Your job contains 1 sequence.
>033222
MEFLPFPFQMEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMAS
RHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRP
NLFM
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033222
(124 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040914 - symbol:AT2G34480 species:3702 "Arabi... 571 2.3e-55 1
TAIR|locus:2089516 - symbol:AT3G14600 species:3702 "Arabi... 571 2.3e-55 1
TAIR|locus:1005716700 - symbol:AT1G29965 species:3702 "Ar... 569 3.7e-55 1
TAIR|locus:2198269 - symbol:RPL18AA "60S ribosomal protei... 569 3.7e-55 1
ZFIN|ZDB-GENE-040426-1071 - symbol:rpl18a "ribosomal prot... 323 4.4e-29 1
UNIPROTKB|Q3T003 - symbol:RPL18A "60S ribosomal protein L... 318 1.5e-28 1
UNIPROTKB|E2RL34 - symbol:RPL18A "60S ribosomal protein L... 318 1.5e-28 1
UNIPROTKB|Q02543 - symbol:RPL18A "60S ribosomal protein L... 318 1.5e-28 1
UNIPROTKB|F1S935 - symbol:RPL18A "Uncharacterized protein... 318 1.5e-28 1
MGI|MGI:1924058 - symbol:Rpl18a "ribosomal protein L18A" ... 316 2.4e-28 1
RGD|1302976 - symbol:Rpl18a "ribosomal protein L18A" spec... 316 2.4e-28 1
UNIPROTKB|P62718 - symbol:Rpl18a "60S ribosomal protein L... 316 2.4e-28 1
UNIPROTKB|F1NPD3 - symbol:RPL18A "60S ribosomal protein L... 314 3.9e-28 1
UNIPROTKB|J9NVM6 - symbol:RPL18A "60S ribosomal protein L... 313 5.0e-28 1
DICTYBASE|DDB_G0285881 - symbol:rpl18a "S60 ribosomal pro... 311 8.2e-28 1
FB|FBgn0010409 - symbol:RpL18A "Ribosomal protein L18A" s... 304 4.5e-27 1
RGD|1565566 - symbol:RGD1565566 "similar to 60S ribosomal... 294 5.2e-26 1
WB|WBGene00004432 - symbol:rpl-20 species:6239 "Caenorhab... 294 5.2e-26 1
UNIPROTKB|F1MHJ6 - symbol:F1MHJ6 "60S ribosomal protein L... 255 7.0e-22 1
GENEDB_PFALCIPARUM|PF13_0224 - symbol:PF13_0224 "60S ribo... 253 1.1e-21 1
UNIPROTKB|Q8IDS6 - symbol:PF13_0224 "60S ribosomal protei... 253 1.1e-21 1
CGD|CAL0003667 - symbol:RPL20B species:5476 "Candida albi... 250 2.4e-21 1
UNIPROTKB|Q5AML4 - symbol:RPL20B "60S ribosomal protein L... 250 2.4e-21 1
UNIPROTKB|B4DM74 - symbol:RPL18A "60S ribosomal protein L... 243 1.3e-20 1
POMBASE|SPAC26A3.04 - symbol:rpl2002 "60S ribosomal prote... 243 1.3e-20 1
POMBASE|SPAC3A12.10 - symbol:rpl2001 "60S ribosomal prote... 243 1.3e-20 1
SGD|S000004855 - symbol:RPL20A "Ribosomal 60S subunit pro... 241 2.1e-20 1
SGD|S000005839 - symbol:RPL20B "Ribosomal 60S subunit pro... 241 2.1e-20 1
UNIPROTKB|G4N6U9 - symbol:MGG_03653 "60S ribosomal protei... 238 4.4e-20 1
ASPGD|ASPL0000056380 - symbol:AN0433 species:162425 "Emer... 237 5.7e-20 1
UNIPROTKB|F1M6F8 - symbol:F1M6F8 "60S ribosomal protein L... 206 1.1e-16 1
>TAIR|locus:2040914 [details] [associations]
symbol:AT2G34480 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EnsemblPlants:AT2G34480.1 GO:GO:0005886
GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0003735 EMBL:AC004077 EMBL:AC004481 GO:GO:0022625
EMBL:AY042803 EMBL:AY120778 EMBL:BT000076 EMBL:BT006559 EMBL:Z18039
IPI:IPI00548475 PIR:T02335 RefSeq:NP_180995.1 UniGene:At.23545
ProteinModelPortal:P51418 SMR:P51418 IntAct:P51418 STRING:P51418
PaxDb:P51418 PRIDE:P51418 GeneID:818011 KEGG:ath:AT2G34480
TAIR:At2g34480 eggNOG:COG2157 HOGENOM:HOG000211377
InParanoid:P51418 KO:K02882 OMA:KSRYWYF PhylomeDB:P51418
ProtClustDB:CLSN2683643 Genevestigator:P51418 GermOnline:AT2G34480
PANTHER:PTHR10052 Uniprot:P51418
Length = 178
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 104/114 (91%), Positives = 112/114 (98%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQ
Sbjct: 65 EIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQ 124
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
II+TAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPP+RKLKTTYKA++PNLFM
Sbjct: 125 IIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
>TAIR|locus:2089516 [details] [associations]
symbol:AT3G14600 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EnsemblPlants:AT3G14600.1 GO:GO:0009506
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 EMBL:AB023038 GO:GO:0022625 eggNOG:COG2157
HOGENOM:HOG000211377 KO:K02882 ProtClustDB:CLSN2683643
PANTHER:PTHR10052 EMBL:AY072540 EMBL:AY097377 EMBL:AY088351
IPI:IPI00548788 RefSeq:NP_188078.1 UniGene:At.22267
ProteinModelPortal:Q9LUD4 SMR:Q9LUD4 STRING:Q9LUD4 PaxDb:Q9LUD4
PRIDE:Q9LUD4 GeneID:820688 KEGG:ath:AT3G14600 TAIR:At3g14600
InParanoid:Q9LUD4 OMA:LCKREIT PhylomeDB:Q9LUD4
Genevestigator:Q9LUD4 GermOnline:AT3G14600 Uniprot:Q9LUD4
Length = 178
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 105/114 (92%), Positives = 110/114 (96%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCIQ
Sbjct: 65 EIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQ 124
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
II+TAT+PAKLCKRE TKQFHNSKIKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 125 IIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
>TAIR|locus:1005716700 [details] [associations]
symbol:AT1G29965 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 EnsemblPlants:AT1G29965.1
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882
ProtClustDB:CLSN2683643 PANTHER:PTHR10052 UniGene:At.40639
EMBL:AY128411 EMBL:BT000059 IPI:IPI00541044 RefSeq:NP_849729.1
ProteinModelPortal:Q8L7K0 SMR:Q8L7K0 STRING:Q8L7K0 PRIDE:Q8L7K0
DNASU:839875 GeneID:839875 KEGG:ath:AT1G29965 TAIR:At1g29965
InParanoid:Q8L7K0 PhylomeDB:Q8L7K0 ArrayExpress:Q8L7K0
Genevestigator:Q8L7K0 Uniprot:Q8L7K0
Length = 178
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 104/114 (91%), Positives = 111/114 (97%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQ
Sbjct: 65 EIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQ 124
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
II+TAT+PA LCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 125 IIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178
>TAIR|locus:2198269 [details] [associations]
symbol:RPL18AA "60S ribosomal protein L18A-1"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006914 "autophagy"
evidence=RCA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
EMBL:CP002684 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC022455 eggNOG:COG2157 KO:K02882 PANTHER:PTHR10052
IPI:IPI00846921 RefSeq:NP_001077626.1 UniGene:At.40639
ProteinModelPortal:A8MRF3 SMR:A8MRF3 STRING:A8MRF3 PaxDb:A8MRF3
EnsemblPlants:AT1G29970.2 GeneID:839876 KEGG:ath:AT1G29970
HOGENOM:HOG000015168 OMA:LAKSKFW ProtClustDB:CLSN2699051
Genevestigator:A8MRF3 Uniprot:A8MRF3
Length = 312
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 104/114 (91%), Positives = 111/114 (97%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQ
Sbjct: 199 EIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQ 258
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 124
II+TAT+PA LCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 259 IIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312
>ZFIN|ZDB-GENE-040426-1071 [details] [associations]
symbol:rpl18a "ribosomal protein L18a"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 ZFIN:ZDB-GENE-040426-1071
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BX890562
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 OrthoDB:EOG40P47V EMBL:AL928834 EMBL:BC049045
IPI:IPI00500619 RefSeq:NP_957354.1 UniGene:Dr.51263
ProteinModelPortal:Q7ZWJ4 STRING:Q7ZWJ4 PRIDE:Q7ZWJ4
Ensembl:ENSDART00000030215 GeneID:394035 KEGG:dre:394035
InParanoid:Q7ZWJ4 NextBio:20814997 ArrayExpress:Q7ZWJ4 Bgee:Q7ZWJ4
Uniprot:Q7ZWJ4
Length = 176
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/112 (53%), Positives = 79/112 (70%)
Query: 12 IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 71
+FEK+P K+KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+ IQI
Sbjct: 67 VFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQI 126
Query: 72 IRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 127 MKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|Q3T003 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 EMBL:BC102624 IPI:IPI00707386
RefSeq:NP_001028791.1 UniGene:Bt.49052 ProteinModelPortal:Q3T003
SMR:Q3T003 STRING:Q3T003 PRIDE:Q3T003 Ensembl:ENSBTAT00000021033
GeneID:404142 KEGG:bta:404142 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 InParanoid:Q3T003 OrthoDB:EOG40P47V
NextBio:20817578 Uniprot:Q3T003
Length = 176
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|E2RL34 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052
CTD:6142 GeneTree:ENSGT00390000015797 EMBL:AAEX03012289
RefSeq:XP_533877.1 Ensembl:ENSCAFT00000024008 GeneID:476672
KEGG:cfa:476672 NextBio:20852289 Uniprot:E2RL34
Length = 176
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|Q02543 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG2157
HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052
CTD:6142 HOVERGEN:HBG066281 EMBL:L05093 EMBL:X80822 EMBL:AC005796
EMBL:BC007512 EMBL:BC066319 EMBL:BC071920 IPI:IPI00026202
PIR:S47353 RefSeq:NP_000971.1 UniGene:Hs.337766
ProteinModelPortal:Q02543 SMR:Q02543 IntAct:Q02543
MINT:MINT-5000271 STRING:Q02543 PhosphoSite:Q02543 DMDM:730538
SWISS-2DPAGE:Q02543 PaxDb:Q02543 PeptideAtlas:Q02543 PRIDE:Q02543
DNASU:6142 Ensembl:ENST00000222247 GeneID:6142 KEGG:hsa:6142
UCSC:uc002nhp.2 GeneCards:GC19P017970 HGNC:HGNC:10311 MIM:604178
neXtProt:NX_Q02543 PharmGKB:PA34680 InParanoid:Q02543
GenomeRNAi:6142 NextBio:23861 ArrayExpress:Q02543 Bgee:Q02543
CleanEx:HS_RPL18A Genevestigator:Q02543 GermOnline:ENSG00000105640
Uniprot:Q02543
Length = 176
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|F1S935 [details] [associations]
symbol:RPL18A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
OMA:KSRYWYF PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:CU463003 Ensembl:ENSSSCT00000015175 Uniprot:F1S935
Length = 224
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 114 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 173
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 174 IMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 223
>MGI|MGI:1924058 [details] [associations]
symbol:Rpl18a "ribosomal protein L18A" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 MGI:MGI:1924058 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 OrthoDB:EOG40P47V EMBL:AK010983 EMBL:AK146543
EMBL:AK161942 EMBL:AK162047 EMBL:BC037146 IPI:IPI00162790
RefSeq:NP_084027.1 UniGene:Mm.379251 UniGene:Mm.431334
ProteinModelPortal:P62717 SMR:P62717 STRING:P62717
PhosphoSite:P62717 PaxDb:P62717 PRIDE:P62717
Ensembl:ENSMUST00000054220 GeneID:76808 KEGG:mmu:76808
UCSC:uc009mca.2 InParanoid:P62717 NextBio:345857 Bgee:P62717
CleanEx:MM_RPL18A Genevestigator:P62717
GermOnline:ENSMUSG00000045128 Uniprot:P62717
Length = 176
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>RGD|1302976 [details] [associations]
symbol:Rpl18a "ribosomal protein L18A" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1302976 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
PANTHER:PTHR10052 CTD:6142 HOVERGEN:HBG066281 OrthoDB:EOG40P47V
EMBL:X14181 EMBL:BC058498 IPI:IPI00192257 PIR:JC4231
RefSeq:NP_997675.1 UniGene:Rn.105821 ProteinModelPortal:P62718
SMR:P62718 IntAct:P62718 STRING:P62718 PhosphoSite:P62718
PRIDE:P62718 GeneID:290641 KEGG:rno:290641 UCSC:RGD:1302976
InParanoid:P62718 NextBio:631381 ArrayExpress:P62718
Genevestigator:P62718 GermOnline:ENSRNOG00000018795 Uniprot:P62718
Length = 176
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|P62718 [details] [associations]
symbol:Rpl18a "60S ribosomal protein L18a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1302976 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
PANTHER:PTHR10052 CTD:6142 HOVERGEN:HBG066281 OrthoDB:EOG40P47V
EMBL:X14181 EMBL:BC058498 IPI:IPI00192257 PIR:JC4231
RefSeq:NP_997675.1 UniGene:Rn.105821 ProteinModelPortal:P62718
SMR:P62718 IntAct:P62718 STRING:P62718 PhosphoSite:P62718
PRIDE:P62718 GeneID:290641 KEGG:rno:290641 UCSC:RGD:1302976
InParanoid:P62718 NextBio:631381 ArrayExpress:P62718
Genevestigator:P62718 GermOnline:ENSRNOG00000018795 Uniprot:P62718
Length = 176
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/113 (52%), Positives = 79/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|F1NPD3 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
OMA:KSRYWYF PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:AADN02009919 IPI:IPI00594850 Ensembl:ENSGALT00000015981
Uniprot:F1NPD3
Length = 182
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 58/113 (51%), Positives = 78/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+++EK P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 72 QVYEKTPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 131
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 132 IMKVEQIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 181
>UNIPROTKB|J9NVM6 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10052
GeneTree:ENSGT00390000015797 EMBL:AAEX03012236
Ensembl:ENSCAFT00000020448 OMA:TNEVRSK Uniprot:J9NVM6
Length = 176
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 58/113 (51%), Positives = 78/113 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + + R+ K + RPN F
Sbjct: 126 IMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLH---RQHKPRFTTKRPNTF 175
>DICTYBASE|DDB_G0285881 [details] [associations]
symbol:rpl18a "S60 ribosomal protein L18a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
dictyBase:DDB_G0285881 GenomeReviews:CM000153_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000082 eggNOG:COG2157
KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052 RefSeq:XP_637982.2
ProteinModelPortal:Q54MK8 STRING:Q54MK8 PRIDE:Q54MK8
EnsemblProtists:DDB0233692 GeneID:8625334 KEGG:ddi:DDB_G0285881
ProtClustDB:CLSZ2447207 Uniprot:Q54MK8
Length = 171
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 63/113 (55%), Positives = 77/113 (68%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EIFE P K+KN+G+++RY SR+G HN+YKEYRD T GAV QMY EMASRH R I
Sbjct: 62 EIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIH 121
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
II I A L +R +TKQFH+SKIKFPL + K K+T+ A+RPN F
Sbjct: 122 IIDIKEIAASLTRRANTKQFHDSKIKFPLTHR-----IAKSKSTFVANRPNTF 169
>FB|FBgn0010409 [details] [associations]
symbol:RpL18A "Ribosomal protein L18A" species:7227
"Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051298 "centrosome duplication"
evidence=IMP] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EMBL:AE013599 GO:GO:0051298 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000022 eggNOG:COG2157 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
EMBL:X75339 EMBL:AY071222 PIR:S45364 RefSeq:NP_523774.1
UniGene:Dm.669 ProteinModelPortal:P41093 SMR:P41093 DIP:DIP-19043N
IntAct:P41093 MINT:MINT-321854 STRING:P41093 PaxDb:P41093
PRIDE:P41093 EnsemblMetazoa:FBtr0086947 GeneID:36985
KEGG:dme:Dmel_CG6510 FlyBase:FBgn0010409 InParanoid:P41093
OrthoDB:EOG44XGZX PhylomeDB:P41093 ChiTaRS:RPL18A GenomeRNAi:36985
NextBio:801363 Bgee:P41093 GermOnline:CG6510 Uniprot:P41093
Length = 177
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 57/101 (56%), Positives = 73/101 (72%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+++E +P KIKN+GIWLRY SR+G HNMY+EYRD T+ GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKL 111
II+ +IPA +R KQFH+SKIKFPLV + RKL
Sbjct: 126 IIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166
>RGD|1565566 [details] [associations]
symbol:RGD1565566 "similar to 60S ribosomal protein L18a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1565566 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
IPI:IPI00392231 Ensembl:ENSRNOT00000068694 Uniprot:F1M0K6
Length = 176
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 56/113 (49%), Positives = 76/113 (67%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYR T G V Q Y +M +RH R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRYLTTAGLVTQCYQDMGARHCARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVVEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTIKRPNTF 175
>WB|WBGene00004432 [details] [associations]
symbol:rpl-20 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0000003 GO:GO:0005840 GO:GO:0003735
EMBL:FO081039 eggNOG:COG2157 HOGENOM:HOG000211377 OMA:KSRYWYF
PANTHER:PTHR10052 GeneTree:ENSGT00390000015797 PIR:B88677
PIR:T32612 ProteinModelPortal:O44480 SMR:O44480 MINT:MINT-1093825
STRING:O44480 PaxDb:O44480 EnsemblMetazoa:E04A4.8.1
EnsemblMetazoa:E04A4.8.2 UCSC:E04A4.8.1 WormBase:E04A4.8
InParanoid:O44480 NextBio:955817 Uniprot:O44480
Length = 180
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 53/111 (47%), Positives = 77/111 (69%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEKNP +KNYG+WL+Y SRTG+HNMY+EYRDTT+ GAV Q Y +M +RHR ++ I
Sbjct: 69 QVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIH 128
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPN 121
I++ T+ A+ KR K FH++KI+FPL + + RK + + +R N
Sbjct: 129 ILKVQTVKAEDTKRAGIKMFHDAKIRFPLPHRVTK---RKNLSVFTTARQN 176
>UNIPROTKB|F1MHJ6 [details] [associations]
symbol:F1MHJ6 "60S ribosomal protein L18a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:DAAA02029600 IPI:IPI00714344 PRIDE:F1MHJ6
Ensembl:ENSBTAT00000012903 OMA:IASKFHD NextBio:20866654
Uniprot:F1MHJ6
Length = 168
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 53/113 (46%), Positives = 72/113 (63%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWL Y SR+G HNM +EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLHYDSRSGTHNMDREYRDLTTAGAVTQCYRDMGARHRARAHLIQ 125
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ I A +FH+SKIKFPL + +R R+ K + RPN F
Sbjct: 126 IMKVEEIIAS--------KFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 167
>GENEDB_PFALCIPARUM|PF13_0224 [details] [associations]
symbol:PF13_0224 "60S ribosomal subunit protein
L18, putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 EMBL:AL844509
GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 ProtClustDB:CLSZ2447207 RefSeq:XP_001350134.1
ProteinModelPortal:Q8IDS6 PRIDE:Q8IDS6
EnsemblProtists:PF13_0224:mRNA GeneID:814191 KEGG:pfa:PF13_0224
EuPathDB:PlasmoDB:PF3D7_1341200 Uniprot:Q8IDS6
Length = 184
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/115 (43%), Positives = 74/115 (64%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+I E+ P ++KNYG+ LRY SRTG HNMYKE+RDTT GA+ Q+Y+EMA RHR R+ I
Sbjct: 72 QIKERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEMAGRHRARASSIN 131
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPT--RKLKTTYKASRPNLF 123
IIR + I + L +R KQ +++FP + PT ++ + + + RP+ +
Sbjct: 132 IIRISEISSSLVRRPHIKQLLKRRLRFPALHL----PTLQKEYRKKFASKRPSTY 182
>UNIPROTKB|Q8IDS6 [details] [associations]
symbol:PF13_0224 "60S ribosomal protein L18a" species:36329
"Plasmodium falciparum 3D7" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735
EMBL:AL844509 GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 ProtClustDB:CLSZ2447207
RefSeq:XP_001350134.1 ProteinModelPortal:Q8IDS6 PRIDE:Q8IDS6
EnsemblProtists:PF13_0224:mRNA GeneID:814191 KEGG:pfa:PF13_0224
EuPathDB:PlasmoDB:PF3D7_1341200 Uniprot:Q8IDS6
Length = 184
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/115 (43%), Positives = 74/115 (64%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+I E+ P ++KNYG+ LRY SRTG HNMYKE+RDTT GA+ Q+Y+EMA RHR R+ I
Sbjct: 72 QIKERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEMAGRHRARASSIN 131
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPT--RKLKTTYKASRPNLF 123
IIR + I + L +R KQ +++FP + PT ++ + + + RP+ +
Sbjct: 132 IIRISEISSSLVRRPHIKQLLKRRLRFPALHL----PTLQKEYRKKFASKRPSTY 182
>CGD|CAL0003667 [details] [associations]
symbol:RPL20B species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 CGD:CAL0003667
GO:GO:0009986 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000006 eggNOG:COG2157 KO:K02882 PANTHER:PTHR10052
RefSeq:XP_722704.1 ProteinModelPortal:Q5AML4 STRING:Q5AML4
GeneID:3635615 KEGG:cal:CaO19.4632 Uniprot:Q5AML4
Length = 172
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/113 (46%), Positives = 69/113 (61%)
Query: 12 IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 71
I E PTK+K +GIWLRY+SR+G HNMYKEYRD T GAVE MY ++A+RHR R I I
Sbjct: 64 ISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIHI 123
Query: 72 IRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
++ + KR+ KQF +KFPL + +K K ++A+ P F
Sbjct: 124 LKVVELEKTDDVKRQYVKQFLTKDLKFPLPHR-----VQKSKKLFQATAPTTF 171
>UNIPROTKB|Q5AML4 [details] [associations]
symbol:RPL20B "60S ribosomal protein L20" species:237561
"Candida albicans SC5314" [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 CGD:CAL0003667 GO:GO:0009986 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000006 eggNOG:COG2157
KO:K02882 PANTHER:PTHR10052 RefSeq:XP_722704.1
ProteinModelPortal:Q5AML4 STRING:Q5AML4 GeneID:3635615
KEGG:cal:CaO19.4632 Uniprot:Q5AML4
Length = 172
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/113 (46%), Positives = 69/113 (61%)
Query: 12 IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 71
I E PTK+K +GIWLRY+SR+G HNMYKEYRD T GAVE MY ++A+RHR R I I
Sbjct: 64 ISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIHI 123
Query: 72 IRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
++ + KR+ KQF +KFPL + +K K ++A+ P F
Sbjct: 124 LKVVELEKTDDVKRQYVKQFLTKDLKFPLPHR-----VQKSKKLFQATAPTTF 171
>UNIPROTKB|B4DM74 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC007201 PANTHER:PTHR10052 HOVERGEN:HBG066281
EMBL:AC005796 UniGene:Hs.337766 HGNC:HGNC:10311 EMBL:AK297323
IPI:IPI00847774 SMR:B4DM74 STRING:B4DM74 Ensembl:ENST00000420197
Uniprot:B4DM74
Length = 154
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 42/80 (52%), Positives = 58/80 (72%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQ
Sbjct: 66 QVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 125
Query: 71 IIRTATIPAKLCKRESTKQF 90
I++ I A C+R+ +F
Sbjct: 126 IMKVEEIAASKCRRQHKPRF 145
>POMBASE|SPAC26A3.04 [details] [associations]
symbol:rpl2002 "60S ribosomal protein L20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 PomBase:SPAC26A3.04 PomBase:SPAC3A12.10
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377
KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052 EMBL:AF127913 EMBL:AB009012
PIR:S10051 PIR:T38392 PIR:T43301 RefSeq:NP_593336.1
RefSeq:NP_594147.1 ProteinModelPortal:P05732 IntAct:P05732
MINT:MINT-4686805 STRING:P05732 PRIDE:P05732
EnsemblFungi:SPAC26A3.04.1 EnsemblFungi:SPAC3A12.10.1
GeneID:2542093 GeneID:2542725 KEGG:spo:SPAC26A3.04
KEGG:spo:SPAC3A12.10 OrthoDB:EOG46MFTW NextBio:20803166
Uniprot:P05732
Length = 176
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 51/114 (44%), Positives = 67/114 (58%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EI E P K K +GIW+RY SR+G HNMYKE+RDTT GAVE MY +MA+RHR R I+
Sbjct: 62 EISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIR 121
Query: 71 IIRTATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ + K +R KQ N +KFPL ++ K + RP+ F
Sbjct: 122 ILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175
>POMBASE|SPAC3A12.10 [details] [associations]
symbol:rpl2001 "60S ribosomal protein L20a (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
PomBase:SPAC26A3.04 PomBase:SPAC3A12.10 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 EMBL:AF127913 EMBL:AB009012 PIR:S10051 PIR:T38392
PIR:T43301 RefSeq:NP_593336.1 RefSeq:NP_594147.1
ProteinModelPortal:P05732 IntAct:P05732 MINT:MINT-4686805
STRING:P05732 PRIDE:P05732 EnsemblFungi:SPAC26A3.04.1
EnsemblFungi:SPAC3A12.10.1 GeneID:2542093 GeneID:2542725
KEGG:spo:SPAC26A3.04 KEGG:spo:SPAC3A12.10 OrthoDB:EOG46MFTW
NextBio:20803166 Uniprot:P05732
Length = 176
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 51/114 (44%), Positives = 67/114 (58%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
EI E P K K +GIW+RY SR+G HNMYKE+RDTT GAVE MY +MA+RHR R I+
Sbjct: 62 EISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIR 121
Query: 71 IIRTATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ + K +R KQ N +KFPL ++ K + RP+ F
Sbjct: 122 ILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175
>SGD|S000004855 [details] [associations]
symbol:RPL20A "Ribosomal 60S subunit protein L20A"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 SGD:S000004855 EMBL:BK006946 GO:GO:0003735
GO:GO:0002181 PDB:4B6A PDBsum:4B6A EMBL:Z48756 GO:GO:0022625
KO:K02882 PANTHER:PTHR10052 PDB:3U5E PDB:3U5I PDBsum:3U5E
PDBsum:3U5I EMBL:EF138821 PIR:S56056 RefSeq:NP_013969.3
RefSeq:NP_014957.2 ProteinModelPortal:P0CX23 SMR:P0CX23
EnsemblFungi:YMR242C EnsemblFungi:YOR312C GeneID:854489
GeneID:855283 KEGG:sce:YMR242C KEGG:sce:YOR312C CYGD:YMR242c
NextBio:976816 ArrayExpress:P0CX23 Uniprot:P0CX23
Length = 172
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 51/114 (44%), Positives = 71/114 (62%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+I E +PTK+KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I
Sbjct: 63 QINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIH 122
Query: 71 IIRTATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ A I KR+ KQF +KFPL + V+ T+ T+ RP+ F
Sbjct: 123 ILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-VQKSTK----TFSYKRPSTF 171
>SGD|S000005839 [details] [associations]
symbol:RPL20B "Ribosomal 60S subunit protein L20B"
species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 SGD:S000005839 EMBL:BK006948 GO:GO:0003735
GO:GO:0002181 EMBL:X90565 GO:GO:0022625 KO:K02882 PANTHER:PTHR10052
GeneTree:ENSGT00390000015797 PIR:S56056 RefSeq:NP_013969.3
RefSeq:NP_014957.2 EnsemblFungi:YMR242C EnsemblFungi:YOR312C
GeneID:854489 GeneID:855283 KEGG:sce:YMR242C KEGG:sce:YOR312C
NextBio:976816 EMBL:Z75220 EMBL:EF138822 ProteinModelPortal:P0CX24
SMR:P0CX24 CYGD:YOR312c ArrayExpress:P0CX24 GermOnline:YOR312C
Uniprot:P0CX24
Length = 172
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 51/114 (44%), Positives = 71/114 (62%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+I E +PTK+KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I
Sbjct: 63 QINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIH 122
Query: 71 IIRTATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I++ A I KR+ KQF +KFPL + V+ T+ T+ RP+ F
Sbjct: 123 ILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-VQKSTK----TFSYKRPSTF 171
>UNIPROTKB|G4N6U9 [details] [associations]
symbol:MGG_03653 "60S ribosomal protein L20" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM001234 KO:K02882 PANTHER:PTHR10052
RefSeq:XP_003716235.1 ProteinModelPortal:G4N6U9
EnsemblFungi:MGG_03653T0 GeneID:2676638 KEGG:mgr:MGG_03653
Uniprot:G4N6U9
Length = 174
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/114 (44%), Positives = 66/114 (57%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
+I EK+P K+KN+GIW+RY SR+G HNMYKEYR+ + AVE MY +MA+RHR R I
Sbjct: 63 KIHEKHPLKVKNFGIWIRYNSRSGTHNMYKEYRELSRTAAVEAMYQDMAARHRARFASIH 122
Query: 71 IIRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
I+R + KR KQ + FPL R P K + A RP+ F
Sbjct: 123 ILRVVELEKTDDIKRPYIKQLTTKGLTFPLPH---RVPKINNKKIFSARRPSTF 173
>ASPGD|ASPL0000056380 [details] [associations]
symbol:AN0433 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 OMA:KSRYWYF PANTHER:PTHR10052
EnsemblFungi:CADANIAT00002262 Uniprot:C8VTE9
Length = 148
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/113 (45%), Positives = 66/113 (58%)
Query: 12 IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 71
I EK P K+KN+GIWLRY SR+G HNMYKE+R+ + AVE +Y +MA+RHR R I I
Sbjct: 38 IHEKRPLKVKNFGIWLRYDSRSGTHNMYKEFREMSRTEAVEALYQDMAARHRARFGSIHI 97
Query: 72 IRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 123
++ I A +R KQ +KFPL R T K + SRP+ F
Sbjct: 98 LKVVEIEKADSIRRPYIKQLLQKNLKFPLPH---RSATGNKKKVFAYSRPSTF 147
>UNIPROTKB|F1M6F8 [details] [associations]
symbol:F1M6F8 "60S ribosomal protein L18a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10052 IPI:IPI00950365
Ensembl:ENSRNOT00000001255 Uniprot:F1M6F8
Length = 165
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 46/111 (41%), Positives = 64/111 (57%)
Query: 11 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 70
++FEK+P ++KN+GIWL Y SR+G HNM +EY D G V Q Y +M + H + IQ
Sbjct: 58 QVFEKSPLRVKNFGIWLCYDSRSGTHNMDREYWDLIATGVVTQCYRDMGAGHGA-THSIQ 116
Query: 71 IIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPN 121
++ I A R KQFH+S+IKFPL +R + K + A PN
Sbjct: 117 NVKVEEI-ADGKHRRPVKQFHDSRIKFPLPHHMLR----QQKPCFTAKSPN 162
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 124 124 0.00091 102 3 11 22 0.46 30
29 0.39 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 553 (59 KB)
Total size of DFA: 128 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.39u 0.09s 13.48t Elapsed: 00:00:02
Total cpu time: 13.39u 0.09s 13.48t Elapsed: 00:00:02
Start: Mon May 20 22:03:11 2013 End: Mon May 20 22:03:13 2013