999999999998885 677888888888764
No 192
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.06 E-value=0.0015 Score=43.23 Aligned_cols=68 Identities=12% Similarity=0.244 Sum_probs=45.1
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCC-CcEEEEEcCCCChhHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKN-GQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~-G~v~~~~~G~~~~~~l~~~I 118 (125)
.++++++. + +|-++. .|.+...... ++.. | ++.++|+.+|||++ |+.+.++.| ++++++.+.|
T Consensus 68 ~~V~~~l~-~---~fv~v~-~d~~~~~~~~---l~~~-----y--~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L 131 (153)
T 2dlx_A 68 EAVKNIIR-E---HFIFWQ-VYHDSEEGQR---YIQF-----Y--KLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQV 131 (153)
T ss_dssp HHHHHHHH-H---TEEEEE-EESSSHHHHH---HHHH-----H--TCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHH
T ss_pred HHHHHHHH-c---CeEEEE-EecCCHhHHH---HHHH-----c--CCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHH
Confidence 45666763 3 454443 5664322222 2221 4 47788999999998 878787766 8999988888
Q ss_pred HHhhc
Q 033221 119 KKLLG 123 (125)
Q Consensus 119 ~~ll~ 123 (125)
++.+.
T Consensus 132 ~~~l~ 136 (153)
T 2dlx_A 132 TGFLG 136 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 193
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=96.99 E-value=0.0024 Score=47.01 Aligned_cols=37 Identities=8% Similarity=0.015 Sum_probs=30.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|+++||.+++ ++|++ ..+.|..+.+.|.+.|.+.+.
T Consensus 86 ~v~~~Pt~~~~-~~g~~-~~~~G~~~~~~l~~~i~~~~~ 122 (350)
T 1sji_A 86 GFDEEGSLYVL-KGDRT-IEFDGEFAADVLVEFLLDLIE 122 (350)
T ss_dssp TCCSTTEEEEE-ETTEE-EEECSCCCHHHHHHHHHTTSS
T ss_pred CCCccceEEEE-ECCcE-EEecCCCCHHHHHHHHHHhcC
Confidence 47778999999 88984 578899999999988887654
No 194
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=96.94 E-value=0.00036 Score=46.07 Aligned_cols=39 Identities=23% Similarity=0.095 Sum_probs=29.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCC-------CChhH---HHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPT-------TSLLS---LEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~-------~~~~~---l~~~I~~ll~ 123 (125)
++.++||++|+|++|+++.+..|. ..+++ +.+.++++|.
T Consensus 97 ~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 97 DGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp TCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 578899999999999999999998 55555 4444444443
No 195
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.88 E-value=0.00062 Score=41.60 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=34.8
Q ss_pred CcccceeeEEECCCCcEE--EEEcCCCChhHHHHHHHHhhccC
Q 033221 85 DIQWNFAKFLVDKNGQVV--DRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~--~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
++.++||.+++ ++|+++ .++.|..+.+.|.+.|+++++.+
T Consensus 78 ~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 78 GVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp TCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred CCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 47889999999 789987 88899999999999999988753
No 196
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.86 E-value=0.00059 Score=42.10 Aligned_cols=39 Identities=15% Similarity=-0.106 Sum_probs=33.3
Q ss_pred cccceeeEEECCCCcE-EEEEcCCCChhHHHHHHHHhhcc
Q 033221 86 IQWNFAKFLVDKNGQV-VDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 86 i~~~PttflId~~G~v-~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
|.++||.+++++.|++ +.++.|..+.+.|.+.|++++..
T Consensus 79 v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 79 IQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp CSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred cCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 5667999999999885 67788999999999999988754
No 197
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.68 E-value=0.008 Score=41.25 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=31.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.++++ +|+++. +.|..+.+.|.+.|.+.+..
T Consensus 201 ~v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~~~~~ 238 (241)
T 3idv_A 201 DVSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIEQSGA 238 (241)
T ss_dssp TCCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHHHTTC
T ss_pred CCcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHhhhCC
Confidence 588899888875 688877 78999999999999887653
No 198
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.63 E-value=0.012 Score=43.89 Aligned_cols=39 Identities=23% Similarity=0.213 Sum_probs=31.9
Q ss_pred CcccceeeEEECCCCcEEEE-EcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDR-YYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~-~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.+ +.|..+.+.|.+.|.+.+..
T Consensus 79 ~v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 79 RISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQQKSD 118 (382)
T ss_dssp TCCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHHHHSC
T ss_pred CCCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHHhccC
Confidence 47788987766 78998874 88999999999999887653
No 199
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.63 E-value=0.014 Score=40.94 Aligned_cols=35 Identities=11% Similarity=-0.022 Sum_probs=29.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|+++||+|+ +|+++ +.|..+.+++.+.|.+.++.
T Consensus 193 ~V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 193 GVMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp TCCSSSEEEE---TTEEE--EESCCCHHHHHHHHHHHHTT
T ss_pred CCeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHHHhhc
Confidence 5888999887 78875 77999999999999888753
No 200
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=96.63 E-value=0.0019 Score=42.64 Aligned_cols=34 Identities=6% Similarity=-0.100 Sum_probs=26.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+ | +|+ .+.|..+.+.|++.|+++++.
T Consensus 141 gv~gtPt~~-i--~g~---~~~G~~~~~~l~~~i~~~l~~ 174 (175)
T 3gyk_A 141 GFNGTPSFV-V--EDA---LVPGFVEQSQLQDAVDRARKA 174 (175)
T ss_dssp TCCSSSEEE-E--TTE---EECSCCCHHHHHHHHHHHHHH
T ss_pred CCccCCEEE-E--CCE---EeeCCCCHHHHHHHHHHHHhc
Confidence 478899655 5 454 566999999999999998754
No 201
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.61 E-value=0.0027 Score=42.37 Aligned_cols=38 Identities=3% Similarity=0.019 Sum_probs=30.6
Q ss_pred CcccceeeEEECCCCcEE--E-------EEcCCCC-hhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVV--D-------RYYPTTS-LLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~--~-------~~~G~~~-~~~l~~~I~~ll~ 123 (125)
+|+.+||.+|+ ++|+.+ . +..|..+ .++|.+.|++++.
T Consensus 92 ~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 92 ELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp TCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 58999998666 688887 4 7889887 8889998888764
No 202
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.63 E-value=0.00033 Score=41.88 Aligned_cols=37 Identities=38% Similarity=0.383 Sum_probs=32.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++..+|+.+++ ++|+++.++.|..+.+.+.+.|+++|
T Consensus 70 ~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 70 GIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 47889999999 89999999999998888888887764
No 203
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.60 E-value=0.008 Score=46.22 Aligned_cols=38 Identities=16% Similarity=-0.008 Sum_probs=31.2
Q ss_pred CcccceeeEEECCCCcE--EEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQV--VDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v--~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|++ +.++.|..+.+.|.+.|.+.+.
T Consensus 83 ~v~~~Pt~~~~-~~g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 83 NIPGFPSLKIF-KNSDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp TCCSSSEEEEE-ETTCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred CCCcCCEEEEE-eCCccccceeecCCCCHHHHHHHHHHhcC
Confidence 47778998888 56776 7888999999999999888764
No 204
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.011 Score=42.90 Aligned_cols=39 Identities=8% Similarity=-0.010 Sum_probs=28.7
Q ss_pred CcccceeeEEECCCC----------------cEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNG----------------QVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G----------------~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.++++..+ .....+.|..+.+.|.+.|.+.+.
T Consensus 88 ~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 88 DVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp TCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred CCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 467778888886532 246778899999998888877653
No 205
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.51 E-value=0.0049 Score=41.33 Aligned_cols=106 Identities=10% Similarity=-0.036 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHHhccCCeEEEEeeCCCCC--------------------------------CCCCCCHHHHHHHHHhhC-
Q 033221 4 SNYIELSQLYDKYKDQGLEILAFPCNQFG--------------------------------EEEPGSNDQIADFVCTRF- 50 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvgv~~~~~~--------------------------------~~e~~~~~~~~~f~~~~~- 50 (125)
...|.|.++.++|+. .+.+..+++..-. +.+..+.+.+.++++ +.
T Consensus 39 ~~~~~l~~l~~~~~~-~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~-~~~ 116 (195)
T 2znm_A 39 HFDPLLLKLGKALPS-DAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRSVAGKWAL-SQK 116 (195)
T ss_dssp SSCHHHHHHHHHSCT-TEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCTTSHHHHHHHHH-TCS
T ss_pred HHhHHHHHHHHHCCC-ceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCCCCCCHHHHHHHHH-HcC
Confidence 456889999999976 4888888763100 011124566777774 67
Q ss_pred CcccceeEeeccCCCccchHHH---HHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 51 KSEFPIFEKIDVNGEHASPLYK---LLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 51 ~~~fpv~~~~D~~g~~~~~~~~---~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
|++.+.+.. ..+......... .+.. .+ +|.++|| |+|| |+.+ ..|..+.++|.+.|+.+++
T Consensus 117 Gld~~~~~~-~~~~~~~~~~v~~~~~~a~----~~--gv~gtPt-~vin--g~~~--~~g~~~~~~l~~~i~~~l~ 180 (195)
T 2znm_A 117 GFDGKKLMR-AYDSPEAAAAALKMQKLTE----QY--RIDSTPT-VIVG--GKYR--VIFNNGFDGGVHTIKELVA 180 (195)
T ss_dssp SSCHHHHHH-HHTSHHHHHHHHHHHHHHH----HT--TCCSSSE-EEET--TTEE--ECCCSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHH-HhcCHHHHHHHHHHHHHHH----Hc--CCCCCCe-EEEC--CEEE--EcCCCCHHHHHHHHHHHHH
Confidence 877764310 001000000000 0111 13 5888999 8885 6542 3566778888888888764
No 206
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.50 E-value=0.011 Score=47.88 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=52.4
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIF 82 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~ 82 (125)
+..+|.|++++++|+++ +.++.|++++ .. ..+ ++ |
T Consensus 471 ~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~----~~~-~~--------------------------------~ 505 (780)
T 3apo_A 471 RALLPELRKASTLLYGQ-LKVGTLDCTI-------HE----GLC-NM--------------------------------Y 505 (780)
T ss_dssp HHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH--------------------------------T
T ss_pred HHHhHHHHHHHHHhcCC-eEEEEEeCCC-------CH----HHH-HH--------------------------------c
Confidence 35788888888888754 8888888641 11 122 12 3
Q ss_pred CCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 83 GDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 83 g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||++++ ++|++ .++.|..+.+.|.+.|++++.
T Consensus 506 --~v~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 506 --NIQAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp --TCCSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHHHHS
T ss_pred --CCCcCCeEEEE-cCCce-eeecCcccHHHHHHHHHhhcc
Confidence 36667999999 56887 778899999999999988764
No 207
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.41 E-value=0.0029 Score=51.20 Aligned_cols=39 Identities=10% Similarity=-0.025 Sum_probs=32.2
Q ss_pred CcccceeeEEECCCCcEEEEEcC----CCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYP----TTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G----~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+++ ++|+++.++.| ..+.+.|.+.|+++|++
T Consensus 726 ~v~~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 726 GIKAYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp TCCSSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred CCCcCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 47778999999 89998877766 57899999999998754
No 208
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.36 E-value=0.013 Score=44.65 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=32.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+++.++.|..+.+.|.+.|.+.+.
T Consensus 72 ~v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 72 GVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp TCCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred CCCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHhhcc
Confidence 47888977766 899999999999999999999888764
No 209
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.31 E-value=0.022 Score=43.39 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=33.0
Q ss_pred CcccceeeEEECCCCcE-EEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQV-VDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v-~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++++.|++ +.++.|..+.+.+.+.|++.+.
T Consensus 422 ~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 422 EVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp CCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCS
T ss_pred CCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcC
Confidence 47888999999988885 6778899999999999988754
No 210
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.15 E-value=0.012 Score=40.36 Aligned_cols=35 Identities=9% Similarity=-0.045 Sum_probs=28.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.++ +|+ +.++.|..+.+.+.+.|.++++
T Consensus 186 ~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 186 QVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp TCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred CCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 5888999887 788 4668899999999888887764
No 211
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.84 E-value=0.027 Score=39.89 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=26.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCC-------hhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTS-------LLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~-------~~~l~~~I~~l 121 (125)
+|.++||.+++ ++|+++.++.|..+ .+.|+..|.+.
T Consensus 182 ~I~~~PTll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 182 SSDVLPTLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp CTTTCSEEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCCCCEEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 58889998777 59999999998643 34566666543
No 212
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.76 E-value=0.0022 Score=39.89 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=31.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
++..+||.+++ ++|+++.++.| .+.+.|.+.|+++++.
T Consensus 86 ~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 86 NVEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TCCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred CCCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 47888986555 99999999988 5788999999988764
No 213
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.70 E-value=0.011 Score=37.53 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=29.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCC-------ChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTT-------SLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~-------~~~~l~~~I~~l 121 (125)
+|..+||.++++ +|+++.++.|.. +.++|++.|.+.
T Consensus 77 ~i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 77 HDNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp CSSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 588999988885 999999999976 667788877765
No 214
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.61 E-value=0.011 Score=39.86 Aligned_cols=21 Identities=0% Similarity=-0.319 Sum_probs=18.4
Q ss_pred CcccceeeEEECCCCcEEEEE
Q 033221 85 DIQWNFAKFLVDKNGQVVDRY 105 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~ 105 (125)
++.++||++|++++|+++...
T Consensus 101 gv~g~Pt~v~l~~dG~~v~~~ 121 (173)
T 3ira_A 101 GRGGWPLNIIMTPGKKPFFAG 121 (173)
T ss_dssp SCCCSSEEEEECTTSCEEEEE
T ss_pred CCCCCcceeeECCCCCceeee
Confidence 367889999999999999873
No 215
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=95.52 E-value=0.042 Score=40.20 Aligned_cols=38 Identities=8% Similarity=-0.053 Sum_probs=31.4
Q ss_pred CcccceeeEEECCC-CcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKN-GQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~-G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|.++||.+++++. |+.+.++.|..+.+.|.+.|++-.
T Consensus 318 ~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 318 KVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp CCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred CCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 58889999999665 778888999999999988887653
No 216
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.51 E-value=0.019 Score=34.07 Aligned_cols=63 Identities=11% Similarity=0.018 Sum_probs=40.4
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 119 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~ 119 (125)
..++.+++ +.+..+..- .|.+... .+. . .| +++ +|+.++ .+|+.+. |..+++.|++.|+
T Consensus 15 ~~~~~~L~-~~~~~~~~~--vdid~~~--~l~----~----~~--g~~-vPtl~~--~~G~~v~---g~~~~~~L~~~l~ 73 (87)
T 1ttz_A 15 DQAVEALA-QARAGAFFS--VFIDDDA--ALE----S----AY--GLR-VPVLRD--PMGRELD---WPFDAPRLRAWLD 73 (87)
T ss_dssp HHHHHHHH-HTTCCCEEE--EECTTCH--HHH----H----HH--TTT-CSEEEC--TTCCEEE---SCCCHHHHHHHHH
T ss_pred HHHHHHHH-HHHHhheEE--EECCCCH--HHH----H----Hh--CCC-cCeEEE--ECCEEEe---CCCCHHHHHHHHH
Confidence 56778884 567765333 5654321 111 1 14 366 898766 7899875 7888999999988
Q ss_pred Hhhc
Q 033221 120 KLLG 123 (125)
Q Consensus 120 ~ll~ 123 (125)
+.+.
T Consensus 74 ~~~~ 77 (87)
T 1ttz_A 74 AAPH 77 (87)
T ss_dssp TCC-
T ss_pred HHHH
Confidence 7654
No 217
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=95.45 E-value=0.023 Score=37.84 Aligned_cols=34 Identities=9% Similarity=-0.040 Sum_probs=25.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++|| |+|| |+.+ ..|. +.+.+.+.|+.++++
T Consensus 152 gv~gtPt-~vin--g~~~--~~g~-~~~~l~~~i~~~~~~ 185 (193)
T 2rem_A 152 RPVGTPT-IVVN--GRYM--VTGH-DFEDTLRITDYLVSR 185 (193)
T ss_dssp CCSSSSE-EEET--TTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred CCCCCCe-EEEC--CEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 4888998 7885 5543 2466 888999999888753
No 218
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=94.95 E-value=0.052 Score=32.97 Aligned_cols=100 Identities=8% Similarity=0.068 Sum_probs=54.1
Q ss_pred ChhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCH--HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCC
Q 033221 2 TNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSN--DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKW 79 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~--~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~ 79 (125)
+.+++..+.+..++.-.....++ +..+ ..+ ..+..+++ +.+..|.++. +|.+.. .......+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~vv~-f~a~-------~C~~C~~~~~~l~-~~~~~~~~v~-v~~~~~-~~~~~~~l~~~-- 68 (116)
T 2e7p_A 2 SKQELDAALKKAKELASSAPVVV-FSKT-------YCGYCNRVKQLLT-QVGASYKVVE-LDELSD-GSQLQSALAHW-- 68 (116)
T ss_dssp CHHHHHHHHHHHHHHHTSSSEEE-EECT-------TCHHHHHHHHHHH-HHTCCCEEEE-GGGSTT-HHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHHHHcCCCEEE-EECC-------CChhHHHHHHHHH-HcCCCeEEEE-ccCCCC-hHHHHHHHHHH--
Confidence 45666666665555443333344 5432 222 45666774 5678886653 443322 11111112221
Q ss_pred CCCCCCcccceeeEEECCCCcEEEEEcCCC---ChhHHHHHHHHh
Q 033221 80 GIFGDDIQWNFAKFLVDKNGQVVDRYYPTT---SLLSLEHDIKKL 121 (125)
Q Consensus 80 ~~~g~~i~~~PttflId~~G~v~~~~~G~~---~~~~l~~~I~~l 121 (125)
| ++..+|+. ++ +|+++..+.|.. +.+.|.+.|+++
T Consensus 69 --~--~v~~~Pt~-~~--~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 69 --T--GRGTVPNV-FI--GGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp --H--SCCSSCEE-EE--TTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred --h--CCCCcCEE-EE--CCEEECChHHHHHHHhCChHHHHHHHc
Confidence 4 47788988 45 699988776554 555677777664
No 219
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=94.91 E-value=0.039 Score=34.18 Aligned_cols=33 Identities=6% Similarity=-0.148 Sum_probs=20.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 119 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~ 119 (125)
+|.++||.++++..++++. ..| .+++.|++.|+
T Consensus 89 ~i~~~Pt~~~~~~~~~~~g-~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 89 KVTAVPTLLKYGTPQKLVE-SEC-LQANLVEMLFS 121 (123)
T ss_dssp CCCSSSEEEETTSSCEEEG-GGG-GCHHHHHHHHH
T ss_pred CCCeeCEEEEEcCCceEec-ccc-CCHHHHHHHHh
Confidence 4788999999988544432 222 34566666554
No 220
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=94.85 E-value=0.017 Score=40.48 Aligned_cols=38 Identities=11% Similarity=0.042 Sum_probs=30.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|+++||.|+.|++|++ .+..|..++++|.+.|++.+.
T Consensus 196 gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 196 GANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp TCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC---
T ss_pred CCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 48899999999889976 567799999999988877654
No 221
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=94.82 E-value=0.14 Score=37.82 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=30.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|+++||.+++. +|+++ .+.|..+.+.|.+.|.+.+.
T Consensus 88 ~V~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 88 GLTEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp TCCSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred CCCcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 488889988885 78885 78899999999988887654
No 222
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=94.81 E-value=0.023 Score=38.66 Aligned_cols=40 Identities=8% Similarity=-0.115 Sum_probs=33.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhccC
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGLS 125 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~~ 125 (125)
+|.++|| |+|+.+|+.+....|..+.+.+.+.|+++++++
T Consensus 166 gv~g~Pt-~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~~ 205 (208)
T 3kzq_A 166 GVNSYPS-LVLQINDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp TCCSSSE-EEEEETTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred CCCcccE-EEEEECCEEEEeeCCCCCHHHHHHHHHHHHhcc
Confidence 4788896 667788888888889999999999999988653
No 223
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=94.68 E-value=0.072 Score=41.26 Aligned_cols=27 Identities=19% Similarity=0.214 Sum_probs=21.1
Q ss_pred hhhHHHHHHHHHHhccC-C------eEEEEeeCC
Q 033221 3 NSNYIELSQLYDKYKDQ-G------LEILAFPCN 29 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~-g------~~vvgv~~~ 29 (125)
+..+|.+++++++|+++ | +.|+.|+++
T Consensus 58 k~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 58 RRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp HHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 45789999999998743 2 888888875
No 224
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=94.36 E-value=0.1 Score=32.81 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=31.2
Q ss_pred Cccc--ceeeEEECC-CCcEEEEEc--CCCChhHHHHHHHHhhcc
Q 033221 85 DIQW--NFAKFLVDK-NGQVVDRYY--PTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~--~PttflId~-~G~v~~~~~--G~~~~~~l~~~I~~ll~~ 124 (125)
+|+. +||..+++. +|+. ++.. |..+.+.|.+.|+++++.
T Consensus 73 gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~G 116 (133)
T 2djk_A 73 NLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVAG 116 (133)
T ss_dssp TCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHT
T ss_pred CCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHcC
Confidence 4787 899988874 6887 4665 999999999999988753
No 225
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=94.32 E-value=0.028 Score=31.43 Aligned_cols=29 Identities=7% Similarity=-0.057 Sum_probs=21.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCC-ChhHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTT-SLLSLEHDI 118 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~-~~~~l~~~I 118 (125)
+|.++||.++ +|+++.+ |.. +.+++.+.|
T Consensus 47 ~v~~~Pt~~~---~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 47 GLTALPGLAV---DGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp TCSSSSCEEE---TTEEEEC--SSCCCHHHHHHHC
T ss_pred CCCcCCEEEE---CCEEEEc--CCCCCHHHHHHHh
Confidence 4677898877 8998877 877 777776554
No 226
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.96 E-value=0.27 Score=33.34 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=29.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|+++||..++. +|....++.|..+.+++...+..++
T Consensus 78 ~v~~~Ptl~~~~-~~~~~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 78 GVDRVPTIVIEG-DKDYGIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp TCCBSSEEEEES-SSCCCEEEESCCCTTHHHHHHHHHH
T ss_pred CCCcCcEEEEEC-CCcccceecCCccHHHHHHHHHHHH
Confidence 589999988885 6777788889888888777776654
No 227
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=93.84 E-value=0.094 Score=32.72 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=27.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCC-------ChhHHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTT-------SLLSLEHDIKK 120 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~-------~~~~l~~~I~~ 120 (125)
+|+++||.+++ ++|+++.++.|.. +.++|+..|.+
T Consensus 70 ~v~~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 70 HDNCLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp CGGGCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CCCCCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 59999987766 8999999999875 45667776654
No 228
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=93.49 E-value=0.071 Score=36.82 Aligned_cols=36 Identities=8% Similarity=0.167 Sum_probs=29.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCCh-------hHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSL-------LSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~-------~~l~~~I~~l 121 (125)
+|.++||.+++ ++|+++.++.|..+. ++|++.|.+.
T Consensus 169 ~i~~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 169 SSDVLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp CGGGCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 58999998888 599999999997764 6777777653
No 229
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=93.09 E-value=0.21 Score=29.89 Aligned_cols=68 Identities=10% Similarity=0.058 Sum_probs=41.2
Q ss_pred HHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 39 NDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 39 ~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
=..+++|++ +.|++|-.+. +|.+.. ..+.+.+..+ +.+.+|+.|+ .||.+.. | -+.++|++.+
T Consensus 17 C~~aK~~L~-~~gi~y~~id-i~~d~~----~~~~~~~~~~-----G~~tVP~I~i--~Dg~~l~---~-~~~~el~~~L 79 (92)
T 2lqo_A 17 CLRLKTALT-ANRIAYDEVD-IEHNRA----AAEFVGSVNG-----GNRTVPTVKF--ADGSTLT---N-PSADEVKAKL 79 (92)
T ss_dssp HHHHHHHHH-HTTCCCEEEE-TTTCHH----HHHHHHHHSS-----SSSCSCEEEE--TTSCEEE---S-CCHHHHHHHH
T ss_pred HHHHHHHHH-hcCCceEEEE-cCCCHH----HHHHHHHHcC-----CCCEeCEEEE--eCCEEEe---C-CCHHHHHHHH
Confidence 367899995 6799998763 333222 2223332111 2456798665 4676643 2 3678899888
Q ss_pred HHhhc
Q 033221 119 KKLLG 123 (125)
Q Consensus 119 ~~ll~ 123 (125)
.++++
T Consensus 80 ~el~g 84 (92)
T 2lqo_A 80 VKIAG 84 (92)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 88754
No 230
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=93.08 E-value=0.084 Score=34.32 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=28.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|+++||.++ .+|++ ..|..+.+.|.+.|++.+.+
T Consensus 106 gI~gtPt~vi--~nG~~---i~G~~~~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 106 GFNGTPTLVF--PNGRT---QSGYSPMPQLEEIIRKNQQE 140 (147)
T ss_dssp TCCSSCEEEC--TTSCE---EESCCCTTHHHHHHHHTSCC
T ss_pred CCCccCEEEE--ECCEE---eeCCCCHHHHHHHHHHHHHh
Confidence 5899998665 57874 56999999999999988765
No 231
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=92.55 E-value=0.33 Score=34.07 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=27.9
Q ss_pred Ccc--cceeeEEECCCCc--EEEEEcCCCChhHHHHHHHHh
Q 033221 85 DIQ--WNFAKFLVDKNGQ--VVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~--~~PttflId~~G~--v~~~~~G~~~~~~l~~~I~~l 121 (125)
+|. ++||.+++ ++|+ ...++.|..+.+.|.+.|.+.
T Consensus 78 ~V~~~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 78 KLDKESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp TCCGGGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCCCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 578 88988777 6677 356788988888888888765
No 232
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.98 E-value=0.3 Score=32.76 Aligned_cols=38 Identities=8% Similarity=-0.007 Sum_probs=31.4
Q ss_pred CcccceeeEEECCCC---cEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNG---QVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G---~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
++...|+..||++.| +|+.+..|.++++++...+...+
T Consensus 127 ~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 127 KTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp CSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 467789999998764 88999999999998877776654
No 233
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=91.84 E-value=0.8 Score=32.30 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=27.8
Q ss_pred Ccc--cceeeEEECCCCcE--EEEE--cCCCChhHHHHHHHHhh
Q 033221 85 DIQ--WNFAKFLVDKNGQV--VDRY--YPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~--~~PttflId~~G~v--~~~~--~G~~~~~~l~~~I~~ll 122 (125)
+|+ ++||.+++- |++ ...+ .|..+.+.|.+.|.+.+
T Consensus 90 ~V~~~~~PTl~~F~--G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK--GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp TCCTTSCCEEEEES--SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CCCcCCCCeEEEEe--CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 477 889988885 873 5566 78899999988888764
No 234
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=91.45 E-value=0.26 Score=33.21 Aligned_cols=38 Identities=11% Similarity=-0.122 Sum_probs=30.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ .+|+.+....|..+.+.+.+.|+++++
T Consensus 173 gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 173 GISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp TCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred CCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 47888986654 578877678899999999999998875
No 235
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=91.08 E-value=0.37 Score=33.21 Aligned_cols=37 Identities=16% Similarity=0.042 Sum_probs=28.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+|..+|+.++++++|++.......-+.+.+...++++
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 4888999999999999998876655566666666554
No 236
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=91.03 E-value=0.1 Score=36.22 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=28.6
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCC--------hhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTS--------LLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~--------~~~l~~~I~~ll~~ 124 (125)
+|.++||.||++.+|+.+ .|..+ .+.+.+.|++++++
T Consensus 168 GV~GtPtfvv~~~nG~~~---~Ga~~~~~~G~~~~e~l~~~I~~~l~~ 212 (226)
T 3f4s_A 168 GITAVPIFFIKLNDDKSY---IEHNKVKHGGYKELKYFTNVIDKLYGK 212 (226)
T ss_dssp CCCSSCEEEEEECCTTCC---CCGGGGEEESCCCHHHHHHHHHHHHHH
T ss_pred CCCcCCEEEEEcCCCEEe---eCCCCcccccccCHHHHHHHHHHHHhc
Confidence 478899988878888853 35444 99999999998764
No 237
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=89.65 E-value=0.15 Score=33.81 Aligned_cols=37 Identities=11% Similarity=-0.086 Sum_probs=27.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++|| |+| +|+.+....|..+.+.+.+.|+.++++
T Consensus 149 gv~gtPt-~~v--ng~~~~~~~G~~~~e~l~~~i~~l~~k 185 (192)
T 3h93_A 149 QVTGVPT-MVV--NGKYRFDIGSAGGPEETLKLADYLIEK 185 (192)
T ss_dssp TCCSSSE-EEE--TTTEEEEHHHHTSHHHHHHHHHHHHHH
T ss_pred CCCCCCe-EEE--CCEEEecccccCCHHHHHHHHHHHHHH
Confidence 4788896 555 688766655778899999999888753
No 238
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=89.33 E-value=0.61 Score=28.64 Aligned_cols=29 Identities=7% Similarity=-0.173 Sum_probs=20.4
Q ss_pred cccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 86 IQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 86 i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
++ +|+.+++ .+|+++. .|..+++.|++.|
T Consensus 78 v~-VP~l~~~-~dG~~v~--~g~~~~~~L~~~L 106 (107)
T 2fgx_A 78 DR-VPVLFAV-NEDKELC--HYFLDSDVIGAYL 106 (107)
T ss_dssp TS-CSEEEET-TTTEEEE--CSSCCCHHHHHHH
T ss_pred CC-CceEEEE-ECCEEEE--ecCCCHHHHHHHh
Confidence 55 8986544 5788873 4778888877665
No 239
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=89.10 E-value=0.44 Score=32.49 Aligned_cols=34 Identities=18% Similarity=0.136 Sum_probs=27.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+ | +|+. +.|..+.+.|.+.|++++++
T Consensus 165 GV~GtPtfv-v--ng~~---~~G~~~~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 165 NVSGTPSFM-I--DGIL---LAGTHDWASLRPQILARLNE 198 (205)
T ss_dssp CCCSSSEEE-E--TTEE---CTTCCSHHHHHHHHHHHHTC
T ss_pred CCccCCEEE-E--CCEE---EeCCCCHHHHHHHHHHHhhc
Confidence 488899755 5 5664 57999999999999999876
No 240
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=89.02 E-value=0.38 Score=32.06 Aligned_cols=37 Identities=19% Similarity=0.019 Sum_probs=28.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++|+.+ | +|+.+-...|..+.+.+.+.|+.++++
T Consensus 149 gv~GtPtfv-v--ng~~~v~~~Ga~~~e~~~~~i~~ll~k 185 (185)
T 3feu_A 149 GISSVPTFV-V--NGKYNVLIGGHDDPKQIADTIRYLLEK 185 (185)
T ss_dssp TCCSSSEEE-E--TTTEEECGGGCSSHHHHHHHHHHHHTC
T ss_pred CCCccCEEE-E--CCEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 478889754 5 577654457888999999999998863
No 241
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=88.95 E-value=0.38 Score=31.22 Aligned_cols=37 Identities=22% Similarity=0.080 Sum_probs=27.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|+++|| |+| +|+.+-...+..+.+++.+.|+.||+.
T Consensus 147 gv~gTPt-fiI--NGky~v~~~~~~s~e~~~~~i~~Ll~k 183 (184)
T 4dvc_A 147 GLTGVPA-VVV--NNRYLVQGQSAKSLDEYFDLVNYLLTL 183 (184)
T ss_dssp TCCSSSE-EEE--TTTEEECGGGCSSHHHHHHHHHHHTTC
T ss_pred CCCcCCE-EEE--CCEEeeCCcCCCCHHHHHHHHHHHHhC
Confidence 4889996 667 576443344567788999999998864
No 242
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=88.72 E-value=0.28 Score=37.50 Aligned_cols=38 Identities=26% Similarity=0.013 Sum_probs=31.7
Q ss_pred CcccceeeEEECCCCcE--EEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQV--VDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v--~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+++ ++|+. +.++.|..+.+.|.+.|++.+.
T Consensus 428 ~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 428 VIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp CCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred CceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 58889998888 88976 6778899999999999988754
No 243
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=88.15 E-value=0.65 Score=27.69 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=23.9
Q ss_pred ccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 87 QWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 87 ~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
..+|+. ++ +|+.+ ..+..+++.|++.|++++..
T Consensus 65 ~~vP~l-~~--~g~~~--~~~g~~~~~l~~~l~~~~~~ 97 (100)
T 1wjk_A 65 FDIPVF-HL--NGQFL--MMHRVNTSKLEKQLRKLSGP 97 (100)
T ss_dssp SSCSEE-EE--SSSEE--EESSCCHHHHHHHHHSSSCS
T ss_pred CCCCEE-EE--CCEEE--EecCCCHHHHHHHHHHHHhh
Confidence 667964 45 57765 34558889999999888765
No 244
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=87.83 E-value=0.59 Score=28.23 Aligned_cols=28 Identities=25% Similarity=0.203 Sum_probs=21.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
+|+++||.++ +|++ +.|..+.++|.+.+
T Consensus 63 ~V~~~PT~~i---~G~~---~~G~~~~~~l~~~~ 90 (106)
T 3kp8_A 63 GITSYPTWII---NGRT---YTGVRSLEALAVAS 90 (106)
T ss_dssp TCCSSSEEEE---TTEE---EESCCCHHHHHHHH
T ss_pred CCeEeCEEEE---CCEE---ecCCCCHHHHHHHh
Confidence 5899999554 7874 67999988887665
No 245
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=87.44 E-value=0.31 Score=33.24 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=25.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|+++||.|+.| |+ ++.|..++++|++.|++++
T Consensus 178 gV~gtPt~v~~d--G~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 178 GVSGTPAVVLSN--GT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp TCCSSSEEECTT--SC---EEESCCCHHHHHHHHHHHH
T ss_pred CCCccCEEEEcC--Ce---EecCCCCHHHHHHHHHHhh
Confidence 488999876544 54 4568889999998888765
No 246
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=86.72 E-value=0.54 Score=30.51 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=21.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 119 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~ 119 (125)
+|.++|| |+|| |+. +.|..+.+.|++.|+
T Consensus 146 gv~gtPt-~vvn--g~~---~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 146 HIQFVPT-IIIG--EYI---FDESVTEEELRGYIE 174 (175)
T ss_dssp TCCSSCE-EEET--TEE---ECTTCCHHHHHHHHT
T ss_pred CCCCcCe-EEEC--CEE---ccCCCCHHHHHHHhc
Confidence 4888998 7774 663 468888888887764
No 247
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=86.69 E-value=0.47 Score=31.19 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=26.7
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++|| |+|| |+.+-...|..+++.+.+.|+.++++
T Consensus 159 gv~gtPt-~~in--g~~~~~~~g~~~~~~l~~~i~~~l~k 195 (195)
T 3c7m_A 159 KIQGVPA-YVVN--GKYLIYTKSIKSIDAMADLIRELASK 195 (195)
T ss_dssp HHHCSSE-EEET--TTEEECGGGCCCHHHHHHHHHHHHTC
T ss_pred CCCccCE-EEEC--CEEEeccCCCCCHHHHHHHHHHHHhC
Confidence 4778898 6774 65432233777899999999998863
No 248
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=86.25 E-value=0.43 Score=32.46 Aligned_cols=32 Identities=6% Similarity=-0.050 Sum_probs=25.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+|+++||.|+ .+|+ +..|..++++|++.|+++
T Consensus 178 gV~gTPt~vi--~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 178 GVRGTPSIVT--STGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp TCCSSCEEEC--TTSC---CCCSCCCHHHHHHHHHHC
T ss_pred CCCcCCEEEE--eCCE---EecCCCCHHHHHHHHHhc
Confidence 5889998766 5676 467888999999888764
No 249
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=86.01 E-value=0.73 Score=31.14 Aligned_cols=34 Identities=24% Similarity=0.175 Sum_probs=26.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++||.+ | +|+. +.|..+.+.|.+.|++++..
T Consensus 160 gV~gtPtfv-v--nG~~---~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 160 NIQATPTIY-V--NDKV---IKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp TCCSSCEEE-E--TTEE---CSCTTCHHHHHHHHHHHHHH
T ss_pred CCCcCCEEE-E--CCEE---ecCCCCHHHHHHHHHHHHHh
Confidence 488899755 5 5765 56889999999999988753
No 250
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=85.89 E-value=2.5 Score=30.56 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=26.3
Q ss_pred Cccc--ceeeEEECCCCcEEEEEc---CCCChhHHHHHHHHhhc
Q 033221 85 DIQW--NFAKFLVDKNGQVVDRYY---PTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~--~PttflId~~G~v~~~~~---G~~~~~~l~~~I~~ll~ 123 (125)
++.. +|+..+++..+.. .++. |..+.+.|.+.++..++
T Consensus 188 gi~~~~~P~~~~~~~~~~~-~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 188 GLKKEECPAVRLITLEEEM-TKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp TCCTTTCSEEEEEECC--C-CEECCSSCCCCHHHHHHHHHHHHT
T ss_pred CCCccCCccEEEEEcCCcc-cccCCCccccCHHHHHHHHHHHhc
Confidence 3655 8998888875543 2333 67889999999988764
No 251
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=85.62 E-value=0.69 Score=30.39 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=23.5
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||.+ | +|+. +.|..+.+.|.+.|+++++
T Consensus 146 gv~GtPt~v-v--nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 146 HIKTTPTAF-I--NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp TCCSSSEEE-E--TTEE---CSCTTCHHHHHHHHHC---
T ss_pred CCCCCCeEE-E--CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 478899855 5 6764 4588899999999988764
No 252
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=84.75 E-value=5.2 Score=24.75 Aligned_cols=27 Identities=19% Similarity=0.294 Sum_probs=18.5
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCN 29 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~ 29 (125)
++|+-.+....+..+.+|+.|-=.|..
T Consensus 23 d~~L~~~~~~~~~lk~~Gi~V~RyNL~ 49 (110)
T 3kgk_A 23 DQALVDFSTDVQWLKQSGVQIERFNLA 49 (110)
T ss_dssp -CHHHHHHHHHHHHHHHTCCEEEEETT
T ss_pred CHHHHHHHHHHHHHHHCCCeEEEEccc
Confidence 456667777777777777777777764
No 253
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=82.92 E-value=0.79 Score=28.52 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=26.3
Q ss_pred Ccc-cceeeEEECCCCcEEEE-EcCCCChhHHHHHH
Q 033221 85 DIQ-WNFAKFLVDKNGQVVDR-YYPTTSLLSLEHDI 118 (125)
Q Consensus 85 ~i~-~~PttflId~~G~v~~~-~~G~~~~~~l~~~I 118 (125)
+|+ ..|+.+|+ ++|+++++ .-+.++.+.|++.+
T Consensus 77 ~V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 77 NVKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp TCCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhh
Confidence 477 58998888 99999998 45788888777654
No 254
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=82.75 E-value=1.6 Score=30.27 Aligned_cols=35 Identities=9% Similarity=-0.018 Sum_probs=26.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|.++|+ |+|| |+ +...|..+++.+.+.|++++++
T Consensus 180 Gv~GvPt-fvv~--g~--~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 180 GATGVPF-FVLD--RA--YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp TCCSSSE-EEET--TT--EEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCeeCe-EEEC--Cc--EeecCCCCHHHHHHHHHHHHhh
Confidence 4788897 5564 55 2346889999999999998765
No 255
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=82.07 E-value=1.4 Score=24.45 Aligned_cols=64 Identities=5% Similarity=-0.118 Sum_probs=34.3
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIK 119 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~ 119 (125)
..++.+++ +.+++|-.+ |.+... .+..++.+ + ++..+|+.| + +|+.+ +..+++.|++.|+
T Consensus 15 ~~~~~~l~-~~~i~~~~v---di~~~~--~~~~~~~~-----~--g~~~vP~~~-~--~g~~~----~g~~~~~l~~~l~ 74 (81)
T 1h75_A 15 HATKRAME-NRGFDFEMI---NVDRVP--EAAEALRA-----Q--GFRQLPVVI-A--GDLSW----SGFRPDMINRLHP 74 (81)
T ss_dssp HHHHHHHH-HTTCCCEEE---ETTTCH--HHHHHHHH-----T--TCCSSCEEE-E--TTEEE----ESCCHHHHGGGSC
T ss_pred HHHHHHHH-HCCCCeEEE---ECCCCH--HHHHHHHH-----h--CCCccCEEE-E--CCEEE----ecCCHHHHHHHHh
Confidence 56778884 578888765 333211 12223332 3 367789874 4 46542 3356666666555
Q ss_pred Hhhc
Q 033221 120 KLLG 123 (125)
Q Consensus 120 ~ll~ 123 (125)
++++
T Consensus 75 ~~~~ 78 (81)
T 1h75_A 75 APHA 78 (81)
T ss_dssp CC--
T ss_pred cccc
Confidence 5443
No 256
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=80.34 E-value=12 Score=27.95 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccce
Q 033221 6 YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPI 56 (125)
Q Consensus 6 ~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv 56 (125)
+|.+.+|.+..+.+|+.|+-||.. ..+-++.++ ++.|+.|.+
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia-~~lg~~y~i 264 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFA-TDTNNNYKM 264 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHH-HCTTSSCCC
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHH-HHhCcccCC
Confidence 688999999999999999999842 255667777 466766644
No 257
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=78.47 E-value=11 Score=25.00 Aligned_cols=23 Identities=9% Similarity=-0.009 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhc-----cCCeEEEEeeCC
Q 033221 6 YIELSQLYDKYK-----DQGLEILAFPCN 29 (125)
Q Consensus 6 ~p~l~~l~~~y~-----~~g~~vvgv~~~ 29 (125)
.|.|+++.++|. ++ +.|.-|+++
T Consensus 63 ~P~~e~lA~~~~~~~~~~~-v~f~kvD~d 90 (178)
T 3ga4_A 63 EKTYHAVADVIRSQAPQSL-NLFFTVDVN 90 (178)
T ss_dssp HHHHHHHHHHHHHHCTTCC-EEEEEEETT
T ss_pred HHHHHHHHHHhhhccCCCC-EEEEEEECc
Confidence 588888888886 33 777777764
No 258
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=78.01 E-value=2.6 Score=22.79 Aligned_cols=59 Identities=7% Similarity=-0.019 Sum_probs=33.1
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
..++.+++ +.+++|-.+ |.+.. ..+..++.. + ++..+|+.+ + +|++ ..| .+++.+++.|
T Consensus 15 ~~~~~~l~-~~~i~~~~~---di~~~--~~~~~~~~~-----~--~~~~vP~l~-~--~g~~---~~g-~~~~~l~~~l 73 (75)
T 1r7h_A 15 TATKKALD-RAGLAYNTV---DISLD--DEARDYVMA-----L--GYVQAPVVE-V--DGEH---WSG-FRPERIKQLQ 73 (75)
T ss_dssp HHHHHHHH-HTTCCCEEE---ETTTC--HHHHHHHHH-----T--TCBCCCEEE-E--TTEE---EES-CCHHHHHHHH
T ss_pred HHHHHHHH-HcCCCcEEE---ECCCC--HHHHHHHHH-----c--CCCccCEEE-E--CCeE---EcC-CCHHHHHHHH
Confidence 56788885 678888766 33321 112223322 3 367789876 4 5664 334 4666666554
No 259
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=76.39 E-value=1.3 Score=29.25 Aligned_cols=25 Identities=4% Similarity=-0.044 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHhccCCeEEEEeeCC
Q 033221 4 SNYIELSQLYDKYKDQGLEILAFPCN 29 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvgv~~~ 29 (125)
...|.|.++.++|.+ .+.+.-++.+
T Consensus 42 ~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 42 AIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp HHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred HhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 456889999999987 5888888875
No 260
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=76.31 E-value=2.5 Score=28.22 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=26.7
Q ss_pred CcccceeeEEECCCCcEE-EEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVV-DRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~-~~~~G~~~~~~l~~~I~~ll 122 (125)
+|..+||.+++ ++|+.. .++.|..+.+.+...+..++
T Consensus 75 ~v~~~Pt~~~~-~~g~~~~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 75 RIDRAPATTIT-QDGKDFGVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp TCCSSSEEEEE-ETTBCCSEEEESCCCTTHHHHHHHHHH
T ss_pred CCCcCceEEEE-cCCceeeEEEeccCcHHHHHHHHHHHH
Confidence 58889998877 567543 66778777777777776654
No 261
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=74.13 E-value=5.8 Score=21.95 Aligned_cols=17 Identities=12% Similarity=0.108 Sum_probs=12.3
Q ss_pred CcccceeeEEECCCCcEEEE
Q 033221 85 DIQWNFAKFLVDKNGQVVDR 104 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~ 104 (125)
+++.+|+.++ +|+++..
T Consensus 52 gv~~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 52 GVKSVPALVI---DGAAFHI 68 (80)
T ss_dssp TCCEEEEEEE---TTEEEEE
T ss_pred CCCcCCEEEE---CCEEEEe
Confidence 4788898665 7887653
No 262
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=73.54 E-value=18 Score=24.31 Aligned_cols=37 Identities=11% Similarity=-0.107 Sum_probs=28.9
Q ss_pred cceeeEEECCCCcEEEEEc-CCCChhHHHHHHHHhhcc
Q 033221 88 WNFAKFLVDKNGQVVDRYY-PTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 88 ~~PttflId~~G~v~~~~~-G~~~~~~l~~~I~~ll~~ 124 (125)
..|+..+++..+...+... +..+.+.|.+-++.+++.
T Consensus 189 ~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~G 226 (227)
T 4f9z_D 189 QLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSG 226 (227)
T ss_dssp GCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTT
T ss_pred cCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCC
Confidence 6799999987666555553 778999999999988764
No 263
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=72.89 E-value=2.7 Score=24.83 Aligned_cols=65 Identities=5% Similarity=0.007 Sum_probs=35.7
Q ss_pred HHHHHHHHhhCCcccceeEeeccC-CCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVN-GEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~-g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
..++.+++ +.++.|..+. +|.. ......++..+.+. + +...+|+.|+ +. |+ +.|..+++.|++.|
T Consensus 36 ~~ak~~L~-~~~i~y~~vd-I~~~~~~~~~~~~~~l~~~----~--g~~~vP~l~i-~~-~~----~igg~~~~~l~~~L 101 (103)
T 3nzn_A 36 KKTKKLLT-DLGVDFDYVY-VDRLEGKEEEEAVEEVRRF----N--PSVSFPTTII-ND-EK----AIVGFKEKEIRESL 101 (103)
T ss_dssp HHHHHHHH-HHTBCEEEEE-GGGCCHHHHHHHHHHHHHH----C--TTCCSCEEEE-TT-TE----EEESCCHHHHHHHT
T ss_pred HHHHHHHH-HcCCCcEEEE-eeccCcccHHHHHHHHHHh----C--CCCccCEEEE-CC-CE----EEEcCCHHHHHHHh
Confidence 67888995 5699998763 4431 11112233333321 2 3567898665 32 43 34556777766554
No 264
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=71.19 E-value=3.9 Score=27.10 Aligned_cols=33 Identities=18% Similarity=0.005 Sum_probs=23.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++||. +| +|+.+.- | .+.+.+.+.|+.+++
T Consensus 151 gv~gtPt~-vv--ng~~~~~--~-~~~e~l~~~i~~ll~ 183 (193)
T 3hz8_A 151 QIDGVPTV-IV--GGKYKVE--F-ADWESGMNTIDLLAD 183 (193)
T ss_dssp TCCSSSEE-EE--TTTEEEC--C-SSHHHHHHHHHHHHH
T ss_pred CCCcCCEE-EE--CCEEEec--C-CCHHHHHHHHHHHHH
Confidence 47889974 55 5765432 3 388888888888775
No 265
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=69.86 E-value=6 Score=25.06 Aligned_cols=61 Identities=18% Similarity=0.246 Sum_probs=40.3
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEc-CCCChhHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYY-PTTSLLSLEHDI 118 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~-G~~~~~~l~~~I 118 (125)
.+++.|++....-.||-+. .. | -....|...|.|.+|+++.+.. ...+.+.+++.+
T Consensus 36 PeVk~FI~~d~~~~fpnL~---vk------------------y--v~Ga~P~LvLlD~~Ge~~E~I~IekW~tD~I~efL 92 (126)
T 2a4h_A 36 PQIQAFIQSGRPAKFPNLQ---IK------------------Y--VRGLDPVVKLLDASGKVQETLSITKWNTDTVEEFF 92 (126)
T ss_dssp TTHHHHHHHTTGGGCTTBC---CC------------------C--CSSCCCEEEECCSSSCCSEEEECSSSSCSHHHHHH
T ss_pred HHHHHHHccchhhhCCceE---EE------------------E--ecCCCCEEEEecCCCCEeeEeccccCCHHHHHHHH
Confidence 4689999644444588661 10 1 0123488999999999877654 566777887777
Q ss_pred HHhhc
Q 033221 119 KKLLG 123 (125)
Q Consensus 119 ~~ll~ 123 (125)
.+-|.
T Consensus 93 ~ekL~ 97 (126)
T 2a4h_A 93 ETHLA 97 (126)
T ss_dssp HHHSC
T ss_pred HHHhh
Confidence 76553
No 266
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=69.18 E-value=3 Score=18.53 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=13.0
Q ss_pred eeEEECCCCcEEEEE
Q 033221 91 AKFLVDKNGQVVDRY 105 (125)
Q Consensus 91 ttflId~~G~v~~~~ 105 (125)
++.|.|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 478899999999876
No 267
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=69.12 E-value=3.3 Score=28.10 Aligned_cols=34 Identities=6% Similarity=-0.055 Sum_probs=24.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
+|.++|| |+||.+|+ -..+.|....+.+.+.|.+
T Consensus 179 gv~G~Pt-fvv~~~g~-~~~~~G~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 179 GAFGLPT-TVAHVDGK-TYMLFGSDRMELLAYLLGE 212 (226)
T ss_dssp TCCSSCE-EEEEETTE-EEEEESTTCHHHHHHHHTC
T ss_pred CCCCCCE-EEEeCCCC-cCceeCCCcHHHHHHHhcC
Confidence 4788897 67887765 2345688877788777754
No 268
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=67.41 E-value=11 Score=20.78 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=27.8
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+.--|..++|+|+..-.|..+.....+.|+.+..
T Consensus 13 frfrLka~NGevI~sSe~Y~sk~~a~~gI~sVk~ 46 (64)
T 3bid_A 13 YRWRLKAANHEIIAQGEGYTSKQNCQHAVDLLKS 46 (64)
T ss_dssp EEEEEECTTSCEEEECCCBSCHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCEEEECCCcCCHHHHHHHHHHHHH
Confidence 3447899999999988888899888888887653
No 269
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=65.51 E-value=6.8 Score=25.69 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=22.5
Q ss_pred ChhhHHHHHHHHHHhccCCeEEEEeeCC
Q 033221 2 TNSNYIELSQLYDKYKDQGLEILAFPCN 29 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~g~~vvgv~~~ 29 (125)
|+.....+.+..++|..+|++||||+..
T Consensus 110 ~~~~~~~i~~~~~~la~~GlRvLavA~k 137 (170)
T 3gwi_A 110 DDIMLRKIKRVTDTLNRQGLRVVAVATK 137 (170)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEEEE
Confidence 4444567888899999999999999863
No 270
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=65.32 E-value=4 Score=27.11 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=24.0
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
+|.++|+ |+|| |+ .+.|..+.+.+.+.|++...
T Consensus 164 Gv~G~Pt-fvi~--g~---~~~G~~~~~~l~~~l~~~~~ 196 (203)
T 2imf_A 164 KVFGVPT-MFLG--DE---MWWGNDRLFMLESAMGRLCR 196 (203)
T ss_dssp TCCSSSE-EEET--TE---EEESGGGHHHHHHHHHHHHH
T ss_pred CCCcCCE-EEEC--CE---EEECCCCHHHHHHHHhcccc
Confidence 4778897 5564 65 34588888888888887653
No 271
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=62.89 E-value=15 Score=22.52 Aligned_cols=27 Identities=15% Similarity=0.327 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHHhccCCeEEEEeeCC
Q 033221 3 NSNYIELSQLYDKYKDQGLEILAFPCN 29 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~~g~~vvgv~~~ 29 (125)
++|+-.+....+..+.+|+.|-=.|..
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~ 52 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLR 52 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETT
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 567777777777777788887777764
No 272
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=61.62 E-value=4 Score=31.74 Aligned_cols=23 Identities=17% Similarity=0.049 Sum_probs=18.8
Q ss_pred CcccceeeEEECCCCcEEEEEcC
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYP 107 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G 107 (125)
+|..+|+.++++++|++......
T Consensus 202 gV~~~Pslvl~~~nGk~~~~~v~ 224 (519)
T 3t58_A 202 GVTDFPSCYLLLRNGSVSRVPVL 224 (519)
T ss_dssp TCCCSSEEEEEETTSCEEECCCS
T ss_pred CCCCCCeEEEEeCCCceeecccc
Confidence 48888999999999998766433
No 273
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=61.33 E-value=12 Score=21.93 Aligned_cols=27 Identities=11% Similarity=0.068 Sum_probs=22.6
Q ss_pred hhhHHHHHHHHHHhcc----CCeEEEEeeCC
Q 033221 3 NSNYIELSQLYDKYKD----QGLEILAFPCN 29 (125)
Q Consensus 3 ~~e~p~l~~l~~~y~~----~g~~vvgv~~~ 29 (125)
...+|.|++++++|++ ..+.++.|+++
T Consensus 41 ~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 41 KALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred HHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 4678999999999986 26899999975
No 274
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=60.03 E-value=4.7 Score=24.22 Aligned_cols=52 Identities=12% Similarity=0.112 Sum_probs=27.9
Q ss_pred HHHHHHHHhhCCcc---cceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEE
Q 033221 40 DQIADFVCTRFKSE---FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 40 ~~~~~f~~~~~~~~---fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~ 103 (125)
..++.++ ++.++. |-.+. +|.+.. .......+.+. + ++..+|+.| + +|+.+.
T Consensus 33 ~~~~~~L-~~~~~~~~~~~~vd-i~~~~~-~~~~~~~l~~~----~--g~~~vP~v~-i--~g~~ig 87 (114)
T 2hze_A 33 RNALDIL-NKFSFKRGAYEIVD-IKEFKP-ENELRDYFEQI----T--GGKTVPRIF-F--GKTSIG 87 (114)
T ss_dssp HHHHHHH-TTSCBCTTSEEEEE-GGGSSS-HHHHHHHHHHH----H--SCCSSCEEE-E--TTEEEE
T ss_pred HHHHHHH-HHcCCCcCceEEEE-ccCCCC-hHHHHHHHHHH----h--CCCCcCEEE-E--CCEEEe
Confidence 5788889 467888 66552 333210 01122233321 3 367789765 5 587654
No 275
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=59.93 E-value=19 Score=19.61 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=16.6
Q ss_pred cccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 86 IQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 86 i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+..+|+.| + +|+.+. | .+++.+.+++-
T Consensus 56 ~~~vP~i~-~--~g~~i~---~---~~~l~~~~~~~ 82 (85)
T 1ego_A 56 VETVPQIF-V--DQQHIG---G---YTDFAAWVKEN 82 (85)
T ss_dssp SCCSCEEE-E--TTEEEE---S---SHHHHHHHHHH
T ss_pred CceeCeEE-E--CCEEEE---C---HHHHHHHHHHh
Confidence 67789864 5 577653 2 25666666654
No 276
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=58.82 E-value=9.6 Score=25.01 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=22.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCCh------hHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSL------LSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~------~~l~~~I~~ll~~ 124 (125)
+|.++||.+ | +|+.+-...+..+. +.+.+.|+.|+++
T Consensus 142 gv~GtPt~~-v--ng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li~k 184 (189)
T 3l9v_A 142 GVRGTPSVY-V--RGRYHINNAAFGAFSVENFRSRYAAVVRKLLAG 184 (189)
T ss_dssp TCCSSSEEE-E--TTTEEECGGGCCCSSHHHHHHHHHHHHHHHHCC
T ss_pred CCCccCEEE-E--CCEEEECccccccccccchHHHHHHHHHHHHhC
Confidence 478889754 5 46654333222233 6777788887754
No 277
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=58.70 E-value=19 Score=21.21 Aligned_cols=53 Identities=19% Similarity=0.211 Sum_probs=29.3
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEE
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~ 103 (125)
..++.+++ ++++.|..+. +|........+-.++... + +...+|+.| | +|+.+.
T Consensus 33 ~~~~~~L~-~~~i~~~~~d-i~~~~~~~~~~~~~l~~~----~--g~~tvP~if-i--~g~~ig 85 (113)
T 3rhb_A 33 TEVKTLFK-RLGVQPLVVE-LDQLGPQGPQLQKVLERL----T--GQHTVPNVF-V--CGKHIG 85 (113)
T ss_dssp HHHHHHHH-HTTCCCEEEE-GGGSTTHHHHHHHHHHHH----H--SCCSSCEEE-E--TTEEEE
T ss_pred HHHHHHHH-HcCCCCeEEE-eecCCCChHHHHHHHHHH----h--CCCCcCEEE-E--CCEEEc
Confidence 67889995 6899998763 443211111122233331 2 346679875 4 576543
No 278
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=58.55 E-value=22 Score=19.87 Aligned_cols=65 Identities=14% Similarity=0.018 Sum_probs=34.9
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCC-ccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGE-HASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~-~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
..++.+++ +.++.|..+. +|.... ....+...+.+. + ++..+|+.++ +|+++ .| .+++.+++.|
T Consensus 26 ~~~~~~L~-~~gi~~~~~~-v~~~~~~~~~~~~~~l~~~----~--g~~~vP~l~~---~g~~i---~G-~~~~~l~~~l 90 (92)
T 3ic4_A 26 KRTLEFLK-REGVDFEVIW-IDKLEGEERKKVIEKVHSI----S--GSYSVPVVVK---GDKHV---LG-YNEEKLKELI 90 (92)
T ss_dssp HHHHHHHH-HHTCCCEEEE-GGGCCHHHHHHHHHHHHHH----H--SSSCSCEEEE---TTEEE---ES-CCHHHHHHHH
T ss_pred HHHHHHHH-HcCCCcEEEE-eeeCCccchHHHHHHHHHh----c--CCCCcCEEEE---CCEEE---eC-CCHHHHHHHh
Confidence 67888885 6799998763 342111 111111222221 2 3456798765 56542 24 4777777765
Q ss_pred H
Q 033221 119 K 119 (125)
Q Consensus 119 ~ 119 (125)
.
T Consensus 91 ~ 91 (92)
T 3ic4_A 91 R 91 (92)
T ss_dssp H
T ss_pred c
Confidence 4
No 279
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=57.19 E-value=17 Score=23.10 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=23.7
Q ss_pred ceeeEEECCCCcEEEEE-cCCCChhHHHHHHHH
Q 033221 89 NFAKFLVDKNGQVVDRY-YPTTSLLSLEHDIKK 120 (125)
Q Consensus 89 ~PttflId~~G~v~~~~-~G~~~~~~l~~~I~~ 120 (125)
.|+..|.|.+|+++.+. +...+.+.+++.+.+
T Consensus 56 ~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 56 DPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 48999999999987765 345567777776654
No 280
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=53.78 E-value=15 Score=28.18 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=25.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+|+.+|+.++ +|+.+.. |..+.+++.+.|...
T Consensus 167 ~i~svPt~~i---~g~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 167 NVMGVPAVFV---NGKEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp TCCSSSEEEE---TTEEEEE--SCCCHHHHHHHHCCS
T ss_pred CCCccCEEEE---CCEEEec--CCCCHHHHHHHHhhc
Confidence 5889999876 8988865 888888888777554
No 281
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=52.93 E-value=5.6 Score=26.29 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=21.1
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
+|.++|| |+| +|+++.-..|..+.+++.+.|
T Consensus 151 GV~gtPt-f~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 151 GIHVSPT-FMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp TCCSSSE-EEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred CCCccCE-EEE--CCEEccCCCCCCCHHHHHHHh
Confidence 4788897 556 577764455777777776654
No 282
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=51.05 E-value=29 Score=18.97 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=36.3
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCC---CcccceeeEEECCCCcEEEEEcCCCChhHHHH
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGD---DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEH 116 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~---~i~~~PttflId~~G~v~~~~~G~~~~~~l~~ 116 (125)
..++.+++ +.++.|.+.. +|.... ......+.+. +|. ++..+|+.|+ +|+.+. ...++.+
T Consensus 18 ~~~~~~L~-~~~i~~~~~~-vd~~~~--~~~~~el~~~----~g~~~~~~~~vP~i~i---~g~~i~------g~~~i~~ 80 (89)
T 3msz_A 18 VWAKQWFE-ENNIAFDETI-IDDYAQ--RSKFYDEMNQ----SGKVIFPISTVPQIFI---DDEHIG------GFTELKA 80 (89)
T ss_dssp HHHHHHHH-HTTCCCEEEE-CCSHHH--HHHHHHHHHT----TTCCSSCCCSSCEEEE---TTEEEE------SHHHHHH
T ss_pred HHHHHHHH-HcCCCceEEE-eecCCC--hhHHHHHHHH----hCCCCCCCCccCEEEE---CCEEEe------ChHHHHH
Confidence 67888995 6799998763 343211 0011122222 221 2367898765 676543 3456666
Q ss_pred HHHHhhc
Q 033221 117 DIKKLLG 123 (125)
Q Consensus 117 ~I~~ll~ 123 (125)
.++++++
T Consensus 81 ~~~~~~~ 87 (89)
T 3msz_A 81 NADKILN 87 (89)
T ss_dssp THHHHTT
T ss_pred HHHHHhc
Confidence 6666654
No 283
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=50.43 E-value=12 Score=26.95 Aligned_cols=28 Identities=25% Similarity=0.312 Sum_probs=21.2
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDI 118 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I 118 (125)
+|+++|| +++ +|+. +.|..+.++|.+.+
T Consensus 248 gI~~vPT-~~i--~G~~---~~G~~~~~~L~~~l 275 (291)
T 3kp9_A 248 GITSYPT-WII--NGRT---YTGVRSLEALAVAS 275 (291)
T ss_dssp TCCSTTE-EEE--TTEE---EESCCCHHHHHHHT
T ss_pred CCcccCe-EEE--CCEE---ecCCCCHHHHHHHH
Confidence 5899999 555 7863 77988888877655
No 284
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.43 E-value=5.1 Score=24.83 Aligned_cols=53 Identities=13% Similarity=0.144 Sum_probs=28.7
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEEE
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVDR 104 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~~ 104 (125)
..++.++. +.++.|..+. +|.+. ....+...+... + ++..+|+.| + +|+.+..
T Consensus 41 ~~~~~~L~-~~~i~~~~vd-id~~~-~~~~~~~~l~~~----~--g~~~vP~l~-i--~G~~igg 93 (130)
T 2cq9_A 41 TMAKKLFH-DMNVNYKVVE-LDLLE-YGNQFQDALYKM----T--GERTVPRIF-V--NGTFIGG 93 (130)
T ss_dssp HHHHHHHH-HHTCCCEEEE-TTTST-THHHHHHHHHHH----H--SSCCSSEEE-E--TTEEEEE
T ss_pred HHHHHHHH-HcCCCcEEEE-CcCCc-CcHHHHHHHHHH----h--CCCCcCEEE-E--CCEEEcC
Confidence 67888885 5689887663 34321 111111122221 3 367789875 4 6777654
No 285
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=50.41 E-value=31 Score=20.44 Aligned_cols=56 Identities=9% Similarity=0.052 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCc-ccceeEeeccC
Q 033221 4 SNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKS-EFPIFEKIDVN 63 (125)
Q Consensus 4 ~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~-~fpv~~~~D~~ 63 (125)
..+..|.++.++|+-. ..|||.+.+-.+ .+....+.+++|++ +..- ..||.. .|+.
T Consensus 38 ~~~~~l~~li~e~~v~-~iVvGlP~~mdG-t~~~~~~~~~~f~~-~L~~~~lpV~~-~DER 94 (98)
T 1iv0_A 38 EDVEALLDFVRREGLG-KLVVGLPLRTDL-KESAQAGKVLPLVE-ALRARGVEVEL-WDER 94 (98)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEECCCCCCS-SSCCCSSTTHHHHH-HHHHTTCEEEE-ECCS
T ss_pred HHHHHHHHHHHHcCCC-EEEEeeccCCCC-CcCHHHHHHHHHHH-HHhcCCCCEEE-ECCC
Confidence 4467888999999865 568899875322 22234456677763 2211 567664 4653
No 286
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=49.50 E-value=26 Score=18.98 Aligned_cols=33 Identities=6% Similarity=-0.179 Sum_probs=22.0
Q ss_pred eeeEEECCCCcEEEEEcC----CCChhHHHHHHHHhh
Q 033221 90 FAKFLVDKNGQVVDRYYP----TTSLLSLEHDIKKLL 122 (125)
Q Consensus 90 PttflId~~G~v~~~~~G----~~~~~~l~~~I~~ll 122 (125)
|-++-||++|++..-..+ .++.++|...+..++
T Consensus 4 ~i~v~I~~dG~~~~~~~~~~~~~v~~~~L~~~l~~~~ 40 (74)
T 2jwk_A 4 PVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEF 40 (74)
T ss_dssp CEEEEECSSSCEEEEETTEEEEEECHHHHHHHHHHHH
T ss_pred CEEEEEecCccEEEecCCCcCcccCHHHHHHHHHHHH
Confidence 567889999987543212 356677887777664
No 287
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=49.46 E-value=11 Score=21.81 Aligned_cols=52 Identities=6% Similarity=0.171 Sum_probs=27.1
Q ss_pred HHHHHHHHhhCCcc---cceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEE
Q 033221 40 DQIADFVCTRFKSE---FPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 40 ~~~~~f~~~~~~~~---fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~ 103 (125)
..++.+++ +.++. |..+. +|.+.. ...+...+... + ++..+|+.| + +|+.+.
T Consensus 26 ~~~~~~L~-~~~~~~~~~~~vd-i~~~~~-~~~~~~~l~~~----~--g~~~vP~i~-~--~g~~i~ 80 (105)
T 1kte_A 26 RKTQELLS-QLPFKEGLLEFVD-ITATSD-TNEIQDYLQQL----T--GARTVPRVF-I--GKECIG 80 (105)
T ss_dssp HHHHHHHH-HSCBCTTSEEEEE-GGGSTT-HHHHHHHHHHH----H--SCCCSCEEE-E--TTEEEE
T ss_pred HHHHHHHH-HcCCCCCccEEEE-ccCCCC-HHHHHHHHHHH----h--CCCCcCeEE-E--CCEEEe
Confidence 57888894 67888 54442 333211 01122233321 3 366789864 4 576654
No 288
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=49.20 E-value=30 Score=18.60 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=26.2
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEE
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV 102 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~ 102 (125)
..++.+++ +.++.|-.+. +|.+ .. ....+.+. + ++..+|+.| + +|+.+
T Consensus 15 ~~~~~~l~-~~~i~~~~~~-i~~~-~~---~~~~~~~~----~--~~~~vP~l~-~--~g~~i 62 (82)
T 1fov_A 15 HRAKALLS-SKGVSFQELP-IDGN-AA---KREEMIKR----S--GRTTVPQIF-I--DAQHI 62 (82)
T ss_dssp HHHHHHHH-HHTCCCEEEE-CTTC-SH---HHHHHHHH----H--SSCCSCEEE-E--TTEEE
T ss_pred HHHHHHHH-HCCCCcEEEE-CCCC-HH---HHHHHHHH----h--CCCCcCEEE-E--CCEEE
Confidence 57788885 5689887663 3322 11 11222221 2 356679875 4 67654
No 289
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=47.01 E-value=15 Score=24.26 Aligned_cols=37 Identities=19% Similarity=0.101 Sum_probs=22.8
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCCh------hHHHHHHHHhhcc
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSL------LSLEHDIKKLLGL 124 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~------~~l~~~I~~ll~~ 124 (125)
+|.++|| |+| +|+.+-...|..+. +.+.+.|+.|+.+
T Consensus 148 gv~gtPt-fvv--nG~~~v~~~~~~~~~~~~~~~~~~~~i~~L~~k 190 (191)
T 3l9s_A 148 QLQGVPA-MFV--NGKYQINPQGMDTSSMDVFVQQYADTVKYLVDK 190 (191)
T ss_dssp TCCSSSE-EEE--TTTEEECGGGSCCSSHHHHHHHHHHHHHHHHHC
T ss_pred CCcccCE-EEE--CCEEEECccccCCccchhhHHHHHHHHHHHHcC
Confidence 4888997 456 47655443344443 4677777777653
No 290
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=44.68 E-value=39 Score=20.03 Aligned_cols=51 Identities=14% Similarity=0.189 Sum_probs=28.2
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEE
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVV 102 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~ 102 (125)
..++.++. ++++.|..+. +|.... ...+-..+... . +...+|+.|+ +|+.+
T Consensus 31 ~~ak~~L~-~~~i~~~~~d-vd~~~~-~~~~~~~l~~~----~--g~~tvP~vfi---~g~~i 81 (114)
T 3h8q_A 31 TRVKELFS-SLGVECNVLE-LDQVDD-GARVQEVLSEI----T--NQKTVPNIFV---NKVHV 81 (114)
T ss_dssp HHHHHHHH-HTTCCCEEEE-TTTSTT-HHHHHHHHHHH----H--SCCSSCEEEE---TTEEE
T ss_pred HHHHHHHH-HcCCCcEEEE-ecCCCC-hHHHHHHHHHH----h--CCCccCEEEE---CCEEE
Confidence 67889995 6899998763 443211 11122233221 2 2456798776 67654
No 291
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A
Probab=44.66 E-value=12 Score=22.94 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=15.7
Q ss_pred cceeeEEECCCCcEEEEE
Q 033221 88 WNFAKFLVDKNGQVVDRY 105 (125)
Q Consensus 88 ~~PttflId~~G~v~~~~ 105 (125)
..|..+++|++|+|++..
T Consensus 10 lFPfHlvfd~~~~I~q~G 27 (115)
T 2p08_A 10 AFPFHFAFSRNREIVQTG 27 (115)
T ss_dssp HCTTCEEECTTCBEEEEC
T ss_pred hCCeEEEECCCCEEEEec
Confidence 359999999999999975
No 292
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=44.28 E-value=33 Score=21.74 Aligned_cols=57 Identities=16% Similarity=0.203 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhC--CcccceeEeeccCCC
Q 033221 5 NYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRF--KSEFPIFEKIDVNGE 65 (125)
Q Consensus 5 e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~--~~~fpv~~~~D~~g~ 65 (125)
.+..|.++.++|+-. ..|||.+.+-.+ .+....+.+++|++ +. .+..||.. .|+..+
T Consensus 41 ~~~~l~~li~e~~v~-~iVvGlP~~mdG-t~~~~~~~~~~f~~-~L~~~~~lpV~~-~DERlT 99 (138)
T 1nu0_A 41 DWNIIERLLKEWQPD-EIIVGLPLNMDG-TEQPLTARARKFAN-RIHGRFGVEVKL-HDERLS 99 (138)
T ss_dssp CHHHHHHHHHHHCCS-EEEEEEEECTTS-CBCHHHHHHHHHHH-HHHHHHCCCEEE-EEEECC
T ss_pred HHHHHHHHHHHcCCC-EEEEecccCCCc-CcCHHHHHHHHHHH-HHHHHhCCCEEE-EcCCcC
Confidence 367899999999865 568899875322 22223466778873 33 23457654 576543
No 293
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=44.13 E-value=6.6 Score=25.02 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=28.2
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEE
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~ 103 (125)
..++.++. +.++.|..+. +|.+. ....+...+... + ++..+|+.| + +|+.+.
T Consensus 63 ~~~k~~L~-~~~i~~~~vd-Id~~~-~~~~~~~~L~~~----~--g~~tvP~if-i--~G~~ig 114 (146)
T 2ht9_A 63 TMAKKLFH-DMNVNYKVVE-LDLLE-YGNQFQDALYKM----T--GERTVPRIF-V--NGTFIG 114 (146)
T ss_dssp HHHHHHHH-HHTCCCEEEE-GGGCT-THHHHHHHHHHH----H--SCCCSCEEE-E--TTEEEE
T ss_pred HHHHHHHH-HcCCCeEEEE-CccCc-CCHHHHHHHHHH----h--CCCCcCeEE-E--CCEEEe
Confidence 57788885 5699887763 44331 111111122221 3 367789875 4 677654
No 294
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=43.84 E-value=10 Score=21.84 Aligned_cols=16 Identities=31% Similarity=0.316 Sum_probs=12.9
Q ss_pred eeeEEECCCCcEEEEE
Q 033221 90 FAKFLVDKNGQVVDRY 105 (125)
Q Consensus 90 PttflId~~G~v~~~~ 105 (125)
=-.|.||++|+|....
T Consensus 28 ~v~~~i~~~G~v~~~~ 43 (90)
T 1u07_A 28 KVKFDVTPDGRVDNVQ 43 (90)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 3579999999997754
No 295
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=42.25 E-value=58 Score=20.14 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=27.9
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
|.-.|.+.+|+|+..-.+..+....++-|+.+.
T Consensus 66 ~yF~Lka~NgqvIg~Se~Y~s~~~~~~gI~sVk 98 (118)
T 2k49_A 66 PYFNLKAANHQIIGTSQMYSSTAARDNGIKSVM 98 (118)
T ss_dssp EEEEEECTTCCEEEEBCCCSSHHHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEcCCcCCHHHHHHHHHHHH
Confidence 455889999999999888888888888888764
No 296
>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A*
Probab=42.02 E-value=30 Score=26.04 Aligned_cols=75 Identities=13% Similarity=0.195 Sum_probs=48.2
Q ss_pred CChhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 1 MTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 1 ~~~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
|+++.+|...+|+++|-.+ +.+.-+- +.++++.|+..+-++.|-.+ .+.+|....
T Consensus 231 m~~~Dv~~v~~Ll~~yl~~-f~l~~~f----------~~ee~~Hw~lp~~~Vi~syV--ve~~~~itd------------ 285 (385)
T 4b14_A 231 MKKKDVEGVHKLLGSYLEQ-FNLYAVF----------TKEEIAHWFLPIENVIYTYV--NEENGKIKD------------ 285 (385)
T ss_dssp CCGGGHHHHHHHHHHHHTT-SSEEECC----------CHHHHHHHHSCBTTTEEEEE--EEETTEEEE------------
T ss_pred CcHhhHHHHHHHHHHHHhc-CCeeEec----------CHHHeeeeeecCCCeEEEEE--ECCCCcEeE------------
Confidence 6889999999999999875 6654432 47888888744557777655 344554433
Q ss_pred CCCCCcccceeeEEECCCCcEE
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVV 102 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~ 102 (125)
++ .--.+|+|++=++....+
T Consensus 286 f~--SFY~lps~vi~~~k~~~l 305 (385)
T 4b14_A 286 MI--SFYSLPSQILGNDKYSTL 305 (385)
T ss_dssp EE--EEEECCEEESSCSSCSEE
T ss_pred EE--EEEEcceeeeCCCCccee
Confidence 11 123468888655555443
No 297
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=40.23 E-value=33 Score=19.91 Aligned_cols=17 Identities=18% Similarity=0.184 Sum_probs=13.5
Q ss_pred HHHHHHHHhhCCccccee
Q 033221 40 DQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~ 57 (125)
..++.+++ +.++.|-.+
T Consensus 30 ~~ak~~L~-~~~i~y~~i 46 (99)
T 3qmx_A 30 MRALALLK-RKGVEFQEY 46 (99)
T ss_dssp HHHHHHHH-HHTCCCEEE
T ss_pred HHHHHHHH-HCCCCCEEE
Confidence 67888995 679998776
No 298
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=39.63 E-value=40 Score=24.83 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=25.6
Q ss_pred eEEECCCCcEEEEEc-----CCCChhHHHHHHHHhhcc
Q 033221 92 KFLVDKNGQVVDRYY-----PTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 92 tflId~~G~v~~~~~-----G~~~~~~l~~~I~~ll~~ 124 (125)
.|.||++|+|-.=+. ...+.+++++.|.+.|++
T Consensus 97 ~~~V~~dG~I~~P~iG~v~vaG~T~~e~~~~I~~~L~~ 134 (359)
T 2j58_A 97 GNWVNSDGTIFYPYIGKVQVAGKTVSQVRQDITSRLTT 134 (359)
T ss_dssp SEECCTTSEEEETTTEEEECTTCCHHHHHHHHHHHHTT
T ss_pred CcEECCCCeEEecccceEEECCCCHHHHHHHHHHHHHH
Confidence 478999999976443 456788999999887753
No 299
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=39.46 E-value=35 Score=21.64 Aligned_cols=17 Identities=24% Similarity=0.366 Sum_probs=13.3
Q ss_pred ceeeEEECCCCcEEEEE
Q 033221 89 NFAKFLVDKNGQVVDRY 105 (125)
Q Consensus 89 ~PttflId~~G~v~~~~ 105 (125)
.-..+|+|++|.|+...
T Consensus 26 v~~~~lvd~dG~vIa~~ 42 (136)
T 3t12_B 26 ARYALLIDRKGFVLAHK 42 (136)
T ss_dssp CSEEEEEETTC-CCEEE
T ss_pred CeEEEEEcCCCCEEEEe
Confidence 35679999999999876
No 300
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=39.38 E-value=38 Score=18.80 Aligned_cols=18 Identities=17% Similarity=0.265 Sum_probs=14.0
Q ss_pred HHHHHHHHhhCCcccceeE
Q 033221 40 DQIADFVCTRFKSEFPIFE 58 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~ 58 (125)
..++++++ ++++.|..+.
T Consensus 18 ~~ak~~L~-~~gi~y~~id 35 (87)
T 1aba_A 18 DNAKRLLT-VKKQPFEFIN 35 (87)
T ss_dssp HHHHHHHH-HTTCCEEEEE
T ss_pred HHHHHHHH-HcCCCEEEEE
Confidence 57888995 6799998763
No 301
>1wz3_A Autophagy 12B, ATG12B, APG12B; ubiquitin-fold, plant protein; 1.80A {Arabidopsis thaliana} SCOP: d.15.1.7
Probab=38.41 E-value=34 Score=20.35 Aligned_cols=20 Identities=20% Similarity=0.655 Sum_probs=16.8
Q ss_pred HHHHHHHhccCCeEEEEeeC
Q 033221 9 LSQLYDKYKDQGLEILAFPC 28 (125)
Q Consensus 9 l~~l~~~y~~~g~~vvgv~~ 28 (125)
+.+||+.|++.|+-+|.-+.
T Consensus 72 m~~LY~~~kdDGfLyi~Ys~ 91 (96)
T 1wz3_A 72 VIDLYNNFGFDGKLVVNYAC 91 (96)
T ss_dssp HHHHHHHHCBTTBEEEEEES
T ss_pred HHHHHHHhCCCCEEEEEEeC
Confidence 68999999999987777664
No 302
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=37.92 E-value=35 Score=20.38 Aligned_cols=28 Identities=18% Similarity=0.236 Sum_probs=20.3
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
|.. +|.++| .+.|.++++++.+.|++.+
T Consensus 63 P~v-~V~P~~----~~y~~vt~e~v~~il~~~l 90 (110)
T 1m2d_A 63 PVV-VVYPDG----VWYGQVKPEDVDEIVEKHL 90 (110)
T ss_dssp SCE-EEETTT----EEECSCCGGGHHHHHHHTT
T ss_pred CEE-EEEeCC----EEEecCCHHHHHHHHHHHH
Confidence 654 454777 3457889999999998854
No 303
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=37.76 E-value=23 Score=25.72 Aligned_cols=34 Identities=15% Similarity=0.407 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHH
Q 033221 6 YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVC 47 (125)
Q Consensus 6 ~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~ 47 (125)
+|.+.+|.+.++++|+.|+-|+.. ..+-++.|++
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas--------~~~~v~~~a~ 178 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAA--------HEELVRMVAA 178 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCC--------cHHHHHHHHh
Confidence 688899999999999999999852 2455677773
No 304
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=37.64 E-value=27 Score=21.76 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=13.9
Q ss_pred eeeEEECCCCcEEEEE
Q 033221 90 FAKFLVDKNGQVVDRY 105 (125)
Q Consensus 90 PttflId~~G~v~~~~ 105 (125)
-+|.|+|++|+.++.+
T Consensus 100 ~~t~L~n~~Gee~A~~ 115 (123)
T 3hn9_A 100 VKVILKNSQGEEVAQR 115 (123)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cEEEEECCCCCEEEEE
Confidence 4789999999999876
No 305
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=37.53 E-value=38 Score=19.63 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=27.1
Q ss_pred HHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEE
Q 033221 40 DQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~ 103 (125)
..++.+++ +.++.|-.+. +|.+ ..+...+... + +...+|+.| | +|+.+.
T Consensus 36 ~~~~~~L~-~~~i~~~~vd-i~~~----~~~~~~l~~~----~--g~~~vP~v~-i--~g~~ig 84 (105)
T 2yan_A 36 KQILEILN-STGVEYETFD-ILED----EEVRQGLKAY----S--NWPTYPQLY-V--KGELVG 84 (105)
T ss_dssp HHHHHHHH-HHTCCCEEEE-GGGC----HHHHHHHHHH----H--TCCSSCEEE-E--TTEEEE
T ss_pred HHHHHHHH-HCCCCeEEEE-CCCC----HHHHHHHHHH----H--CCCCCCeEE-E--CCEEEe
Confidence 67888995 5699887663 3332 1122223221 2 246679865 5 576543
No 306
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=37.32 E-value=48 Score=20.36 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=23.6
Q ss_pred HHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCccccee
Q 033221 8 ELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 8 ~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~ 57 (125)
+|.+|.+.....|+.+|||... +.+..++.+. . ..+|++
T Consensus 62 dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a~-~--~GLp~l 100 (120)
T 3ghf_A 62 NWPELHKIVTSTGLRIIGVSGC--------KDASLKVEID-R--MGLPLL 100 (120)
T ss_dssp CHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHHH-H--HTCCEE
T ss_pred HHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHHH-H--CCCCcc
Confidence 3555556666678999999742 2344566663 3 455666
No 307
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=37.14 E-value=25 Score=24.01 Aligned_cols=34 Identities=6% Similarity=0.059 Sum_probs=22.9
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+|..+||..++ +| ..++.|......+...+..++
T Consensus 83 gv~~~Pt~~i~--~g--~~~~~G~~~~~~l~~fv~~~l 116 (243)
T 2hls_A 83 KVERVPTVAFL--GG--EVRWTGIPAGEEIRALVEVIM 116 (243)
T ss_dssp TCCSSSEEEET--TT--TEEEESCCCTTHHHHHHHHHH
T ss_pred CCCcCCEEEEE--CC--ceeEcCCCcHHHHHHHHHHHH
Confidence 47889987777 46 455667666667766666554
No 308
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A*
Probab=36.98 E-value=50 Score=24.83 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=49.0
Q ss_pred CChhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcccceeEeeccCCCccchHHHHHHhCCCC
Q 033221 1 MTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIFEKIDVNGEHASPLYKLLKSGKWG 80 (125)
Q Consensus 1 ~~~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~~~~D~~g~~~~~~~~~l~~~~~~ 80 (125)
|+.+.+|...+|.++|-.+ +.+.-+- +.++++.|+.-+-++.+..+. -+.+|....
T Consensus 228 m~~~Dv~~v~~Ll~~yl~~-f~l~~~f----------t~eev~Hw~lp~~~Vi~syVv-e~~~g~ITD------------ 283 (383)
T 3iu1_A 228 METKDIPVVHQLLTRYLKQ-FHLTPVM----------SQEEVEHWFYPQENIIDTFVV-ENANGEVTD------------ 283 (383)
T ss_dssp CCGGGHHHHHHHHHHHGGG-SSEEEEC----------CHHHHHHHHSCC-CCEEEEEE-ECTTSCEEE------------
T ss_pred CchhhHHHHHHHHHHHHHh-CCCeeeC----------CHHHhhhhcccCCCeEEEEEE-ECCCCcEee------------
Confidence 6788999999999999866 6654432 478888888544577765542 233455443
Q ss_pred CCCCCcccceeeEEECCCCcEEE
Q 033221 81 IFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 81 ~~g~~i~~~PttflId~~G~v~~ 103 (125)
|. .--.+|+|++=++..+.+.
T Consensus 284 -f~-SFY~Lpstvl~~~~~~~l~ 304 (383)
T 3iu1_A 284 -FL-SFYTLPSTIMNHPTHKSLK 304 (383)
T ss_dssp -EE-EEEECCEEETTCSSCCEEC
T ss_pred -EE-EEEEccceecCCCCcceee
Confidence 10 1235688887666655443
No 309
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=36.09 E-value=24 Score=23.31 Aligned_cols=30 Identities=20% Similarity=0.220 Sum_probs=20.4
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
+|.++|| |+|| |+ .+.|....+.+++.|..
T Consensus 170 Gv~GvPt-fvv~--g~---~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 170 GIFGSPF-FLVD--DE---PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp TCCSSSE-EEET--TE---EEESGGGHHHHHHHHHT
T ss_pred CCCcCCE-EEEC--CE---EEecCCCHHHHHHHHhc
Confidence 4778897 5564 55 45687777777777653
No 310
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=35.32 E-value=58 Score=17.95 Aligned_cols=17 Identities=18% Similarity=0.264 Sum_probs=13.2
Q ss_pred HHHHHHHHhhCCccccee
Q 033221 40 DQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~ 57 (125)
..++.+++ +.++.|-.+
T Consensus 20 ~~~~~~L~-~~~i~~~~~ 36 (92)
T 2khp_A 20 ARAKALLA-RKGAEFNEI 36 (92)
T ss_dssp HHHHHHHH-HTTCCCEEE
T ss_pred HHHHHHHH-HcCCCcEEE
Confidence 57888895 679998776
No 311
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=35.30 E-value=26 Score=21.45 Aligned_cols=20 Identities=5% Similarity=0.315 Sum_probs=17.3
Q ss_pred CCHHHHHHHHHhhCCccccee
Q 033221 37 GSNDQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 37 ~~~~~~~~f~~~~~~~~fpv~ 57 (125)
++.|++.+|++ ++|+.|-|.
T Consensus 67 ~skE~AiayAe-k~G~~y~V~ 86 (108)
T 2lju_A 67 TTRELAIAYAV-AHKIDYTVL 86 (108)
T ss_dssp SSHHHHHHHHH-HTTCEEEEE
T ss_pred CCHHHHHHHHH-HcCCEEEEe
Confidence 47899999995 789999987
No 312
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=34.93 E-value=83 Score=19.64 Aligned_cols=36 Identities=8% Similarity=-0.188 Sum_probs=25.1
Q ss_pred cceeeEEECC--CCcEEEEEc-CCCChhHHHHHHHHhhcc
Q 033221 88 WNFAKFLVDK--NGQVVDRYY-PTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 88 ~~PttflId~--~G~v~~~~~-G~~~~~~l~~~I~~ll~~ 124 (125)
-+|+..+++. +++ .+... +.++.+.|++-++..++.
T Consensus 90 ~~P~v~i~~~~~~~~-Ky~~~~~~~t~~~i~~Fv~d~l~G 128 (147)
T 3bj5_A 90 ECPAVRLITLEEEMT-KYKPESEELTAERITEFCHRFLEG 128 (147)
T ss_dssp GCSEEEEEECSSSCE-EECCSCCCCCHHHHHHHHHHHHTT
T ss_pred cCCEEEEEecccccc-cCCCCcccCCHHHHHHHHHHHHcC
Confidence 4798888875 343 34433 788888999998887753
No 313
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB: 2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Probab=34.61 E-value=19 Score=23.31 Aligned_cols=15 Identities=33% Similarity=0.428 Sum_probs=12.5
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 62 igyhflI~~dG~I~e 76 (163)
T 1sk4_A 62 IGYHFLVGQDGGVYE 76 (163)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 366899999999865
No 314
>1yck_A Peptidoglycan recognition protein; PGRP-S, innate immunity, pattern recognition proteins, immune syste; 1.70A {Homo sapiens} SCOP: d.118.1.1 PDB: 3mu9_A* 2r2k_A 2z9n_A* 2r90_A* 3c93_A* 3cg9_A* 3cor_A* 3cxa_A* 3c2x_A* 3ng4_A* 3nkw_A* 3nno_A* 3nw3_A* 3o4k_A* 3ogx_A* 3olk_A* 3qj1_A* 3qs0_A* 3qv4_A* 3rt4_A* ...
Probab=34.48 E-value=19 Score=23.68 Aligned_cols=15 Identities=27% Similarity=0.419 Sum_probs=12.6
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 72 igyhflI~~dG~I~e 86 (175)
T 1yck_A 72 VGYNFLIGEDGLVYE 86 (175)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 367899999999865
No 315
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=34.41 E-value=25 Score=22.67 Aligned_cols=28 Identities=21% Similarity=0.182 Sum_probs=19.8
Q ss_pred ee-eEEECCCCcEEEEEcCCCChhHHHHHHHH
Q 033221 90 FA-KFLVDKNGQVVDRYYPTTSLLSLEHDIKK 120 (125)
Q Consensus 90 Pt-tflId~~G~v~~~~~G~~~~~~l~~~I~~ 120 (125)
|| .+|.|.+|++..+-. +...|++.|+.
T Consensus 41 ptLvlIYDe~G~lLW~qr---~vP~le~~I~~ 69 (148)
T 3bqa_A 41 PTMTLIYDENGQLLWAQR---DVPWLMKMIQP 69 (148)
T ss_dssp SCEEEEECTTSCEEEESS---CCHHHHHHSCG
T ss_pred CeEEEEEcCCCcEEEecC---cchHHHhhcCH
Confidence 77 677899999999852 22347777654
No 316
>2cb3_A Peptidoglycan-recognition protein-LE; PGRP, tracheal cytotoxin, innate immunity, immune system; HET: MLD; 2.40A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=33.80 E-value=20 Score=23.57 Aligned_cols=15 Identities=27% Similarity=0.432 Sum_probs=12.7
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 68 igyhflI~~dG~I~e 82 (175)
T 2cb3_A 68 IAYNFLVGCDGNIYE 82 (175)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 467899999999865
No 317
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=33.36 E-value=19 Score=21.52 Aligned_cols=14 Identities=21% Similarity=0.389 Sum_probs=11.9
Q ss_pred eEEECCCCcEEEEE
Q 033221 92 KFLVDKNGQVVDRY 105 (125)
Q Consensus 92 tflId~~G~v~~~~ 105 (125)
-.|||++|+|++--
T Consensus 51 ItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 51 ASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEETTSCEEEET
T ss_pred EEEECCCCcEEEeC
Confidence 47899999999864
No 318
>2f2l_X Peptidoglycan recognition protein-LC isoform LCX; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=33.04 E-value=21 Score=23.29 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=12.5
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 64 igyhflI~~dG~I~e 78 (167)
T 2f2l_X 64 IGYNFLVGGDGRVYE 78 (167)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 367899999999865
No 319
>1lba_A T7 lysozyme; hydrolase(acting on linear amides); 2.20A {Enterobacteria phage T7} SCOP: d.118.1.1 PDB: 1aro_L
Probab=32.53 E-value=22 Score=22.53 Aligned_cols=14 Identities=21% Similarity=0.460 Sum_probs=11.6
Q ss_pred eeeEEECCCCcEEE
Q 033221 90 FAKFLVDKNGQVVD 103 (125)
Q Consensus 90 PttflId~~G~v~~ 103 (125)
...|+|+++|+|..
T Consensus 41 syHflI~~dG~I~q 54 (146)
T 1lba_A 41 GYHFIIKRDGTVEA 54 (146)
T ss_dssp SCSEEECTTSCEEE
T ss_pred CceEEECCCCEEEE
Confidence 56799999999865
No 320
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=32.29 E-value=82 Score=19.80 Aligned_cols=33 Identities=21% Similarity=0.097 Sum_probs=26.9
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+.-.|++.+|+|+..-.+..+....+..|+.+.
T Consensus 82 ~~f~Lka~NgqvIa~Se~Y~ska~a~~gI~sVk 114 (130)
T 2k8e_A 82 FYFNLKAANHQIIGSSQMYATAQSRETGIASVK 114 (130)
T ss_dssp EEEEEECTTSCEEEECCCBSSHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHH
Confidence 344689999999998888888888888887764
No 321
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=31.64 E-value=37 Score=21.80 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=14.4
Q ss_pred eeeEEECCCCcEEEEEc
Q 033221 90 FAKFLVDKNGQVVDRYY 106 (125)
Q Consensus 90 PttflId~~G~v~~~~~ 106 (125)
-+|.|+|++|+.++.+.
T Consensus 113 ~~T~L~n~~GEevA~~~ 129 (144)
T 3jt0_A 113 VKVILKNSQGEEVAQRS 129 (144)
T ss_dssp CEEEEECTTSCEEEEEE
T ss_pred cEEEEECCCCCEEEEEE
Confidence 46899999999998764
No 322
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=31.16 E-value=73 Score=18.67 Aligned_cols=40 Identities=5% Similarity=0.101 Sum_probs=23.2
Q ss_pred HHhccCCeEEEEeeCCCCCCCCCCC--HHHHHHHHHhhCCcccceeE
Q 033221 14 DKYKDQGLEILAFPCNQFGEEEPGS--NDQIADFVCTRFKSEFPIFE 58 (125)
Q Consensus 14 ~~y~~~g~~vvgv~~~~~~~~e~~~--~~~~~~f~~~~~~~~fpv~~ 58 (125)
+.-+...+.|..-++.+ .+.- -..+++++. +++++|-.+.
T Consensus 13 ~~i~~~~Vvvy~k~t~~----~p~Cp~C~~ak~~L~-~~gi~~~~~d 54 (109)
T 3ipz_A 13 KLVNSEKVVLFMKGTRD----FPMCGFSNTVVQILK-NLNVPFEDVN 54 (109)
T ss_dssp HHHTSSSEEEEESBCSS----SBSSHHHHHHHHHHH-HTTCCCEEEE
T ss_pred HHHccCCEEEEEecCCC----CCCChhHHHHHHHHH-HcCCCcEEEE
Confidence 33344457776654211 0112 267889995 6799998763
No 323
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Probab=30.85 E-value=24 Score=23.28 Aligned_cols=15 Identities=33% Similarity=0.326 Sum_probs=12.6
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 71 igyhflI~~dG~I~e 85 (180)
T 2xz4_A 71 IGYNFLVGGDGQIYV 85 (180)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCceEEECCCCEEEE
Confidence 367899999999865
No 324
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=30.65 E-value=78 Score=19.98 Aligned_cols=45 Identities=9% Similarity=0.022 Sum_probs=29.4
Q ss_pred HHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCccccee
Q 033221 7 IELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 7 p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~fpv~ 57 (125)
|...+.-++.+++|..|+-++.. .......+..|++ ++++.|+.+
T Consensus 27 ~~~~~al~~l~~~G~~iii~TgR-----~~~~~~~~~~~l~-~~gi~~~~I 71 (142)
T 2obb_A 27 PFAVETLKLLQQEKHRLILWSVR-----EGELLDEAIEWCR-ARGLEFYAA 71 (142)
T ss_dssp TTHHHHHHHHHHTTCEEEECCSC-----CHHHHHHHHHHHH-TTTCCCSEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC-----CcccHHHHHHHHH-HcCCCeEEE
Confidence 44455566777789877665532 1112467788884 789999877
No 325
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL, pattern recognition, PGRP, glycoprotein, immune response, secreted,; 1.50A {Drosophila melanogaster}
Probab=30.49 E-value=25 Score=22.96 Aligned_cols=15 Identities=27% Similarity=0.412 Sum_probs=12.4
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 65 igyhflI~~dG~I~~ 79 (169)
T 2rkq_A 65 IGYHYLIGGNGKVYE 79 (169)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCCcEEECCCCEEEE
Confidence 366799999999866
No 326
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=30.11 E-value=24 Score=21.55 Aligned_cols=20 Identities=15% Similarity=0.317 Sum_probs=17.0
Q ss_pred CCHHHHHHHHHhhCCccccee
Q 033221 37 GSNDQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 37 ~~~~~~~~f~~~~~~~~fpv~ 57 (125)
++.|++.+|++ ++|+.|-|.
T Consensus 59 ~skE~AiayAe-k~G~~y~V~ 78 (106)
T 2jya_A 59 ETQEQAEAYAQ-RKGIEYRVI 78 (106)
T ss_dssp SSHHHHHHHHH-HHTCEEEEC
T ss_pred CCHHHHHHHHH-HcCCEEEEe
Confidence 47899999995 679999887
No 327
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=30.01 E-value=22 Score=21.64 Aligned_cols=16 Identities=13% Similarity=0.202 Sum_probs=12.6
Q ss_pred eeeEEECCCCcEEEEE
Q 033221 90 FAKFLVDKNGQVVDRY 105 (125)
Q Consensus 90 PttflId~~G~v~~~~ 105 (125)
--.+++|++|.+++..
T Consensus 28 ~G~iIln~~G~pIrSt 43 (106)
T 2hz5_A 28 QGIIVVNTEGIPIKST 43 (106)
T ss_dssp EEEEEECTTCCEEEES
T ss_pred eEEEEEcCCCCeEEEe
Confidence 3468999999988754
No 328
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=29.99 E-value=21 Score=23.14 Aligned_cols=15 Identities=7% Similarity=0.158 Sum_probs=12.3
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|+|+++|+|..
T Consensus 70 IGYnFlI~~dG~Vye 84 (150)
T 2xz8_A 70 INYNFVAAGDENIYE 84 (150)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred CCCcEEEcCCCeEEE
Confidence 377899999998844
No 329
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=29.96 E-value=40 Score=23.38 Aligned_cols=17 Identities=29% Similarity=0.284 Sum_probs=13.8
Q ss_pred eeeEEECCCCcEEEEEc
Q 033221 90 FAKFLVDKNGQVVDRYY 106 (125)
Q Consensus 90 PttflId~~G~v~~~~~ 106 (125)
=-.|.||++|+|.....
T Consensus 167 ~V~f~Id~dG~V~~v~V 183 (229)
T 2grx_C 167 KVKFDVTPDGRVDNVQI 183 (229)
T ss_dssp CEEEECCTTSCCEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 45799999999988654
No 330
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=29.82 E-value=61 Score=18.99 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=17.3
Q ss_pred HHHHHHHHhccCCeEEEEeeC
Q 033221 8 ELSQLYDKYKDQGLEILAFPC 28 (125)
Q Consensus 8 ~l~~l~~~y~~~g~~vvgv~~ 28 (125)
.+.+||+.|+..|+-+|.-+.
T Consensus 66 ~~~~Ly~~~k~DGfLyv~Ys~ 86 (91)
T 4gdk_A 66 EVGTLYECFGSDGKLVLHYCK 86 (91)
T ss_dssp BHHHHHHHHCBTTEEEEEEES
T ss_pred HHHHHHHHhCCCCEEEEEEeC
Confidence 368999999988988887664
No 331
>1sxr_A Peptidoglycan recognition protein SA CG11709-PA; pattern recognition receptor, innate immunity pathway, immune system; 1.56A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=29.24 E-value=26 Score=23.24 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.5
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 74 IgyhflI~~dG~I~e 88 (183)
T 1sxr_A 74 ISYNFLIGNDGIVYE 88 (183)
T ss_dssp CSSSEEECTTCCEEE
T ss_pred CCceEEECCCCEEEE
Confidence 467899999999865
No 332
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=29.21 E-value=33 Score=20.21 Aligned_cols=17 Identities=29% Similarity=0.436 Sum_probs=13.3
Q ss_pred eeeEEECCCCcEEEEEc
Q 033221 90 FAKFLVDKNGQVVDRYY 106 (125)
Q Consensus 90 PttflId~~G~v~~~~~ 106 (125)
=-.|.||++|+|.....
T Consensus 43 ~v~f~I~~~G~v~~~~v 59 (106)
T 2k9k_A 43 TLSFTIDTTGKAVDINV 59 (106)
T ss_dssp EEEEEEETTTEEEEEEE
T ss_pred EEEEEECCCCcEEEEEE
Confidence 45799999999977543
No 333
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=28.34 E-value=44 Score=21.30 Aligned_cols=15 Identities=13% Similarity=0.164 Sum_probs=12.9
Q ss_pred eeEEECCCCcEEEEE
Q 033221 91 AKFLVDKNGQVVDRY 105 (125)
Q Consensus 91 ttflId~~G~v~~~~ 105 (125)
..++||++|+|+.++
T Consensus 85 DiiFid~dg~Vv~i~ 99 (140)
T 3m7a_A 85 DIIFVGLDRRVMNIA 99 (140)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred EEEEECCCCeEEEEE
Confidence 368899999999985
No 334
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=27.95 E-value=41 Score=23.35 Aligned_cols=16 Identities=13% Similarity=0.555 Sum_probs=13.0
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 112 s~~~i~~~G~i~~~y~ 127 (291)
T 1f89_A 112 TSIIFNEDGKLIDKHR 127 (291)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcEEeEEe
Confidence 6799999999877653
No 335
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=27.87 E-value=42 Score=23.41 Aligned_cols=16 Identities=38% Similarity=0.762 Sum_probs=13.2
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 114 s~~~i~~~G~i~~~y~ 129 (281)
T 3p8k_A 114 TAFSVNKSGQLINEYD 129 (281)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCeEEEEEe
Confidence 6799999999987653
No 336
>3ep1_A PGRP-HD - peptidoglycan recognition protein homologue; immune system, thermophIle, model system; 2.10A {Alvinella pompejana}
Probab=27.56 E-value=24 Score=23.51 Aligned_cols=15 Identities=27% Similarity=0.552 Sum_probs=12.6
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|+|+++|+|..
T Consensus 78 IGYhflI~~dG~Iye 92 (176)
T 3ep1_A 78 IKYNFLIDQDGVIYE 92 (176)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCccEEEcCCCEEEE
Confidence 377899999999865
No 337
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=27.46 E-value=43 Score=23.37 Aligned_cols=16 Identities=44% Similarity=0.860 Sum_probs=12.9
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 110 s~~~i~~~G~i~~~y~ 125 (303)
T 1uf5_A 110 TSILVDKSGKIVGKYR 125 (303)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEeeeEe
Confidence 5799999999877653
No 338
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=27.19 E-value=24 Score=23.03 Aligned_cols=15 Identities=27% Similarity=0.346 Sum_probs=12.3
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|+|+++|+|..
T Consensus 63 IGYhflI~~dG~Iye 77 (167)
T 2f2l_A 63 IAYNFLIGGDGNVYV 77 (167)
T ss_dssp CSCSEEECTTSCEEE
T ss_pred cCCcEEEcCCCEEEE
Confidence 367899999999854
No 339
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=27.17 E-value=44 Score=23.05 Aligned_cols=15 Identities=7% Similarity=0.149 Sum_probs=12.6
Q ss_pred eeEEECCCCcEEEEE
Q 033221 91 AKFLVDKNGQVVDRY 105 (125)
Q Consensus 91 ttflId~~G~v~~~~ 105 (125)
+.++|+++|+++.++
T Consensus 96 s~~~i~~~G~i~~~y 110 (276)
T 2w1v_A 96 TCSVFGPDGSLLVKH 110 (276)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 679999999997765
No 340
>1oht_A CG14704 protein; peptidoglycan-recognition protein-LB isoform 2, hydrolase; HET: TLA; 2.0A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=27.07 E-value=29 Score=23.71 Aligned_cols=15 Identities=13% Similarity=0.100 Sum_probs=12.5
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 76 IgyHflI~~dG~I~e 90 (215)
T 1oht_A 76 IGYSFGIGGDGMIYT 90 (215)
T ss_dssp CSSSEEECTTSCEEE
T ss_pred CcceEEECCCCEEEE
Confidence 367899999999865
No 341
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=26.74 E-value=45 Score=23.26 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=13.4
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 115 s~~~i~~~G~i~~~y~ 130 (283)
T 3hkx_A 115 TAELADEHGEVLASYQ 130 (283)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCcEEEEEc
Confidence 6899999999987654
No 342
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=26.60 E-value=45 Score=21.11 Aligned_cols=15 Identities=7% Similarity=0.235 Sum_probs=12.8
Q ss_pred eeEEECCCCcEEEEE
Q 033221 91 AKFLVDKNGQVVDRY 105 (125)
Q Consensus 91 ttflId~~G~v~~~~ 105 (125)
..++||++|+|+.++
T Consensus 71 DiiFld~~g~Vv~i~ 85 (136)
T 3pjy_A 71 DMLFIASDGTIRTIH 85 (136)
T ss_dssp EEEEECTTSBEEEEE
T ss_pred EEEEECCCCEEEEEE
Confidence 378899999999984
No 343
>2gx5_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, GAF domain; HET: PG4 P6G PCG PGE; 1.74A {Bacillus subtilis} PDB: 2b18_A 2hgv_A*
Probab=26.54 E-value=98 Score=20.37 Aligned_cols=15 Identities=20% Similarity=0.467 Sum_probs=12.9
Q ss_pred eEEECCCCcEEEEEc
Q 033221 92 KFLVDKNGQVVDRYY 106 (125)
Q Consensus 92 tflId~~G~v~~~~~ 106 (125)
.||++++|+|.....
T Consensus 49 vyIvs~~GkiLG~~~ 63 (170)
T 2gx5_A 49 IFVVSRRGKLLGYSI 63 (170)
T ss_dssp EEEEETTSBEEEEEC
T ss_pred EEEEcCCCCEEEEec
Confidence 599999999988754
No 344
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=26.35 E-value=37 Score=17.38 Aligned_cols=13 Identities=15% Similarity=0.452 Sum_probs=10.8
Q ss_pred eEEECCCCcEEEE
Q 033221 92 KFLVDKNGQVVDR 104 (125)
Q Consensus 92 tflId~~G~v~~~ 104 (125)
.+++|++|+|+..
T Consensus 5 i~~~d~~g~i~~~ 17 (96)
T 3a0s_A 5 IITLSKDGRITEW 17 (96)
T ss_dssp EEEEETTSBEEEE
T ss_pred EEEEcCCCCEeeh
Confidence 3789999999875
No 345
>2k7i_A UPF0339 protein ATU0232; protein of unknown function, swapped dimer. PSI2, structural genomics, unknown function; NMR {Agrobacterium tumefaciens str} SCOP: d.348.1.1
Probab=26.29 E-value=73 Score=18.45 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=26.3
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHhh
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLL 122 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll 122 (125)
+.-.|..++|+|+..-.+..+....++-|+.+.
T Consensus 35 ~rFrLkA~NGevIasSe~Y~sk~~a~~GIeSVk 67 (83)
T 2k7i_A 35 YRFRFKASNGETMFSSEGYKAKASAIHAIESIK 67 (83)
T ss_dssp EEEEECCTTSCCCEEBCCSSSHHHHHHHHHHHH
T ss_pred EEEEEEECCCCEEEECCCcCCHHHHHHHHHHHH
Confidence 344788899999998888888888887777654
No 346
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=26.27 E-value=58 Score=20.34 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=20.8
Q ss_pred eEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 92 KFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 92 tflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
..++|.+|+++.. ++..++-+.+..++.
T Consensus 118 lpVVd~~g~l~Gi----iT~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 118 LPVVDAEGIFQGI----ITRKSILKAVNALLH 145 (156)
T ss_dssp EEEECTTSBEEEE----EEHHHHHHHHHHHSC
T ss_pred eEEEecCCEEEEE----EEHHHHHHHHHHHhc
Confidence 4578999998765 577787777776654
No 347
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=25.92 E-value=37 Score=19.58 Aligned_cols=13 Identities=8% Similarity=0.220 Sum_probs=11.2
Q ss_pred eEEECCCCcEEEE
Q 033221 92 KFLVDKNGQVVDR 104 (125)
Q Consensus 92 tflId~~G~v~~~ 104 (125)
.+++|++|+|++.
T Consensus 18 viv~D~~g~I~~~ 30 (121)
T 4hi4_A 18 VMIADNDLNIIYM 30 (121)
T ss_dssp EEEEETTCBEEEE
T ss_pred EEEEcCCCeEEEe
Confidence 4789999999885
No 348
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=25.80 E-value=45 Score=20.01 Aligned_cols=18 Identities=11% Similarity=0.493 Sum_probs=16.4
Q ss_pred CChhhHHHHHHHHHHhcc
Q 033221 1 MTNSNYIELSQLYDKYKD 18 (125)
Q Consensus 1 ~~~~e~p~l~~l~~~y~~ 18 (125)
+|..|++++..|-.+|..
T Consensus 29 L~~~ElqqFA~Llr~YR~ 46 (98)
T 4fqn_A 29 LSSQEIQQFAALLHEYRN 46 (98)
T ss_dssp SCHHHHHHHHHHHHHHHT
T ss_pred cChHHHHHHHHHHHHHHc
Confidence 578999999999999985
No 349
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.56 E-value=46 Score=18.46 Aligned_cols=13 Identities=8% Similarity=0.141 Sum_probs=11.0
Q ss_pred eEEECCCCcEEEE
Q 033221 92 KFLVDKNGQVVDR 104 (125)
Q Consensus 92 tflId~~G~v~~~ 104 (125)
.+++|++|+|+..
T Consensus 20 i~~~D~~g~I~~~ 32 (115)
T 3b33_A 20 TLILDDGLAIRYA 32 (115)
T ss_dssp EEEECTTCBEEEE
T ss_pred EEEECCCCcEEEE
Confidence 4789999999875
No 350
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=25.36 E-value=58 Score=20.16 Aligned_cols=17 Identities=18% Similarity=0.257 Sum_probs=14.0
Q ss_pred eeeEEECCCCcEEEEEc
Q 033221 90 FAKFLVDKNGQVVDRYY 106 (125)
Q Consensus 90 PttflId~~G~v~~~~~ 106 (125)
=.|.|+|++|+.++.+.
T Consensus 95 ~~t~L~n~~GeevA~~~ 111 (121)
T 1ifr_A 95 LRTALINSTGEEVAMRK 111 (121)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEe
Confidence 35899999999988753
No 351
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=25.28 E-value=50 Score=25.23 Aligned_cols=24 Identities=21% Similarity=0.324 Sum_probs=18.4
Q ss_pred ChhhHHHHHHHHHHhccC----CeEEEE
Q 033221 2 TNSNYIELSQLYDKYKDQ----GLEILA 25 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~----g~~vvg 25 (125)
.+.|||.|.++.++|... |.+|.|
T Consensus 21 a~~~mp~l~~~r~~~~~~~pl~g~ri~~ 48 (436)
T 3h9u_A 21 AENEMPGLMELRREYGPSKPLKGAKIAG 48 (436)
T ss_dssp HHHHCHHHHHHHHHHTTTCTTTTCEEEE
T ss_pred HHhhCHHHHHHHHHHhccCCCCCCEEEE
Confidence 367999999999999643 666654
No 352
>3by9_A Sensor protein; histidine kinase sensor domain, phosphoprotein, transferase, two-component regulatory system; 1.70A {Vibrio cholerae}
Probab=25.19 E-value=49 Score=21.92 Aligned_cols=16 Identities=13% Similarity=-0.145 Sum_probs=13.3
Q ss_pred eeeEEECCCCcEEEEE
Q 033221 90 FAKFLVDKNGQVVDRY 105 (125)
Q Consensus 90 PttflId~~G~v~~~~ 105 (125)
...||+|++|+|+..-
T Consensus 164 g~~~l~d~~G~ii~~~ 179 (260)
T 3by9_A 164 SYFVATDDHQVVFMSS 179 (260)
T ss_dssp CEEEEECTTCBEEEES
T ss_pred CcEEEECCCCeEEEcC
Confidence 4579999999999863
No 353
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=25.10 E-value=72 Score=18.66 Aligned_cols=28 Identities=14% Similarity=0.007 Sum_probs=19.9
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+.-.++|.+|+++.. ++..++.+.+.++
T Consensus 100 ~~lpVvd~~g~~~Gi----it~~dll~~l~~~ 127 (128)
T 3gby_A 100 SVVPLADEDGRYEGV----VSRKRILGFLAER 127 (128)
T ss_dssp SEEEEECTTCBEEEE----EEHHHHHHHHHTT
T ss_pred cEEEEECCCCCEEEE----EEHHHHHHHHHhh
Confidence 445689999987665 5677777766654
No 354
>1s2j_A Peptidoglycan recognition protein SA CG11709-PA; mixed beta-sheet, PI-helix (ONE turn), hydrolase; 2.20A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=25.09 E-value=34 Score=23.32 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.7
Q ss_pred ceeeEEECCCCcEEE
Q 033221 89 NFAKFLVDKNGQVVD 103 (125)
Q Consensus 89 ~PttflId~~G~v~~ 103 (125)
+...|||+++|+|..
T Consensus 100 IgyHflI~~dG~Iye 114 (209)
T 1s2j_A 100 ISYNFLIGNDGIVYE 114 (209)
T ss_dssp CSSSEEECTTSCEEE
T ss_pred cCCCeEECCCCeEee
Confidence 477899999999865
No 355
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=25.08 E-value=49 Score=22.45 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=23.3
Q ss_pred CcccceeeEEECCCCcEEEEEcCCCChhHHHHHHHHh
Q 033221 85 DIQWNFAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKL 121 (125)
Q Consensus 85 ~i~~~PttflId~~G~v~~~~~G~~~~~~l~~~I~~l 121 (125)
+|.++|+. +|+.+|+- ..+-|....+.++..|.+.
T Consensus 179 Gv~GvPtf-vv~~~g~~-~~f~G~drl~~l~~~L~~~ 213 (234)
T 3rpp_A 179 GAFGLPIT-VAHVDGQT-HMLFGSDRMELLAHLLGEK 213 (234)
T ss_dssp TCSSSCEE-EEEETTEE-EEEESSSCHHHHHHHHTCC
T ss_pred CCCCCCEE-EEeCCCCc-CceeCccCHHHHHHHhccc
Confidence 47788974 66767752 2355888777877777543
No 356
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=25.05 E-value=1.1e+02 Score=18.04 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=27.8
Q ss_pred HHH-HHHHHhhCC---cccceeEeeccCCCccchHHHHHHhCCCCCCCCCcccceeeEEECCCCcEEE
Q 033221 40 DQI-ADFVCTRFK---SEFPIFEKIDVNGEHASPLYKLLKSGKWGIFGDDIQWNFAKFLVDKNGQVVD 103 (125)
Q Consensus 40 ~~~-~~f~~~~~~---~~fpv~~~~D~~g~~~~~~~~~l~~~~~~~~g~~i~~~PttflId~~G~v~~ 103 (125)
..+ +.+++ +.+ +.|-.+. +|.+.. .......+... + ++..+|+.| | +|+.+.
T Consensus 39 ~~alk~~L~-~~~~~~i~~~~vd-id~~~~-~~~~~~~l~~~----~--g~~tvP~vf-i--~g~~ig 94 (118)
T 3c1r_A 39 HAALNTLFE-KLKVPRSKVLVLQ-LNDMKE-GADIQAALYEI----N--GQRTVPNIY-I--NGKHIG 94 (118)
T ss_dssp HHHHHHHHT-TSCCCGGGEEEEE-GGGSTT-HHHHHHHHHHH----H--SCCSSCEEE-E--TTEEEE
T ss_pred HHHHHHHHH-HcCCCCCCeEEEE-CccCCC-hHHHHHHHHHH----h--CCCCcCEEE-E--CCEEEE
Confidence 567 88994 678 8887763 443321 01122233321 3 356789764 4 566643
No 357
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=25.04 E-value=48 Score=25.30 Aligned_cols=24 Identities=17% Similarity=0.302 Sum_probs=18.4
Q ss_pred ChhhHHHHHHHHHHhccC----CeEEEE
Q 033221 2 TNSNYIELSQLYDKYKDQ----GLEILA 25 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~----g~~vvg 25 (125)
.+.|||.|..+.++|... |.+|.|
T Consensus 32 a~~~mp~l~~~r~~~~~~~pl~G~ri~~ 59 (435)
T 3gvp_A 32 AEQEMPALMALRKRAQGEKPLAGAKIVG 59 (435)
T ss_dssp HHHTCHHHHHHHHHHSTTCTTTTCEEEE
T ss_pred HHHhCHHHHHHHHHHhccCCCCCCEEEE
Confidence 367999999999999643 676664
No 358
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=24.89 E-value=50 Score=25.54 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=19.5
Q ss_pred ChhhHHHHHHHHHHhcc----CCeEEEE
Q 033221 2 TNSNYIELSQLYDKYKD----QGLEILA 25 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~----~g~~vvg 25 (125)
.+.|||.|.++.++|.. +|.+|.|
T Consensus 38 a~~~mp~l~~~~~~~~~~~pl~g~~i~~ 65 (494)
T 3ce6_A 38 AEHEMPGLMSLRREYAEVQPLKGARISG 65 (494)
T ss_dssp HHHHCHHHHHHHHHHTTTCTTTTCEEEE
T ss_pred HHHHCHHHHHHHHHhhccCCCCCCEEEE
Confidence 36899999999999964 3788876
No 359
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=24.46 E-value=51 Score=23.67 Aligned_cols=16 Identities=19% Similarity=0.648 Sum_probs=13.2
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 117 sa~vi~p~G~i~~~Yr 132 (334)
T 2dyu_A 117 TAIIIDPQGEIILKYR 132 (334)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 6799999999887653
No 360
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=24.28 E-value=79 Score=17.30 Aligned_cols=18 Identities=6% Similarity=0.095 Sum_probs=13.1
Q ss_pred HHHHHHHHHhhCCccccee
Q 033221 39 NDQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 39 ~~~~~~f~~~~~~~~fpv~ 57 (125)
-..++.+++ +.++.|..+
T Consensus 19 C~~~~~~L~-~~~i~~~~v 36 (89)
T 2klx_A 19 CKRARDLLD-KKGVKYTDI 36 (89)
T ss_dssp THHHHHHHH-HHTCCEEEE
T ss_pred HHHHHHHHH-HcCCCcEEE
Confidence 367888885 568888765
No 361
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=24.21 E-value=34 Score=22.18 Aligned_cols=14 Identities=21% Similarity=0.553 Sum_probs=12.3
Q ss_pred eeEEECCCCcEEEE
Q 033221 91 AKFLVDKNGQVVDR 104 (125)
Q Consensus 91 ttflId~~G~v~~~ 104 (125)
..||+|++|+|+..
T Consensus 161 ~~~l~d~~G~ii~~ 174 (240)
T 3c8c_A 161 YVFIVSEDGTTIAH 174 (240)
T ss_dssp EEEEEETTSBEEEC
T ss_pred EEEEEcCCCcEEEe
Confidence 57999999999875
No 362
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=24.04 E-value=56 Score=21.74 Aligned_cols=23 Identities=26% Similarity=0.395 Sum_probs=14.2
Q ss_pred ChhhHHHHHHHHHHhccC-CeEEE
Q 033221 2 TNSNYIELSQLYDKYKDQ-GLEIL 24 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~-g~~vv 24 (125)
|..|.-.|.+|...|..+ |+.+|
T Consensus 109 ~~~e~~~L~~LN~~Ye~kFGfpFV 132 (181)
T 2q37_A 109 SASALQELAEWNVLYKKKFGFIFI 132 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEE
Confidence 455666677777777665 55543
No 363
>3o2i_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Leptospirillum rubarum}
Probab=23.85 E-value=76 Score=19.10 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=23.4
Q ss_pred ECCCCcEEEEEcCCCChhHHHHHHHHhhcc
Q 033221 95 VDKNGQVVDRYYPTTSLLSLEHDIKKLLGL 124 (125)
Q Consensus 95 Id~~G~v~~~~~G~~~~~~l~~~I~~ll~~ 124 (125)
+|..|-+.--+.|+.+...++..|..+|+.
T Consensus 90 ~~AGGL~~I~~P~E~SK~~V~~~i~~~L~r 119 (125)
T 3o2i_A 90 VEAGGLQEIGFPGELSKTEVRRRINAFLGK 119 (125)
T ss_dssp EEECCEEEEEEETTCCHHHHHHHHHHHHC-
T ss_pred cccCCeEEecCchhhhHHHHHHHHHHHhCc
Confidence 455666666788999999999999998864
No 364
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=23.82 E-value=54 Score=23.68 Aligned_cols=16 Identities=38% Similarity=0.821 Sum_probs=13.2
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 118 sa~vi~p~G~i~~~Y~ 133 (341)
T 2uxy_A 118 TLVLIDNNGEIVQKYR 133 (341)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEEE
Confidence 6799999999887653
No 365
>3w1s_C Ubiquitin-like protein ATG12; ubiquitin fold, E3-like, ATG3 binding, isopeptide bond betwe Gly186 and ATG5 Lys149, ligase; 2.60A {Saccharomyces cerevisiae S288C}
Probab=23.75 E-value=91 Score=18.27 Aligned_cols=21 Identities=14% Similarity=0.403 Sum_probs=16.7
Q ss_pred HHHHHHHHhccCCeEEEEeeC
Q 033221 8 ELSQLYDKYKDQGLEILAFPC 28 (125)
Q Consensus 8 ~l~~l~~~y~~~g~~vvgv~~ 28 (125)
.+.+||+.|++.|+-++.=+.
T Consensus 66 ~~~~Ly~~fk~dg~Lyv~Ys~ 86 (91)
T 3w1s_C 66 NIGELWMQFKTNDELIVSYCA 86 (91)
T ss_dssp BHHHHHHHHCBTTEEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEEEeC
Confidence 367999999999987776653
No 366
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=23.57 E-value=48 Score=25.71 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=18.4
Q ss_pred ChhhHHHHHHHHHHhccC----CeEEEE
Q 033221 2 TNSNYIELSQLYDKYKDQ----GLEILA 25 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~----g~~vvg 25 (125)
.+.|||.|.++.++|... |.+|.|
T Consensus 35 a~~~mp~l~~~r~~~~~~~pl~g~ri~~ 62 (488)
T 3ond_A 35 AEVEMPGLMASRSEFGPSQPFKGAKITG 62 (488)
T ss_dssp HHHTCHHHHHHHHHHGGGCTTTTCEEEE
T ss_pred HHhhCHHHHHHHHHHhcCCCCCCCEEEE
Confidence 367999999999999642 676654
No 367
>1j3g_A AMPD protein, AMPD; mixed alpha-beta, hydrolase; NMR {Citrobacter freundii} SCOP: d.118.1.1 PDB: 2y28_A 2y2b_A* 2y2c_A 2y2d_A 2y2e_A
Probab=23.25 E-value=35 Score=22.59 Aligned_cols=14 Identities=29% Similarity=0.638 Sum_probs=11.8
Q ss_pred eeeEEECCCCcEEE
Q 033221 90 FAKFLVDKNGQVVD 103 (125)
Q Consensus 90 PttflId~~G~v~~ 103 (125)
=..|+|+++|+|..
T Consensus 73 s~H~~I~~dG~I~q 86 (187)
T 1j3g_A 73 SAHCLIRRDGEIVQ 86 (187)
T ss_dssp BCSEEEETTTEEEE
T ss_pred ceEEEECCCCEEEE
Confidence 45799999999975
No 368
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=23.03 E-value=54 Score=25.31 Aligned_cols=24 Identities=13% Similarity=0.297 Sum_probs=19.7
Q ss_pred ChhhHHHHHHHHHHhccC----CeEEEE
Q 033221 2 TNSNYIELSQLYDKYKDQ----GLEILA 25 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~----g~~vvg 25 (125)
.+.|||.|.++.++|... |.+|.|
T Consensus 24 a~~~mp~l~~~~~~~~~~~pl~g~ri~~ 51 (479)
T 1v8b_A 24 SENEMPGLMRIREEYGKDQPLKNAKITG 51 (479)
T ss_dssp HGGGCHHHHHHHHHSTTTCTTTTCEEEE
T ss_pred HHhHCHHHHHHHHHhhccCCCCCCEEEE
Confidence 368999999999999643 788877
No 369
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=22.86 E-value=53 Score=25.35 Aligned_cols=24 Identities=13% Similarity=0.231 Sum_probs=18.6
Q ss_pred ChhhHHHHHHHHHHhccC----CeEEEE
Q 033221 2 TNSNYIELSQLYDKYKDQ----GLEILA 25 (125)
Q Consensus 2 ~~~e~p~l~~l~~~y~~~----g~~vvg 25 (125)
.+.|||.|.++.++|... |.+|.|
T Consensus 23 ae~~MP~L~~~r~~~~~~kPl~G~rI~~ 50 (464)
T 3n58_A 23 AETEMPGLMAAREEFGKSQPLKGARISG 50 (464)
T ss_dssp HHTTCHHHHHHHHHHTTTCTTTTCEEEE
T ss_pred HHhhCHHHHHHHHHHhccCCCCCCEEEE
Confidence 357999999999999643 777765
No 370
>2po1_B Probable exosome complex exonuclease 2; RNAse PH, hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus abyssi} PDB: 2po0_B* 2pnz_B 2po2_B*
Probab=22.57 E-value=1.4e+02 Score=20.83 Aligned_cols=31 Identities=10% Similarity=0.088 Sum_probs=22.7
Q ss_pred eeEEECCCCcEEEEEc---CCCChhHHHHHHHHh
Q 033221 91 AKFLVDKNGQVVDRYY---PTTSLLSLEHDIKKL 121 (125)
Q Consensus 91 ttflId~~G~v~~~~~---G~~~~~~l~~~I~~l 121 (125)
.++.++++|+|+.... |..+.+.|.+.++..
T Consensus 224 ~~v~~~~~g~i~~lq~~g~~~~~~~~l~~~l~~A 257 (277)
T 2po1_B 224 ITITTDETGHISAVQKSEGGAFKLEEVMYAVETA 257 (277)
T ss_dssp EEEEECTTSCEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEccCCCCCCHHHHHHHHHHH
Confidence 4677889998887654 567888777766654
No 371
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=22.48 E-value=57 Score=18.55 Aligned_cols=16 Identities=6% Similarity=-0.008 Sum_probs=12.5
Q ss_pred cee-eEEECCCCcEEEE
Q 033221 89 NFA-KFLVDKNGQVVDR 104 (125)
Q Consensus 89 ~Pt-tflId~~G~v~~~ 104 (125)
.|. .+++|++|+|+..
T Consensus 21 ~~~~i~~~D~~g~i~~~ 37 (118)
T 3fg8_A 21 GGLGFMALDEDLRIIYV 37 (118)
T ss_dssp TTCEEEEECTTCBEEEE
T ss_pred CCceEEEECCCCeEEEE
Confidence 343 5788999999886
No 372
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=22.47 E-value=98 Score=17.92 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=14.0
Q ss_pred HHHHHHHHHhhCCccccee
Q 033221 39 NDQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 39 ~~~~~~f~~~~~~~~fpv~ 57 (125)
=..++++++ .+++.|-.+
T Consensus 33 C~~ak~~L~-~~~i~~~~v 50 (109)
T 1wik_A 33 SKQILEILN-STGVEYETF 50 (109)
T ss_dssp HHHHHHHHH-HTCSCEEEE
T ss_pred HHHHHHHHH-HcCCCeEEE
Confidence 467889995 679998776
No 373
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=22.02 E-value=1.6e+02 Score=18.81 Aligned_cols=39 Identities=8% Similarity=-0.020 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCCcc
Q 033221 6 YIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFKSE 53 (125)
Q Consensus 6 ~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~~~ 53 (125)
+|...++-+..+.+|+.+.-++.. ....++.++ +++|+.
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~--------~~~~~~~~~-~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTAT--------NSFVTAPIA-RAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESS--------CHHHHHHHH-HHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCC--------CHHHHHHHH-HHcCCC
Confidence 577777777888888877666532 355566777 467765
No 374
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=21.67 E-value=70 Score=20.65 Aligned_cols=15 Identities=20% Similarity=0.293 Sum_probs=12.9
Q ss_pred eeEEECCCCcEEEEE
Q 033221 91 AKFLVDKNGQVVDRY 105 (125)
Q Consensus 91 ttflId~~G~v~~~~ 105 (125)
.|.|+|++|+.++.+
T Consensus 127 ~T~L~n~~GEevA~~ 141 (151)
T 1ufg_A 127 RTALINSTGEEVAMR 141 (151)
T ss_dssp EEEEECSSSCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 689999999988864
No 375
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=21.58 E-value=53 Score=21.85 Aligned_cols=16 Identities=13% Similarity=0.316 Sum_probs=13.9
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
..||+|++|+++.+..
T Consensus 168 ~~~l~d~~G~ii~~~p 183 (254)
T 3lif_A 168 SISLLHSDGRLLIQWP 183 (254)
T ss_dssp EEEEEETTSBEEEEET
T ss_pred EEEEEeCCCcEEEECC
Confidence 5799999999999853
No 376
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=21.57 E-value=59 Score=22.20 Aligned_cols=15 Identities=13% Similarity=0.222 Sum_probs=12.3
Q ss_pred eeeEEECCCCcEEEEE
Q 033221 90 FAKFLVDKNGQVVDRY 105 (125)
Q Consensus 90 PttflId~~G~v~~~~ 105 (125)
=+.++||++|+++ ++
T Consensus 93 Ns~~~i~~~G~i~-~y 107 (266)
T 2e11_A 93 NRLLWATPDGALQ-YY 107 (266)
T ss_dssp EEEEEECTTSCEE-EE
T ss_pred EEEEEECCCCCEE-EE
Confidence 3679999999988 55
No 377
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=21.45 E-value=43 Score=19.19 Aligned_cols=33 Identities=6% Similarity=-0.037 Sum_probs=21.0
Q ss_pred eeeEEECCCCcEEEEEcCCCChhHHHHHHHHhhc
Q 033221 90 FAKFLVDKNGQVVDRYYPTTSLLSLEHDIKKLLG 123 (125)
Q Consensus 90 PttflId~~G~v~~~~~G~~~~~~l~~~I~~ll~ 123 (125)
|-++.|+++|++..- .-.++.++|...+..+..
T Consensus 21 ~i~i~I~~dg~i~~~-~~~v~~~~L~~~l~~~~~ 53 (99)
T 2pfu_A 21 PVYLSVKADNSMFIG-NDPVTDETMITALNALTE 53 (99)
T ss_dssp CCEEEEETTTEEEET-TEEECSSSHHHHHHHHSS
T ss_pred CEEEEEeCCCCEEEC-CEecCHHHHHHHHHHHHh
Confidence 567889999976431 112455677777776643
No 378
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=21.39 E-value=51 Score=24.29 Aligned_cols=15 Identities=13% Similarity=0.091 Sum_probs=11.1
Q ss_pred cceeeEEECCCCcEE
Q 033221 88 WNFAKFLVDKNGQVV 102 (125)
Q Consensus 88 ~~PttflId~~G~v~ 102 (125)
..-+|+++.++|..+
T Consensus 339 qfe~Tv~~~~~g~~~ 353 (360)
T 2nw5_A 339 QFEHTVYLSEHGKEV 353 (360)
T ss_dssp EEEEEEEEETTEEEE
T ss_pred EEEEEEEECCCCcEE
Confidence 346788888888765
No 379
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A
Probab=21.25 E-value=2.1e+02 Score=21.54 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=46.8
Q ss_pred CChhhHHHHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhhCC-----cccceeEeeccCCCccchHHHHHH
Q 033221 1 MTNSNYIELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTRFK-----SEFPIFEKIDVNGEHASPLYKLLK 75 (125)
Q Consensus 1 ~~~~e~p~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~~~-----~~fpv~~~~D~~g~~~~~~~~~l~ 75 (125)
|+.+.+|...+|.++|-.+ +.+.-+- +.++++.|+..+-+ +-+..+. -|.+|.... +
T Consensus 211 m~~~Dv~~v~~Ll~~yl~~-f~l~~~f----------~~eev~Hw~lp~~~~~~~~Vi~tYVv-e~~~g~ITD-f----- 272 (392)
T 1iyk_A 211 MTGKDVSTVLSLLYKYQER-FDIVQLF----------TEEEFKHWMLGHDENSDSNVVKSYVV-EDENGIITD-Y----- 272 (392)
T ss_dssp CCGGGHHHHHHHHHHHHTT-SSEEEEC----------CHHHHHHHHHCSCSSSCCSSEEEEEE-ECTTSCEEE-E-----
T ss_pred CchhhHHHHHHHHHHHHHh-CCceeeC----------CHHHHHHHcccCCCCCCCceEEEEEE-ECCCCcEee-E-----
Confidence 6788999999999999765 6654432 47788888754445 6554442 245565443 1
Q ss_pred hCCCCCCCCCcccceeeEEECCCCcE
Q 033221 76 SGKWGIFGDDIQWNFAKFLVDKNGQV 101 (125)
Q Consensus 76 ~~~~~~~g~~i~~~PttflId~~G~v 101 (125)
+ .--.+|+|++=++.-..
T Consensus 273 ------~--SFY~Lpstv~~~~~~~~ 290 (392)
T 1iyk_A 273 ------F--SYYLLPFTVLDNAQHDE 290 (392)
T ss_dssp ------E--EEEECCEEESSCSSCSE
T ss_pred ------E--EEEECcccccCCCccch
Confidence 1 12356888876654333
No 380
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=21.15 E-value=62 Score=17.65 Aligned_cols=13 Identities=23% Similarity=0.197 Sum_probs=10.9
Q ss_pred eEEECCCCcEEEE
Q 033221 92 KFLVDKNGQVVDR 104 (125)
Q Consensus 92 tflId~~G~v~~~ 104 (125)
.+++|++|+++..
T Consensus 26 i~~~d~~g~i~~~ 38 (118)
T 3olo_A 26 SFCLGDNWQFLYV 38 (118)
T ss_dssp EEEECTTSBEEEE
T ss_pred EEEECCCCcEEEE
Confidence 4788999999875
No 381
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=20.86 E-value=65 Score=23.94 Aligned_cols=16 Identities=6% Similarity=0.314 Sum_probs=13.2
Q ss_pred eeEEECCCCcEEEEEc
Q 033221 91 AKFLVDKNGQVVDRYY 106 (125)
Q Consensus 91 ttflId~~G~v~~~~~ 106 (125)
+.++|+++|+++.++.
T Consensus 181 sa~vi~p~G~i~~~Yr 196 (405)
T 2vhh_A 181 TAVVISNSGRYLGKHR 196 (405)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCeEEEEEe
Confidence 6799999999887653
No 382
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=20.85 E-value=1e+02 Score=17.19 Aligned_cols=17 Identities=0% Similarity=0.223 Sum_probs=13.7
Q ss_pred HHHHHHHHhhCCccccee
Q 033221 40 DQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~ 57 (125)
..++++++ .++++|-.+
T Consensus 22 ~~ak~~L~-~~~i~~~~~ 38 (93)
T 1t1v_A 22 SEVTRILD-GKRIQYQLV 38 (93)
T ss_dssp HHHHHHHH-HTTCCCEEE
T ss_pred HHHHHHHH-HCCCceEEE
Confidence 67889995 679998776
No 383
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.84 E-value=1.6e+02 Score=18.17 Aligned_cols=40 Identities=13% Similarity=0.371 Sum_probs=24.2
Q ss_pred HHHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHh--hCCcccce
Q 033221 8 ELSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCT--RFKSEFPI 56 (125)
Q Consensus 8 ~l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~--~~~~~fpv 56 (125)
.+.++|+.|....+.||. .+ ++.+-++.|+++ ..|+..-+
T Consensus 67 nireiwerypqldvvviv-tt--------ddkewikdfieeakergvevfv 108 (162)
T 2l82_A 67 NIREIWERYPQLDVVVIV-TT--------DDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHHCTTCCEEEEE-EC--------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCCcEEEEE-ec--------CcHHHHHHHHHHHHhcCcEEEE
Confidence 467889999876554433 32 247788888732 24665333
No 384
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=20.82 E-value=63 Score=18.32 Aligned_cols=13 Identities=31% Similarity=0.659 Sum_probs=10.8
Q ss_pred eEEECCCCcEEEE
Q 033221 92 KFLVDKNGQVVDR 104 (125)
Q Consensus 92 tflId~~G~v~~~ 104 (125)
.+++|++|+++..
T Consensus 24 i~~~d~~g~i~~v 36 (117)
T 2r78_A 24 IFIMDAEGHYLDV 36 (117)
T ss_dssp EEEECTTSBEEEE
T ss_pred EEEECCCCCEEEe
Confidence 4789999999875
No 385
>3lic_A Sensor protein; PDC fold, ATP-binding, kinase, nucleotide-binding, phosphopr transferase, transmembrane; 2.30A {Shewanella oneidensis}
Probab=20.70 E-value=45 Score=22.35 Aligned_cols=14 Identities=14% Similarity=0.382 Sum_probs=12.3
Q ss_pred eeEEECCCCcEEEE
Q 033221 91 AKFLVDKNGQVVDR 104 (125)
Q Consensus 91 ttflId~~G~v~~~ 104 (125)
..||+|++|+|+.+
T Consensus 182 ~~~l~d~~G~ii~~ 195 (274)
T 3lic_A 182 RLVVLDDQGRLIFH 195 (274)
T ss_dssp GEEEECTTSCEEEC
T ss_pred eEEEECCCCCEEEe
Confidence 58999999999874
No 386
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=20.62 E-value=75 Score=21.76 Aligned_cols=19 Identities=5% Similarity=0.163 Sum_probs=16.4
Q ss_pred ceeeEEECCCCcEEEEEcC
Q 033221 89 NFAKFLVDKNGQVVDRYYP 107 (125)
Q Consensus 89 ~PttflId~~G~v~~~~~G 107 (125)
-|..+++|++|.+...|.|
T Consensus 106 ~P~NL~f~~~~~p~i~~RG 124 (215)
T 4ann_A 106 APDELFFTRDGLPIAKTRG 124 (215)
T ss_dssp SGGGEEECTTSCEEESCCE
T ss_pred ecceEEEcCCCCEEEEEcc
Confidence 4999999999988877776
No 387
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=20.45 E-value=1.6e+02 Score=19.81 Aligned_cols=36 Identities=11% Similarity=-0.110 Sum_probs=27.1
Q ss_pred ccceeeEEECCCCcEEEEEcCCCChhH--HHHHHHHhhc
Q 033221 87 QWNFAKFLVDKNGQVVDRYYPTTSLLS--LEHDIKKLLG 123 (125)
Q Consensus 87 ~~~PttflId~~G~v~~~~~G~~~~~~--l~~~I~~ll~ 123 (125)
...|...++|.+|+ .+...+..+.+. |.+-++.++.
T Consensus 193 ~~~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 193 GEIPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp CSSCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHHC
Confidence 35799999988776 455557777777 9988888764
No 388
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=20.38 E-value=1.4e+02 Score=17.50 Aligned_cols=17 Identities=18% Similarity=0.509 Sum_probs=13.8
Q ss_pred HHHHHHHHhhCCccccee
Q 033221 40 DQIADFVCTRFKSEFPIF 57 (125)
Q Consensus 40 ~~~~~f~~~~~~~~fpv~ 57 (125)
..+++++. .+|++|-.+
T Consensus 35 ~~ak~~L~-~~gi~y~~~ 51 (111)
T 3zyw_A 35 KQMVEILH-KHNIQFSSF 51 (111)
T ss_dssp HHHHHHHH-HTTCCCEEE
T ss_pred HHHHHHHH-HcCCCeEEE
Confidence 67889995 679998776
No 389
>3ztp_A Nucleoside diphosphate kinase; transferase; HET: GOL; 1.37A {Aquifex aeolicus} PDB: 3zto_A* 3ztq_A 3ztr_A 3zts_A
Probab=20.28 E-value=1.5e+02 Score=18.76 Aligned_cols=34 Identities=18% Similarity=0.419 Sum_probs=24.5
Q ss_pred HHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHh
Q 033221 9 LSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCT 48 (125)
Q Consensus 9 l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~ 48 (125)
+.++.+.+.++||.|++.-.-. -+.+.+.+|...
T Consensus 20 ~g~Ii~~i~~~Gf~I~~~k~~~------ls~e~a~~~Y~~ 53 (142)
T 3ztp_A 20 LGKILDRFIQEGFQIKALKMFR------FTPEKAGEFYYV 53 (142)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC------CCHHHHHHHTGG
T ss_pred HHHHHHHHHHcCCEEEEEeecc------CCHHHHHHHHHH
Confidence 3566777888999999987643 357777777643
No 390
>4hr2_A Nucleoside diphosphate kinase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: ADP; 1.95A {Burkholderia thailandensis} PDB: 4dut_A* 4ek2_A*
Probab=20.23 E-value=1.5e+02 Score=18.92 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=24.0
Q ss_pred HHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHh
Q 033221 9 LSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCT 48 (125)
Q Consensus 9 l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~ 48 (125)
+.++-+++.++||.|++.-.-. -+.+.+..|-..
T Consensus 24 ~g~Ii~rie~~Gf~I~~~k~~~------lt~e~a~~fY~~ 57 (145)
T 4hr2_A 24 IGQIYSRFENAGLKIVAARMAH------LSRADAEKFYAV 57 (145)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC------CCHHHHHHHTGG
T ss_pred HHHHHHHHHHCCCEEEEEeeec------CCHHHHHHHHHH
Confidence 3466777888999999987642 356777776643
No 391
>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} SCOP: d.58.6.1
Probab=20.02 E-value=1.5e+02 Score=18.52 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=25.0
Q ss_pred HHHHHHHhccCCeEEEEeeCCCCCCCCCCCHHHHHHHHHhh
Q 033221 9 LSQLYDKYKDQGLEILAFPCNQFGEEEPGSNDQIADFVCTR 49 (125)
Q Consensus 9 l~~l~~~y~~~g~~vvgv~~~~~~~~e~~~~~~~~~f~~~~ 49 (125)
+.++.+++.++||.|++.-+-. -+.+.+.+|-..+
T Consensus 19 ~g~Ii~~ie~~Gf~I~~~k~~~------ls~~~a~~~Y~~h 53 (136)
T 1k44_A 19 IGEIISRIERKGLTIAALQLRT------VSAELASQHYAEH 53 (136)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC------CCHHHHHHHTGGG
T ss_pred HHHHHHHHHHCCCEEEEEEEec------CCHHHHHHHHHHH
Confidence 4567778888999999987643 3577777776433
No 392
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=20.00 E-value=83 Score=19.98 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=12.9
Q ss_pred eeEEECCCCcEEEEE
Q 033221 91 AKFLVDKNGQVVDRY 105 (125)
Q Consensus 91 ttflId~~G~v~~~~ 105 (125)
.|.|+|++|+.++..
T Consensus 111 ~T~L~n~~GEevAt~ 125 (139)
T 2lll_A 111 RTVLVNADGEEVAMR 125 (139)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCCEEEEE
Confidence 589999999998863
Done!