BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033227
(124 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388498942|gb|AFK37537.1| unknown [Lotus japonicus]
gi|388512157|gb|AFK44140.1| unknown [Lotus japonicus]
Length = 125
Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/123 (92%), Positives = 120/123 (97%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MATI LRKGN RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MATISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTTKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DE+A+MQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKD 123
TKD
Sbjct: 121 TKD 123
>gi|217071004|gb|ACJ83862.1| unknown [Medicago truncatula]
gi|388522783|gb|AFK49453.1| unknown [Medicago truncatula]
Length = 124
Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/124 (91%), Positives = 120/124 (96%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
M TI LRKGN RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DE+A+MQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKDK 124
TKDK
Sbjct: 121 TKDK 124
>gi|356501392|ref|XP_003519509.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Glycine max]
Length = 124
Score = 240 bits (613), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/124 (91%), Positives = 120/124 (96%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA I LRKGN RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MAAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DE+A+MQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKDK 124
TKDK
Sbjct: 121 TKDK 124
>gi|356554173|ref|XP_003545423.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Glycine max]
Length = 124
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/124 (91%), Positives = 120/124 (96%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA I LRKGN RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MAAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
F+VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DE+A+MQEKYGVS
Sbjct: 61 FIVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKDK 124
TKDK
Sbjct: 121 TKDK 124
>gi|255580012|ref|XP_002530840.1| Pre-mRNA branch site protein p14, putative [Ricinus communis]
gi|223529604|gb|EEF31553.1| Pre-mRNA branch site protein p14, putative [Ricinus communis]
Length = 124
Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/124 (91%), Positives = 120/124 (96%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
M TI LRKGN RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MTTINLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQ+KK++E+AKMQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQRKKEEEIAKMQEKYGVS 120
Query: 121 TKDK 124
TKDK
Sbjct: 121 TKDK 124
>gi|357493883|ref|XP_003617230.1| Pre-mRNA branch site p14-like protein [Medicago truncatula]
gi|355518565|gb|AET00189.1| Pre-mRNA branch site p14-like protein [Medicago truncatula]
Length = 126
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/123 (91%), Positives = 119/123 (96%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
M TI LRKGN RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MTTISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DE+A+MQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQEKYGVS 120
Query: 121 TKD 123
TKD
Sbjct: 121 TKD 123
>gi|225435850|ref|XP_002262884.1| PREDICTED: pre-mRNA branch site p14-like protein [Vitis vinifera]
gi|147809527|emb|CAN62387.1| hypothetical protein VITISV_037629 [Vitis vinifera]
gi|147810953|emb|CAN67767.1| hypothetical protein VITISV_042768 [Vitis vinifera]
gi|296083881|emb|CBI24269.3| unnamed protein product [Vitis vinifera]
Length = 125
Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/125 (93%), Positives = 120/125 (96%), Gaps = 1/125 (0%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MATI LRKGN RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MATISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DELAKMQEKYGVS
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDELAKMQEKYGVS 120
Query: 121 -TKDK 124
KDK
Sbjct: 121 LNKDK 125
>gi|192910926|gb|ACF06571.1| RNA binding protein [Elaeis guineensis]
Length = 124
Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/124 (91%), Positives = 119/124 (95%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MATI LRKGN RLPPEVNRVLYVRNLPFNISSEEM DIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MATISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMCDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKK DQKKK+DELA+MQEKYG+S
Sbjct: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKVDQKKKEDELARMQEKYGLS 120
Query: 121 TKDK 124
+KDK
Sbjct: 121 SKDK 124
>gi|449444859|ref|XP_004140191.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Cucumis
sativus]
gi|449480996|ref|XP_004156051.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Cucumis
sativus]
Length = 125
Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/125 (91%), Positives = 120/125 (96%), Gaps = 1/125 (0%)
Query: 1 MATIPL-RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT 59
MAT L RKGN RLPPEVNRVL+VRNLPFNI+SEEMYDIFGKYGAIRQIRIG++KDTRGT
Sbjct: 1 MATFSLPRKGNTRLPPEVNRVLFVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGT 60
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK+DELA+MQEKYGV
Sbjct: 61 AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDELARMQEKYGV 120
Query: 120 STKDK 124
STKDK
Sbjct: 121 STKDK 125
>gi|224059684|ref|XP_002299969.1| predicted protein [Populus trichocarpa]
gi|222847227|gb|EEE84774.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/122 (91%), Positives = 118/122 (96%)
Query: 3 TIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFV 62
TI LRKGN RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG++KDTRGTAFV
Sbjct: 4 TISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFV 63
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQ KM+KKFDQKKK++E+AKMQEKYGVSTK
Sbjct: 64 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQPAKMNKKFDQKKKEEEIAKMQEKYGVSTK 123
Query: 123 DK 124
DK
Sbjct: 124 DK 125
>gi|224103985|ref|XP_002313271.1| predicted protein [Populus trichocarpa]
gi|222849679|gb|EEE87226.1| predicted protein [Populus trichocarpa]
Length = 124
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/121 (90%), Positives = 117/121 (96%)
Query: 3 TIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFV 62
TI LRKGN RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG++KDTRGTA+V
Sbjct: 4 TISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTAYV 63
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ KMSKKFDQKKK++E+ KMQEKYGV+TK
Sbjct: 64 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEEEIVKMQEKYGVTTK 123
Query: 123 D 123
D
Sbjct: 124 D 124
>gi|15239901|ref|NP_196780.1| pre-mRNA branch site protein p14 [Arabidopsis thaliana]
gi|297811341|ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|32129916|sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein
gi|9759386|dbj|BAB10037.1| unnamed protein product [Arabidopsis thaliana]
gi|21617984|gb|AAM67034.1| unknown [Arabidopsis thaliana]
gi|27754399|gb|AAO22648.1| putative RRM-containing protein [Arabidopsis thaliana]
gi|28394033|gb|AAO42424.1| putative RRM-containing protein [Arabidopsis thaliana]
gi|297319391|gb|EFH49813.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|332004389|gb|AED91772.1| pre-mRNA branch site protein p14 [Arabidopsis thaliana]
Length = 124
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/124 (86%), Positives = 112/124 (90%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
M TI LRK N RLPPEVNRVLYVRNLPFNI+SEEMYDIFGKYGAIRQIRIG K T+GTA
Sbjct: 1 MTTISLRKSNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKATKGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ KMSKKFDQKK +DE+ K+QEKYGVS
Sbjct: 61 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQHAKMSKKFDQKKSEDEITKLQEKYGVS 120
Query: 121 TKDK 124
TKDK
Sbjct: 121 TKDK 124
>gi|294461478|gb|ADE76300.1| unknown [Picea sitchensis]
Length = 123
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/122 (87%), Positives = 115/122 (94%)
Query: 3 TIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFV 62
+I LRK N RLPPEVNRV+YVRNLPFNI+SEEMYDIFGKYGAIRQIRIG +KDTRGTAFV
Sbjct: 2 SISLRKANTRLPPEVNRVVYVRNLPFNITSEEMYDIFGKYGAIRQIRIGVNKDTRGTAFV 61
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
VYEDIYDAK AVDHLSGFNVANRYLIVLYYQQ+KM+KK D KKK+D+LAKMQEKYGVSTK
Sbjct: 62 VYEDIYDAKNAVDHLSGFNVANRYLIVLYYQQSKMTKKVDHKKKEDDLAKMQEKYGVSTK 121
Query: 123 DK 124
DK
Sbjct: 122 DK 123
>gi|168022469|ref|XP_001763762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685006|gb|EDQ71404.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 122
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/119 (88%), Positives = 113/119 (94%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + +R+GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG++KDTRGTA
Sbjct: 1 MAALSIRRGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
FVVYEDIYDAK AVDHLSGFNVANRYLIVLYYQQ KMSKK DQ+KKD+EL K+QEKYGV
Sbjct: 61 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQQAKMSKKVDQRKKDEELTKLQEKYGV 119
>gi|440577389|emb|CCI55413.1| PH01B015M02.14 [Phyllostachys edulis]
Length = 130
Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 113/122 (92%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
M+ + LRK NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MSAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ TKMSKK D KKK+DE+ ++QEKYG+
Sbjct: 61 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDFKKKEDEITRLQEKYGLG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|195617826|gb|ACG30743.1| pre-mRNA branch site p14-like protein [Zea mays]
gi|414873579|tpg|DAA52136.1| TPA: pre-mRNA branch site p14-like protein [Zea mays]
Length = 130
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 112/122 (91%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MAAAGLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ KMSKK D KKK+DE+ ++QEKYG+
Sbjct: 61 YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEDEITRLQEKYGIG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|242037653|ref|XP_002466221.1| hypothetical protein SORBIDRAFT_01g003790 [Sorghum bicolor]
gi|241920075|gb|EER93219.1| hypothetical protein SORBIDRAFT_01g003790 [Sorghum bicolor]
Length = 130
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 112/122 (91%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MAAAGLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ KMSKK D KKK+DE+ ++QEKYG+
Sbjct: 61 YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEDEITRLQEKYGIG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|293332823|ref|NP_001168609.1| uncharacterized protein LOC100382393 [Zea mays]
gi|223949529|gb|ACN28848.1| unknown [Zea mays]
gi|413932679|gb|AFW67230.1| hypothetical protein ZEAMMB73_938561 [Zea mays]
Length = 130
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/122 (83%), Positives = 112/122 (91%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MAAAGLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ KMSKK D KKK+DE+ ++QEKYG+
Sbjct: 61 YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDIKKKEDEITRLQEKYGIG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|115456147|ref|NP_001051674.1| Os03g0811700 [Oryza sativa Japonica Group]
gi|32129324|gb|AAP73851.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711702|gb|ABF99497.1| Pre-mRNA branch site p14, putative, expressed [Oryza sativa
Japonica Group]
gi|113550145|dbj|BAF13588.1| Os03g0811700 [Oryza sativa Japonica Group]
gi|215765248|dbj|BAG86945.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768366|dbj|BAH00595.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193969|gb|EEC76396.1| hypothetical protein OsI_14028 [Oryza sativa Indica Group]
gi|222626029|gb|EEE60161.1| hypothetical protein OsJ_13072 [Oryza sativa Japonica Group]
Length = 130
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/122 (82%), Positives = 112/122 (91%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + LRK NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MAAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ KMSKK D KKK++E+ ++QEKYG+
Sbjct: 61 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDVKKKEEEITRLQEKYGLG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|302785385|ref|XP_002974464.1| hypothetical protein SELMODRAFT_442455 [Selaginella moellendorffii]
gi|302818419|ref|XP_002990883.1| hypothetical protein SELMODRAFT_229573 [Selaginella moellendorffii]
gi|300141444|gb|EFJ08156.1| hypothetical protein SELMODRAFT_229573 [Selaginella moellendorffii]
gi|300158062|gb|EFJ24686.1| hypothetical protein SELMODRAFT_442455 [Selaginella moellendorffii]
Length = 120
Score = 214 bits (545), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/120 (84%), Positives = 114/120 (95%), Gaps = 1/120 (0%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + +R+GN RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MAAL-VRRGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRVGNNKDTRGTA 59
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDIYDAK AVDHLSGFNVANRYLIVLYYQQ KMSKK DQ+KK++EL++MQEKYG++
Sbjct: 60 FVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQQAKMSKKNDQRKKEEELSRMQEKYGLN 119
>gi|357124365|ref|XP_003563871.1| PREDICTED: pre-mRNA branch site p14-like protein-like isoform 1
[Brachypodium distachyon]
gi|357124367|ref|XP_003563872.1| PREDICTED: pre-mRNA branch site p14-like protein-like isoform 2
[Brachypodium distachyon]
Length = 129
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 110/122 (90%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA LRKGNARLPPEVNR L+VRNLPFNISSEEMYDIFGKYGAIRQIR+G+ KDTRGTA
Sbjct: 1 MAAASLRKGNARLPPEVNRALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNGKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ TKM KK + K+K+DE+ ++QEKYG+
Sbjct: 61 YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMGKKTNIKQKEDEITRLQEKYGIG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|226532273|ref|NP_001148369.1| pre-mRNA branch site p14-like protein [Zea mays]
gi|195618630|gb|ACG31145.1| pre-mRNA branch site p14-like protein [Zea mays]
Length = 129
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/122 (82%), Positives = 111/122 (90%), Gaps = 1/122 (0%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR+G++KDTRGTA
Sbjct: 1 MAAAGLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDIYDAK AVDHLSGFNVANRYLIVLYYQ KMSKK D KK+DE+ ++QEKYG+
Sbjct: 61 YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSDV-KKEDEITRLQEKYGIG 119
Query: 121 TK 122
+K
Sbjct: 120 SK 121
>gi|384247265|gb|EIE20752.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 129
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/116 (80%), Positives = 103/116 (88%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ R NARLPPEVNRVLYVRNLPFNISSEEMYDIFGK+G +RQIR+G+SK+TRGTA+VV
Sbjct: 1 MAARARNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKFGGVRQIRLGTSKETRGTAYVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
YEDIYDAKTAVDHLSGFNVANRYLIVLYY +K SKK K K++EL KMQEKYGV
Sbjct: 61 YEDIYDAKTAVDHLSGFNVANRYLIVLYYNTSKQSKKTSTKDKEEELRKMQEKYGV 116
>gi|357114943|ref|XP_003559253.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA branch site p14-like
protein-like [Brachypodium distachyon]
Length = 146
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/122 (72%), Positives = 105/122 (86%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA LRKGNARLPPEVNR L+VRNLPFNISSEEMYDIFGKYGAIRQIR+G+ KDTR A
Sbjct: 1 MAAASLRKGNARLPPEVNRALFVRNLPFNISSEEMYDIFGKYGAIRQIRLGNGKDTRAXA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDIYDAK +DHL+GFNVANRYLIV+Y+Q K SKK + K+K DE+A+++E YG+
Sbjct: 61 YVVYEDIYDAKNVLDHLTGFNVANRYLIVIYHQPAKQSKKTNIKQKKDEIARLRETYGIG 120
Query: 121 TK 122
+K
Sbjct: 121 SK 122
>gi|297831966|ref|XP_002883865.1| hypothetical protein ARALYDRAFT_899711 [Arabidopsis lyrata subsp.
lyrata]
gi|297329705|gb|EFH60124.1| hypothetical protein ARALYDRAFT_899711 [Arabidopsis lyrata subsp.
lyrata]
Length = 125
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 103/115 (89%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
N RLPPEV R+LYVRNLPF+I+SE+MYD+FG+YGAIRQIRIG K+T+GT FVV+EDIY+
Sbjct: 11 NPRLPPEVTRLLYVRNLPFSITSEDMYDLFGRYGAIRQIRIGCDKNTKGTGFVVFEDIYE 70
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
AK AVDHLSGFN+ANRYLIV YYQ KMSKK D KK+++E+ K+QEKYGVSTKDK
Sbjct: 71 AKEAVDHLSGFNIANRYLIVQYYQHAKMSKKLDLKKEEEEITKLQEKYGVSTKDK 125
>gi|260790454|ref|XP_002590257.1| hypothetical protein BRAFLDRAFT_273506 [Branchiostoma floridae]
gi|229275448|gb|EEN46268.1| hypothetical protein BRAFLDRAFT_273506 [Branchiostoma floridae]
Length = 129
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 102/120 (85%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA RK N RLPPEVNR+LYVRNLP+ I++EEMYDIFGKYGAIRQIR+G++ +T+GTA
Sbjct: 1 MAMQAARKANVRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGAIRQIRMGNTPETKGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYYQ + KK DQKKK++EL+K++ KYGV
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQPNRAFKKVDQKKKEEELSKLKAKYGVG 120
>gi|91090518|ref|XP_969863.1| PREDICTED: similar to 14 kDa subunit splicing factor 3b [Tribolium
castaneum]
gi|270013874|gb|EFA10322.1| hypothetical protein TcasGA2_TC012538 [Tribolium castaneum]
Length = 121
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 102/121 (84%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA RK N RLPPE+NR+LY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALAMQRKANVRLPPEINRILYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ +K KK D +KK +E+ KM+ KYG++
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQASKAFKKTDIEKKQEEIDKMKSKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|225710692|gb|ACO11192.1| Pre-mRNA branch site p14-like protein [Caligus rogercresseyi]
Length = 124
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 98/117 (83%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K N RLPPEVNRVLY+RNLP+ IS+EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYEDI
Sbjct: 7 KNNVRLPPEVNRVLYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYEDI 66
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+DAK A DHLSGFNV NRYL+VLYYQ TK K+ D +KK +L M+ KYGVST K
Sbjct: 67 FDAKNACDHLSGFNVCNRYLVVLYYQATKAFKRIDMEKKQADLIAMKAKYGVSTPAK 123
>gi|350537007|ref|NP_001233084.1| uncharacterized protein LOC100159957 [Acyrthosiphon pisum]
gi|239788958|dbj|BAH71130.1| ACYPI001295 [Acyrthosiphon pisum]
Length = 124
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 99/117 (84%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK N RLPPE+NRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ DTRGTAFVVYED
Sbjct: 8 RKTNVRLPPEINRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTPDTRGTAFVVYED 67
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ TK KK D KK EL K++ KYG+S ++
Sbjct: 68 IFDAKNACDHLSGFNVCNRYLVVLYYQSTKAFKKLDTDKKKAELEKVKMKYGLSEEN 124
>gi|318087008|gb|ADV40096.1| 14 kDa subunit splicing factor 3b [Latrodectus hesperus]
Length = 121
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 100/117 (85%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK N RLPPEVNR+LYVRNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 5 RKTNVRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGAIRQIRLGNTPETRGTAFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ K KK D KK +E+ K+++KYGV+T D
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKKVDTDKKQEEIDKVKKKYGVTTDD 121
>gi|158290541|ref|XP_312143.4| AGAP002780-PA [Anopheles gambiae str. PEST]
gi|157017945|gb|EAA07781.4| AGAP002780-PA [Anopheles gambiae str. PEST]
Length = 126
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 102/123 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNRVLYVRNLP+ I+S+EMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALSMQKRNNVRLPPEVNRVLYVRNLPYKITSDEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ TK K+ D KK DEL +M+ KY +S
Sbjct: 61 FVVYEDIFDAKNARDHLSGFNVCNRYLVVLYYQSTKAFKQLDVDKKQDELDQMKAKYNIS 120
Query: 121 TKD 123
T++
Sbjct: 121 TEE 123
>gi|170045128|ref|XP_001850172.1| pre-mRNA branch site protein p14 [Culex quinquefasciatus]
gi|167868145|gb|EDS31528.1| pre-mRNA branch site protein p14 [Culex quinquefasciatus]
Length = 126
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 100/123 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNRVLYVRNLP+ I+S+EMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALAMQKRNNVRLPPEVNRVLYVRNLPYKITSDEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ TK K+ D KK DEL M+ KY ++
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQSTKAFKRLDVDKKQDELDAMKAKYNIN 120
Query: 121 TKD 123
+ D
Sbjct: 121 SDD 123
>gi|346472025|gb|AEO35857.1| hypothetical protein [Amblyomma maculatum]
Length = 120
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 100/114 (87%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK + RLPPEVNR+LYVRNLP+ IS EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 5 RKTSVRLPPEVNRILYVRNLPYKISGEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I+DAK A DHLSGFNV NRYL+VLYYQ TK K+ DQ+KK +E+ ++++KYGVS
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQPTKAFKRVDQEKKKEEIERVKKKYGVS 118
>gi|225714578|gb|ACO13135.1| Pre-mRNA branch site p14-like protein [Lepeophtheirus salmonis]
gi|290560992|gb|ADD37898.1| Pre-mRNA branch site p14-like protein [Lepeophtheirus salmonis]
Length = 126
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 83/114 (72%), Positives = 97/114 (85%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K N RLPPEVNRVLY+RNLP+ IS+EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYEDI
Sbjct: 8 KNNVRLPPEVNRVLYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYEDI 67
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
+DAK A DHLSGFNV NRYL+VLYYQ TK K+ D +KK +L M+ KYG+ST
Sbjct: 68 FDAKNACDHLSGFNVCNRYLVVLYYQATKAFKRIDMEKKQADLIAMKAKYGLST 121
>gi|332374910|gb|AEE62596.1| unknown [Dendroctonus ponderosae]
Length = 121
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA RK N RLPPE+NR+LYVRNLP+ I+ EEMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALAMQRKTNVRLPPEINRILYVRNLPYKITGEEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ K KK D KK +E+ KM+ KYG++
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQANKAFKKTDLDKKQEEIDKMKSKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|443712581|gb|ELU05835.1| hypothetical protein CAPTEDRAFT_219319 [Capitella teleta]
Length = 123
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 98/113 (86%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
N RLPPEVNR+LYV+NLP+ I++EEMYDIFGKYGAIRQIR+ +S+DT+GTAFVVYEDI+
Sbjct: 9 NNVRLPPEVNRILYVKNLPYRITAEEMYDIFGKYGAIRQIRVSNSQDTKGTAFVVYEDIF 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
DAK A DHLSGFNV NRYL+VLYYQ K+ KK DQ KK +EL +M+ KYG+ST
Sbjct: 69 DAKNACDHLSGFNVCNRYLVVLYYQPNKVYKKVDQDKKQEELDRMKAKYGLST 121
>gi|157111478|ref|XP_001651583.1| splicing factor SC35, putative [Aedes aegypti]
gi|108878352|gb|EAT42577.1| AAEL005909-PA [Aedes aegypti]
Length = 126
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 101/123 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNRVLYVRNLP+ I+S+EMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALAMQKRNNVRLPPEVNRVLYVRNLPYKITSDEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ TK K+ D KK +EL +M+ KY ++
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQSTKAFKRLDVDKKQEELDQMKAKYNIN 120
Query: 121 TKD 123
+ D
Sbjct: 121 SDD 123
>gi|196014632|ref|XP_002117175.1| hypothetical protein TRIADDRAFT_51007 [Trichoplax adhaerens]
gi|190580397|gb|EDV20481.1| hypothetical protein TRIADDRAFT_51007 [Trichoplax adhaerens]
Length = 121
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/117 (69%), Positives = 100/117 (85%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LYVRNLP+ I+ EE+YDIFGKYGAIRQIR+G++ DT+GTAFVVYED
Sbjct: 5 KRSNIRLPPEVNRILYVRNLPYKITGEELYDIFGKYGAIRQIRLGTNADTKGTAFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A +HLSGFNV NRYL+VLYYQ K K D++KK EL +M+EKYGVST++
Sbjct: 65 IFDAKNACEHLSGFNVCNRYLVVLYYQSNKAFTKMDKEKKRSELDRMKEKYGVSTEN 121
>gi|389610245|dbj|BAM18734.1| splicing factor SC35 [Papilio xuthus]
Length = 126
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 102/123 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA R+ N RLPPEVNR+LYVRNLP+ IS+EEMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALALQRRANVRLPPEVNRILYVRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYY+ K K D +KK +E+ +++KYG+S
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYRSNKAFKGMDIEKKQEEIDTLKKKYGIS 120
Query: 121 TKD 123
++D
Sbjct: 121 SED 123
>gi|301106042|ref|XP_002902104.1| pre-mRNA branch site protein p14, putative [Phytophthora infestans
T30-4]
gi|262098724|gb|EEY56776.1| pre-mRNA branch site protein p14, putative [Phytophthora infestans
T30-4]
Length = 162
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/122 (71%), Positives = 100/122 (81%), Gaps = 3/122 (2%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
+ ++ R+GNARLPPEVNRVLYVRNLPF ISSEE+YDIFGKYGAIRQIR+G + DTRGTA
Sbjct: 40 VMSVQGRRGNARLPPEVNRVLYVRNLPFKISSEELYDIFGKYGAIRQIRLGVNNDTRGTA 99
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK---FDQKKKDDELAKMQEKY 117
FVVYEDIYDAK AVDHLSGFNV RYLIVLYYQ KM ++ D K+ EL +++KY
Sbjct: 100 FVVYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQANKMQQRKGAVDINKQKKELQDLKDKY 159
Query: 118 GV 119
GV
Sbjct: 160 GV 161
>gi|357628249|gb|EHJ77639.1| 14 kDa subunit splicing factor 3b [Danaus plexippus]
Length = 126
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 101/123 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA R+ N RLPPEVNR+LY+RNLP+ IS+EEMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALALQRRANVRLPPEVNRILYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYY+ K K D +KK +EL +++KYG+S
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYRSNKAFKGMDIEKKQEELDTLKKKYGIS 120
Query: 121 TKD 123
+ D
Sbjct: 121 SDD 123
>gi|348679843|gb|EGZ19659.1| hypothetical protein PHYSODRAFT_312714 [Phytophthora sojae]
Length = 124
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 97/117 (82%), Gaps = 3/117 (2%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+GNARLPPEVNRVLYVRNLPF ISSEE+YDIFGKYGAIRQIR+G + DTRGTAFVVYED
Sbjct: 8 RRGNARLPPEVNRVLYVRNLPFKISSEELYDIFGKYGAIRQIRLGVNNDTRGTAFVVYED 67
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK---FDQKKKDDELAKMQEKYGVS 120
IYDAK AVDHLSGFNV RYLIVLYYQ KM ++ D K+ EL +++KYGV
Sbjct: 68 IYDAKNAVDHLSGFNVCGRYLIVLYYQANKMQQRKAAVDLDKQKQELQDLKDKYGVE 124
>gi|198431804|ref|XP_002123878.1| PREDICTED: similar to Pre-mRNA branch site protein p14 (SF3B 14 kDa
subunit) [Ciona intestinalis]
Length = 124
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 101/124 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA R+ N RLPPEV+R+LYVRNLP+ I++EEMYDIFGKYGAIRQIR+GS+ DT+GTA
Sbjct: 1 MAMQAARRANVRLPPEVHRILYVRNLPYKITAEEMYDIFGKYGAIRQIRLGSTTDTKGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + KK D +KK ++L KM+ K+GVS
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNPNRQFKKKDAEKKQEQLDKMKAKFGVS 120
Query: 121 TKDK 124
T K
Sbjct: 121 TDPK 124
>gi|321478268|gb|EFX89225.1| hypothetical protein DAPPUDRAFT_230136 [Daphnia pulex]
Length = 122
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/120 (69%), Positives = 99/120 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA +K N RLPPEVNR+LYVRNLP+ I+SEEMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MAMAMQKKLNVRLPPEVNRILYVRNLPYKITSEEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ TK KK D KK +E+ M+ K+G++
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQPTKAFKKVDTDKKKEEIESMKAKFGLN 120
>gi|221106406|ref|XP_002160322.1| PREDICTED: pre-mRNA branch site protein p14-like [Hydra
magnipapillata]
Length = 123
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 99/114 (86%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNR+LY+RNLP+ IS+EE+YDIFGKYGAIRQ+R+G +++TRGTA+VVYED
Sbjct: 5 RRTNVRLPPEVNRILYIRNLPYKISAEELYDIFGKYGAIRQVRLGVTQETRGTAYVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I+DAK A DHLSGFNV NRYLIVLYYQ KM +K D+ KK D++ K++ KYGV+
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLIVLYYQANKMFQKMDKDKKQDQIDKLKTKYGVT 118
>gi|112982994|ref|NP_001037588.1| 14 kDa subunit splicing factor 3b [Bombyx mori]
gi|95102910|gb|ABF51396.1| 14 kDa subunit splicing factor 3b [Bombyx mori]
gi|95115196|gb|ABF55964.1| CG13298-like protein [Bombyx mori]
Length = 126
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 101/123 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA R+ N RLPPEVNR+LY+RNLP+ IS+EEMYDIFGKYGAIRQIR+G++ +TRGTA
Sbjct: 1 MALALQRRANVRLPPEVNRILYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYY+ K K D KK +E+ +++KYG+S
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYRSNKAFKGIDIDKKQEEIDTLKKKYGIS 120
Query: 121 TKD 123
++D
Sbjct: 121 SED 123
>gi|302837261|ref|XP_002950190.1| hypothetical protein VOLCADRAFT_60121 [Volvox carteri f.
nagariensis]
gi|300264663|gb|EFJ48858.1| hypothetical protein VOLCADRAFT_60121 [Volvox carteri f.
nagariensis]
Length = 128
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 95/107 (88%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPPEVNR L+VRNLPFNISSEEMYDIFGKYG IRQIRIG++K+TRGTA+VVYEDIYDAK
Sbjct: 13 LPPEVNRALFVRNLPFNISSEEMYDIFGKYGPIRQIRIGTTKETRGTAYVVYEDIYDAKN 72
Query: 73 AVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
A DHLSGFNVANRYLIVLY+ + SKK K+++++L KMQ+KYGV
Sbjct: 73 ACDHLSGFNVANRYLIVLYFNPVRHSKKISTKEQEEQLRKMQDKYGV 119
>gi|387915104|gb|AFK11161.1| pre-mRNA branch site protein p14 [Callorhinchus milii]
Length = 124
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 103/124 (83%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK+A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKSACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKILKEKYGIN 120
Query: 121 TKDK 124
T+ K
Sbjct: 121 TETK 124
>gi|442752715|gb|JAA68517.1| Putative 14 kda subunit splicing factor 3b [Ixodes ricinus]
Length = 119
Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 98/113 (86%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK + RLPPEVNR+LYVRNLP+ IS EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 5 RKTSVRLPPEVNRILYVRNLPYKISGEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
I+DAK A DHLSGFNV NRYL+VLYYQ TK K+ DQ KK +E+ ++++KYG+
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQPTKAFKRVDQDKKKEEIDRVKKKYGM 117
>gi|303272269|ref|XP_003055496.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463470|gb|EEH60748.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 128
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/112 (74%), Positives = 97/112 (86%), Gaps = 2/112 (1%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
NARLPPEVNR +YVRNLPFNISSEEM+DIFGKYGA+RQ+RIG++K+TRGTA+VVYEDIYD
Sbjct: 10 NARLPPEVNRAVYVRNLPFNISSEEMFDIFGKYGALRQVRIGNTKETRGTAYVVYEDIYD 69
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKK--FDQKKKDDELAKMQEKYGV 119
AK AVDHLSGFNVANRYLI LYY +M+K+ D KK E+ +QE+YGV
Sbjct: 70 AKNAVDHLSGFNVANRYLICLYYNPQRMNKRQQNDLAKKQQEIKDLQERYGV 121
>gi|325184774|emb|CCA19265.1| premRNA branch site protein p14 putative [Albugo laibachii Nc14]
Length = 122
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 100/123 (81%), Gaps = 4/123 (3%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + R+GNARLPPEVNRVLYVRNLPF ISSEEMYDIFGKYGAIRQIR+G + +TRGTA
Sbjct: 1 MAAVG-RRGNARLPPEVNRVLYVRNLPFKISSEEMYDIFGKYGAIRQIRLGVNNETRGTA 59
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK---FDQKKKDDELAKMQEKY 117
FV+YEDIYDAK AVDHLSGFNV RYLIVLYYQ KM ++ +K+ EL +++KY
Sbjct: 60 FVIYEDIYDAKNAVDHLSGFNVCGRYLIVLYYQPHKMQQRKGGGQLEKQKQELEGLRQKY 119
Query: 118 GVS 120
GV
Sbjct: 120 GVE 122
>gi|405971690|gb|EKC36513.1| Pre-mRNA branch site p14-like protein [Crassostrea gigas]
Length = 136
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 98/113 (86%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLPPEVNR+LYVRNLP+ I++EEMYDIFGKYGAIRQIR+G++ +T+GTAFVVYEDI+DAK
Sbjct: 23 RLPPEVNRILYVRNLPYKITAEEMYDIFGKYGAIRQIRVGNTTETKGTAFVVYEDIFDAK 82
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
A DHLSGFNV NRYL+VLY+Q K KK D KK +++ KM++KYG+ST +K
Sbjct: 83 NACDHLSGFNVCNRYLVVLYFQPNKAFKKTDDNKKKEDIDKMKQKYGLSTPEK 135
>gi|328781179|ref|XP_394807.4| PREDICTED: pre-mRNA branch site p14-like protein-like [Apis
mellifera]
Length = 146
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 98/118 (83%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 29 RRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYED 88
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +E+ K++ KY ++ + K
Sbjct: 89 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDVDKKMEEIDKLKTKYNLNEEKK 146
>gi|7706326|ref|NP_057131.1| pre-mRNA branch site protein p14 [Homo sapiens]
gi|13384692|ref|NP_079599.1| pre-mRNA branch site protein p14 [Mus musculus]
gi|50344788|ref|NP_001002067.1| pre-mRNA branch site protein p14 [Danio rerio]
gi|114051091|ref|NP_001039482.1| pre-mRNA branch site protein p14 [Bos taurus]
gi|386781011|ref|NP_001247813.1| pre-mRNA branch site protein p14 [Macaca mulatta]
gi|403420592|ref|NP_001258151.1| uncharacterized protein LOC100365504 [Rattus norvegicus]
gi|50745107|ref|XP_419986.1| PREDICTED: pre-mRNA branch site protein p14 [Gallus gallus]
gi|55595200|ref|XP_515324.1| PREDICTED: pre-mRNA branch site protein p14-like isoform 2 [Pan
troglodytes]
gi|57098153|ref|XP_532889.1| PREDICTED: pre-mRNA branch site protein p14 [Canis lupus
familiaris]
gi|149408929|ref|XP_001510459.1| PREDICTED: pre-mRNA branch site protein p14-like isoform 1
[Ornithorhynchus anatinus]
gi|149727736|ref|XP_001503233.1| PREDICTED: pre-mRNA branch site protein p14-like [Equus caballus]
gi|224048823|ref|XP_002188838.1| PREDICTED: pre-mRNA branch site protein p14-like [Taeniopygia
guttata]
gi|291387166|ref|XP_002710108.1| PREDICTED: splicing factor 3B, 14 kDa subunit [Oryctolagus
cuniculus]
gi|296224379|ref|XP_002758038.1| PREDICTED: pre-mRNA branch site protein p14 [Callithrix jacchus]
gi|297668080|ref|XP_002812282.1| PREDICTED: pre-mRNA branch site protein p14-like [Pongo abelii]
gi|301756058|ref|XP_002913845.1| PREDICTED: pre-mRNA branch site protein p14-like [Ailuropoda
melanoleuca]
gi|311253034|ref|XP_003125412.1| PREDICTED: pre-mRNA branch site protein p14-like [Sus scrofa]
gi|326916588|ref|XP_003204588.1| PREDICTED: pre-mRNA branch site protein p14-like [Meleagris
gallopavo]
gi|327261123|ref|XP_003215381.1| PREDICTED: pre-mRNA branch site protein p14-like [Anolis
carolinensis]
gi|332242914|ref|XP_003270625.1| PREDICTED: pre-mRNA branch site protein p14-like [Nomascus
leucogenys]
gi|344280379|ref|XP_003411961.1| PREDICTED: pre-mRNA branch site protein p14-like [Loxodonta
africana]
gi|348574810|ref|XP_003473183.1| PREDICTED: pre-mRNA branch site protein p14-like [Cavia porcellus]
gi|354471023|ref|XP_003497743.1| PREDICTED: pre-mRNA branch site protein p14-like [Cricetulus
griseus]
gi|395828654|ref|XP_003787483.1| PREDICTED: pre-mRNA branch site protein p14-like [Otolemur
garnettii]
gi|397513567|ref|XP_003827083.1| PREDICTED: pre-mRNA branch site protein p14-like [Pan paniscus]
gi|402890210|ref|XP_003908383.1| PREDICTED: pre-mRNA branch site protein p14-like [Papio anubis]
gi|403288191|ref|XP_003935296.1| PREDICTED: pre-mRNA branch site protein p14-like [Saimiri
boliviensis boliviensis]
gi|410955738|ref|XP_003984508.1| PREDICTED: pre-mRNA branch site protein p14-like [Felis catus]
gi|426223204|ref|XP_004005767.1| PREDICTED: pre-mRNA branch site protein p14-like [Ovis aries]
gi|12585536|sp|Q9Y3B4.1|PM14_HUMAN RecName: Full=Pre-mRNA branch site protein p14; AltName: Full=SF3b
14 kDa subunit
gi|31563064|sp|P59708.1|PM14_MOUSE RecName: Full=Pre-mRNA branch site protein p14; AltName: Full=SF3b
14 kDa subunit
gi|88192891|pdb|2F9D|A Chain A, 2.5 Angstrom Resolution Structure Of The Spliceosomal
Protein P14 Bound To Region Of Sf3b155
gi|88192892|pdb|2F9D|B Chain B, 2.5 Angstrom Resolution Structure Of The Spliceosomal
Protein P14 Bound To Region Of Sf3b155
gi|4929689|gb|AAD34105.1|AF151868_1 CGI-110 protein [Homo sapiens]
gi|6841570|gb|AAF29138.1|AF161523_1 HSPC175 [Homo sapiens]
gi|9963797|gb|AAG09698.1|AF184213_1 ht006 protein [Homo sapiens]
gi|15278118|gb|AAK94041.1|AF401310_1 pre-mRNA branch site protein p14 [Homo sapiens]
gi|12832311|dbj|BAB22052.1| unnamed protein product [Mus musculus]
gi|12834501|dbj|BAB22936.1| unnamed protein product [Mus musculus]
gi|15930037|gb|AAH15463.1| Splicing factor 3B, 14 kDa subunit [Homo sapiens]
gi|18044537|gb|AAH19535.1| RIKEN cDNA 0610009D07 gene [Mus musculus]
gi|47939375|gb|AAH71385.1| Splicing factor 3B [Danio rerio]
gi|62822095|gb|AAY14664.1| unknown [Homo sapiens]
gi|74196049|dbj|BAE30577.1| unnamed protein product [Mus musculus]
gi|86438283|gb|AAI12549.1| Splicing factor 3B, 14 kDa subunit [Bos taurus]
gi|119621172|gb|EAX00767.1| splicing factor 3B, 14 kDa subunit [Homo sapiens]
gi|148669408|gb|EDL01355.1| RIKEN cDNA 0610009D07 [Mus musculus]
gi|149050875|gb|EDM03048.1| rCG61901 [Rattus norvegicus]
gi|189053227|dbj|BAG34849.1| unnamed protein product [Homo sapiens]
gi|261858822|dbj|BAI45933.1| pre-mRNA branch site protein p14 [synthetic construct]
gi|296482273|tpg|DAA24388.1| TPA: splicing factor 3B, 14 kDa subunit [Bos taurus]
gi|300676844|gb|ADK26719.1| splicing factor 3B, 14 kDa subunit [Zonotrichia albicollis]
gi|300676940|gb|ADK26811.1| splicing factor 3B, 14 kDa subunit [Zonotrichia albicollis]
gi|325463841|gb|ADZ15691.1| splicing factor 3B, 14 kDa subunit [synthetic construct]
gi|344235775|gb|EGV91878.1| Pre-mRNA branch site protein p14 [Cricetulus griseus]
gi|355565504|gb|EHH21933.1| hypothetical protein EGK_05107 [Macaca mulatta]
gi|355751150|gb|EHH55405.1| hypothetical protein EGM_04613 [Macaca fascicularis]
gi|380813652|gb|AFE78700.1| pre-mRNA branch site protein p14 [Macaca mulatta]
gi|383419083|gb|AFH32755.1| pre-mRNA branch site protein p14 [Macaca mulatta]
gi|384947612|gb|AFI37411.1| pre-mRNA branch site protein p14 [Macaca mulatta]
gi|387017758|gb|AFJ50997.1| Pre-mRNA branch site protein p14 [Crotalus adamanteus]
gi|410215904|gb|JAA05171.1| splicing factor 3B, 14 kDa subunit [Pan troglodytes]
gi|410258838|gb|JAA17386.1| splicing factor 3B, 14 kDa subunit [Pan troglodytes]
gi|410287438|gb|JAA22319.1| splicing factor 3B, 14 kDa subunit [Pan troglodytes]
gi|410337113|gb|JAA37503.1| splicing factor 3B, 14 kDa subunit [Pan troglodytes]
gi|417395967|gb|JAA45017.1| Putative splicing factor 3b 14 kda subunit-like protein [Desmodus
rotundus]
gi|431911879|gb|ELK14023.1| Pre-mRNA branch site protein p14 [Pteropus alecto]
gi|432096839|gb|ELK27417.1| Pre-mRNA branch site protein p14 [Myotis davidii]
gi|440906084|gb|ELR56389.1| Pre-mRNA branch site protein p14 [Bos grunniens mutus]
gi|449272599|gb|EMC82439.1| Pre-mRNA branch site protein p14 [Columba livia]
Length = 125
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 100/121 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|340718312|ref|XP_003397613.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Bombus
terrestris]
gi|350409879|ref|XP_003488874.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Bombus
impatiens]
gi|380012472|ref|XP_003690305.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Apis florea]
gi|383849069|ref|XP_003700169.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Megachile
rotundata]
Length = 125
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 98/118 (83%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 8 RRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYED 67
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +E+ K++ KY ++ + K
Sbjct: 68 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDVDKKMEEIDKLKTKYNLNEEKK 125
>gi|348506404|ref|XP_003440749.1| PREDICTED: pre-mRNA branch site protein p14-like [Oreochromis
niloticus]
gi|410916077|ref|XP_003971513.1| PREDICTED: pre-mRNA branch site protein p14-like [Takifugu
rubripes]
gi|47222698|emb|CAG00132.1| unnamed protein product [Tetraodon nigroviridis]
gi|328677147|gb|AEB31296.1| hypothetical protein [Epinephelus bruneus]
Length = 125
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LYVRNLP+ I++EEMYDIFGKYG IRQIR G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|307187454|gb|EFN72538.1| Pre-mRNA branch site p14-like protein [Camponotus floridanus]
gi|332016580|gb|EGI57461.1| Pre-mRNA branch site p14-like protein [Acromyrmex echinatior]
Length = 125
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 98/118 (83%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 8 RRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYED 67
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK ++L K++ KY ++ + K
Sbjct: 68 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRIDVDKKMEDLDKLKTKYNLNDEKK 125
>gi|159478695|ref|XP_001697436.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274315|gb|EDP00098.1| predicted protein [Chlamydomonas reinhardtii]
Length = 129
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 94/107 (87%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPPEVNR L+VRNLPFNISS+EMYDIFGKYG IRQIRIG++K+ RGTA+VVYEDIYDAKT
Sbjct: 13 LPPEVNRALFVRNLPFNISSDEMYDIFGKYGPIRQIRIGTTKEARGTAYVVYEDIYDAKT 72
Query: 73 AVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
A DHLSGFNVANRYLIVLY+ + +KK K+++++L KMQ KYGV
Sbjct: 73 ACDHLSGFNVANRYLIVLYFNPVRHNKKVSTKEQEEQLQKMQNKYGV 119
>gi|62857825|ref|NP_001017249.1| splicing factor 3B, 14 kDa subunit [Xenopus (Silurana) tropicalis]
gi|89267868|emb|CAJ82723.1| splicing factor 3B, 14 kDa subunit (sf3b14) [Xenopus (Silurana)
tropicalis]
gi|169641810|gb|AAI60412.1| hypothetical protein LOC550003 [Xenopus (Silurana) tropicalis]
Length = 125
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I+ EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITGEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|224924352|gb|ACN69126.1| putative RNA-binding protein [Stomoxys calcitrans]
Length = 120
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/117 (67%), Positives = 96/117 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LYVRNLP+ I+SEEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 3 KRNNIRLPPEVNRLLYVRNLPYKITSEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYED 62
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL ++ KY + T +
Sbjct: 63 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRLDVDKKQEELNNIKTKYNLKTPE 119
>gi|307111934|gb|EFN60168.1| hypothetical protein CHLNCDRAFT_33701 [Chlorella variabilis]
Length = 130
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 95/108 (87%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLPPEVNRVLYVRNLPF++S+EE+Y +FGKYGAIRQIR+G+SKDTRGTA++VYEDI+DAK
Sbjct: 13 RLPPEVNRVLYVRNLPFSMSAEELYALFGKYGAIRQIRVGNSKDTRGTAYIVYEDIFDAK 72
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
TAVDHLSGFNV NRYLI+LYY T+ K K ++ EL +MQEK+GV
Sbjct: 73 TAVDHLSGFNVQNRYLIILYYNSTRHKTKVGLKDQEAELRRMQEKHGV 120
>gi|225707236|gb|ACO09464.1| Pre-mRNA branch site protein p14 [Osmerus mordax]
Length = 125
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 100/121 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ ++RGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPESRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|322782976|gb|EFZ10694.1| hypothetical protein SINV_13469 [Solenopsis invicta]
Length = 130
Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 96/114 (84%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 14 RRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYED 73
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK ++L K++ KY ++
Sbjct: 74 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRIDVDKKMEDLDKLKTKYNLN 127
>gi|351713076|gb|EHB15995.1| Pre-mRNA branch site protein p14 [Heterocephalus glaber]
Length = 123
Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 98/115 (85%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA+VVYED
Sbjct: 5 KRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
I+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++T
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINT 119
>gi|229366700|gb|ACQ58330.1| Pre-mRNA branch site protein p14 [Anoplopoma fimbria]
gi|229367116|gb|ACQ58538.1| Pre-mRNA branch site protein p14 [Anoplopoma fimbria]
gi|229368134|gb|ACQ59047.1| Pre-mRNA branch site protein p14 [Anoplopoma fimbria]
Length = 125
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LYVRNLP+ I++EEMYDIFGKYG IRQIR G++ ++RGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|256076700|ref|XP_002574648.1| hypothetical protein [Schistosoma mansoni]
gi|56755841|gb|AAW26099.1| SJCHGC06168 protein [Schistosoma japonicum]
gi|350645287|emb|CCD60002.1| hypothetical protein Smp_032060 [Schistosoma mansoni]
Length = 123
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 97/115 (84%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK RLPPEVNR+L V+NLP+NIS+EEMYDIFGKYGAIRQIRIG++ +T+GTA V+YED
Sbjct: 5 RKNATRLPPEVNRILLVKNLPYNISAEEMYDIFGKYGAIRQIRIGNTPETKGTALVIYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
I+DAK A DHLSGFNV NRYL+VLYYQ+ K KK D KK +EL +++ KYG++T
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQRNKQFKKTDVDKKKEELDRLKAKYGLNT 119
>gi|156546831|ref|XP_001606302.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Nasonia
vitripennis]
Length = 125
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 97/118 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 8 RRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYED 67
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +E+ K++ K+ ++ K
Sbjct: 68 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDVDKKLEEIDKLKTKFNLNEDKK 125
>gi|296479776|tpg|DAA21891.1| TPA: splicing factor 3B, 14 kDa subunit-like [Bos taurus]
Length = 125
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 100/121 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVN++LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNQILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+V+YEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVIYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|148225624|ref|NP_001079940.1| splicing factor 3B, 14 kDa subunit [Xenopus laevis]
gi|34785490|gb|AAH57709.1| MGC68842 protein [Xenopus laevis]
Length = 125
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I+ EEMYDIFGKYG IRQIR+G++ ++RGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITGEEMYDIFGKYGPIRQIRVGNTPESRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNPNRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|432945669|ref|XP_004083713.1| PREDICTED: pre-mRNA branch site protein p14-like [Oryzias latipes]
gi|209730926|gb|ACI66332.1| Pre-mRNA branch site protein p14 [Salmo salar]
gi|209734174|gb|ACI67956.1| Pre-mRNA branch site protein p14 [Salmo salar]
gi|209734452|gb|ACI68095.1| Pre-mRNA branch site protein p14 [Salmo salar]
gi|209737436|gb|ACI69587.1| Pre-mRNA branch site protein p14 [Salmo salar]
gi|209737848|gb|ACI69793.1| Pre-mRNA branch site protein p14 [Salmo salar]
gi|225717036|gb|ACO14364.1| Pre-mRNA branch site protein p14 [Esox lucius]
gi|303658613|gb|ADM15925.1| Pre-mRNA branch site protein p14 [Salmo salar]
gi|303660457|gb|ADM15996.1| Pre-mRNA branch site protein p14 [Salmo salar]
Length = 125
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR G++ ++RGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|88192897|pdb|2F9J|A Chain A, 3.0 Angstrom Resolution Structure Of A Y22m Mutant Of The
Spliceosomal Protein P14 Bound To A Region Of Sf3b155
gi|88192899|pdb|2F9J|B Chain B, 3.0 Angstrom Resolution Structure Of A Y22m Mutant Of The
Spliceosomal Protein P14 Bound To A Region Of Sf3b155
Length = 125
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 99/121 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+L +RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILMIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|340381322|ref|XP_003389170.1| PREDICTED: pre-mRNA branch site protein p14-like [Amphimedon
queenslandica]
Length = 125
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 95/119 (79%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA R+ N RLPPEVNR+LYVRNLPF +S+EEMYDIFGKYG IRQIR+G + +TRGTA
Sbjct: 1 MALAAARRANVRLPPEVNRILYVRNLPFEVSTEEMYDIFGKYGPIRQIRLGIAPNTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
FVVYEDI+DAK A +HLSGFNV NRYL+VLYYQ K KK ++ K D++ ++ KYG+
Sbjct: 61 FVVYEDIFDAKNACEHLSGFNVCNRYLVVLYYQPHKAFKKMNKDLKQDQIELLKTKYGI 119
>gi|358340781|dbj|GAA48607.1| pre-mRNA branch site protein p14 [Clonorchis sinensis]
Length = 123
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 96/115 (83%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK RLPPEVNRVL V+NLP+NIS+EEMYDIFGKYGAIRQIRIG++ +T+GT V+YED
Sbjct: 5 RKNATRLPPEVNRVLLVKNLPYNISAEEMYDIFGKYGAIRQIRIGNTPETKGTGLVIYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
I+DAK A DHLSGFNV NRYL+VLYYQ+ K KK D KK +EL +++ KYG++T
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQRHKQFKKTDVDKKKEELDRLKAKYGLNT 119
>gi|156541620|ref|XP_001600639.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Nasonia
vitripennis]
Length = 126
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 97/118 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 8 RRANVRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYED 67
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +E+ K++ ++ ++ K
Sbjct: 68 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDVDKKLEEIDKLKTQFNLNDDTK 125
>gi|289743103|gb|ADD20299.1| splicing factor 3B [Glossina morsitans morsitans]
Length = 121
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 96/117 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LYVRNLP+ I+S+EMYDIFGK+GAIRQIR+G++ +TRGTAFVVYED
Sbjct: 3 KRNNIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYED 62
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL ++ KY + T +
Sbjct: 63 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRLDIDKKQEELNNIKSKYNLKTPE 119
>gi|320089797|pdb|3LQV|A Chain A, Branch Recognition By Sf3b14
gi|320089798|pdb|3LQV|B Chain B, Branch Recognition By Sf3b14
Length = 115
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 97/110 (88%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA+VVYEDI+DAK
Sbjct: 2 RLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAK 61
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
AVDHLSGFNV+NRYL+VLYY + +K D KKK+++L ++EKYG++T
Sbjct: 62 NAVDHLSGFNVSNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINT 111
>gi|339237409|ref|XP_003380259.1| Pre-mRNA branch site protein p14 [Trichinella spiralis]
gi|316976934|gb|EFV60125.1| Pre-mRNA branch site protein p14 [Trichinella spiralis]
Length = 126
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 93/114 (81%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK N RLPPEVNR+LYV+NLP+ I+ EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYED
Sbjct: 5 RKANVRLPPEVNRILYVKNLPYKITGEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I+DAK A DHLSGFNV NRYL+VLYYQ K + D +K EL +++ KYG+
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQANKAYLRMDTEKSKKELERVKAKYGLG 118
>gi|298712259|emb|CBJ26710.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 94/112 (83%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLPPEVNR +YVRNLPF IS++EMYDIFGKYGAIRQIR+G +DTRGTAFVVY+DIYDAK
Sbjct: 2 RLPPEVNRAVYVRNLPFKISADEMYDIFGKYGAIRQIRLGDRQDTRGTAFVVYDDIYDAK 61
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
AVDHLSGFNV RYLIVLYYQ KM+K+ DQ+ K EL +++ K V+ ++
Sbjct: 62 AAVDHLSGFNVCGRYLIVLYYQPAKMAKRMDQQAKKKELEELRAKLKVAREE 113
>gi|195015240|ref|XP_001984164.1| GH16287 [Drosophila grimshawi]
gi|195377052|ref|XP_002047306.1| GJ12004 [Drosophila virilis]
gi|193897646|gb|EDV96512.1| GH16287 [Drosophila grimshawi]
gi|194154464|gb|EDW69648.1| GJ12004 [Drosophila virilis]
Length = 121
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 96/117 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LYVRNLP+ I+S+EMYDIFGK+GAIRQIR+G++ +TRGTAFVVYED
Sbjct: 3 KRNNIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYED 62
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL ++ KY + T +
Sbjct: 63 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDVDKKQEELNNIKSKYNLKTPE 119
>gi|195127001|ref|XP_002007957.1| GI13232 [Drosophila mojavensis]
gi|193919566|gb|EDW18433.1| GI13232 [Drosophila mojavensis]
Length = 121
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 96/117 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LYVRNLP+ I+S+EMYDIFGK+GAIRQIR+G++ +TRGTAFVVYED
Sbjct: 3 KRNNIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYED 62
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL ++ KY + T +
Sbjct: 63 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDVDKKQEELNNIKSKYNLKTPE 119
>gi|281344992|gb|EFB20576.1| hypothetical protein PANDA_001706 [Ailuropoda melanoleuca]
gi|444516298|gb|ELV11100.1| Pre-mRNA branch site protein p14, partial [Tupaia chinensis]
Length = 115
Score = 170 bits (431), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 95/110 (86%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA+VVYEDI+DAK
Sbjct: 2 RLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAK 61
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++T
Sbjct: 62 NACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINT 111
>gi|238231623|ref|NP_001153997.1| Pre-mRNA branch site protein p14 [Oncorhynchus mykiss]
gi|225703286|gb|ACO07489.1| Pre-mRNA branch site protein p14 [Oncorhynchus mykiss]
Length = 125
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 98/121 (80%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR G++ ++RGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMGTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|308812460|ref|XP_003083537.1| putative RNA binding protein (ISS) [Ostreococcus tauri]
gi|116055418|emb|CAL58086.1| putative RNA binding protein (ISS) [Ostreococcus tauri]
Length = 122
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 101/120 (84%), Gaps = 2/120 (1%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
M + R+ +RLPPEVNR+LYVRNLPFN++SE+M++IFGK+GA+RQIR+GS K+T+GTA
Sbjct: 1 MTSTSSRQLTSRLPPEVNRILYVRNLPFNVTSEDMHEIFGKFGALRQIRLGSQKNTKGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAKTA +HLSGFNVANRYLIV+Y+Q +M + + KK +E ++QE +GV+
Sbjct: 61 YVVYEDIWDAKTACEHLSGFNVANRYLIVMYHQSARMRESVE--KKREETRRLQETHGVT 118
>gi|21357707|ref|NP_648037.1| CG13298 [Drosophila melanogaster]
gi|125980386|ref|XP_001354217.1| GA12181 [Drosophila pseudoobscura pseudoobscura]
gi|194752207|ref|XP_001958414.1| GF10910 [Drosophila ananassae]
gi|194867575|ref|XP_001972100.1| GG14070 [Drosophila erecta]
gi|195167582|ref|XP_002024612.1| GL22529 [Drosophila persimilis]
gi|195337891|ref|XP_002035559.1| GM13852 [Drosophila sechellia]
gi|195492249|ref|XP_002093910.1| GE20495 [Drosophila yakuba]
gi|195588202|ref|XP_002083847.1| GD13137 [Drosophila simulans]
gi|32699626|sp|Q9VRV7.1|PM14_DROME RecName: Full=Pre-mRNA branch site p14-like protein
gi|7295357|gb|AAF50675.1| CG13298 [Drosophila melanogaster]
gi|19528453|gb|AAL90341.1| RE19804p [Drosophila melanogaster]
gi|38048139|gb|AAR09972.1| similar to Drosophila melanogaster CG13298, partial [Drosophila
yakuba]
gi|54642523|gb|EAL31270.1| GA12181 [Drosophila pseudoobscura pseudoobscura]
gi|190625696|gb|EDV41220.1| GF10910 [Drosophila ananassae]
gi|190653883|gb|EDV51126.1| GG14070 [Drosophila erecta]
gi|194108017|gb|EDW30060.1| GL22529 [Drosophila persimilis]
gi|194128652|gb|EDW50695.1| GM13852 [Drosophila sechellia]
gi|194180011|gb|EDW93622.1| GE20495 [Drosophila yakuba]
gi|194195856|gb|EDX09432.1| GD13137 [Drosophila simulans]
gi|220948128|gb|ACL86607.1| CG13298-PA [synthetic construct]
gi|220957372|gb|ACL91229.1| CG13298-PA [synthetic construct]
Length = 121
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 96/117 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ + RLPPEVNR+LYVRNLP+ I+S+EMYDIFGK+GAIRQIR+G++ +TRGTAFVVYED
Sbjct: 3 KRNHIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYED 62
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
I+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL ++ KY + T +
Sbjct: 63 IFDAKNACDHLSGFNVCNRYLVVLYYQSNKAFKRVDMDKKQEELNNIKAKYNLKTPE 119
>gi|225703554|gb|ACO07623.1| Pre-mRNA branch site protein p14 [Oncorhynchus mykiss]
Length = 125
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 98/121 (80%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR G++ ++RGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VL Y + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNAYDHLSGFNVCNRYLVVLCYNANRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|195427713|ref|XP_002061921.1| GK17258 [Drosophila willistoni]
gi|194158006|gb|EDW72907.1| GK17258 [Drosophila willistoni]
Length = 121
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 93/112 (83%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLPPEVNR+LYVRNLP+ I+S+EMYDIFGK+GAIRQIR+G++ +TRGTAFVVYEDI+DAK
Sbjct: 8 RLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAK 67
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL ++ KY + T +
Sbjct: 68 NACDHLSGFNVCNRYLVVLYYQSNKAFKRVDMDKKQEELNNIKAKYNLKTPE 119
>gi|307192327|gb|EFN75593.1| Pre-mRNA branch site p14-like protein [Harpegnathos saltator]
Length = 114
Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 95/114 (83%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
RLPPEVNRVLY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYEDI+DA
Sbjct: 1 VRLPPEVNRVLYIRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTAFVVYEDIFDA 60
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
K A DHLSGFNV NRYL+VLYYQ K K+ D KK ++L K++ K+ ++ + K
Sbjct: 61 KNACDHLSGFNVCNRYLVVLYYQSNKAFKRIDVDKKMEDLDKLKTKFNLNDEKK 114
>gi|242025590|ref|XP_002433207.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518748|gb|EEB20469.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 126
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 100/123 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LYVRNLP+ I+ EEMYDIFGKYGAIRQIR+G++ DTRGTA
Sbjct: 1 MAMAMQKRANVRLPPEVNRILYVRNLPYKITGEEMYDIFGKYGAIRQIRVGNTPDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV NRYL+VLYYQ K K+ D KK +EL K++ KY +S
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYQANKAFKRLDVDKKKEELEKVKTKYNIS 120
Query: 121 TKD 123
++D
Sbjct: 121 SED 123
>gi|145354613|ref|XP_001421574.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581812|gb|ABO99867.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 122
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 100/120 (83%), Gaps = 6/120 (5%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
+A+ PL ARLPPEVNR LYVRNLPFN+SSE+M++IFGKYGA+RQIR+G++K T+GTA
Sbjct: 5 LASRPL----ARLPPEVNRTLYVRNLPFNVSSEDMHEIFGKYGALRQIRLGTTKATKGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A +HLSGFNVANRYLIVLY+Q K ++ + ++ E A++Q ++GVS
Sbjct: 61 YVVYEDIHDAKQACEHLSGFNVANRYLIVLYHQSGKATQSVE--RRAAETARLQREHGVS 118
>gi|71984310|ref|NP_493659.3| Protein C50D2.5 [Caenorhabditis elegans]
gi|82592517|sp|Q8ITY4.2|PM14_CAEEL RecName: Full=Pre-mRNA branch site p14-like protein
gi|351050745|emb|CCD65337.1| Protein C50D2.5 [Caenorhabditis elegans]
Length = 138
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 99/120 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + A+LPPEVNR+LY++NLP+ I++EEMY+IFGK+GA+RQIR+G++ +TRGTA
Sbjct: 1 MAMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAKTA +HLSG+NV+NRYL+VLYYQ TK K+ D +K +L ++E+YG+
Sbjct: 61 FVVYEDIFDAKTACEHLSGYNVSNRYLVVLYYQATKAWKRMDTEKARTKLEDIKERYGIG 120
>gi|308461026|ref|XP_003092810.1| hypothetical protein CRE_22109 [Caenorhabditis remanei]
gi|308252474|gb|EFO96426.1| hypothetical protein CRE_22109 [Caenorhabditis remanei]
gi|341896793|gb|EGT52728.1| hypothetical protein CAEBREN_08400 [Caenorhabditis brenneri]
Length = 138
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 99/120 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + A+LPPEVNR+LY++NLP+ I++EEMY+IFGK+GA+RQIR+G++ +TRGTA
Sbjct: 1 MAMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAKTA +HLSG+NV+NRYL+VLYYQ TK K+ D +K +L ++E+YG+
Sbjct: 61 FVVYEDIFDAKTACEHLSGYNVSNRYLVVLYYQATKAWKRMDTEKARAKLEDIKERYGIG 120
>gi|268534002|ref|XP_002632131.1| Hypothetical protein CBG06987 [Caenorhabditis briggsae]
Length = 138
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 99/120 (82%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA + A+LPPEVNR+LY++NLP+ I++EEMY+IFGK+GA+RQIR+G++ +TRGTA
Sbjct: 1 MAMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAKTA +HLSG+NV+NRYL+VLYYQ TK K+ D +K +L ++E+YG+
Sbjct: 61 FVVYEDIFDAKTACEHLSGYNVSNRYLVVLYYQATKAWKRMDTEKARAKLEDIKERYGIG 120
>gi|255080128|ref|XP_002503644.1| predicted protein [Micromonas sp. RCC299]
gi|226518911|gb|ACO64902.1| predicted protein [Micromonas sp. RCC299]
Length = 94
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/93 (82%), Positives = 84/93 (90%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
NARLPPEVNR LYVRNLPFNI+++EMYDIFGKYGAIRQIR+G +DTRGTA+VVYEDIYD
Sbjct: 2 NARLPPEVNRALYVRNLPFNITADEMYDIFGKYGAIRQIRLGDKRDTRGTAYVVYEDIYD 61
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFD 102
AK AVDHLSGFNVANRYLIVLYY K +KK D
Sbjct: 62 AKNAVDHLSGFNVANRYLIVLYYNPAKTAKKRD 94
>gi|156371326|ref|XP_001628715.1| predicted protein [Nematostella vectensis]
gi|156215699|gb|EDO36652.1| predicted protein [Nematostella vectensis]
Length = 123
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 100/120 (83%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA RK N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYGAIRQIR+G++ DTRGTA
Sbjct: 1 MAMQSQRKANVRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGAIRQIRLGNAPDTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
FVVYEDI+DAK A DHLSGFNV RYL+VLYYQ K +K D++KK EL KM+EKYG++
Sbjct: 61 FVVYEDIFDAKNACDHLSGFNVCGRYLVVLYYQSNKAFQKLDKEKKKQELEKMKEKYGIN 120
>gi|312074002|ref|XP_003139774.1| hypothetical protein LOAG_04189 [Loa loa]
gi|307765058|gb|EFO24292.1| hypothetical protein LOAG_04189 [Loa loa]
Length = 187
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 95/114 (83%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R N +LPPEVNR+LYV+NLP+ I+SEEMYDIFGK+GA+RQIR+G++ +TRGTAFVVYED
Sbjct: 55 RGRNQKLPPEVNRILYVKNLPYKITSEEMYDIFGKFGAVRQIRVGNTAETRGTAFVVYED 114
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I+DAK A +HLSGFNV+NRYL+VLYYQ TK ++ D K + L +++E+Y +
Sbjct: 115 IFDAKNACEHLSGFNVSNRYLVVLYYQATKAYRRMDTDKAKERLEEIKERYNLG 168
>gi|328766633|gb|EGF76686.1| hypothetical protein BATDEDRAFT_92475 [Batrachochytrium
dendrobatidis JAM81]
Length = 118
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 95/112 (84%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+ N RLPPEVNR+L++RNLP+ I++E+MYD+FGKYG+IRQIR+G+++DTRGTAFV+Y+DI
Sbjct: 6 RANVRLPPEVNRILFIRNLPYKITTEDMYDLFGKYGSIRQIRMGNAQDTRGTAFVIYDDI 65
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
+DAK A DHLSGFN+ RYL+VLY+ TK +KK D +K+ E+ M+ KYGV
Sbjct: 66 FDAKAACDHLSGFNLQGRYLVVLYFSSTKTNKKRDLNEKEAEIESMKRKYGV 117
>gi|444707803|gb|ELW48977.1| Pre-mRNA branch site protein p14 [Tupaia chinensis]
Length = 123
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 95/115 (82%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N +LPPEVNR+LY+RNLP+ I++EEMYDIFGKYG +RQIR+ ++ +TRGTA+VVYED
Sbjct: 5 KRANIQLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPVRQIRVRNTPETRGTAYVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
I+DAK DHLSGFNV NRY +VLYY + +K D KKK+++L ++EKYG++T
Sbjct: 65 IFDAKNVCDHLSGFNVCNRYFVVLYYNANRAFQKMDTKKKEEQLKFLKEKYGINT 119
>gi|428166165|gb|EKX35146.1| hypothetical protein GUITHDRAFT_90342 [Guillardia theta CCMP2712]
Length = 128
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 97/115 (84%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+ NARLPPEVNR+L+VRNLPF I++EE+YD+FG+YGAIRQIR G++KDTRGTAFVVYEDI
Sbjct: 14 RANARLPPEVNRILFVRNLPFKITAEELYDLFGRYGAIRQIRKGNTKDTRGTAFVVYEDI 73
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
YDAK A D+LSGF+V +RYLIVLYYQ K +KK +K+ +EL +++ K+ S +
Sbjct: 74 YDAKNACDNLSGFHVLDRYLIVLYYQPNKQTKKVLLEKQQEELEQIKAKFASSQQ 128
>gi|291243257|ref|XP_002741522.1| PREDICTED: splicing factor 3B, 14 kDa subunit-like [Saccoglossus
kowalevskii]
Length = 121
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 98/116 (84%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+ N RLPPEVNR+LYVRNLP+ I++EEMYDIFGKYGAIRQIR+G + +T+GTA+V+YED
Sbjct: 5 RRQNVRLPPEVNRILYVRNLPYKITAEEMYDIFGKYGAIRQIRVGYTPETKGTAYVIYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
I+DAK A DHLSGFNV NRYL+VLYYQ + KK DQ KK +EL K++ KYG++ K
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQANRAFKKMDQTKKKEELDKLKSKYGLNDK 120
>gi|324533471|gb|ADY49309.1| Pre-mRNA branch site p14-like protein [Ascaris suum]
Length = 138
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 96/114 (84%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R N +LPPEVNR+LYV+NLP+ I+SEEMYDIFGK+GA+RQIR+G++ +TRGTAFVVYED
Sbjct: 6 RGRNQKLPPEVNRILYVKNLPYKITSEEMYDIFGKFGAVRQIRVGNTSETRGTAFVVYED 65
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I+DAK A +HLSGFNV+NRYL+VLYYQ TK ++ D +K + L +++++Y +
Sbjct: 66 IFDAKNACEHLSGFNVSNRYLVVLYYQATKAYRRMDTEKAKERLEEIKDRYNLG 119
>gi|313238296|emb|CBY13381.1| unnamed protein product [Oikopleura dioica]
gi|313246212|emb|CBY35146.1| unnamed protein product [Oikopleura dioica]
gi|313246303|emb|CBY35226.1| unnamed protein product [Oikopleura dioica]
Length = 122
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 97/119 (81%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA P K +LPPEVNR+LYVRNLP+ I++EE+YDIFGK+GA+RQ+RIG + +T+GTA
Sbjct: 1 MAMNPAAKFKIKLPPEVNRILYVRNLPYKITTEELYDIFGKFGALRQVRIGVTAETKGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
+V+YEDI+DAK A DHLSGFNV NRYL+VLYY + KK + +KK+ ELA+++++ G+
Sbjct: 61 YVIYEDIHDAKNACDHLSGFNVCNRYLVVLYYNPARAFKKLETEKKEAELAEIRKRMGL 119
>gi|126343769|ref|XP_001364306.1| PREDICTED: pre-mRNA branch site protein p14-like [Monodelphis
domestica]
Length = 125
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 96/121 (79%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRY Q+ + +K D KKK+++L ++EKYG++
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYPRGALLQRHRAFQKMDTKKKEEQLKLLKEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|424513479|emb|CCO66101.1| predicted protein [Bathycoccus prasinos]
Length = 135
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+ +LPPEVNR+LYVRNLPFNI+ E+MYDIFGKYGAIRQIRIG ++DT+GTA+VVYEDIY
Sbjct: 19 AHKKLPPEVNRILYVRNLPFNITDEDMYDIFGKYGAIRQIRIGQTRDTKGTAYVVYEDIY 78
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
DAK A++ LSGFNVANRYLIVLY+ +K ++K +K+++ L ++Q+K GVS
Sbjct: 79 DAKAALEKLSGFNVANRYLIVLYFNLSKFAQK-QLEKEEENLRRLQKKEGVS 129
>gi|403343577|gb|EJY71122.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 117
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 92/112 (82%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K N RLPPEVNR+++VRNLPF I+S+E++DIFGKYGA+RQIR G++ T+GTAFVVYEDI
Sbjct: 6 KSNTRLPPEVNRIVFVRNLPFKITSDELFDIFGKYGALRQIRKGNAGKTKGTAFVVYEDI 65
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
YDAK AVDHL+GFNVA +YLI LYYQ K++KK D K EL ++EKY +
Sbjct: 66 YDAKNAVDHLNGFNVAGKYLICLYYQPNKLNKKTDTGKVKQELNYLKEKYNI 117
>gi|240985422|ref|XP_002404053.1| conserved hypothetical protein [Ixodes scapularis]
gi|215491479|gb|EEC01120.1| conserved hypothetical protein [Ixodes scapularis]
Length = 95
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 82/90 (91%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
RLPPEVNR+LYVRNLP+ IS EEMYDIFGKYGAIRQIR+G++ +TRGTAFVVYEDI+DA
Sbjct: 6 VRLPPEVNRILYVRNLPYKISGEEMYDIFGKYGAIRQIRVGNTPETRGTAFVVYEDIFDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKK 100
K A DHLSGFNV NRYL+VLYYQ TK+S+K
Sbjct: 66 KNACDHLSGFNVCNRYLVVLYYQPTKVSEK 95
>gi|384487746|gb|EIE79926.1| hypothetical protein RO3G_04631 [Rhizopus delemar RA 99-880]
Length = 119
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 97/112 (86%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K + RLPPEVNRVL+VRNLPF I++EEMY++FGKYG IRQIR+G++ DTRGTAFVVYEDI
Sbjct: 6 KSSTRLPPEVNRVLFVRNLPFKITTEEMYEVFGKYGPIRQIRVGNATDTRGTAFVVYEDI 65
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
YDAK A +HL GFN+ RYLIVLYYQQ K++KK + +KK++E+ +M+ +YGV
Sbjct: 66 YDAKNACEHLQGFNILGRYLIVLYYQQNKVTKKMNIQKKEEEIKEMKARYGV 117
>gi|29841272|gb|AAP06304.1| similar to GenBank Accession Number AE003563 CG13298 gene product
in Drosophila melanogaster [Schistosoma japonicum]
Length = 110
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK RLPPEVNR+L V+NLP+NIS+EEMYDIFGKYGAIRQIRIG++ +T+GTA V+YED
Sbjct: 5 RKNATRLPPEVNRILLVKNLPYNISAEEMYDIFGKYGAIRQIRIGNTPETKGTALVIYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK--FDQKKKD 107
I+DAK A DHLSGFNV NRYL+VLYYQ+ K KK D++KK+
Sbjct: 65 IFDAKNACDHLSGFNVCNRYLVVLYYQRNKQFKKTDVDRRKKN 107
>gi|323448540|gb|EGB04437.1| hypothetical protein AURANDRAFT_32497 [Aureococcus anophagefferens]
Length = 123
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 9/114 (7%)
Query: 8 KGNARLPPEVNRVLYVRNLPFN----ISSEEMYDIFGK--YGAIRQIRIGSSKDTRGTAF 61
+G ARLPPEVNRVLYVRNLPF +S+EE+YDIFGK YGAIRQIRIG+ DTRGTAF
Sbjct: 5 RGAARLPPEVNRVLYVRNLPFKTEEMLSTEEIYDIFGKRVYGAIRQIRIGNRPDTRGTAF 64
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK---FDQKKKDDELAK 112
VVYEDI+DAK AVDHLSGFNV RYLIVLYYQ +M+K+ +QK+ + E K
Sbjct: 65 VVYEDIHDAKNAVDHLSGFNVCGRYLIVLYYQAARMAKRTESLEQKRAELEALK 118
>gi|118377179|ref|XP_001021770.1| RNA binding protein [Tetrahymena thermophila]
gi|89303537|gb|EAS01525.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 137
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 90/105 (85%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+LPPEVNRV+YVRNLP+ IS+EE+YD+FG YG IRQIR G S D +GTAFVVYEDI+DA
Sbjct: 25 VKLPPEVNRVVYVRNLPYKISAEELYDVFGTYGPIRQIRKGVSGDKKGTAFVVYEDIFDA 84
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
KTAV+HL+GFNVA RYLIVLYYQ K++KK D +KK +E+ +++E
Sbjct: 85 KTAVEHLNGFNVAGRYLIVLYYQPHKINKKTDLQKKQEEVDRLKE 129
>gi|149702833|ref|XP_001499164.1| PREDICTED: pre-mRNA branch site protein p14-like [Equus caballus]
Length = 125
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 92/121 (76%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLP EVNRVLY+RNLP I++EEMYDIFGKY RQIR+G++ +TRGT
Sbjct: 1 MAMQAAKRANIRLPLEVNRVLYIRNLPCKITAEEMYDIFGKYRPTRQIRVGNTPETRGTV 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYED++DAK DHLSGFNV NRYL VLYY + +K K+K+++L ++EKYG++
Sbjct: 61 YVVYEDVFDAKNTCDHLSGFNVCNRYLAVLYYSANRAFQKMGTKEKEEQLKLLEEKYGIN 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|440793741|gb|ELR14916.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 128
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYE 65
++ NARLPPEV R+++V+NLPF I+ +EMYDIFGK+GAIRQIR+G++ K+TRGTAFVVYE
Sbjct: 14 KRANARLPPEVGRIVFVKNLPFKITPDEMYDIFGKFGAIRQIRLGTNNKETRGTAFVVYE 73
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
DI+DAK AVDHLSGFN+ RYLIVLY+QQ + +KK DQKKK +E+ +++ KYGV
Sbjct: 74 DIFDAKNAVDHLSGFNIGGRYLIVLYHQQARATKKMDQKKKKEEIDELKNKYGVE 128
>gi|281200901|gb|EFA75115.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 116
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 93/119 (78%), Gaps = 4/119 (3%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MAT+ N RLPPEVNR+L+V+NLPF I+S E+Y++FG YG IRQ+R+G++ DT GTA
Sbjct: 1 MATLK----NQRLPPEVNRILFVKNLPFKITSAEIYELFGAYGGIRQVRLGNASDTMGTA 56
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
FVVY+DI+DA+ A +HLSG+N RYL+VLY+Q K ++K DQ KK EL M++K+G+
Sbjct: 57 FVVYDDIFDARNACEHLSGYNFGGRYLVVLYHQPAKQARKLDQTKKRQELELMKQKFGI 115
>gi|391333076|ref|XP_003740950.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Metaseiulus
occidentalis]
Length = 110
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 83/99 (83%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
RK RL PEVNR+LYVRNLP+ I++EEMYDIFGKYGAIRQIR+G++ +TRGT FVVYED
Sbjct: 5 RKPGTRLAPEVNRILYVRNLPYKITAEEMYDIFGKYGAIRQIRVGNTAETRGTGFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKK 105
I+DAK A +HLSGFN+ NRYL+VLYYQ +K KK D K
Sbjct: 65 IFDAKNACEHLSGFNMCNRYLVVLYYQPSKAFKKVDVDK 103
>gi|429327710|gb|AFZ79470.1| RNA recognition motif RRM, RBD, or RNP domain containing protein
[Babesia equi]
Length = 117
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
+P R+ N RLPPEV+R+LY+RNLPF I++EE+YDIFGKYG++RQIR G+S TRGTA
Sbjct: 2 FGAVPSRR-NIRLPPEVSRILYLRNLPFKITAEELYDIFGKYGSVRQIRKGTSATTRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
FVVY+DIYDAK A DHLSGFNVA RYL+VLY+ TK++KK D ++ EL +++
Sbjct: 61 FVVYDDIYDAKNAYDHLSGFNVAGRYLVVLYFNPTKVNKKKDLDEQQAELNRIRS 115
>gi|294866197|ref|XP_002764630.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|294873200|ref|XP_002766546.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|294932433|ref|XP_002780270.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239864251|gb|EEQ97347.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239867503|gb|EEQ99263.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239890192|gb|EER12065.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 116
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 91/113 (80%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+G RLPPEVNR+LYVRNLP+ I +E+YD+FGK+G+IRQIR G++ T+GTAFV+Y+DI
Sbjct: 4 RGRVRLPPEVNRILYVRNLPYKIKPDELYDVFGKFGSIRQIRKGNAPGTKGTAFVIYDDI 63
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
YDAK AVDHLSGFNVA RYL+ LYY T++ KK D + + +E+ +++ ++ +
Sbjct: 64 YDAKNAVDHLSGFNVAGRYLVCLYYSATRLQKKLDAEGQKEEIERLKREHNIG 116
>gi|452821960|gb|EME28984.1| pre-mRNA branch site protein p14 [Galdieria sulphuraria]
Length = 118
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 83/98 (84%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R G RL PEVNR+LY+RNLPF IS+EEMYDIFGK+GA+RQIR+G++ +TRGTAFV+YED
Sbjct: 20 RPGPTRLAPEVNRILYIRNLPFKISAEEMYDIFGKFGAVRQIRLGNAPNTRGTAFVIYED 79
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQK 104
I DAK A++HLSGFNVA RYLIVLY+Q KM K D K
Sbjct: 80 ILDAKNALEHLSGFNVAGRYLIVLYHQPDKMKKNEDNK 117
>gi|335772422|gb|AEH58061.1| pre-mRNA branch site protein p14-like protein [Equus caballus]
Length = 109
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 83/98 (84%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA 60
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMS 98
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY ++S
Sbjct: 61 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRVS 98
>gi|294891693|ref|XP_002773691.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239878895|gb|EER05507.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 116
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 91/112 (81%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+G RLPPEVNR+LYVRNLP+ I +E+YD+FGK+G+IRQIR G++ T+GTAFV+Y+DI
Sbjct: 4 RGRVRLPPEVNRILYVRNLPYKIKPDELYDVFGKFGSIRQIRKGNAPGTKGTAFVIYDDI 63
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
YDAK AVDHLSGFNVA RYL+ LYY T++ KK D + + +E+ +++ ++ +
Sbjct: 64 YDAKNAVDHLSGFNVAGRYLVCLYYSATRLQKKLDTQGQKEEIERLKREHNL 115
>gi|397613506|gb|EJK62257.1| hypothetical protein THAOC_17140 [Thalassiosira oceanica]
Length = 151
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVY 64
L +RLPPEVNR+LYVRNLPF I+ EE+YDIFGKYGA+ QIR+G KDT+GTAFVVY
Sbjct: 28 LTPNKSRLPPEVNRILYVRNLPFKITPEELYDIFGKYGAVFQIRLGERGKDTKGTAFVVY 87
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
EDIYDAK AVDHLSGFNV RYL+V YYQ K KK D + EL +++
Sbjct: 88 EDIYDAKRAVDHLSGFNVGGRYLVVQYYQPAKFQKKADAESAKKELEELR 137
>gi|167524070|ref|XP_001746371.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775133|gb|EDQ88758.1| predicted protein [Monosiga brevicollis MX1]
Length = 131
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 95/118 (80%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R N RLPPEVNR+LYVRNLPF++++EE++++FGKYG IRQ+R G+ +T+GTA+VVYED
Sbjct: 10 RNTNVRLPPEVNRILYVRNLPFSVTTEELFELFGKYGPIRQMRTGNKPETKGTAYVVYED 69
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
I+DAK A ++LSGFNV RYL V+Y+Q K+ +K D+KK+ +EL K+++K +D+
Sbjct: 70 IFDAKNACENLSGFNVMGRYLTVVYHQVNKLYQKLDRKKEQEELEKLRKKVNAKERDQ 127
>gi|223993935|ref|XP_002286651.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977966|gb|EED96292.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 98
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDA 70
RLPPEVNR+LYVRNLPF I+SEE+YDIFGKYGA+ QIR+G S+DTRGTAFVVYEDIYDA
Sbjct: 1 RLPPEVNRILYVRNLPFRITSEELYDIFGKYGAVYQIRLGEKSRDTRGTAFVVYEDIYDA 60
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKK 106
K AVDHLSGFNV RYL+V+YYQ K ++ D ++K
Sbjct: 61 KRAVDHLSGFNVGGRYLVVMYYQPAKFQRRADAEEK 96
>gi|219120905|ref|XP_002185684.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582533|gb|ACI65154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 102
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDA 70
RLPPEVNR+LYVRNLPF I++EE+Y IFGKYGAI QIR+G KDTRGTAFVVYEDI+DA
Sbjct: 1 RLPPEVNRILYVRNLPFTITAEELYAIFGKYGAIFQIRLGDKDKDTRGTAFVVYEDIFDA 60
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
K+AVDHLSGFNV RYLIVLYYQ K K+ ++K+ EL
Sbjct: 61 KSAVDHLSGFNVGGRYLIVLYYQPAKFEKRAQVEEKEKEL 100
>gi|395854703|ref|XP_003799819.1| PREDICTED: pre-mRNA branch site protein p14-like [Otolemur
garnettii]
Length = 123
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 91/115 (79%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLP +VNR+LY+RNLP+ I++EEMYDIFGKYG I QIR+ ++ +TR TA+VVYED
Sbjct: 5 KRANIRLPSKVNRILYIRNLPYKITAEEMYDIFGKYGPIHQIRVENTPETRETAYVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
I+DA A HLSGFNV NRYL+VLYY + +K D KK++++L ++EKY ++T
Sbjct: 65 IFDATNACHHLSGFNVCNRYLVVLYYNGNRAFQKMDTKKEEEQLKLLKEKYSINT 119
>gi|345305100|ref|XP_003428295.1| PREDICTED: pre-mRNA branch site protein p14-like isoform 2
[Ornithorhynchus anatinus]
Length = 116
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 91/121 (75%), Gaps = 9/121 (7%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFG G++ +TRGTA
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGN---------GNTPETRGTA 51
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L ++EKYG++
Sbjct: 52 YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN 111
Query: 121 T 121
T
Sbjct: 112 T 112
>gi|84994914|ref|XP_952179.1| RNA binding protein [Theileria annulata strain Ankara]
gi|65302340|emb|CAI74447.1| RNA binding protein, putative [Theileria annulata]
Length = 122
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 91/107 (85%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K N RLPPEV+R+LY+RNLP+ I+SEE+YDIFGKYG++RQIR G+S T+GTAFVVY+DI
Sbjct: 9 KKNIRLPPEVSRILYLRNLPYKITSEELYDIFGKYGSVRQIRKGNSATTKGTAFVVYDDI 68
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
+DAK A+DHLSGFNVA RYL+VLYY +++K+ D K++ +L +++
Sbjct: 69 FDAKNALDHLSGFNVAGRYLVVLYYNPARVNKRKDLDKQEADLKRIR 115
>gi|340500545|gb|EGR27413.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 114
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 86/105 (81%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
N RLPPEVNRV+YVRNLP+ I++EE+YD+FG YG IRQIR G D +GTAFV+Y+DI+D
Sbjct: 6 NIRLPPEVNRVVYVRNLPYKITAEELYDVFGNYGPIRQIRKGVVGDKKGTAFVIYDDIFD 65
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
AKTAV+HL+GFNV RYLIVLYYQ K+ KK D KK +E+ +++
Sbjct: 66 AKTAVEHLNGFNVGGRYLIVLYYQPHKLYKKTDLNKKQEEIDRLK 110
>gi|156085236|ref|XP_001610101.1| pre-mRNA branch site protein p14 [Babesia bovis T2Bo]
gi|154797353|gb|EDO06533.1| pre-mRNA branch site protein p14, putative [Babesia bovis]
Length = 122
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 91/110 (82%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RL PEV+R+LY+RNLP+ IS+EE+YDIFGKYG++RQIR G++ T GTAFVVY+DIYDAK
Sbjct: 13 RLSPEVSRILYLRNLPYKISAEELYDIFGKYGSVRQIRKGNTSKTNGTAFVVYDDIYDAK 72
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
A+DHLSGFNVA RYL+VLYY T+++K+ D K+ +EL +++ ++T
Sbjct: 73 NALDHLSGFNVAGRYLVVLYYNPTRLNKRKDLDKEQEELDRVKAALKMNT 122
>gi|145549794|ref|XP_001460576.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428406|emb|CAK93179.1| unnamed protein product [Paramecium tetraurelia]
Length = 117
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 86/104 (82%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLP EVNR+LYVRNLP+ I+SEEMYDIFGK+GAIRQIR G+ D +GTAFVVYEDIYDAK
Sbjct: 7 RLPAEVNRILYVRNLPYKITSEEMYDIFGKFGAIRQIRKGTHGDKKGTAFVVYEDIYDAK 66
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
A D++SGFNVA RYLIVLYYQ KM ++ D + + ++ K++E
Sbjct: 67 NAFDNISGFNVAGRYLIVLYYQPQKMQERQDLEFQRKQIEKLRE 110
>gi|159164545|pdb|2FHO|B Chain B, Nmr Solution Structure Of The Human Spliceosomal Protein
Complex P14-Sf3b155
Length = 87
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+G++ +TRGTA+VVYEDI
Sbjct: 2 RANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDI 61
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQ 93
+DAK A DHLSGFNV NRYL+VLYY
Sbjct: 62 FDAKNACDHLSGFNVCNRYLVVLYYN 87
>gi|66808239|ref|XP_637842.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60466262|gb|EAL64324.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 117
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 90/109 (82%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
++LPPE+NR+LYV+NLPF ISSEE+Y IF YGAIRQIR+G++ +T GTAFVVYEDI+DA
Sbjct: 8 SKLPPEINRILYVKNLPFKISSEELYGIFSNYGAIRQIRLGNTTETMGTAFVVYEDIFDA 67
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
+ A +HLSG+NV NRYL+VLYYQQ K KK D + K EL +++K+G+
Sbjct: 68 RNACEHLSGYNVNNRYLVVLYYQQQKQQKKMDHQAKKKELDLLKQKFGL 116
>gi|145510448|ref|XP_001441157.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408396|emb|CAK73760.1| unnamed protein product [Paramecium tetraurelia]
Length = 117
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/104 (67%), Positives = 85/104 (81%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLP EVNR+LYVRNLP+ I+SEEMYDIFGK+GAIRQIR G+ D +GTAFVVYEDIYD K
Sbjct: 7 RLPAEVNRILYVRNLPYKITSEEMYDIFGKFGAIRQIRKGTHGDKKGTAFVVYEDIYDVK 66
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
A D+LSGFNVA RYLIVLYYQ KM ++ D + + ++ K++E
Sbjct: 67 YAFDNLSGFNVAGRYLIVLYYQPQKMQERQDLEFQRKQIEKLRE 110
>gi|357017179|gb|AET50618.1| hypothetical protein [Eimeria tenella]
Length = 126
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Query: 1 MATIPLRKGNAR---LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
M PL G R L PEV+R+LYVRNLPF I+ EE+YD+FGKYG+IRQIR G+S TR
Sbjct: 1 MQPAPLLAGRGRPQRLAPEVSRILYVRNLPFKINGEELYDVFGKYGSIRQIRRGTSPATR 60
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
GTAFVVY+DIYDAK AVD LSGFNVA RYL+VLYY TK ++ D + + L +++
Sbjct: 61 GTAFVVYDDIYDAKAAVDQLSGFNVAGRYLVVLYYNPTKAQQRRDALEAKETLERLR 117
>gi|320169148|gb|EFW46047.1| pre-mRNA branch site protein p14 [Capsaspora owczarzaki ATCC 30864]
Length = 123
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 91/111 (81%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
++RLP +VNR+L+V+N+PFN++ +++YD+FGKYGAIRQIR+G++ DT+GTA+VVYEDI D
Sbjct: 9 SSRLPKDVNRILFVKNMPFNVADDDLYDLFGKYGAIRQIRVGTAPDTKGTAYVVYEDILD 68
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
A+ A +HLSGFNV RY+ VLYY ++ + D KK +EL K+++++ ++
Sbjct: 69 ARNACEHLSGFNVGGRYITVLYYNPQRLLARMDVNKKREELDKLKQQHNIA 119
>gi|399218183|emb|CCF75070.1| unnamed protein product [Babesia microti strain RI]
Length = 198
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 78/91 (85%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
++RLPPEV R+LY+RNLP+ I+ EE+YDIFGKYG +RQIR G S T+GTAFVVYEDIYD
Sbjct: 104 SSRLPPEVTRILYLRNLPYKITPEELYDIFGKYGPVRQIRRGVSNSTKGTAFVVYEDIYD 163
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKK 100
AK A++HLSGFNVA RYL+VLY+ T++ KK
Sbjct: 164 AKMALEHLSGFNVAGRYLVVLYFNPTRLQKK 194
>gi|403222132|dbj|BAM40264.1| pre-mRNA branch site protein p14 [Theileria orientalis strain
Shintoku]
Length = 181
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 89/119 (74%), Gaps = 14/119 (11%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--------------GSS 53
K N RLPPEV+R+LY+RNLP+ I+SEE+YDIFGKYGA+RQIR G+S
Sbjct: 9 KKNIRLPPEVSRILYLRNLPYKITSEELYDIFGKYGAVRQIRKYIALNISLNSLIFRGNS 68
Query: 54 KDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAK 112
T+GTAFVVY+DIYDAK A+DHLSGFNVA RYL+VLYY +++K+ D K++ +L K
Sbjct: 69 ASTKGTAFVVYDDIYDAKNALDHLSGFNVAGRYLVVLYYNPARVNKRKDLDKQEADLKK 127
>gi|124806165|ref|XP_001350646.1| splicing factor 3b subunit, putative [Plasmodium falciparum 3D7]
gi|23496772|gb|AAN36326.1| splicing factor 3b subunit, putative [Plasmodium falciparum 3D7]
Length = 106
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 82/97 (84%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
N RLP EV+R+LYVRNLP+ IS++E+YDIFGKYG +RQIR G+++ T+GT+FVVY+DIYD
Sbjct: 5 NIRLPAEVSRILYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTKGTSFVVYDDIYD 64
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKK 106
AK A+DHLSGFNVA RYL+VLYY K KK + ++K
Sbjct: 65 AKNALDHLSGFNVAGRYLVVLYYDPVKAQKKKEIQEK 101
>gi|156103289|ref|XP_001617337.1| pre-mRNA branch site protein p14 [Plasmodium vivax Sal-1]
gi|148806211|gb|EDL47610.1| pre-mRNA branch site protein p14, putative [Plasmodium vivax]
Length = 110
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 81/95 (85%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLP EV+R+LYVRNLP+ IS++E+YDIFGKYG +RQIR G+++ T+GT+FVVY+DIYDAK
Sbjct: 7 RLPAEVSRILYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTKGTSFVVYDDIYDAK 66
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKK 106
A+DHLSGFNVA RYL+VLYY K +K + ++K
Sbjct: 67 NALDHLSGFNVAGRYLVVLYYDPVKAQRKKELQEK 101
>gi|70951856|ref|XP_745136.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525363|emb|CAH79120.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 109
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 78/91 (85%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
+ + N RLP EV+R+LYVRNLP+ I++EE+YDIFGKYG +RQIR G+++ TRGT+FVVY+
Sbjct: 1 MSRRNIRLPAEVSRILYVRNLPYKITAEELYDIFGKYGTVRQIRKGNAEGTRGTSFVVYD 60
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
DIYDAK A+DHLSGFNVA RYL++LYY K
Sbjct: 61 DIYDAKNALDHLSGFNVAGRYLVILYYDPVK 91
>gi|221061499|ref|XP_002262319.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193811469|emb|CAQ42197.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 110
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 81/95 (85%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
RLP EV+R+LYVRNLP+ IS++E+YDIFGKYG +RQIR G+++ T+GT+FVVY+DIYDAK
Sbjct: 7 RLPAEVSRILYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTKGTSFVVYDDIYDAK 66
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKK 106
A+DHLSGFNVA RYL+VLYY K +K + ++K
Sbjct: 67 NALDHLSGFNVAGRYLVVLYYDPVKAQRKKELQEK 101
>gi|401395744|ref|XP_003879671.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325114078|emb|CBZ49636.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 155
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 86/107 (80%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
A++ P+++R++YVRNLPF I+ +E+YDIFGKYGA+RQIR G++ TRG+AFVVYED++DA
Sbjct: 44 AKIAPDMSRIIYVRNLPFKITDDELYDIFGKYGAVRQIRKGNTDKTRGSAFVVYEDVFDA 103
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
+ AVD LSGFNVA RYLIVLYY K +++ + +EL ++++ Y
Sbjct: 104 RAAVDQLSGFNVAGRYLIVLYYNPQKAAQRQQMLAQKEELERIRQSY 150
>gi|453084773|gb|EMF12817.1| pre-mRNA branch site protein p14 [Mycosphaerella populorum SO2202]
Length = 115
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+++L PEVNR L+V+NL +N+S+EE++D+FGK+G IRQIR G + +T+GTAFVVYED+ D
Sbjct: 4 SSKLAPEVNRALFVKNLSYNVSTEELFDLFGKFGPIRQIRQGIAANTKGTAFVVYEDVMD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
AK A D L+GFN NRYL+VLY+Q KM+K + D ++ + L K+++++G+S
Sbjct: 64 AKGACDKLNGFNFQNRYLVVLYHQPEKMAKSQADLAERQENLEKLKQQHGIS 115
>gi|237841995|ref|XP_002370295.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211967959|gb|EEB03155.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|221482361|gb|EEE20716.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221502746|gb|EEE28460.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 156
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 84/106 (79%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
++ P+++R++YVRNLPF I+ +E+YDIFGKYGA+RQIR G++ TRG+AFVVYED+ DA+
Sbjct: 45 KIAPDMSRIIYVRNLPFKITDDELYDIFGKYGAVRQIRKGNTDKTRGSAFVVYEDVLDAR 104
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
AVD LSGFNVA RYLIVLYY K +++ + +EL ++++ Y
Sbjct: 105 AAVDQLSGFNVAGRYLIVLYYNPQKAAQRQQMLAQKEELERIRQSY 150
>gi|452840644|gb|EME42582.1| hypothetical protein DOTSEDRAFT_73428 [Dothistroma septosporum
NZE10]
Length = 114
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N+++EE++D+FGK+G+IRQIR G + +T+GTAFVVYED+ DAK
Sbjct: 5 KLAPEVNRALFVKNLSYNVTTEELFDLFGKFGSIRQIRQGIASNTKGTAFVVYEDVMDAK 64
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
+A D L+GFN NRYL+VLY+Q KM+K + D ++ + L K++ ++G+
Sbjct: 65 SACDKLNGFNFQNRYLVVLYHQPEKMAKSQADLAERQENLEKLKREHGI 113
>gi|400595349|gb|EJP63154.1| pre-mRNA branch site protein p14 [Beauveria bassiana ARSEF 2860]
Length = 169
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASATKGTAFVVYEDVIDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVST 121
K A D L+GFN NRYL+VLY+Q KM+K K D + + + LA++++++G ST
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPDKMAKSKEDLEARRESLARLKKQHGRST 117
>gi|46107306|ref|XP_380712.1| hypothetical protein FG00536.1 [Gibberella zeae PH-1]
Length = 173
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 63 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVTDA 122
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM+K K D + + + LA++++++G+
Sbjct: 123 KQACDKLNGFNFQNRYLVVLYHQPDKMAKSKEDLEARRESLAQLKQQHGI 172
>gi|342877370|gb|EGU78838.1| hypothetical protein FOXB_10660 [Fusarium oxysporum Fo5176]
Length = 177
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 67 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVADA 126
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM+K K D + + + LA++++++G+
Sbjct: 127 KQACDKLNGFNFQNRYLVVLYHQPDKMAKSKEDLEARRESLAQLKQQHGI 176
>gi|408399464|gb|EKJ78565.1| hypothetical protein FPSE_01231 [Fusarium pseudograminearum CS3096]
Length = 173
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 63 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVTDA 122
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM+K K D + + + LA++++++G+
Sbjct: 123 KQACDKLNGFNFQNRYLVVLYHQPDKMAKSKEDLEARRESLAQLKQQHGI 172
>gi|345562894|gb|EGX45902.1| hypothetical protein AOL_s00112g91 [Arthrobotrys oligospora ATCC
24927]
Length = 116
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
+ + +L PEVNR+L+V+NL + +SSEE++D+FGK+G IRQIR G + +T+GTAFVVYE
Sbjct: 1 MNRSQNKLAPEVNRILFVKNLSYQVSSEELFDLFGKFGPIRQIRQGIANNTKGTAFVVYE 60
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
++ DAKTA D L+GFN NRYL+VLY+Q KM++ + D + +EL K+++++G+
Sbjct: 61 EVGDAKTACDKLNGFNFQNRYLVVLYHQPEKMARSEKDLALRQEELEKLKKQHGI 115
>gi|398396208|ref|XP_003851562.1| hypothetical protein MYCGRDRAFT_73322 [Zymoseptoria tritici IPO323]
gi|339471442|gb|EGP86538.1| hypothetical protein MYCGRDRAFT_73322 [Zymoseptoria tritici IPO323]
Length = 115
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
++++ PEVNR L+V+NL +N+S+EE++D+FGK+G IRQIR G + +T+GTAFVVYED+ D
Sbjct: 4 SSKVAPEVNRALFVKNLSYNVSTEELFDLFGKFGPIRQIRQGIATNTKGTAFVVYEDVLD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
AK+A D L+GFN NRYL+VLY+Q KM+K + D ++ + L ++ ++G+S
Sbjct: 64 AKSACDKLNGFNFQNRYLVVLYHQIDKMAKSQQDMAQRTENLEALKRQHGIS 115
>gi|258574487|ref|XP_002541425.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
gi|237901691|gb|EEP76092.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
Length = 115
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N++++E++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 6 KLAPEANRILFVKNLSYNVTADELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+GFN NRYL+VLY+Q KM+K K D + + L K+++++G+
Sbjct: 66 QACDKLNGFNFQNRYLVVLYHQPEKMAKSKEDLAARQENLEKLKQQHGI 114
>gi|328860615|gb|EGG09720.1| hypothetical protein MELLADRAFT_95176 [Melampsora larici-populina
98AG31]
Length = 122
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 83/109 (76%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L +VNR+L+V+NL + E++YD+FGKYGAIRQIRIG+ TRGTAFVVYEDI DAK
Sbjct: 10 KLSGDVNRILFVKNLNYKTKGEDLYDLFGKYGAIRQIRIGNDAKTRGTAFVVYEDILDAK 69
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
A DHL+GF++ RYL+VLY+Q + + K D K++ ELA +++ + +S
Sbjct: 70 NAFDHLNGFHLQERYLVVLYHQFQRQAAKADLAKREAELAALKKAHNIS 118
>gi|389633809|ref|XP_003714557.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae 70-15]
gi|351646890|gb|EHA54750.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae 70-15]
gi|440466499|gb|ELQ35764.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae Y34]
gi|440482089|gb|ELQ62610.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae P131]
Length = 115
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASNTKGTAFVVYEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM++ K D + + + LA++++++G+
Sbjct: 65 KQACDKLNGFNFQNRYLVVLYHQPEKMARSKEDLEARKENLAQLKKQHGI 114
>gi|302922980|ref|XP_003053579.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734520|gb|EEU47866.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 116
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASNTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM++ K D + + + LA++++++G+
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPDKMARSKEDLEARRESLAQLKKQHGI 115
>gi|242765364|ref|XP_002340960.1| pre-mRNA branch site protein p14, putative [Talaromyces stipitatus
ATCC 10500]
gi|218724156|gb|EED23573.1| pre-mRNA branch site protein p14, putative [Talaromyces stipitatus
ATCC 10500]
Length = 113
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +T+GTAFVVYED+ DAK
Sbjct: 4 KLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIANNTKGTAFVVYEDVMDAK 63
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM++ + D ++ + L ++++++G+
Sbjct: 64 QACDKLNGFNFQNRYLVVLYHQPEKMARSREDLAERQENLERLKQQHGIE 113
>gi|209880317|ref|XP_002141598.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557204|gb|EEA07249.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 101
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 76/92 (82%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
R+ PEV+R+LY+R LP+ I+++E+YDIFGKYG I+QIR G+S TRGTAFVVY+DIYDA
Sbjct: 9 TRISPEVSRILYIRQLPYKITADELYDIFGKYGTIKQIRRGTSLSTRGTAFVVYDDIYDA 68
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFD 102
K A++HLSGF VA RY++VLY+ Q+K+ D
Sbjct: 69 KNALEHLSGFQVAGRYIVVLYFNQSKVKSPND 100
>gi|402086724|gb|EJT81622.1| pre-mRNA branch site protein p14 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 115
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASNTKGTAFVVYEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
KTA D L+G+N NRYL+VLY+Q KM + K D + + LA++++++G+
Sbjct: 65 KTACDKLNGYNFQNRYLVVLYHQPEKMGRSKEDLDARKENLAQLKKQHGI 114
>gi|452981365|gb|EME81125.1| hypothetical protein MYCFIDRAFT_56057 [Pseudocercospora fijiensis
CIRAD86]
Length = 115
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N+++EE++D+FGK+G IRQIR G + +T+GTAFVVYED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTTEELFDLFGKFGPIRQIRQGIAANTKGTAFVVYEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM+K + D ++ + L +++ ++G+
Sbjct: 65 KGACDKLNGFNFQNRYLVVLYHQPEKMAKSQQDLAERQENLERLKREHGI 114
>gi|336373742|gb|EGO02080.1| hypothetical protein SERLA73DRAFT_177811 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386560|gb|EGO27706.1| hypothetical protein SERLADRAFT_461603 [Serpula lacrymans var.
lacrymans S7.9]
Length = 122
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 93/120 (77%), Gaps = 3/120 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + A+LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIG+ + T+GTAF+V
Sbjct: 1 MALARPTAKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRIGNEQKTKGTAFIV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYY---QQTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ +Q + K D ++++ELA++++K+ +
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAATAKADLARREEELAQLKKKHNIG 120
>gi|119193232|ref|XP_001247222.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320040131|gb|EFW22065.1| pre-mRNA branch site protein p14 [Coccidioides posadasii str.
Silveira]
gi|392863538|gb|EAS35707.2| pre-mRNA branch site protein p14 [Coccidioides immitis RS]
Length = 115
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++++++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 6 KLAPEANRILFVKNLSYNVTADDLFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+GFN NRYL+VLY+Q KM+K K D + + L K+++++G+
Sbjct: 66 QACDKLNGFNFQNRYLVVLYHQPEKMAKSKEDLAARQENLEKLKQQHGI 114
>gi|346322501|gb|EGX92100.1| pre-mRNA branch site protein p14 [Cordyceps militaris CM01]
Length = 171
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+ +L PEVNR L+V+NL +N++ EE++ +FGK+G IRQ+R G + T+GTAFVVYED+ D
Sbjct: 5 SGKLAPEVNRALFVKNLSYNVTPEELFALFGKFGPIRQVRQGIAPGTKGTAFVVYEDVID 64
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
AK A D L+GFN NRYL+VLY+Q KM+K K D + + LA++++++G S
Sbjct: 65 AKQACDKLNGFNFQNRYLVVLYHQPDKMAKSKEDLEARRQSLARLKQQHGRS 116
>gi|317142939|ref|XP_001819205.2| pre-mRNA branch site p14-like protein [Aspergillus oryzae RIB40]
Length = 146
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 37 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAK 96
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+GFN NRYL+VLY+Q KM K K D ++ + L ++++++G+
Sbjct: 97 QACDKLNGFNFQNRYLVVLYHQPEKMLKSKEDLAERQENLERLKQQHGI 145
>gi|358398756|gb|EHK48107.1| hypothetical protein TRIATDRAFT_155183 [Trichoderma atroviride IMI
206040]
Length = 116
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM K K D + + LA++++++G+
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPDKMVKSKEDLDARRESLAQLKKQHGI 115
>gi|156045603|ref|XP_001589357.1| hypothetical protein SS1G_09992 [Sclerotinia sclerotiorum 1980]
gi|154694385|gb|EDN94123.1| hypothetical protein SS1G_09992 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 194
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 76/101 (75%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+GAIRQIR G + +T+GTAFVVYED+ D+
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGAIRQIRQGIATNTKGTAFVVYEDVTDS 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELA 111
KTA D L+GFN NRYL+VLY+Q KM K + D A
Sbjct: 65 KTACDKLNGFNFQNRYLVVLYHQPEKMEKMRANSNQSDSYA 105
>gi|322708822|gb|EFZ00399.1| pre-mRNA branch site protein p14 [Metarhizium anisopliae ARSEF 23]
Length = 116
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL ++++ EE++D+FGK+G IRQ+R G S T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYSVTPEELFDLFGKFGPIRQVRQGISTSTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM K K D + + + LA++++++G+
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPEKMMKSKEDLEARRESLAQLKKQHGI 115
>gi|295673214|ref|XP_002797153.1| pre-mRNA branch site protein p14 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282525|gb|EEH38091.1| pre-mRNA branch site protein p14 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292312|gb|EEH47732.1| pre-mRNA branch site protein p14 [Paracoccidioides brasiliensis
Pb18]
Length = 115
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+ +L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 STKLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIATNSKGTAFVVYEDVID 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM++ K D + + L ++++++G+
Sbjct: 64 AKQACDKLNGFNFQNRYLVVLYHQPEKMARSKEDLAARQENLERLKQQHGI 114
>gi|212528840|ref|XP_002144577.1| pre-mRNA branch site protein p14, putative [Talaromyces marneffei
ATCC 18224]
gi|210073975|gb|EEA28062.1| pre-mRNA branch site protein p14, putative [Talaromyces marneffei
ATCC 18224]
Length = 113
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +T+GTAFVVYED+ D+K
Sbjct: 4 KLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIANNTKGTAFVVYEDVMDSK 63
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM++ + D ++ + L ++++++G+
Sbjct: 64 QACDKLNGFNFQNRYLVVLYHQPEKMARSREDLAERQENLERLKQQHGIE 113
>gi|330932205|ref|XP_003303690.1| hypothetical protein PTT_16008 [Pyrenophora teres f. teres 0-1]
gi|311320146|gb|EFQ88215.1| hypothetical protein PTT_16008 [Pyrenophora teres f. teres 0-1]
Length = 149
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL FN++ E++D+FGK+G +RQIR G + +T+GTAFVVYED+ DA
Sbjct: 39 GKLAPEVNRALFVKNLSFNVTPAELFDLFGKFGPVRQIRQGIANNTKGTAFVVYEDVMDA 98
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKF-DQKKKDDELAKMQEKYGV 119
K+A D L+GFN NRYL+VLY+Q KM K D ++ + L K+++++G+
Sbjct: 99 KSACDKLNGFNFQNRYLVVLYHQPDKMLKAASDLAERQENLEKLKKQHGI 148
>gi|121715254|ref|XP_001275236.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|238501940|ref|XP_002382204.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|83767063|dbj|BAE57203.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|119403393|gb|EAW13810.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|220692441|gb|EED48788.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|391863731|gb|EIT73031.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 113
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 4 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAK 63
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM K K D ++ + L ++++++G+
Sbjct: 64 QACDKLNGFNFQNRYLVVLYHQPEKMLKSKEDLAERQENLERLKQQHGIE 113
>gi|358387229|gb|EHK24824.1| hypothetical protein TRIVIDRAFT_215683 [Trichoderma virens Gv29-8]
Length = 116
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIAGNTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM K K D + + LA++++++G+
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPDKMVKSKEDLDARRESLAQLKKQHGI 115
>gi|452002585|gb|EMD95043.1| hypothetical protein COCHEDRAFT_1090393 [Cochliobolus
heterostrophus C5]
Length = 115
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL FN++ EE++D+FGK+G +RQIR G + ++GTAFVVYED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSFNVTPEELFDLFGKFGPVRQIRQGIANHSKGTAFVVYEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKF-DQKKKDDELAKMQEKYGV 119
K+A D L+GFN NRYL+VLY+Q KM K D ++ + L K+++++G+
Sbjct: 65 KSACDKLNGFNFQNRYLVVLYHQPDKMLKAANDLAERQENLEKLKKQHGI 114
>gi|154281493|ref|XP_001541559.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411738|gb|EDN07126.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225563117|gb|EEH11396.1| pre-mRNA branch site protein p14 [Ajellomyces capsulatus G186AR]
gi|240275701|gb|EER39214.1| pre-mRNA branch site protein p14 [Ajellomyces capsulatus H143]
gi|325093073|gb|EGC46383.1| pre-mRNA branch site protein p14 [Ajellomyces capsulatus H88]
Length = 115
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+++L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 SSKLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIATNSKGTAFVVYEDVAD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM++ + D + + L ++++++G+
Sbjct: 64 AKQACDKLNGFNFQNRYLVVLYHQPEKMARSREDLAARQENLERLKQQHGI 114
>gi|440640405|gb|ELR10324.1| pre-mRNA branch site protein p14 [Geomyces destructans 20631-21]
Length = 114
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 83/110 (75%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVV+ED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVFEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
K A D L+GFN +RYL+VLY+Q KM K D + + + L +++ ++G+
Sbjct: 65 KQACDKLNGFNFQSRYLVVLYHQPEKMKSKEDLEARKENLEQLKRQHGIE 114
>gi|331212215|ref|XP_003307377.1| hypothetical protein PGTG_00327 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309297780|gb|EFP74371.1| hypothetical protein PGTG_00327 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 122
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 83/114 (72%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R +L +VNR+L+V+NL + E++YD+FGKYGAIRQIRIG+ TRGTAFVVYED
Sbjct: 5 RSHPVKLSGDVNRILFVKNLNYKTKGEDLYDLFGKYGAIRQIRIGTDPKTRGTAFVVYED 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
I DAK A DHL+GF++ RYL+VLY+Q + + K D K++ EL +++ + +S
Sbjct: 65 ILDAKNAFDHLNGFHLQERYLVVLYHQFQRQAAKADLAKREAELIALKKTHNIS 118
>gi|346978177|gb|EGY21629.1| pre-mRNA branch site protein p14 [Verticillium dahliae VdLs.17]
Length = 117
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKM--SKKFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM K D + + + LA++++++G+
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPEKMLNRTKEDLEARRESLAQLKKQHGI 116
>gi|67900938|ref|XP_680725.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|40742846|gb|EAA62036.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|259483762|tpe|CBF79417.1| TPA: pre-mRNA branch site protein p14, putative (AFU_orthologue;
AFUA_2G05960) [Aspergillus nidulans FGSC A4]
Length = 172
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 63 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAK 122
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+GFN NRYL+VLY+Q KM K K D ++ + L ++++++G+
Sbjct: 123 QACDKLNGFNFQNRYLVVLYHQPEKMLKSKEDLAERQENLERLKQQHGI 171
>gi|154309565|ref|XP_001554116.1| hypothetical protein BC1G_07253 [Botryotinia fuckeliana B05.10]
gi|347838315|emb|CCD52887.1| similar to pre-mRNA branch site protein p14 [Botryotinia
fuckeliana]
Length = 121
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 76/101 (75%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+GAIRQIR G + +T+GTAFVVYED+ D+
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGAIRQIRQGIATNTKGTAFVVYEDVTDS 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELA 111
KTA D L+GFN NRYL+VLY+Q KM K + D A
Sbjct: 65 KTACDKLNGFNFQNRYLVVLYHQPEKMEKMRANSNQSDSYA 105
>gi|327303062|ref|XP_003236223.1| pre-mRNA branch site protein p14 [Trichophyton rubrum CBS 118892]
gi|326461565|gb|EGD87018.1| pre-mRNA branch site protein p14 [Trichophyton rubrum CBS 118892]
Length = 115
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+A+L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 SAKLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIATNSKGTAFVVYEDVTD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM + K D + + L +++ ++G+
Sbjct: 64 AKQACDKLNGFNFQNRYLVVLYHQPEKMVRSKTDLAARQENLERLKLQHGI 114
>gi|7497730|pir||T32782 hypothetical protein C50D2.5 - Caenorhabditis elegans
Length = 200
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 81/109 (74%), Gaps = 15/109 (13%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
A+LPPEVNR+LY++NLP+ I++EE IG++ +TRGTAFVVYEDI+DA
Sbjct: 11 AKLPPEVNRILYIKNLPYKITTEE---------------IGNTAETRGTAFVVYEDIFDA 55
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
KTA +HLSG+NV+NRYL+VLYYQ TK K+ D +K +L ++E+YG+
Sbjct: 56 KTACEHLSGYNVSNRYLVVLYYQATKAWKRMDTEKARTKLEDIKERYGI 104
>gi|261195020|ref|XP_002623914.1| pre-mRNA branch site protein p14 [Ajellomyces dermatitidis
SLH14081]
gi|239587786|gb|EEQ70429.1| pre-mRNA branch site protein p14 [Ajellomyces dermatitidis
SLH14081]
gi|239610720|gb|EEQ87707.1| pre-mRNA branch site protein p14 [Ajellomyces dermatitidis ER-3]
Length = 115
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+ +L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 STKLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVVD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM++ + D + + L ++++++G+
Sbjct: 64 AKQACDKLNGFNFQNRYLVVLYHQPEKMARSREDLATRQENLERLKQQHGI 114
>gi|115400751|ref|XP_001215964.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119480377|ref|XP_001260217.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|114191630|gb|EAU33330.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119408371|gb|EAW18320.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|134057510|emb|CAK48864.1| unnamed protein product [Aspergillus niger]
gi|358367610|dbj|GAA84228.1| pre-mRNA branch site protein p14 [Aspergillus kawachii IFO 4308]
Length = 113
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 4 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAK 63
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM + K D ++ + L ++++++G+
Sbjct: 64 QACDKLNGFNFQNRYLVVLYHQPEKMLRSKEDLAERQENLERLKQQHGIE 113
>gi|326471305|gb|EGD95314.1| pre-mRNA branch site protein p14 [Trichophyton tonsurans CBS
112818]
gi|326479400|gb|EGE03410.1| pre-mRNA branch site protein p14 [Trichophyton equinum CBS 127.97]
Length = 115
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+A+L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 SAKLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIATNSKGTAFVVYEDVTD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM + K D + + L +++ ++G+
Sbjct: 64 AKQACDKLNGFNFQNRYLVVLYHQPEKMIRSKTDLAARQENLERLKLQHGI 114
>gi|317028095|ref|XP_001400564.2| pre-mRNA branch site p14-like protein [Aspergillus niger CBS
513.88]
Length = 122
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 13 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAK 72
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM + K D ++ + L ++++++G+
Sbjct: 73 QACDKLNGFNFQNRYLVVLYHQPEKMLRSKEDLAERQENLERLKQQHGIE 122
>gi|340923936|gb|EGS18839.1| hypothetical protein CTHT_0054490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 115
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
TA D L+G+N NRYL+VLY+Q KM++ K D + + L ++++++G+
Sbjct: 66 TACDKLNGYNFQNRYLVVLYHQPEKMNRSKEDLDARKENLERLKKQHGI 114
>gi|378733606|gb|EHY60065.1| hypothetical protein HMPREF1120_08037 [Exophiala dermatitidis
NIH/UT8656]
Length = 116
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 84/112 (75%), Gaps = 2/112 (1%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
++RL PE NR+L+V+NL +N+ S ++D+FGK+G IRQIR+G+S T+GTA+VVYED+ D
Sbjct: 4 SSRLAPEANRILFVKNLAYNVDSPALFDLFGKFGPIRQIRVGNSNTTKGTAYVVYEDVMD 63
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK--KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM K D + + L +M++++G+
Sbjct: 64 AKQACDKLNGFNFMNRYLVVLYHQPEKMKTEVKEDIAARQENLERMKKEHGI 115
>gi|358055650|dbj|GAA97995.1| hypothetical protein E5Q_04675 [Mixia osmundae IAM 14324]
Length = 480
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAV 74
P+VNR+L+V+NL F I E++Y++FGKYGAIRQIR+GS++ TRGTA+VV EDIYDAK A
Sbjct: 374 PDVNRILFVKNLSFKIRGEDLYELFGKYGAIRQIRLGSAQKTRGTAYVVMEDIYDAKAAY 433
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
++L+GF++ RYL+VLY+Q K + K D K++ ELA +++K+ ++
Sbjct: 434 ENLNGFHLQERYLVVLYHQPAKQAAK-DLAKREAELADVKKKHNIN 478
>gi|340522452|gb|EGR52685.1| predicted protein [Trichoderma reesei QM6a]
Length = 116
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL + ++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYTVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KM K K D + + LA++++++G+
Sbjct: 66 KQACDKLNGFNFQNRYLVVLYHQPDKMVKSKEDLDARRESLAQLKKQHGI 115
>gi|367019080|ref|XP_003658825.1| hypothetical protein MYCTH_105822 [Myceliophthora thermophila ATCC
42464]
gi|347006092|gb|AEO53580.1| hypothetical protein MYCTH_105822 [Myceliophthora thermophila ATCC
42464]
Length = 115
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVLDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+G+N NRYL+VLY+Q KM++ K D + + L ++++++G+
Sbjct: 66 QACDKLNGYNFQNRYLVVLYHQPDKMNRTKEDLDARKENLERLKQQHGI 114
>gi|255948164|ref|XP_002564849.1| Pc22g08360 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591866|emb|CAP98124.1| Pc22g08360 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 113
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + ++GTAFVVYED++DAK
Sbjct: 4 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANTSKGTAFVVYEDVHDAK 63
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM + K D ++ + L ++++++G+
Sbjct: 64 QACDKLNGFNFQNRYLVVLYHQPEKMVRTKEDITERQENLERLKQQHGIE 113
>gi|322699127|gb|EFY90891.1| pre-mRNA branch site protein p14 [Metarhizium acridum CQMa 102]
Length = 177
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+L PEVNR L+V+NL ++++ EE++D+FGK+G IRQ+R G S T+GTAFVVYED+ D
Sbjct: 5 GGKLAPEVNRALFVKNLSYSVTPEELFDLFGKFGPIRQVRQGISTSTKGTAFVVYEDVMD 64
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKY 117
AK A D L+GFN NRYL+VLY+Q KM K K D + + + LA++++++
Sbjct: 65 AKQACDKLNGFNFQNRYLVVLYHQPEKMMKSKEDLEARRESLAQLKKQH 113
>gi|350635238|gb|EHA23600.1| hypothetical protein ASPNIDRAFT_138217 [Aspergillus niger ATCC
1015]
Length = 112
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++E+++D+FGK+G IRQIR G + +++GTAFVVYED++DAK
Sbjct: 5 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAK 64
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYG 118
A D L+GFN NRYL+VLY+Q KM + K D ++ + L ++++++G
Sbjct: 65 QACDKLNGFNFQNRYLVVLYHQPEKMLRSKEDLAERQENLERLKQQHG 112
>gi|367052823|ref|XP_003656790.1| hypothetical protein THITE_2171338 [Thielavia terrestris NRRL 8126]
gi|347004055|gb|AEO70454.1| hypothetical protein THITE_2171338 [Thielavia terrestris NRRL 8126]
Length = 115
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+G+N NRYL+VLY+Q KM++ K D + + L ++++++G+
Sbjct: 66 QACDKLNGYNFQNRYLVVLYHQPDKMARTKEDLDARKENLERLKKQHGI 114
>gi|407916455|gb|EKG09823.1| hypothetical protein MPH_13030 [Macrophomina phaseolina MS6]
Length = 115
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N+S EE++D+FGK+G +RQIR G + T+GTAFVVYED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSYNVSPEELFDLFGKFGPVRQIRQGIANATKGTAFVVYEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
K A D L+GFN NRYL+VLY+Q KMS+ K D + +L + + GV
Sbjct: 65 KQACDKLNGFNFQNRYLVVLYHQPEKMSRSKDDSSNRASDLETGKSRNGV 114
>gi|164427672|ref|XP_964127.2| hypothetical protein NCU02837 [Neurospora crassa OR74A]
gi|157071838|gb|EAA34891.2| conserved hypothetical protein [Neurospora crassa OR74A]
gi|336463638|gb|EGO51878.1| hypothetical protein NEUTE1DRAFT_89652 [Neurospora tetrasperma FGSC
2508]
gi|350294965|gb|EGZ76029.1| hypothetical protein NEUTE2DRAFT_97428 [Neurospora tetrasperma FGSC
2509]
Length = 115
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+G+N NRYL+VLY+Q KM+K K D + + L +++ ++G+
Sbjct: 66 QACDKLNGYNFQNRYLVVLYHQPDKMNKTKEDLDARKENLERIKRQHGI 114
>gi|409049784|gb|EKM59261.1| hypothetical protein PHACADRAFT_205445 [Phanerochaete carnosa
HHB-10118-sp]
Length = 123
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + A+LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIR+GS + TRGTAFVV
Sbjct: 1 MALARPTAKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRVGSEQKTRGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ Q + K D ++++ELA++++K+ +
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELAQLKQKHDIK 120
Query: 121 TKD 123
+D
Sbjct: 121 DED 123
>gi|393246058|gb|EJD53567.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 139
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
++LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQ+RIG+ TRGTAFVVYED+ DA
Sbjct: 26 SKLPPGANRILFVKNLNYTITGEDLYDLFGRYGSIRQVRIGNDAKTRGTAFVVYEDVMDA 85
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVSTKD 123
K A+DHL+GF++ RY++VLY+ + K + +++++LAK ++++ + +D
Sbjct: 86 KNALDHLNGFHLQERYIVVLYHMPARQDGLKSEIARREEDLAKAKQQHNIRDED 139
>gi|171696206|ref|XP_001913027.1| hypothetical protein [Podospora anserina S mat+]
gi|170948345|emb|CAP60509.1| unnamed protein product [Podospora anserina S mat+]
Length = 191
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVSTKD 123
A D L+G+N NRYL+VLY+Q KM + K D + + L +++ ++G+ D
Sbjct: 66 QACDKLNGYNFQNRYLVVLYHQPDKMVRSKEDLDIRKENLERLKRQHGIDQLD 118
>gi|116181616|ref|XP_001220657.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185733|gb|EAQ93201.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 115
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+G+N NRYL+VLY+Q KM + K D + + L +++ ++G+
Sbjct: 66 QACDKLNGYNFQNRYLVVLYHQPDKMVRTKEDLDARKENLERLKHQHGI 114
>gi|380096344|emb|CCC06392.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 115
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR L+V+NL +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+G+N NRYL+VLY+Q K++K K D + + L +++ ++G+
Sbjct: 66 QACDKLNGYNFQNRYLVVLYHQPDKLNKTKEDLDARKENLERIKRQHGI 114
>gi|71030926|ref|XP_765105.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352061|gb|EAN32822.1| hypothetical protein, conserved [Theileria parva]
Length = 134
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 81/109 (74%), Gaps = 10/109 (9%)
Query: 16 EVNRVLYVR----------NLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
EV R + +R NLP+ I+SEE+YDIFGKYG++RQIR G+S T+GTAFVVY+
Sbjct: 19 EVQRAIQLRHGGSSKTSNLNLPYKITSEELYDIFGKYGSVRQIRKGNSATTKGTAFVVYD 78
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
DI+DAK A+DHLSGFNVA RYL+VLYY K +K+ D K++ +L K++
Sbjct: 79 DIFDAKNALDHLSGFNVAGRYLVVLYYNPAKANKRKDLDKQEADLRKIR 127
>gi|449549949|gb|EMD40914.1| hypothetical protein CERSUDRAFT_111500 [Ceriporiopsis subvermispora
B]
Length = 123
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L++ +LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIGS + +RGTAFVV
Sbjct: 1 MALQRPTNKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRIGSEQKSRGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ Q + K D ++++ELA++++K+ ++
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELAQLKQKHDIT 120
Query: 121 TKD 123
+D
Sbjct: 121 DED 123
>gi|296418870|ref|XP_002839048.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635042|emb|CAZ83239.1| unnamed protein product [Tuber melanosporum]
Length = 123
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 86/118 (72%), Gaps = 9/118 (7%)
Query: 11 ARLPPEVNRVLYVRNLP--------FNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFV 62
+L PEV R L+V+NL +N+SSEE++D+FGK+G IRQIR G + +T+GTAFV
Sbjct: 5 GKLAPEVQRALFVKNLRHERICPSLYNVSSEELFDLFGKFGPIRQIRQGIANNTKGTAFV 64
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
VYED+ DAKTA D L+GFN NRYL+VLY+Q KM + + D K+ + L K+++++G+
Sbjct: 65 VYEDVMDAKTACDKLNGFNFQNRYLVVLYHQPEKMVRSENDLAKRQESLEKLKKQHGI 122
>gi|300120687|emb|CBK20241.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 67/78 (85%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
L+ RNLP+ I++EE+YDIF KYG IRQIR+G +K+TRGTAFVVYEDIYDAK AVDHLSG
Sbjct: 29 CLFRRNLPYKITNEEIYDIFAKYGDIRQIRVGETKETRGTAFVVYEDIYDAKDAVDHLSG 88
Query: 80 FNVANRYLIVLYYQQTKM 97
FNV RYL+VLY+Q T+
Sbjct: 89 FNVGGRYLVVLYFQATRW 106
>gi|395324165|gb|EJF56611.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 123
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 92/123 (74%), Gaps = 3/123 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + +LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIG+ + T+GTAFVV
Sbjct: 1 MALARPTTKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRIGNEQKTKGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMS---KKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ +K K + ++++ELA+++ K+ +
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPSKQDAAAAKAELARREEELAELKRKHDIQ 120
Query: 121 TKD 123
+D
Sbjct: 121 DED 123
>gi|315050202|ref|XP_003174475.1| pre-mRNA branch site protein p14 [Arthroderma gypseum CBS 118893]
gi|311339790|gb|EFQ98992.1| pre-mRNA branch site protein p14 [Arthroderma gypseum CBS 118893]
Length = 116
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 86/112 (76%), Gaps = 2/112 (1%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+A+L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 SAKLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVTD 63
Query: 70 AKTAVDHLSGFNVANRYLI-VLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+ VLY+Q KM + K D + + L +++ ++G+
Sbjct: 64 AKQACDKLNGFNFQNRYLVAVLYHQPEKMVRSKTDLAARQENLERLKLQHGI 115
>gi|443927084|gb|ELU45615.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 130
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 94/130 (72%), Gaps = 7/130 (5%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MAT P ++LPP NR+L+V+NL + I+ +++YD+FG+YGAIRQIR+G+ T+GTA
Sbjct: 1 MATRPGVCMYSKLPPGANRILFVKNLNYTITGDDLYDLFGRYGAIRQIRLGNDSKTKGTA 60
Query: 61 FVVYEDIYD-----AKTAVDHLSGFNVANRYLIVLYYQQTKM--SKKFDQKKKDDELAKM 113
FVVYED+ D AK A++HL+GF++ RY++VLY+ TK + K D ++++ELA +
Sbjct: 61 FVVYEDVMDYIPTQAKNALEHLNGFHLQERYIVVLYHMPTKQEAAAKADLVRREEELAAL 120
Query: 114 QEKYGVSTKD 123
++K+ + ++
Sbjct: 121 KKKHNIGEEN 130
>gi|390601474|gb|EIN10868.1| pre-mRNA branch site protein p14 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 123
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 92/123 (74%), Gaps = 3/123 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + +LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIG+ + TRGTAFVV
Sbjct: 1 MALARPATKLPPGANRILFVKNLNYAITGEDLYDLFGRYGSIRQIRIGNEQKTRGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ Q + K D ++++ELA++++K+ +
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELAQLKQKHNIG 120
Query: 121 TKD 123
D
Sbjct: 121 DSD 123
>gi|392568043|gb|EIW61217.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 123
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + +LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIG+ + +RGTAFVV
Sbjct: 1 MALARPTTKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRIGNDQKSRGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ Q + K + ++++ELA++++K+ ++
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKAEIARREEELAQLKKKHDIT 120
Query: 121 TKD 123
+D
Sbjct: 121 DED 123
>gi|380473728|emb|CCF46147.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 105
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 70/89 (78%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++D+FGK+G IRQ+R G + T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASGTKGTAFVVYEDVMDA 65
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK 99
K A D L+GFN NRYLIVLY+Q KM K
Sbjct: 66 KQACDKLNGFNFQNRYLIVLYHQPEKMLK 94
>gi|396498936|ref|XP_003845350.1| hypothetical protein LEMA_P006580.1 [Leptosphaeria maculans JN3]
gi|312221931|emb|CBY01871.1| hypothetical protein LEMA_P006580.1 [Leptosphaeria maculans JN3]
Length = 155
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAV 74
P + L+V+NL FN++ EE++D+FGK+G +RQIR G + +T+GTAFVVYED+ DAK+A
Sbjct: 49 PPSPKALFVKNLSFNVTPEELFDLFGKFGPVRQIRQGIANNTKGTAFVVYEDVMDAKSAC 108
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKF-DQKKKDDELAKMQEKYGV 119
D L+GFN NRYL+VLY+Q KM K D ++ + L K++ ++G+
Sbjct: 109 DKLNGFNFQNRYLVVLYHQPDKMLKAANDLAERQENLEKLKRQHGI 154
>gi|409079658|gb|EKM80019.1| hypothetical protein AGABI1DRAFT_113250 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198578|gb|EKV48504.1| hypothetical protein AGABI2DRAFT_192107 [Agaricus bisporus var.
bisporus H97]
Length = 122
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 90/112 (80%), Gaps = 3/112 (2%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
++LPP NR+L+V+NL +NI+ E++YD+FG+YG+IRQIRIG+ + T+GTAFVV++D+ DA
Sbjct: 8 SKLPPGANRILFVKNLNYNITGEDLYDLFGRYGSIRQIRIGNEQKTKGTAFVVFDDVMDA 67
Query: 71 KTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGV 119
K A+DHL+GF++ RY++VLY+ Q + K D ++++ELA++++K+ +
Sbjct: 68 KNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELAQLKKKHNI 119
>gi|349803601|gb|AEQ17273.1| putative splicing factor subunit [Pipa carvalhoi]
Length = 76
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 64/72 (88%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
++ N RLPPEVNR+LY+RNLP+ I+ EEMYDIFGKYG IRQIR+G++ +TRGTA+VVYED
Sbjct: 5 KRANIRLPPEVNRILYIRNLPYKITGEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYED 64
Query: 67 IYDAKTAVDHLS 78
I+DAK A DHLS
Sbjct: 65 IFDAKNACDHLS 76
>gi|389746772|gb|EIM87951.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 123
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 91/116 (78%), Gaps = 3/116 (2%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
++LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIR+G+ + TRGTAFVV++D+ DA
Sbjct: 8 SKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRMGNEQKTRGTAFVVFDDVMDA 67
Query: 71 KTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
K A+DHL+GF++ RY++VLY+ Q + K + ++++ELA++++K+ + +D
Sbjct: 68 KNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKAELARREEELAQLKKKHDIKDED 123
>gi|320589234|gb|EFX01696.1| pre-mRNA branch site protein [Grosmannia clavigera kw1407]
Length = 178
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 73/90 (81%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR L+V+NL +N++ EE++++FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 5 GKLAPEVNRALFVKNLSYNVTPEELFELFGKFGPIRQVRQGIANNTKGTAFVVYEDVMDA 64
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKK 100
K A D L+G+N NRYL+VLY+Q KM+K+
Sbjct: 65 KQACDKLNGYNFQNRYLVVLYHQPEKMAKR 94
>gi|406867557|gb|EKD20595.1| pre-mRNA branch site protein p14 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 128
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 86/123 (69%), Gaps = 14/123 (11%)
Query: 11 ARLPPEVNRVLYVRNLP-------------FNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
+L PEVNR L+++NL +N++ EE++D+FGK+G IRQIR G + +T+
Sbjct: 5 GKLAPEVNRALFIKNLRSVEAPSPGICLTIYNVAVEELFDLFGKFGPIRQIRQGIANNTK 64
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEK 116
GTAFVVYED+ DAK A D L+GFN NRYL+VLY+Q KM++ K D + + + L ++++K
Sbjct: 65 GTAFVVYEDVMDAKQACDKLNGFNFQNRYLVVLYHQPDKMARSKEDMEARKENLEQLKKK 124
Query: 117 YGV 119
+G+
Sbjct: 125 HGI 127
>gi|403418853|emb|CCM05553.1| predicted protein [Fibroporia radiculosa]
Length = 123
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + ++LPP NR+L+V+NL + I+ +++YD+FG+YG+IRQIRIG+ + +RGTAFVV
Sbjct: 1 MALARPASKLPPGANRILFVKNLNYQITGDDLYDLFGRYGSIRQIRIGNEQKSRGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ Q + K D ++++ELA+++ K+ ++
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELAQLKRKHDIN 120
Query: 121 TKD 123
+D
Sbjct: 121 DED 123
>gi|388581778|gb|EIM22085.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 118
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 85/104 (81%), Gaps = 4/104 (3%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L +VNR+LY++NLP++I+ E++YD+FGKYGAIRQIR+G++K+TRGTA+VVYE + D+K
Sbjct: 6 KLGQDVNRILYIKNLPYSITGEDLYDLFGKYGAIRQIRLGNTKETRGTAYVVYEIVNDSK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMS----KKFDQKKKDDELA 111
A D+L+GF++ RY++V+Y+Q K + K+ + K+++ELA
Sbjct: 66 QAFDNLNGFHLNERYIVVMYHQPEKQAQIAMKQAELAKREEELA 109
>gi|242208894|ref|XP_002470296.1| predicted protein [Postia placenta Mad-698-R]
gi|220730603|gb|EED84457.1| predicted protein [Postia placenta Mad-698-R]
Length = 123
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + +LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIG+ + TRGTAFVV
Sbjct: 1 MALARPATKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRIGNEQKTRGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
++D+ DAK A+DHL+GF++ RY++VLY+ Q + K D ++++EL+++++++ ++
Sbjct: 61 FDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELSQLKKRHDIN 120
>gi|402226279|gb|EJU06339.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 123
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
+R N +LPP NR+L+V+NL + I+ E++YD+FG+YG IRQIR+G+ + TRGTAFVVY+
Sbjct: 5 IRPAN-KLPPGANRILFVKNLNYTITGEDLYDLFGRYGTIRQIRLGNEQKTRGTAFVVYD 63
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
D+ DAK A+DHL+GF++ RY++VLY+ T+
Sbjct: 64 DVMDAKNALDHLNGFHLQERYIVVLYHMPTR 94
>gi|169860805|ref|XP_001837037.1| pre-mRNA branch site protein p14 [Coprinopsis cinerea okayama7#130]
gi|116501759|gb|EAU84654.1| pre-mRNA branch site protein p14 [Coprinopsis cinerea okayama7#130]
Length = 122
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 91/120 (75%), Gaps = 3/120 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ +++ ++LPP NR+L+V+NL + I+ E++Y++FG+YG+IRQIRIG+ T+GTAFVV
Sbjct: 1 MSIQRPTSKLPPGANRILFVKNLNYTITGEDLYELFGRYGSIRQIRIGNEAKTKGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
Y+D+ DAK A+DHL+GF++ RY++VLY+ Q + K + ++++ELA +++K+ +
Sbjct: 61 YDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKAELARREEELAALKKKHDIG 120
>gi|429854655|gb|ELA29652.1| pre-mRNA branch site protein p14 [Colletotrichum gloeosporioides
Nara gc5]
Length = 109
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
R L+V+NL +N++ EE++D+FGK+G IRQ+R G + T+GTAFVVYED+ DAK A D L+
Sbjct: 7 RALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASGTKGTAFVVYEDVMDAKQACDKLN 66
Query: 79 GFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
GFN NRYLIVLY+Q KM K K D + + LA++++++G+
Sbjct: 67 GFNFQNRYLIVLYHQPEKMLKSKEDLEARRASLAQLKQQHGI 108
>gi|303312245|ref|XP_003066134.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105796|gb|EER23989.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 135
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 88/131 (67%), Gaps = 21/131 (16%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--------------------QIR 49
+ +L PE NR+L+V+NL +N+++++++D+FGK+G IR QIR
Sbjct: 4 STKLAPEANRILFVKNLSYNVTADDLFDLFGKFGPIRYAALHLPTALAHLKLTISGRQIR 63
Query: 50 IGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDD 108
G + +++GTAFVVYED++DAK A D L+GFN NRYL+VLY+Q KM+K K D + +
Sbjct: 64 QGIAANSKGTAFVVYEDVHDAKQACDKLNGFNFQNRYLVVLYHQPEKMAKSKEDLAARQE 123
Query: 109 ELAKMQEKYGV 119
L K+++++G+
Sbjct: 124 NLEKLKQQHGI 134
>gi|393216080|gb|EJD01571.1| pre-mRNA branch site protein p14 [Fomitiporia mediterranea MF3/22]
Length = 123
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+LP NR+L+V+NL +NI+ +++Y++FG+YG+IRQIR+G +T+GTAFVVY+D+ DAK
Sbjct: 9 KLPAGANRILFVKNLNYNITGDDLYELFGRYGSIRQIRLGVESNTKGTAFVVYDDVTDAK 68
Query: 72 TAVDHLSGFNVANRYLIVLYY---QQTKMSKKFDQKKKDDELAKMQEKYGVS 120
A++HL+GF++ RY++VLY+ +Q + K + ++++ELA+++ K+ +
Sbjct: 69 NALEHLNGFHLQERYIVVLYHMPSRQDAAAVKAEIARREEELAQLKAKHDIG 120
>gi|310793958|gb|EFQ29419.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 110
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R L+V+NL +N++ EE++D+FGK+G IRQ+R G + T+GTAFVVYED+ DAK A D L
Sbjct: 7 HRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASGTKGTAFVVYEDVMDAKQACDKL 66
Query: 78 SGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
+GFN NRYLIVLY+Q KM K K D + + LA++++++G+
Sbjct: 67 NGFNFQNRYLIVLYHQPEKMLKSKEDLEARRASLAQLKKQHGI 109
>gi|392592744|gb|EIW82070.1| pre-mRNA branch site protein p14 [Coniophora puteana RWD-64-598
SS2]
Length = 122
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 87/113 (76%), Gaps = 3/113 (2%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
++LPP NR+L+V+NL + I+ E++YD+FG+YG +RQIRIG+ T+GTAFVV+ED+ DA
Sbjct: 8 SKLPPGANRILFVKNLNYQITGEDLYDLFGRYGTVRQIRIGNEPKTKGTAFVVFEDVMDA 67
Query: 71 KTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
K A++HL+GF++ RY++VLY+ Q + K D ++++ELA++++K+ +
Sbjct: 68 KNALEHLNGFHLQERYIVVLYHMPAKQDAAAAKADLARREEELAQLKKKHDIG 120
>gi|302694161|ref|XP_003036759.1| hypothetical protein SCHCODRAFT_12888 [Schizophyllum commune
H4-8]
gi|300110456|gb|EFJ01857.1| hypothetical protein SCHCODRAFT_12888 [Schizophyllum commune
H4-8]
Length = 121
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 72/91 (79%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K +LPP NR+L+V+NL + I+ E++YD+FG+YG IRQIRIG+ + T+GTAFVV+ED+
Sbjct: 4 KPAPKLPPGANRILFVKNLNYQITGEDLYDLFGRYGRIRQIRIGNEQKTKGTAFVVFEDV 63
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTKMS 98
DAK A+DHL+GF++ RY++VLY+ K +
Sbjct: 64 MDAKNALDHLNGFHLQERYIVVLYHMPEKQN 94
>gi|189192028|ref|XP_001932353.1| hypothetical protein PTRG_02020 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973959|gb|EDU41458.1| hypothetical protein PTRG_02020 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 159
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 80/107 (74%), Gaps = 3/107 (2%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
PP + L+V+NL FN++ E++D+FGK+G +RQIR G + +T+GTAFVVYED+ DAK+A
Sbjct: 54 PP--SPALFVKNLSFNVTPAELFDLFGKFGPVRQIRQGIANNTKGTAFVVYEDVMDAKSA 111
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKF-DQKKKDDELAKMQEKYGV 119
D L+GFN NRYL+VLY+Q KM K D ++ + L K+++++G+
Sbjct: 112 CDKLNGFNFQNRYLVVLYHQPDKMLKAASDLAERQENLEKLKKQHGI 158
>gi|170090764|ref|XP_001876604.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648097|gb|EDR12340.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 122
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ L + +LPP NR+L+V+NL + I+ E++YD+FG+YG+IRQIRIG+ T+GTAFVV
Sbjct: 1 MALARPTTKLPPGANRILFVKNLNYQITGEDLYDLFGRYGSIRQIRIGNEAKTKGTAFVV 60
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYYQ---QTKMSKKFDQKKKDDELAKMQEKYGVS 120
Y+D+ DAK A+DHL+GF++ RY++VLY+ Q + K + K++ EL K++ + G+
Sbjct: 61 YDDVMDAKNALDHLNGFHLQERYIVVLYHMPAKQDAAAAKAELAKREAELEKLKRENGIG 120
>gi|389586349|dbj|GAB69078.1| pre-mRNA branch site protein p14, partial [Plasmodium cynomolgi
strain B]
Length = 91
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 69/82 (84%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVAN 84
NLP+ IS++E+YDIFGKYG +RQIR G+++ T+GT+FVVY+DIYDAK A+DHLSGFNVA
Sbjct: 1 NLPYKISADELYDIFGKYGTVRQIRKGNAEGTKGTSFVVYDDIYDAKNALDHLSGFNVAG 60
Query: 85 RYLIVLYYQQTKMSKKFDQKKK 106
RYL+VLYY K +K + ++K
Sbjct: 61 RYLVVLYYDPVKAQRKKELQEK 82
>gi|225680637|gb|EEH18921.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 109
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 81/109 (74%), Gaps = 7/109 (6%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR+L+V+NL +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ DAK
Sbjct: 6 KLAPEANRILFVKNLSYNVTAEELFDLFGKFGPIRQIRQGIATNSKGTAFVVYEDVIDAK 65
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
A D L+GFN NRYL+ KM++ K D + + L ++++++G+
Sbjct: 66 QACDKLNGFNFQNRYLV------EKMARSKEDLAARQENLERLKQQHGI 108
>gi|82793483|ref|XP_728058.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484216|gb|EAA19623.1| Drosophila melanogaster RE19804p-related [Plasmodium yoelii
yoelii]
Length = 123
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 64/70 (91%)
Query: 23 VRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNV 82
+RNLP+ I+++E+YDIFGKYG +RQIR G+S+ TRGT+FVVY+DIYDAK A+DHLSGFNV
Sbjct: 30 LRNLPYKITADELYDIFGKYGTVRQIRKGNSEGTRGTSFVVYDDIYDAKNALDHLSGFNV 89
Query: 83 ANRYLIVLYY 92
A RYL++LYY
Sbjct: 90 AGRYLVILYY 99
>gi|15226021|ref|NP_179093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|3650029|gb|AAC61284.1| hypothetical protein [Arabidopsis thaliana]
gi|330251250|gb|AEC06344.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 101
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 59/70 (84%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
K N RLPPEV R+LY+ NLPF+I+SE+ YD+FG+Y IRQ+RIG K T+GTAFVVYEDI
Sbjct: 9 KQNPRLPPEVTRLLYICNLPFSITSEDTYDLFGRYSTIRQVRIGCEKGTKGTAFVVYEDI 68
Query: 68 YDAKTAVDHL 77
YDAK AVDHL
Sbjct: 69 YDAKKAVDHL 78
>gi|451853017|gb|EMD66311.1| hypothetical protein COCSADRAFT_84515, partial [Cochliobolus
sativus ND90Pr]
Length = 127
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 78/110 (70%), Gaps = 9/110 (8%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR FN++ EE++D+FGK+G +RQIR G + ++GTAFVVYED+ DA
Sbjct: 25 GKLAPEVNR--------FNVTPEELFDLFGKFGPVRQIRQGIANHSKGTAFVVYEDVMDA 76
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKF-DQKKKDDELAKMQEKYGV 119
K+A D L+GFN NRYL+VLY+Q KM K D ++ + L K+++++G+
Sbjct: 77 KSACDKLNGFNFQNRYLVVLYHQPDKMLKAANDLAERQENLEKLKKQHGI 126
>gi|50546775|ref|XP_500857.1| YALI0B13860p [Yarrowia lipolytica]
gi|49646723|emb|CAG83108.1| YALI0B13860p [Yarrowia lipolytica CLIB122]
Length = 113
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N +L+V+NLP+ +S+E+Y++FG++GA+RQIR GS KDTRGTAFVVYEDI DA AV L
Sbjct: 10 NNILFVKNLPYESTSDELYELFGRFGAVRQIRAGSEKDTRGTAFVVYEDIDDATEAVKTL 69
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQ-KKKDDELAKMQEKYGV 119
SGFN NRYL+ L++ +M K + + + +L ++++++G+
Sbjct: 70 SGFNYKNRYLVALFHSLEQMDKTAENLEARRAKLEELKKEHGL 112
>gi|295442846|ref|NP_595835.2| Pre-mRNA branch site p14-like protein [Schizosaccharomyces pombe
972h-]
gi|254745590|emb|CAA18384.2| U2 snRNP-associated protein SF3B14 ortholog (predicted)
[Schizosaccharomyces pombe]
Length = 114
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 83/114 (72%), Gaps = 8/114 (7%)
Query: 13 LPP-----EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+PP EVN +L+++NL F I++EEMYD+FG+YG +RQIR+G++ TRGTAFVVYE++
Sbjct: 1 MPPSTVNQEVNSILFIKNLSFKITAEEMYDLFGRYGPVRQIRLGNTVQTRGTAFVVYENV 60
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYY--QQTKMSKKFDQKKKDDELAKMQEKYGV 119
DA+ A + LSG+N +RYL+V YY ++ K+ + D + L ++++KYGV
Sbjct: 61 QDARRACEKLSGYNFMDRYLVVHYYNPERAKVDGQ-DLAARYAALEQVKQKYGV 113
>gi|259016306|sp|O59670.2|PM14_SCHPO RecName: Full=Pre-mRNA branch site p14-like protein
Length = 115
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 83/114 (72%), Gaps = 8/114 (7%)
Query: 13 LPP-----EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDI 67
+PP EVN +L+++NL F I++EEMYD+FG+YG +RQIR+G++ TRGTAFVVYE++
Sbjct: 1 MPPSTVNQEVNSILFIKNLSFKITAEEMYDLFGRYGPVRQIRLGNTVQTRGTAFVVYENV 60
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYY--QQTKMSKKFDQKKKDDELAKMQEKYGV 119
DA+ A + LSG+N +RYL+V YY ++ K+ + D + L ++++KYGV
Sbjct: 61 QDARRACEKLSGYNFMDRYLVVHYYNPERAKVDGQ-DLAARYAALEQVKQKYGV 113
>gi|361131082|gb|EHL02804.1| putative Pre-mRNA branch site p14-like protein [Glarea lozoyensis
74030]
Length = 107
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%), Gaps = 9/111 (8%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR +N++ EE++D+FGK+G IRQIR G + +T+GT++VV+ED+ DA
Sbjct: 5 GKLAPEVNR--------YNVTPEELFDLFGKFGPIRQIRQGIANNTKGTSYVVFEDVMDA 56
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
K A D L+GFN NRYLIVLY+Q KM K K D + + D L ++++++G+
Sbjct: 57 KMACDKLNGFNFQNRYLIVLYHQPEKMVKSKEDLEARKDNLEQLKKQHGIE 107
>gi|71014744|ref|XP_758756.1| hypothetical protein UM02609.1 [Ustilago maydis 521]
gi|46098546|gb|EAK83779.1| hypothetical protein UM02609.1 [Ustilago maydis 521]
Length = 121
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 78/103 (75%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R+L+V+NL +N + ++Y +FG+YGAIRQIR+G + T+GTA+VVYE++ D K A+DHL
Sbjct: 14 SRILFVKNLNYNTTGADLYQVFGRYGAIRQIRLGDATGTKGTAYVVYEEMADVKRALDHL 73
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+GF++ RY++VLY+ +++ K D +++ ELA ++ + ++
Sbjct: 74 NGFHLNERYIVVLYHMPARLAAKADLARREAELADLKALHNIT 116
>gi|343429409|emb|CBQ72982.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 119
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 79/103 (76%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R+L+V+NL +N + ++Y +FG+YGAIRQIR+G + T+GTA+VVYE++ DAK A+D+L
Sbjct: 14 SRILFVKNLNYNTTGADLYQVFGRYGAIRQIRLGDATGTKGTAYVVYEEMADAKRALDNL 73
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+GF++ RY++VLY+ +++ K D K++ ELA ++ + ++
Sbjct: 74 NGFHLNERYIVVLYHMPARLAAKADLAKREQELADLKAFHNIA 116
>gi|425766195|gb|EKV04819.1| hypothetical protein PDIG_86200 [Penicillium digitatum PHI26]
gi|425779117|gb|EKV17206.1| hypothetical protein PDIP_32220 [Penicillium digitatum Pd1]
Length = 105
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 79/110 (71%), Gaps = 9/110 (8%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PE NR +N+++E+++D+FGK+G IRQIR G + ++GTAFVVYED++DAK
Sbjct: 4 KLAPEANR--------YNVTAEQLFDLFGKFGPIRQIRQGIANTSKGTAFVVYEDVHDAK 55
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGVS 120
A D L+GFN NRYL+VLY+Q KM + K D ++ + L ++++++G+
Sbjct: 56 QACDKLNGFNFQNRYLVVLYHQPEKMVRTKEDITERQENLERLKQQHGIE 105
>gi|353244298|emb|CCA75715.1| hypothetical protein PIIN_09705 [Piriformospora indica DSM 11827]
Length = 91
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA R G +LPP NR+L+V+NL ++I+ E++YD+FG+YG IRQIRIG+ T+GTA
Sbjct: 1 MAAAQARAG-PKLPPGANRILFVKNLSYSITGEDLYDLFGRYGGIRQIRIGNEAKTKGTA 59
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
FVV++D+ DAK A++HL+GF++ RY++V
Sbjct: 60 FVVFDDVMDAKNALEHLNGFHLQERYIVV 88
>gi|449299769|gb|EMC95782.1| hypothetical protein BAUCODRAFT_71560, partial [Baudoinia
compniacensis UAMH 10762]
Length = 97
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVAN 84
+LPF +S+ E++ +FG YG+IRQIR G + +T+GTAFVVY+D+ DAK A D L+GFN N
Sbjct: 1 SLPFTVSTNELFSLFGAYGSIRQIRQGIASNTKGTAFVVYDDVMDAKAACDKLNGFNFQN 60
Query: 85 RYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
RYL+VLY+Q KM+K + D ++ + L K++ ++G+
Sbjct: 61 RYLVVLYHQPEKMAKAQADLAERQENLEKLKREHGI 96
>gi|327348840|gb|EGE77697.1| pre-mRNA branch site protein p14 [Ajellomyces dermatitidis ATCC
18188]
Length = 107
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 79/111 (71%), Gaps = 9/111 (8%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+ +L PE N +N+++EE++D+FGK+G IRQIR G + +++GTAFVVYED+ D
Sbjct: 4 STKLAPEAN--------SYNVTAEELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVVD 55
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQKKKDDELAKMQEKYGV 119
AK A D L+GFN NRYL+VLY+Q KM++ + D + + L ++++++G+
Sbjct: 56 AKQACDKLNGFNFQNRYLVVLYHQPEKMARSREDLATRQENLERLKQQHGI 106
>gi|355718830|gb|AES06400.1| splicing factor 3B, 14 kDa subunit [Mustela putorius furo]
Length = 88
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAV 74
P+VN +LY+RNLP+ I +EEMYDI+GKYG I I +G++ TRGT + Y+D +DAK
Sbjct: 1 PKVNWILYIRNLPYKIIAEEMYDIYGKYGPILHIGVGNTPKTRGTPY--YKDFFDAKNVC 58
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKFDQK 104
DHLS FNV NRYL+ LYY S+K+ QK
Sbjct: 59 DHLSEFNVYNRYLVDLYYNAKGSSEKWTQK 88
>gi|68065099|ref|XP_674534.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493173|emb|CAI00068.1| conserved hypothetical protein [Plasmodium berghei]
Length = 78
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
+ + N RLP EV+R+LYVRNLP+ I+++E+YDIFGKYG +RQIR G+ + TRGT+F VY+
Sbjct: 1 MSRRNIRLPAEVSRILYVRNLPYKITADELYDIFGKYGTVRQIRKGNYEGTRGTSF-VYD 59
Query: 66 DIYDAKTAVDHLSGFNVA 83
DIYDA AVDH SGFN A
Sbjct: 60 DIYDATNAVDHPSGFNEA 77
>gi|388853424|emb|CCF52823.1| uncharacterized protein [Ustilago hordei]
Length = 119
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 77/103 (74%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R+L+V+NL +N + ++Y +F +YGAIRQIR+G T+GTA+VVYE++ DAK A DHL
Sbjct: 14 SRILFVKNLNYNTTGADLYQVFSRYGAIRQIRLGDGPKTKGTAYVVYEEMADAKRASDHL 73
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+GF++ RY+++L++ +++ K D +++ ELA+++ + ++
Sbjct: 74 NGFHLNERYIVLLFHMPARLAAKADLARREAELAELKALHDIT 116
>gi|402580549|gb|EJW74499.1| 14 kDa subunit splicing factor 3b [Wuchereria bancrofti]
Length = 67
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 57/62 (91%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R N +LPPEVNR+LYV+NLP+ I+SEEMYDIFGK+GA+RQIR+G++ +TRGTAFVVYED
Sbjct: 6 RGRNQKLPPEVNRILYVKNLPYKITSEEMYDIFGKFGAVRQIRVGNTAETRGTAFVVYED 65
Query: 67 IY 68
I+
Sbjct: 66 IF 67
>gi|213402091|ref|XP_002171818.1| U2 snRNP-associated protein Sf3b14-like protein
[Schizosaccharomyces japonicus yFS275]
gi|211999865|gb|EEB05525.1| U2 snRNP-associated protein Sf3b14-like protein
[Schizosaccharomyces japonicus yFS275]
Length = 113
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
+ PEV R+L+V+NL F ++ ++MY++FG++G IRQIR+G++ +T+GTA VVY+ + DAK
Sbjct: 5 IGPEVTRILFVKNLSFKVTRDDMYELFGRFGQIRQIRLGNAVNTKGTALVVYDTVADAKL 64
Query: 73 AVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE---KYGV 119
A D LSG+N +RYL+V Y+ K +K D + A ++E KYG+
Sbjct: 65 ACDKLSGYNFMDRYLVVHYWSPEK--QKADGQDLAARYAALEEAKRKYGI 112
>gi|430812527|emb|CCJ30064.1| unnamed protein product [Pneumocystis jirovecii]
Length = 115
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 9/102 (8%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA +P + +LP VLYV+NL F +S+EE++D+FGK+G IR G+ TRGTA
Sbjct: 1 MAHLPRQSKAPQLP-----VLYVKNLSFKVSTEELFDLFGKFGPIR----GNDNTTRGTA 51
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFD 102
+VVY D DAKTA + L+GFN ++RYL VLY+Q KMS K D
Sbjct: 52 YVVYIDYNDAKTACEKLNGFNFSDRYLTVLYHQPEKMSGKTD 93
>gi|291510288|gb|ADE10100.1| RRM [Tremella fuciformis]
Length = 119
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 78/111 (70%), Gaps = 6/111 (5%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKT 72
P R L+V+N +NI+ ++YD+FG+YGAIRQIR+G++ + T+GTA+VVYE DA+
Sbjct: 7 PIAARALFVKNFNYNITGNDLYDLFGRYGAIRQIRLGNNTELKTKGTAYVVYESPEDAQE 66
Query: 73 AVDHLSGFNVANRYLIVLYY----QQTKMSKKFDQKKKDDELAKMQEKYGV 119
A+ HL+GF++ RY++VLY+ QQ K + + ++ ELA+ +++ G+
Sbjct: 67 AMTHLNGFHLMERYIVVLYHHPDKQQASALAKAELRAREKELAEEKKRLGI 117
>gi|392578211|gb|EIW71339.1| hypothetical protein TREMEDRAFT_60269 [Tremella mesenterica DSM
1558]
Length = 120
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 78/111 (70%), Gaps = 6/111 (5%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKT 72
P +R L+++NL FN + ++Y++FGKYG IRQ+R+G++ D T+GTA+VV+E DA
Sbjct: 7 PIASRCLFIKNLDFNTTGSDIYEVFGKYGPIRQVRLGNNTDLKTKGTAYVVFESPDDAHE 66
Query: 73 AVDHLSGFNVANRYLIVLYY----QQTKMSKKFDQKKKDDELAKMQEKYGV 119
A+ HL+GF++ +RY++VLY+ QQ K + + ++ ELA+ +++ G+
Sbjct: 67 AITHLNGFHLQSRYIVVLYHHPSKQQASALAKAEMRARERELAEEKKRLGL 117
>gi|395510175|ref|XP_003759356.1| PREDICTED: pre-mRNA branch site protein p14-like, partial
[Sarcophilus harrisii]
Length = 75
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 58/71 (81%)
Query: 51 GSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
G++ +TRGTA+VVYEDI+DAK A DHLSGFNV NRYL+VLYY + +K D KKK+++L
Sbjct: 1 GNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQL 60
Query: 111 AKMQEKYGVST 121
++EKYG++T
Sbjct: 61 KLLKEKYGINT 71
>gi|342320514|gb|EGU12454.1| Pre-mRNA branch site protein p14 [Rhodotorula glutinis ATCC 204091]
Length = 148
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 67/98 (68%), Gaps = 12/98 (12%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
+ +P R+ P+VNR+L+V+N+ + KYG+IRQ+R+G+ +GTA+
Sbjct: 40 SPLPSMSQTVRMSPDVNRILFVKNMNY------------KYGSIRQVRLGTEGKAKGTAY 87
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK 99
VVYED+ DAKTA DHL+GF++ +RYL+VLY+Q K +K
Sbjct: 88 VVYEDVMDAKTAFDHLNGFHLMDRYLVVLYHQPAKQAK 125
>gi|321254942|ref|XP_003193253.1| hypothetical protein CGB_D0400W [Cryptococcus gattii WM276]
gi|317459723|gb|ADV21466.1| conserved hypothetical protein [Cryptococcus gattii WM276]
gi|405119470|gb|AFR94242.1| hypothetical protein CNAG_04977 [Cryptococcus neoformans var.
grubii H99]
Length = 120
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDH 76
R L+V+NL FNI+ ++YD+FGKYG IRQIR+G+ + T+GTA+VV+E DAK AV+
Sbjct: 11 RALFVKNLNFNITGADLYDLFGKYGPIRQIRLGTDANLKTKGTAYVVFESPDDAKEAVNQ 70
Query: 77 LSGFNVANRYLIVLYY----QQTKMSKKFDQKKKDDELAKMQEKYGV 119
L+GF++ RY++VLY+ QQ K + + +++ LA+ + + G+
Sbjct: 71 LNGFHLMERYIVVLYHHPSKQQASALAKAELRAREEALAEEKRRLGM 117
>gi|58261500|ref|XP_568160.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115437|ref|XP_773432.1| hypothetical protein CNBI0460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256058|gb|EAL18785.1| hypothetical protein CNBI0460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230242|gb|AAW46643.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 120
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDH 76
R L+V+NL FNI+ ++YD+FGKYG IRQIR+G+ + T+GTA+VV+E DAK AV+
Sbjct: 11 RALFVKNLNFNITGADLYDLFGKYGPIRQIRLGTDANLKTKGTAYVVFESPDDAKEAVNQ 70
Query: 77 LSGFNVANRYLIVLYY----QQTKMSKKFDQKKKDDELAKMQEKYGV 119
L+GF++ RY++VLY+ QQ K + + +++ LA+ + + G+
Sbjct: 71 LNGFHLMERYIVVLYHHPSKQQASALAKAELRAREEALAEEKRRLGM 117
>gi|164659123|ref|XP_001730686.1| hypothetical protein MGL_2140 [Malassezia globosa CBS 7966]
gi|159104583|gb|EDP43472.1| hypothetical protein MGL_2140 [Malassezia globosa CBS 7966]
Length = 83
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 59/72 (81%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R+L+V+NL +NI ++Y++FG+YGAIRQIR+G+S+ TRGTAFVVYE+ DAK A+ L
Sbjct: 12 SRILFVKNLNYNIHGADLYELFGRYGAIRQIRLGTSQQTRGTAFVVYEEANDAKNAIASL 71
Query: 78 SGFNVANRYLIV 89
+GF++ RY+I
Sbjct: 72 NGFHLMERYIIA 83
>gi|336274610|ref|XP_003352059.1| hypothetical protein SMAC_00607 [Sordaria macrospora k-hell]
Length = 125
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+L PEVNR +N++ EE++D+FGKYG IRQ+R G + +T+GTAFVVYED+ DAK
Sbjct: 6 KLGPEVNRHRLTCLDSYNVTPEELFDLFGKYGPIRQVRQGIASNTKGTAFVVYEDVMDAK 65
Query: 72 TAVDHLSGFNVANRYLIV 89
A D L+G+N NRYL+V
Sbjct: 66 QACDKLNGYNFQNRYLVV 83
>gi|302411260|ref|XP_003003463.1| pre-mRNA branch site protein p14 [Verticillium albo-atrum
VaMs.102]
gi|261357368|gb|EEY19796.1| pre-mRNA branch site protein p14 [Verticillium albo-atrum
VaMs.102]
Length = 133
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 8/78 (10%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
+L PEVNR +N++ EE++D+FGK+G IRQ+R G + +T+GTAFVVYED+ DA
Sbjct: 6 GKLAPEVNR--------YNVTPEELFDLFGKFGPIRQVRQGIANNTKGTAFVVYEDVMDA 57
Query: 71 KTAVDHLSGFNVANRYLI 88
K A D L+GFN NRYL+
Sbjct: 58 KQACDKLNGFNFQNRYLV 75
>gi|126644773|ref|XP_001388108.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117336|gb|EAZ51436.1| hypothetical protein cgd3_2310 [Cryptosporidium parvum Iowa II]
Length = 86
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 57/68 (83%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++Y+R LP++ISS ++YDIFG++G IRQIR G +DT+GTAFVVY++I DAK+A+ LSG
Sbjct: 17 IIYLRQLPYDISSTDLYDIFGRHGTIRQIRRGVGEDTKGTAFVVYDEIEDAKSALKQLSG 76
Query: 80 FNVANRYL 87
F V+ RY+
Sbjct: 77 FQVSGRYV 84
>gi|123490485|ref|XP_001325623.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908525|gb|EAY13400.1| hypothetical protein TVAG_424320 [Trichomonas vaginalis G3]
Length = 100
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 59/81 (72%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
L NR+L+VRNLPF I +++Y++F +YG+I QIR+G T TAFVV++++ DA+
Sbjct: 8 LAKNANRILFVRNLPFGIDGDKLYELFSRYGSIYQIRLGCIPSTSTTAFVVFDNVLDAQA 67
Query: 73 AVDHLSGFNVANRYLIVLYYQ 93
A D L+G+ + NRYLIV YY+
Sbjct: 68 AKDALNGYTIENRYLIVQYYR 88
>gi|443894507|dbj|GAC71855.1| D-Tyr-tRNA (Tyr) deacylase [Pseudozyma antarctica T-34]
Length = 953
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G AR + R+++V+NL +N + ++Y++FG+YGAIRQIRIG + T+GTA+VVY+++
Sbjct: 6 GGAR---QHTRIVFVKNLNYNTTGADLYNVFGRYGAIRQIRIGDAPKTKGTAYVVYQEMA 62
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
DAK A+D+L+GF++ +RYL+ Y
Sbjct: 63 DAKRALDNLNGFHLNDRYLVGKY 85
>gi|169625198|ref|XP_001806003.1| hypothetical protein SNOG_15866 [Phaeosphaeria nodorum SN15]
gi|111055584|gb|EAT76704.1| hypothetical protein SNOG_15866 [Phaeosphaeria nodorum SN15]
Length = 118
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 74/118 (62%), Gaps = 21/118 (17%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIR-------QIRIGS---------SKDTRGTAF 61
+R L+V+NL FN++ EE++D+FGK+G +R +R+ S +T+GTAF
Sbjct: 5 HRALFVKNLSFNVTPEELFDLFGKFGPVRCVHSITLAVRVFSLEPNPTGHRQSNTKGTAF 64
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
VVYED+ DAK+A D L+GFN NRYL+ + ++ D ++ + L K+++++G+
Sbjct: 65 VVYEDVMDAKSACDKLNGFNFQNRYLV-----DKMLKQQSDLAERQENLEKLKKQHGI 117
>gi|426334896|ref|XP_004028972.1| PREDICTED: pre-mRNA branch site protein p14-like [Gorilla gorilla
gorilla]
Length = 86
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 39/121 (32%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVW--------- 51
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+ H F +K D KKK+++L ++EKYG++
Sbjct: 52 ------------CLPHFQAF------------------QKMDTKKKEEQLKLLKEKYGIN 81
Query: 121 T 121
T
Sbjct: 82 T 82
>gi|401884221|gb|EJT48393.1| hypothetical protein A1Q1_02676 [Trichosporon asahii var. asahii
CBS 2479]
Length = 122
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 75/116 (64%), Gaps = 12/116 (10%)
Query: 15 PEVNRVLY----VRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIY 68
P R+L +RN FNIS ++YD+FGKYG IRQ+R+G+S + T+GTA+VV+E
Sbjct: 8 PVTARILLPSADLRN--FNISGSDLYDLFGKYGPIRQVRLGTSTELKTKGTAYVVFESPD 65
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY----QQTKMSKKFDQKKKDDELAKMQEKYGVS 120
DAK A++ L+GF++ RY++VLY+ QQ K + + ++ EL + + G++
Sbjct: 66 DAKEAINALNGFHLMERYIVVLYHQPVKQQASQLAKAEIRAREQELEMEKRRLGMT 121
>gi|406695945|gb|EKC99242.1| hypothetical protein A1Q2_06442 [Trichosporon asahii var. asahii
CBS 8904]
Length = 122
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 12/116 (10%)
Query: 15 PEVNRVLY----VRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIY 68
P R+L +RN FNIS ++Y +FGKYG IRQ+R+G+S + T+GTA+VV+E
Sbjct: 8 PVTARILLPSTDLRN--FNISGSDLYGLFGKYGPIRQVRLGTSTELKTKGTAYVVFESPD 65
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY----QQTKMSKKFDQKKKDDELAKMQEKYGVS 120
DAK A++ L+GF++ RY++VLY+ QQ K + + ++ EL + + G++
Sbjct: 66 DAKEAINALNGFHLMERYIVVLYHQPVKQQASQLAKAEIRAREQELEMEKRRLGMT 121
>gi|161899099|ref|XP_001712776.1| mRNA splicing factor PRP14 [Bigelowiella natans]
gi|75756269|gb|ABA27164.1| mRNA splicing factor PRP14 [Bigelowiella natans]
Length = 94
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
NR+LYVRNLP ++S EE+ +F ++G I QIRIG K+T GTAF+++++ YD +++
Sbjct: 16 NRILYVRNLPVDVSLEELVTLFERFGEIYQIRIGIQKETHGTAFIIFKNFYDKNFVSNNI 75
Query: 78 SGFNVANRYLIVLYYQQT 95
SG V N+Y+IVL + T
Sbjct: 76 SGLTVRNKYIIVLIFFVT 93
>gi|254565177|ref|XP_002489699.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029495|emb|CAY67418.1| Hypothetical protein PAS_chr1-1_0060 [Komagataella pastoris GS115]
gi|328350118|emb|CCA36518.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 114
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 64/97 (65%), Gaps = 7/97 (7%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NLP+ + +++Y++FGKYG I Q+R+G+ DTRG+ +V++++ A+T VD +G
Sbjct: 7 IVLVKNLPYTTTGDDLYEVFGKYGNIMQVRLGNQADTRGSGLIVFKNLKSAQTCVDKANG 66
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
+N RYL+VL+Y D K DE+ +++ K
Sbjct: 67 YNFNGRYLVVLHYM-------VDLSKIQDEMLEVRRK 96
>gi|380473973|emb|CCF46028.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 97
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 46 RQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK-KFDQK 104
RQ+R G + T+GTAFVVYED+ DAK A D L+GFN NRYLIVLY+Q KM K K D +
Sbjct: 22 RQVRQGIASGTKGTAFVVYEDVMDAKQACDKLNGFNFQNRYLIVLYHQPEKMLKSKEDLE 81
Query: 105 KKDDELAKMQEKYGV 119
+ LA++++++G+
Sbjct: 82 ARRASLAQLKKQHGI 96
>gi|395509427|ref|XP_003758999.1| PREDICTED: uncharacterized protein LOC100914952 [Sarcophilus
harrisii]
Length = 197
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI 50
MA ++ N RLPPEVNR+LY+RNLP+ I++EEMYDIFGKYG IRQIR+
Sbjct: 1 MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRV 50
>gi|401825378|ref|XP_003886784.1| hypothetical protein EHEL_020460 [Encephalitozoon hellem ATCC
50504]
gi|392997940|gb|AFM97803.1| hypothetical protein EHEL_020460 [Encephalitozoon hellem ATCC
50504]
Length = 93
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 57/76 (75%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
++L++RNLP +IS +++ ++F +YG I QIRIG K+T GTAFVVY+ + A+ A+ H+
Sbjct: 6 TQILFIRNLPGDISKDKIMELFEEYGTIIQIRIGVEKNTMGTAFVVYDGVESARRAIRHM 65
Query: 78 SGFNVANRYLIVLYYQ 93
+G+ + +RYL V Y+Q
Sbjct: 66 NGYYLGDRYLNVGYWQ 81
>gi|344300937|gb|EGW31249.1| hypothetical protein SPAPADRAFT_56134 [Spathaspora passalidarum
NRRL Y-27907]
Length = 109
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NLP+ +S+ MY+ FG++G I QIRI + + T+G+ F++Y ++ +A A + L+G
Sbjct: 7 IVLVKNLPYKVSTSSMYEFFGQFGNINQIRISNEESTQGSCFIIYSNLANAIRAANELNG 66
Query: 80 FNVANRYLIV-LYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
N RYL+ LY + K + + ++L++++++Y +
Sbjct: 67 VNFQGRYLVTSLYPVDKSLINKEEMILRKEQLSQLKQQYSI 107
>gi|296813171|ref|XP_002846923.1| pre-mRNA branch site protein p14 [Arthroderma otae CBS 113480]
gi|238842179|gb|EEQ31841.1| pre-mRNA branch site protein p14 [Arthroderma otae CBS 113480]
Length = 117
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 41/132 (31%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
+A+L PE NR+L+V+NL QIR G + +++GTAFVVYED+ D
Sbjct: 4 SAKLAPEANRILFVKNLS-------------------QIRQGIATNSKGTAFVVYEDVSD 44
Query: 70 AKTAVDHLSGFNVANRYLI---------------------VLYYQQTKMSK-KFDQKKKD 107
AK A D L+GFN NRYL+ VLY+Q KM + K D +
Sbjct: 45 AKQACDKLNGFNFQNRYLVGWFSFYHAFIHVYIRLIVLAAVLYHQPEKMIRSKTDLAARQ 104
Query: 108 DELAKMQEKYGV 119
+ L +++ ++G+
Sbjct: 105 ENLERLKMQHGI 116
>gi|68482771|ref|XP_714695.1| hypothetical protein CaO19.6989 [Candida albicans SC5314]
gi|46436283|gb|EAK95648.1| hypothetical protein CaO19.6989 [Candida albicans SC5314]
gi|238880952|gb|EEQ44590.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 107
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NLP+N S+ +Y+ FGKYG I QIRI SS+ GT F++Y +I +A+ A L+G
Sbjct: 8 IVSVKNLPYNTSNSSLYEFFGKYGYINQIRINSSQP--GTCFIIYHNIKNAQRAAQDLNG 65
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
N RYL+ YQ K K ++E+A QE+
Sbjct: 66 VNFNGRYLVTSMYQVDK------SKINEEEMALRQEQ 96
>gi|294868953|ref|XP_002765738.1| Pre-mRNA branch site protein p14, putative [Perkinsus marinus
ATCC 50983]
gi|239865877|gb|EEQ98455.1| Pre-mRNA branch site protein p14, putative [Perkinsus marinus
ATCC 50983]
Length = 53
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
+G RLPPEVNR+LYVRNLP+ I +E+YD+FGK+G+IRQIR G++ T+
Sbjct: 4 RGRVRLPPEVNRILYVRNLPYKIKPDELYDVFGKFGSIRQIRKGNAPGTK 53
>gi|328874654|gb|EGG23019.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 119
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
GTAFVVY+DIYDAKTA DHLSG+N+ RYL+VLY+Q K +KK D KK E+ M++K+
Sbjct: 2 GTAFVVYDDIYDAKTACDHLSGYNLGGRYLVVLYHQPQKQAKKLDLLKKKQEMELMKQKF 61
Query: 118 GVSTK 122
G+ ++
Sbjct: 62 GIESR 66
>gi|255725808|ref|XP_002547830.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133754|gb|EER33309.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 109
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
+++V+N PF S+ E+++ FGKYG I QIR SS+ GT F++Y+++ +A+ A L+G
Sbjct: 10 IVHVKNYPFGTSNLELFEFFGKYGNIHQIRTNSSQP--GTCFIIYKNLINAQRAAQELNG 67
Query: 80 FNVANRYLIVLYYQ--QTKMSKKFDQKKKDDELAKMQEKYGV 119
N RY+I YQ ++K++++ + + + ++L ++++KY +
Sbjct: 68 VNFNGRYIITSMYQIDKSKINQQ-EMELRQEQLNELKQKYSI 108
>gi|440797693|gb|ELR18774.1| hypothetical protein ACA1_041000, partial [Acanthamoeba
castellanii str. Neff]
Length = 57
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 40/44 (90%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI 50
++ NARLPPEV R+++V+NLPF I+ +EMYDIFGK+GAIRQIR+
Sbjct: 14 KRANARLPPEVGRIVFVKNLPFKITPDEMYDIFGKFGAIRQIRL 57
>gi|303388345|ref|XP_003072407.1| hypothetical protein Eint_020470 [Encephalitozoon intestinalis
ATCC 50506]
gi|303301547|gb|ADM11047.1| hypothetical protein Eint_020470 [Encephalitozoon intestinalis
ATCC 50506]
Length = 94
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 54/76 (71%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
++L+VRNLP +IS +++ ++FG YG + QIRIG K T G+AFVVY+ + A+ A+ +
Sbjct: 6 TQILFVRNLPKDISKDKIIELFGDYGRVIQIRIGVEKSTAGSAFVVYDRVSGARKAIKRM 65
Query: 78 SGFNVANRYLIVLYYQ 93
+G+ + N YL V Y+Q
Sbjct: 66 NGYYLDNMYLNVGYWQ 81
>gi|241953467|ref|XP_002419455.1| pre-mRNA branch site protein, putative [Candida dubliniensis CD36]
gi|223642795|emb|CAX43049.1| pre-mRNA branch site protein, putative [Candida dubliniensis CD36]
Length = 107
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NLP+N S+ +Y+ FGKYG I QIRI S+ GT F++Y +I +A+ A L+G
Sbjct: 8 IVSVKNLPYNTSNSSLYEFFGKYGYINQIRINPSQP--GTCFIIYNNIVNAQRAAQELNG 65
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
N RYL+ T M + K ++E+A QE+
Sbjct: 66 VNFNGRYLV------TSMHQVDKSKINEEEMALRQEQ 96
>gi|50419345|ref|XP_458197.1| DEHA2C11990p [Debaryomyces hansenii CBS767]
gi|49653863|emb|CAG86273.1| DEHA2C11990p [Debaryomyces hansenii CBS767]
Length = 109
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NLP+++S++ +Y++ G +G I QIRI + +GT F+VY ++ +A A L+G
Sbjct: 9 IVLVKNLPYDVSTKSLYELAGNFGNIHQIRIPVDEQNKGTCFIVYNNLSNAIRASKSLNG 68
Query: 80 FNVANRYLIVLYYQ--QTKMSKKFDQKKKDDELAKMQEKYGV 119
N RYL+ ++Y ++K+S++ D K + ++L K++ ++ +
Sbjct: 69 INFQGRYLVSMHYSVDKSKLSEE-DFKYRKEQLEKLKLEHSI 109
>gi|19073974|ref|NP_584580.1| similarity to HYPOTHETICAL PROTEIN CGB0_HUMAN [Encephalitozoon
cuniculi GB-M1]
gi|19068616|emb|CAD25084.1| similarity to HYPOTHETICAL PROTEIN CGB0_HUMAN [Encephalitozoon
cuniculi GB-M1]
gi|449329367|gb|AGE95640.1| hypothetical protein ECU02_0530 [Encephalitozoon cuniculi]
Length = 93
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
++L+VRNLP ++S +++ ++FG+YG I QIRIG K+T G+AFVVY + A+ A+ +
Sbjct: 6 TQILFVRNLPKDVSKDKVVELFGEYGTIVQIRIGVEKNTAGSAFVVYSRVEGARKAMRRM 65
Query: 78 SGFNVANRYLIVLYYQ 93
+G+ + YL V Y+Q
Sbjct: 66 NGYYLDGMYLNVGYWQ 81
>gi|396080900|gb|AFN82520.1| hypothetical protein EROM_020450 [Encephalitozoon romaleae
SJ-2008]
Length = 93
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 55/75 (73%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
++L+VRNLP ++S +++ ++F +YG I QIR+G K+T G AFV Y+ + A+ AV H++
Sbjct: 7 QILFVRNLPKDVSKDKIIELFEEYGTIIQIRVGVEKNTAGNAFVGYDRVESARKAVRHMN 66
Query: 79 GFNVANRYLIVLYYQ 93
G+ + ++YL + Y+Q
Sbjct: 67 GYYLGDKYLNIGYWQ 81
>gi|146416495|ref|XP_001484217.1| hypothetical protein PGUG_03598 [Meyerozyma guilliermondii ATCC
6260]
Length = 110
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 70/106 (66%), Gaps = 8/106 (7%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDT-RGTAFVVYEDIYDAKTAVDH 76
++ V+NLP++ S++ +Y++FGK+G + QIRI G S+D +GT V++ ++ A+ AV
Sbjct: 6 IVLVKNLPYSSSTDSLYELFGKFGNVHQIRISDGLSEDAPKGTCIVIFTNLVSAQKAVQG 65
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKK---KDDELAKMQEKYGV 119
+G N RYL+VL Y +S K D+++ + D L K+++++G+
Sbjct: 66 ANGINFQGRYLVVLMY-AVDIS-KLDRQQYAIRADRLEKLKQEHGI 109
>gi|190347258|gb|EDK39500.2| hypothetical protein PGUG_03598 [Meyerozyma guilliermondii ATCC
6260]
Length = 110
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 70/106 (66%), Gaps = 8/106 (7%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDT-RGTAFVVYEDIYDAKTAVDH 76
++ V+NLP++ S++ +Y++FGK+G + QIRI GSS+D +GT V++ ++ A+ AV
Sbjct: 6 IVLVKNLPYSSSTDSLYELFGKFGNVHQIRISDGSSEDAPKGTCIVIFTNLVSAQKAVQG 65
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKK---KDDELAKMQEKYGV 119
+G N RYL+V Y +S K D+++ + D L K+++++G+
Sbjct: 66 ANGINFQGRYLVVSMY-AVDIS-KLDRQQYAIRADRLEKLKQEHGI 109
>gi|146104030|ref|XP_001469711.1| putative pre-mRNA branch site protein p14 [Leishmania infantum
JPCM5]
gi|398024546|ref|XP_003865434.1| pre-mRNA branch site protein p14, putative [Leishmania donovani]
gi|134074081|emb|CAM72823.1| putative pre-mRNA branch site protein p14 [Leishmania infantum
JPCM5]
gi|322503671|emb|CBZ38757.1| pre-mRNA branch site protein p14, putative [Leishmania donovani]
Length = 182
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 11 ARLPPEVNRVLYVRNLPF-NISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
A +P E R+L V +P +SE +Y +FG YG I+QIRIGSS T+G A VVYE
Sbjct: 63 AAMPDE--RILLVTGIPSKQCTSEYLYSLFGAYGGIQQIRIGSSSITKGCAIVVYEQCEA 120
Query: 70 AKTAVDHLSGFNVA-NRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
A AV L+ + ++ +R L V Y++ + K +++K+ E MQ +Y
Sbjct: 121 ANNAVGALNEYALSKDRVLRVSVYEEERDKKALERRKRKRE---MQAEY 166
>gi|157877102|ref|XP_001686883.1| putative pre-mRNA branch site protein p14 [Leishmania major strain
Friedlin]
gi|68129958|emb|CAJ09266.1| putative pre-mRNA branch site protein p14 [Leishmania major strain
Friedlin]
Length = 183
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 11 ARLPPEVNRVLYVRNLPF-NISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
A +P E R+L V +P +SE +Y +FG YG I+QIRIGSS T+G A VVYE
Sbjct: 64 AAMPDE--RILLVTGIPSKQCTSEYLYSLFGAYGGIQQIRIGSSSITKGCAIVVYEQCEA 121
Query: 70 AKTAVDHLSGFNVA-NRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
A AV L+ + ++ +R L V Y++ + K +++K+ E MQ +Y
Sbjct: 122 ANNAVGALNEYALSKDRVLRVSVYEEERDKKALERRKRKRE---MQAEY 167
>gi|448106862|ref|XP_004200848.1| Piso0_003458 [Millerozyma farinosa CBS 7064]
gi|448109898|ref|XP_004201479.1| Piso0_003458 [Millerozyma farinosa CBS 7064]
gi|359382270|emb|CCE81107.1| Piso0_003458 [Millerozyma farinosa CBS 7064]
gi|359383035|emb|CCE80342.1| Piso0_003458 [Millerozyma farinosa CBS 7064]
Length = 108
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
+++V+NLPF+ S++ ++++F ++G I QIRI + +G+ FVVY ++ DA A L+G
Sbjct: 7 IVFVKNLPFDSSTDSLFELFSQHGEIYQIRIAEDETCKGSCFVVYMNLKDALQASKLLNG 66
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
N RYL+ Y FD+ K EL ++++ S K +
Sbjct: 67 INFNGRYLVASMY-------AFDKSKIRGELLTLRKEQLESLKSQ 104
>gi|260940867|ref|XP_002615273.1| hypothetical protein CLUG_04155 [Clavispora lusitaniae ATCC
42720]
gi|238850563|gb|EEQ40027.1| hypothetical protein CLUG_04155 [Clavispora lusitaniae ATCC
42720]
Length = 96
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NLP+N S+ ++DIF K+G + Q+RI +GT +VVY ++ +A A L+G
Sbjct: 6 IVLVKNLPYNASTSSLFDIFSKFGPVHQLRISDGSVPQGTCYVVYTNMENAHRAAKELNG 65
Query: 80 FNVANRYLIVLYYQ 93
N +RYL+ +Q
Sbjct: 66 VNFQSRYLVAHMFQ 79
>gi|401420334|ref|XP_003874656.1| putative pre-mRNA branch site protein p14 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490892|emb|CBZ26156.1| putative pre-mRNA branch site protein p14 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 118
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 13 LPPEVNRVLYVRNLPF-NISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+P E R+L V +P +SE +Y +FG YG I+QIRIGSS T+G A VVYE A
Sbjct: 1 MPDE--RILLVTGIPSKQCTSEYLYSLFGAYGGIQQIRIGSSSITKGCAIVVYEQCEAAN 58
Query: 72 TAVDHLSGFNVA-NRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
AV L+ + ++ +R L V Y++ + K +++K+ E MQ +Y
Sbjct: 59 NAVGALNEYALSKDRVLRVSVYEEERDKKALERRKRKRE---MQAEY 102
>gi|154346016|ref|XP_001568945.1| putative pre-mRNA branch site protein p14 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066287|emb|CAM44078.1| putative pre-mRNA branch site protein p14 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 160
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 11 ARLPPEVNRVLYVRNLPF-NISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
A +P E R+L V +P +SE +Y +FG YG I+QIRIGSS T+G A VVYE
Sbjct: 41 AAMPDE--RILLVTGIPSKQCTSEYLYSLFGAYGGIQQIRIGSSFITKGCAIVVYEQCEA 98
Query: 70 AKTAVDHLSGFNVA-NRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
A AV L+ + ++ +R L V Y++ + K +++K+ E MQ +Y
Sbjct: 99 ANNAVGALNEYALSKDRILRVSVYEEERDKKALERRKRKRE---MQAEY 144
>gi|149245904|ref|XP_001527422.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449816|gb|EDK44072.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 105
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+NL F S++ +YD F +YG I Q+R + + +G F++Y++I A+ A +G
Sbjct: 5 IVLVKNLSFTASNKSIYDFFSQYGHIYQVRTSTKEQHQGQVFIIYDNIQSAERAAKEANG 64
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKK---KDDELAKMQEKYGV 119
N RYL+ YQ K K DQK K +++ ++++ Y +
Sbjct: 65 VNFQGRYLVTSIYQVDK--SKIDQKVMTLKQEQIEELKQLYDI 105
>gi|402584695|gb|EJW78636.1| hypothetical protein WUBG_10457 [Wuchereria bancrofti]
Length = 76
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+DAK A +HLSGFNV+NRYL+VLYYQ TK ++ D K + L +++E+Y +
Sbjct: 4 FFDAKNACEHLSGFNVSNRYLVVLYYQATKAYRRMDTDKAKERLEEIKERYNLG 57
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISS----EEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N+ +YV NL IS E +Y +F KYG I +I S RG AF+V++DI
Sbjct: 10 IPP--NQTIYVNNLYEKISKKKLREHLYSLFSKYGQILEIEASKSLKMRGQAFIVFKDIT 67
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
A A+ ++GFN +R + + Y
Sbjct: 68 SASNALREMNGFNFLDRPMKIQY 90
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
+ IP LPP N+ L+V NLP + +F ++ +++ + SK +G A
Sbjct: 143 VGNIPSNLQPRDLPP--NKTLFVENLPDKCDPMMLEMLFSQFPGYKEVHMVESK--KGIA 198
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
FV ++D + A+ L F V +V+ +
Sbjct: 199 FVEFQDESKSGLAMQSLQHFKVTQEKPMVISF 230
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHL 77
L ++N+PF +S +E+ +F YG I+ +R+ D TRG AFV + +AK A L
Sbjct: 572 TLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRKADRHTRGFAFVEFRSTAEAKEAKQAL 631
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQK--KKDDELAKMQEKYGVSTKDK 124
S ++ R+L++ Y Q + + D K + D EL ++K+ + T+D+
Sbjct: 632 SQTHLLGRHLVIEYGQADQGASLRDDKRPRPDFELPNRRKKFKMGTEDE 680
>gi|440801545|gb|ELR22563.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 520
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
P + +R L+VRN+ +N S + D+F KYG I+ R+ + D RG AF+ Y DI DA+ A
Sbjct: 117 PEQQSRTLFVRNVSYNTSERTLMDLFKKYGEIK--RVFNLIDKRGMAFITYYDIRDAQEA 174
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
L G++ R L + Y +DDE E+ VST
Sbjct: 175 KRDLQGYDFEGRPLDIHY-----------SIPRDDEDQAKNEENNVST 211
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVY 64
RK P E N V+ V+NLPF + +E+ D+F Y ++ +R+ S RG FV +
Sbjct: 669 RKKKEGGPTEENDVIIVKNLPFQATKKELSDLFKHYANVKTVRLPKSAGNTHRGFGFVEF 728
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
DAKTA+++L ++ R L++ Y + TK
Sbjct: 729 MSKSDAKTAMENLKNVHLYGRRLVLQYVENTK 760
>gi|46116888|ref|XP_384462.1| hypothetical protein FG04286.1 [Gibberella zeae PH-1]
Length = 242
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+NLP + E + +FG++ +R++R+ ++ RG AF+ YE A T
Sbjct: 165 LPP--NKILFVQNLPEDYDIEALTSVFGRFEGLREVRLVPTR--RGIAFIEYETEQGAIT 220
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G N+ ++ + V Y +Q
Sbjct: 221 AKENTAGLNLGDKPIKVTYQRQ 242
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV+NL + E + D IF ++G + I + +G AF+VY++ A+ A++
Sbjct: 9 TVYVQNLEERVKLETLVDALRTIFSEFGNVVDIVAKKNLRAKGQAFIVYDNAESAQEAIE 68
Query: 76 HLSGFNV 82
++GF++
Sbjct: 69 EINGFDL 75
>gi|340057337|emb|CCC51682.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 117
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 13 LPPEVNRVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+P E R+L V +P + EE+Y +FG YGAI+Q+RIGS T+G A VVYE +
Sbjct: 1 MPDE--RILLVTGIPAKLCRGEELYRVFGSYGAIQQLRIGSDACTKGCAIVVYELCEASA 58
Query: 72 TAVDHLSGFNV-ANRYLIVLYYQQTK 96
A++ L+ F + +RYL V Y +T+
Sbjct: 59 AALEALNDFKIDKDRYLRVSVYDETR 84
>gi|395324428|gb|EJF56868.1| hypothetical protein DICSQDRAFT_157662 [Dichomitus squalens
LYAD-421 SS1]
Length = 141
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 26 LPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANR 85
L F+ S + G+YG+IRQIRIG+ + T+GT FVV++D+ DAK + HL+ F++ R
Sbjct: 48 LVFHRSRGIKASLAGRYGSIRQIRIGNKQKTKGTIFVVFDDVMDAKNTLHHLNIFHLQER 107
Query: 86 YLIVLYY 92
+ +
Sbjct: 108 TCCTVPH 114
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++FG YG+++ +R+ K RG AFV Y + +A+ A++ L
Sbjct: 509 IIIKNLPFEATRKDVLELFGAYGSVKSVRVPKKFDKSARGFAFVEYTMLKEAENAMNQLE 568
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y ++ + +DE+ KM +K
Sbjct: 569 GVHLLGRRLVMQYAEK-------ESDNAEDEIEKMTQK 599
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDH 76
++++ V+N P+ S EE+ D+F +YG ++++ + + GT A V + D A++A
Sbjct: 285 DKIILVKNFPYGTSQEEIRDLFAEYGPLKRVLMPPA----GTIAIVEFRDSPSARSAFTK 340
Query: 77 LS 78
L+
Sbjct: 341 LA 342
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYE 65
KG A + N+++ ++NLPF + +++ ++FG +G ++ +R+ K RG AFV +
Sbjct: 742 KGGASKTNKTNKII-IKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEFV 800
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
+ +A+ A+D L G ++ R L++ Y ++ D + + E+AKM +K
Sbjct: 801 LLKEAENAMDQLEGVHLLGRRLVMQYAEK-------DAEDAEAEIAKMTKK 844
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYE 65
KG A + N+++ ++NLPF + +++ ++FG +G ++ +R+ K RG AFV +
Sbjct: 742 KGGASKTNKTNKII-IKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEFV 800
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
+ +A+ A+D L G ++ R L++ Y ++ D + + E+AKM +K
Sbjct: 801 LLKEAENAMDQLEGVHLLGRRLVMQYAEK-------DAEDAEAEIAKMTKK 844
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L+V NL F+ + E+++++F YG+I+ + + +S+D+ +G +V +EDI A
Sbjct: 134 PSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIESA 193
Query: 71 KTAVDHLSGFNVANRYLIVLYYQ 93
K A + L G +A R + + + Q
Sbjct: 194 KKAHESLVGQEIAGRAIRLEFSQ 216
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 10 NARLPPEVNRVLYVRNLPFNISS----EEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
+A +PP N+ LYV NL IS E++ +F KYG I +I S RG AF+V++
Sbjct: 5 SADIPP--NQTLYVNNLYEKISKKKLIEQLLLLFSKYGPILEIVGSKSLKMRGQAFIVFK 62
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQ-----TKMSKKFDQKKKDDE 109
DI A A+ ++GFN +R + + Y + +K+ + +KK++ E
Sbjct: 63 DITSASNALREMNGFNFLDRPMKIQYCKSKSDAVSKLDGTYMEKKRERE 111
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
PP N+ L+V NLP S + +F ++ +++ + SK +G AF+ +ED + A
Sbjct: 164 PP--NKTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMVESK--KGIAFIEFEDEIKSGFA 219
Query: 74 VDHLSGFNVANRYLIVLYY 92
+ +L F V +V+ +
Sbjct: 220 MTNLQHFKVTPEKPMVVSF 238
>gi|67515655|ref|XP_657713.1| hypothetical protein AN0109.2 [Aspergillus nidulans FGSC A4]
gi|40746131|gb|EAA65287.1| hypothetical protein AN0109.2 [Aspergillus nidulans FGSC A4]
gi|259489698|tpe|CBF90183.1| TPA: U1 small nuclear ribonucleoprotein, putative (AFU_orthologue;
AFUA_5G11930) [Aspergillus nidulans FGSC A4]
Length = 252
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 10/114 (8%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDT 56
MAT+P+ + +PP N +YVRNL I E + +IF +YG I +I +
Sbjct: 1 MATVPV---PSNIPP--NPTVYVRNLEERIKLDQLKEALSEIFSEYGTILEIVAKRNLKA 55
Query: 57 RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
+G AF+V++++ A A+D ++GF++ ++ + VL Y +T+ ++ D+EL
Sbjct: 56 KGQAFIVFDNVDSATRAIDEVNGFDLFDKPM-VLDYAKTRSDATVRREGGDEEL 108
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP + +FG++ R++R+ + +G AFV YE+ A +
Sbjct: 173 LPP--NKILFLRELPDTADQGSLTAVFGRFEGFREVRLVPGR--KGIAFVEYENESGAIS 228
Query: 73 AVDHLSGFNVA--NRYLIVLYYQQ 94
A + SG + + + V Y +Q
Sbjct: 229 AKEATSGMPMGPEGKPIRVTYQRQ 252
>gi|408395814|gb|EKJ74987.1| hypothetical protein FPSE_04807 [Fusarium pseudograminearum CS3096]
Length = 242
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+N P + E + +FG++ +R++R+ ++ RG AF+ YE A T
Sbjct: 165 LPP--NKILFVQNFPEDYDVEALTSVFGRFEGLREVRLVPTR--RGIAFIEYETEQGAIT 220
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G N+ ++ + V Y +Q
Sbjct: 221 AKENTAGLNLGDKPIKVTYQRQ 242
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV+NL + E + D IF ++G + I + +G AF+VY++ A+ A++
Sbjct: 9 TVYVQNLEERVKLETLVDALRTIFSEFGNVVDIVAKKNLRAKGQAFIVYDNAESAQEAIE 68
Query: 76 HLSGFNV 82
++GF++
Sbjct: 69 EINGFDL 75
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-----AFVVYEDIYDAKTAV 74
+YV NLP N+ +E+YD+FGKYG I+ I I K TRG+ AFV Y DI DA+ A+
Sbjct: 12 CIYVGNLPGNVLEDEVYDLFGKYGRIKYIDI---KLTRGSSSTAYAFVHYYDIKDAEYAI 68
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKFDQKK 105
+ G+ L V + + K K+ +K+
Sbjct: 69 ERRDGYKFDGERLRVEFSGENKSFGKYRRKE 99
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 725 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAEAAMDQLQ 784
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y QQ D + ++E+A+M +K
Sbjct: 785 GVHLLGRRLVMQYAQQ-------DAENAEEEIARMTKK 815
>gi|327297312|ref|XP_003233350.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326464656|gb|EGD90109.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 256
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N +YVRNL I E++ +IF +YG+I +I ++ +G AF+V++++
Sbjct: 11 IPP--NPTVYVRNLEERIKVEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVE 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
A A+D ++GF + + + VL Y +TK ++ D+EL
Sbjct: 69 SATRAIDEVNGFELFEKPM-VLEYAKTKSDATVMREGGDEEL 109
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP ++ + IFG++ ++IR+ + +G AFV YE+ A +
Sbjct: 177 LPP--NKILFLRELPETYDADGLSAIFGRFPGFKEIRMVPGR--KGIAFVEYENESGAIS 232
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 233 AKEATSGMALGENEKPIKVTYQR 255
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV NLP N+ +E+ DIF KYG IR I I S S+D+ AF+ ++D DAK AV
Sbjct: 5 TVYVGNLPSNVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 79 GFNVANRYLIVLY 91
G+ + L V +
Sbjct: 65 GYEFDGKRLRVEF 77
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG+YG +R +R+ D RG AF + + +A++A+D L
Sbjct: 704 VIIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRGARGFAFADFTTVKEAQSAMDALK 763
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
++ R L++ + ++ D + + E+ KMQ+K G
Sbjct: 764 DTHLLGRRLVLDFAEE-------DPEDAEKEIEKMQQKIGA 797
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+VRNL +++S E++ F +G + QI I K T +G A+V Y D A+ A+
Sbjct: 308 LFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDPDSAEKALVDR 367
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G R + +L + K + K + ELAK+
Sbjct: 368 DGRTFQGRLIHIL-----PATAKRENKIDEFELAKL 398
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L++ NL FN + +Y+IFGK+G I +RI + +T +G +V Y I D
Sbjct: 271 IPSEPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDD 330
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
AK A++ L G + NR + + Y
Sbjct: 331 AKKALEALQGEYIDNRPVRLDY 352
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL N+ + + D+F ++G ++ +++ S+ +RG FV +E +A+ AVDH++
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDE 109
G V+ + L V Q Q+++ ++F+Q K++ +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQ 288
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I+ E + ++F YG I ++ + S ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSK 99
V + L V Q+ + K
Sbjct: 356 RIVGTKPLYVALAQRKEERK 375
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G+I ++ ++ +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRQ 177
>gi|71747852|ref|XP_822981.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832649|gb|EAN78153.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 117
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 19 RVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
R+L V +P + EE+Y +FG YG I+Q+RIGS T+G A VVYE A A++ L
Sbjct: 5 RILLVTGIPTKLCRGEELYKVFGNYGTIQQLRIGSDASTKGCAIVVYELCEAASAALEAL 64
Query: 78 SGFNV-ANRYLIVLYYQQTK 96
F V +R+L V Y +T+
Sbjct: 65 HDFKVDRDRHLRVSVYDETR 84
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL N+ + + D+F ++G ++ +++ S+ +RG FV +E +A+ AVDH++
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDE 109
G V+ + L V Q Q+++ ++F+Q K++ +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQ 288
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I+ E + ++F YG I ++ + S ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSK 99
V + L V Q+ + K
Sbjct: 356 RIVGTKPLYVALAQRKEERK 375
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G+I ++ ++ +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRQ 177
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + VL+V NL F+ + + +++ F +YG ++ +R+ + ++T +G A+V + D+ A
Sbjct: 409 PSEPSAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETA 468
Query: 71 KTAVDHLSGFNVANRYLIVLYYQ 93
K+A + +SG +A R + + Y Q
Sbjct: 469 KSAYEGVSGKEIAGRAVRLDYSQ 491
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL N+ + + D+F ++G ++ +++ S+ +RG FV +E +A+ AVDH++
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ + L V Q Q+++ ++F+Q K++
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQE 286
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I+ E + ++F YG I ++ + S ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQ 94
V + L V Q+
Sbjct: 356 RIVGTKPLYVALAQR 370
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG-SSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G+I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNG 160
Query: 80 FNVANRYLIVLYYQ 93
+ +R + V +++
Sbjct: 161 MLLNDRKVFVGHFK 174
>gi|261332829|emb|CBH15824.1| RBP15 [Trypanosoma brucei gambiense DAL972]
Length = 150
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 19 RVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
R+L V +P + EE+Y +FG YG I+Q+RIGS T+G A VVYE A A++ L
Sbjct: 38 RILLVTGIPTKLCRGEELYKVFGNYGTIQQLRIGSDASTKGCAIVVYELCEAASAALEAL 97
Query: 78 SGFNV-ANRYLIVLYYQQTK 96
F V +R+L V Y +T+
Sbjct: 98 HDFKVDRDRHLRVSVYDETR 117
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-----AFVVYEDIYDAKTAV 74
+YV NLP N+ +E+YD+FGK+G I+ I I K TRG+ AFV Y DI DA+ A+
Sbjct: 13 CIYVGNLPGNVLEDEVYDLFGKFGRIKYIDI---KLTRGSSSTAYAFVHYYDIKDAEYAI 69
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKFDQK 104
+ G+ L V + + K K+ +K
Sbjct: 70 ERRDGYKFDGERLRVEFSGENKSFGKYRRK 99
>gi|403165616|ref|XP_003325592.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165799|gb|EFP81173.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 759
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L ++NLPF I+ +E+Y++FG YG ++ IR+ D +RG FV Y +A+ A+ L
Sbjct: 637 LLIKNLPFEINKKELYELFGVYGKLKSIRLPKKLDRKSRGFGFVEYHTKKEAQEALKSLK 696
Query: 79 GFNVANRYLIVLY 91
++ R+L++ Y
Sbjct: 697 FSHLLGRHLVIEY 709
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L++RNL F+++ EE+ IF +G + Q+ I + + +G +V Y DA A L
Sbjct: 238 LFLRNLAFSVTEEEIRAIFEPFGNVAQVHILLDNERKPKGLGYVSYSRSSDALEAYRKLD 297
Query: 79 GFNVANRYLIVL 90
+ R L +L
Sbjct: 298 QSDFQGRLLHIL 309
>gi|344301140|gb|EGW31452.1| multiple RNA-binding domain-containing protein 1 [Spathaspora
passalidarum NRRL Y-27907]
Length = 841
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAVDHLS 78
L ++NLPF + +++ ++FG +G ++ +R+ D+ RG AFV + + +A+ A++ L
Sbjct: 718 LIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDSSARGFAFVEFNLMKEAENAMNQLE 777
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y +Q D + + E+ KM +K
Sbjct: 778 GVHLLGRRLVMQYAEQ-------DAEDAEAEIEKMTKK 808
>gi|342184388|emb|CCC93870.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 115
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 19 RVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
R+L V +P + EE+Y +FG YGAI+Q+RIGS T+G A VVYE A A++ L
Sbjct: 5 RILLVTGIPTKLCRGEELYKVFGSYGAIQQLRIGSDACTKGCAIVVYELCEAASAALEAL 64
Query: 78 SGFNV-ANRYLIVLYYQQTK 96
F V +R+L V Y + +
Sbjct: 65 HDFKVDKDRHLRVSVYDEMR 84
>gi|328354024|emb|CCA40421.1| Multiple RNA-binding domain-containing protein 1 [Komagataella
pastoris CBS 7435]
Length = 834
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++F +G ++ R+ D+ RG AFV + + +A+ A+D L
Sbjct: 712 IIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSARGFAFVEFSLLKEAEQAMDQLQ 771
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQ 114
G ++ R L++ Y QQ +M+KK ++ ELA +Q
Sbjct: 772 GVHLLGRRLVMEYAQQDAENAEEEIERMTKKVQKQVASRELASLQ 816
>gi|326481613|gb|EGE05623.1| U1 small nuclear ribonucleoprotein [Trichophyton equinum CBS
127.97]
Length = 256
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N +YVRNL I E++ +IF +YG+I +I ++ +G AF+V++++
Sbjct: 11 IPP--NPTVYVRNLEERIKVEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
A A+D ++GF + + + VL Y +TK ++ D+EL
Sbjct: 69 SATRAIDEVNGFELFEKPM-VLEYAKTKSDATVMREGGDEEL 109
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP + ++ + IFG++ +++R+ + +G AFV YE+ A +
Sbjct: 177 LPP--NKILFLRELPESYDADGLSAIFGRFPGFKEVRMVPGR--KGIAFVEYENESGAIS 232
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 233 AKEATSGMALGENEKPIKVTYQR 255
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 5 PLRKGN--ARLPPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTR 57
P+R+ A PP V+ + L V N+PF I S+E+ D+F K+G I + R S ++R
Sbjct: 339 PIREEQLPAMAPPNVDSMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESR 398
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
G AFV + + DA+ A+D + G R L V + +Q +
Sbjct: 399 GFAFVRFIEKRDAEDAIDGMEGQEFQGRDLRVQFAKQRR 437
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLPF IS ++ +IF +YG + +I + K T RG AFV E A++A+++L
Sbjct: 49 LYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAINNL 108
Query: 78 SGFNVANRYLIV 89
+G +V+ R ++V
Sbjct: 109 NGSSVSGRQIVV 120
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+A P + VL+V NL F+ + ++++++F YG+++ +R+ + +++ +G +V +E
Sbjct: 401 GDATSAP--SSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFE 458
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQ 93
D+ AK A + L+G +A R + + + Q
Sbjct: 459 DVESAKKAHEGLAGQEIAGRAVRLDFSQ 486
>gi|254574096|ref|XP_002494157.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
gi|238033956|emb|CAY71978.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
Length = 810
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++F +G ++ R+ D+ RG AFV + + +A+ A+D L
Sbjct: 688 IIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSARGFAFVEFSLLKEAEQAMDQLQ 747
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQ 114
G ++ R L++ Y QQ +M+KK ++ ELA +Q
Sbjct: 748 GVHLLGRRLVMEYAQQDAENAEEEIERMTKKVQKQVASRELASLQ 792
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLP+ + E++Y+ FGK+G I+++ + +S +G A V++++ DA A L
Sbjct: 313 LFVRNLPYTTTEEDLYEAFGKFGTIQEVHLPTNASGAGKGFALVLFDNPSDAVNAFQALD 372
Query: 79 GFNVANRYLIVLYYQQTKMS 98
G R L ++ + K S
Sbjct: 373 GVTFQGRILHIIPAEAKKQS 392
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 675 IVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNALK 734
Query: 79 GFNVANRYLIVLY 91
++ R L++ +
Sbjct: 735 DTHLLGRRLVLDF 747
>gi|71649467|ref|XP_813457.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70878340|gb|EAN91606.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 117
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 13 LPPEVNRVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+P E R+L V +P + EE+Y +FG YGAI+Q+R+G T+G A VVYE A
Sbjct: 1 MPDE--RILLVTGIPSKLCRGEELYKVFGSYGAIQQLRLGDDASTKGCAIVVYELCEAAS 58
Query: 72 TAVDHLSGFNV-ANRYLIVLYYQQTK 96
A++ L+ F V +RYL V Y + +
Sbjct: 59 AALEALNDFRVDKDRYLRVSVYDEVR 84
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 789
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y +Q + + +DE+A+M +K
Sbjct: 790 GVHLLGRRLVMQYAEQ-------ESEDAEDEIARMTKK 820
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDH 76
NRV+ V+N PF + EE+ D+F +G + + + + GT A + Y D+ A+ A
Sbjct: 499 NRVILVKNFPFGTTIEELGDLFLPFGKLERFLMPPA----GTIAIIQYRDVTSARAAFTK 554
Query: 77 LS 78
L+
Sbjct: 555 LA 556
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
LP E + L++ NL FN + +Y++F K+G I +RI + +T +G +V Y ++ D
Sbjct: 282 LPSEPSETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDD 341
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
AK A+D L G + NR + + Y
Sbjct: 342 AKKALDALQGEYIDNRPVRLDY 363
>gi|71665877|ref|XP_819904.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|31559105|gb|AAP50255.1| P14 U2 snRNP protein [Trypanosoma cruzi]
gi|70885225|gb|EAN98053.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 117
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 13 LPPEVNRVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
+P E R+L V +P + EE+Y +FG YGAI+Q+R+G T+G A VVYE A
Sbjct: 1 MPDE--RILLVTGIPSKLCRGEELYKVFGSYGAIQQLRLGDDASTKGCAIVVYELCEAAS 58
Query: 72 TAVDHLSGFNV-ANRYLIVLYYQQTK 96
A++ L+ F V +RYL V Y + +
Sbjct: 59 AALEALNDFRVDKDRYLRVSVYDEVR 84
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L VRN+PF S E+ ++FG +G ++ +R D +RG AFV Y DAKTA+ L+
Sbjct: 552 LLVRNVPFEASRSELRELFGSFGQLKSLRQPKKFDGTSRGFAFVEYVSSDDAKTAIKALA 611
Query: 79 GFNVANRYLIVLYYQQ 94
++ R L+V Y ++
Sbjct: 612 STHLLGRKLVVEYAKE 627
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQ--IRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+++N+P++ EE+ + +YG I I + S ++++G AFV + A A++ L
Sbjct: 109 LFLQNIPYSCKEEELREFISQYGEIVDVFIPLNSKRESKGYAFVTFMFPEQAIAAIEKLD 168
Query: 79 GFNVANRYLIV 89
G R L V
Sbjct: 169 GSVFQGRVLRV 179
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
++++ V+NLP+ +E+ +F +YG ++Q+ + ++ A V + +AK A + L
Sbjct: 291 DKIILVKNLPYTADRDELLSLFSQYGEVQQLVL---PESHVMALVTFSVPSEAKRAFNRL 347
Query: 78 S 78
S
Sbjct: 348 S 348
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLPF IS ++ ++F +YG + +I + K T RG AFV E A++A+D L
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 78 SGFNVANRYLIV 89
+G +++ R ++V
Sbjct: 66 NGTSISGRQIVV 77
>gi|307108943|gb|EFN57182.1| hypothetical protein CHLNCDRAFT_51257 [Chlorella variabilis]
Length = 105
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 1 MATIPLRK------GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---G 51
M T P R+ G R PP L++ +PF ++ ++ D F +YG +R++RI
Sbjct: 1 MTTPPWRRPTLPTAGTWRSPPARGTQLFIAGIPFMMTERDVVDKFDRYGPVREVRIVRHP 60
Query: 52 SSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
++ ++RG FV E + A AV L G + R L+V
Sbjct: 61 ATGESRGFGFVAMESVEAADRAVRKLDGTDWNGRRLLV 98
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV NLP ++ +E+ DIF KYG IR I I S S+D+ AF+ ++D DAK AV
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 79 GFNVANRYLIVLY 91
G+ + L V +
Sbjct: 65 GYEFDGKRLRVEF 77
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
++V+NLP + + + D+F K+G I + I S D ++G FV YE + DA+ AV+ L
Sbjct: 226 VFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNAL 285
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
+G +A + L V Q+ K ++ + K++ D L
Sbjct: 286 NGTELAGKTLFVARAQK-KAEREAELKQRYDAL 317
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAV 74
V+ + V+NLPF S ++++++F +G ++ +R+ K RG AFV + +A++A+
Sbjct: 733 VSSKIIVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLIPKEAQSAM 792
Query: 75 DHLSGFNVANRYLIVLYYQQ 94
D L G ++ R L++ Y +Q
Sbjct: 793 DQLQGVHLLGRRLVMQYAEQ 812
>gi|340521610|gb|EGR51844.1| predicted protein [Trichoderma reesei QM6a]
Length = 298
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+N+P E + IFG++ R+IR+ + RG AFV YE+ A T
Sbjct: 221 LPP--NKILFVQNVPDEYDVEGLTAIFGRFDGFREIRLVPGR--RGIAFVEYENEQGAIT 276
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G ++ ++ + V Y +Q
Sbjct: 277 AKENTAGMSLGDKMIKVTYQRQ 298
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 21 LYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
+YV NL + E + D IF ++G + I + +G AFVV+++ A A++
Sbjct: 66 VYVHNLEERVKPEVLTDALKTIFSEFGNVVDIVAKRNLKAKGQAFVVFDEPSAAHKAIEE 125
Query: 77 LSGFNV 82
+ GF +
Sbjct: 126 VEGFEL 131
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NL ++ E+ D+F K+G + + + + S+++RG AFV +ED+ DA AV L
Sbjct: 31 LYVANLAHRVTETELNDLFAKFGRLEKCEVITDPISRESRGFAFVTFEDVRDANDAVQEL 90
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
+G ++ R + V + ++ + K
Sbjct: 91 NGKDIQGRRIRVEHARRKRGHTK 113
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
+R LYV NLP +I E+ D+F KYG I I + G AFV +ED +DAK A+
Sbjct: 4 ASRTLYVGNLPGDIRVREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRG 63
Query: 77 LSGFNV-ANRYLIVLYYQQTKMSKKFD 102
L G+N A R + L + + S D
Sbjct: 64 LDGYNFDACRLRVELAHGGRRHSSPVD 90
>gi|254565225|ref|XP_002489723.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|238029519|emb|CAY67442.1| RNA-binding protein that carries poly(A)+ mRNA from the nucleus
into the cytoplasm [Komagataella pastoris GS115]
gi|328350141|emb|CCA36541.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 329
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
L+VR LP ++ EE+ D+FGK+G I++++I RG AFV YE+ DA A+++L+
Sbjct: 9 LFVRPLPGDVRPEELQDLFGKFGPIKEVKI-----MRGYAFVEYEEGADASAALENLNNT 63
Query: 81 NVANRYLIVLYYQQ 94
++ L + + ++
Sbjct: 64 PFGDQDLQIEFAKE 77
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NL ++ EE+ +F K+G + + I S+++RG AFV +ED+ DA AV L
Sbjct: 76 LYVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDAVQEL 135
Query: 78 SGFNVANRYLIVLY 91
+G ++ R + V +
Sbjct: 136 NGKDIQGRRMRVEH 149
>gi|302891485|ref|XP_003044624.1| hypothetical protein NECHADRAFT_100804 [Nectria haematococca mpVI
77-13-4]
gi|256725549|gb|EEU38911.1| hypothetical protein NECHADRAFT_100804 [Nectria haematococca mpVI
77-13-4]
Length = 243
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+NLP + E + +FG++ R++R+ + RG AFV YE A T
Sbjct: 166 LPP--NKILFVQNLPEDYDIEALTGVFGRFEGFREVRLVPGR--RGIAFVEYEAEQGAIT 221
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G ++ + + V Y +Q
Sbjct: 222 AKENTAGMSLGEKPIKVTYQRQ 243
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 20 VLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV+NL + +E + +F ++G + + + +G AFVV++D A++A++
Sbjct: 9 TVYVQNLEERVKLESLTEALRTVFSEFGNVVDVVAKKNLKAKGQAFVVFDDAESARSAIE 68
Query: 76 HLSGFNVANRYLIV 89
+ GF + + + V
Sbjct: 69 EVDGFELFGKPMKV 82
>gi|118395954|ref|XP_001030321.1| polyadenylate-binding protein, putative [Tetrahymena thermophila]
gi|89284620|gb|EAR82658.1| polyadenylate-binding protein, putative [Tetrahymena thermophila
SB210]
Length = 231
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT--AFVVYEDIYDA 70
+P R++ V NL NI++EE Y++F KYG+I Q +I + K + +VVY D A
Sbjct: 47 IPEHKKRIVKVYNLVPNINNEEFYNLFVKYGSIEQSKIETDKKGKSEEKGYVVYRDNDAA 106
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
K A+D L+G + R + V +
Sbjct: 107 KRAIDDLNGVELEGRIITVEF 127
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 757 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 816
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R LI+ Y ++ +M+KK ++ +E+A ++ K G
Sbjct: 817 GVHLLGRRLIMQYAEEDAVNAEEEIARMTKKVRKQVATNEMAALRNKGG 865
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 3 TIPLRKGNARLPPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTR 57
T+P + R ++N L++RN+ +N E+ +FG +G + ++ + + ++
Sbjct: 319 TVPQKTDEERAIEKINETGRLFLRNILYNSKEEDFKALFGPFGDLEEVHVALDTRTGQSK 378
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQ 103
G A+V+++D +A A L R L +L ++ K S + D+
Sbjct: 379 GFAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKK-SHRLDE 423
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++FG +G ++ +R+ K RG AFV + + +A+ A++ L
Sbjct: 715 IIIKNLPFEATRKDILELFGAFGQLKSVRVPKKFDKSARGFAFVEFNLLKEAENAMNQLE 774
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y +Q D + + E+ KM K
Sbjct: 775 GVHLLGRRLVMQYAEQ-------DSESAEAEIEKMTSK 805
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L++RN+ + + E D+F +YG ++++ I T +G +V +E+ DA A + L
Sbjct: 310 LFIRNILYTSTEAEFRDLFEQYGPLQEVHIAVDTRTGKSKGFVYVQFENSSDAVQAYEAL 369
Query: 78 SGFNVANRYLIVLYYQQTK 96
R L +L ++ K
Sbjct: 370 DKQIFQGRLLHILPGEKKK 388
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV NLP ++ +E+ DIF KYG IR I I S S+D+ AF+ ++D DAK AV
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 79 GFNVANRYLIVLY 91
G+ + L V +
Sbjct: 65 GYEFDGKRLRVEF 77
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAK 71
P N+ L+VRN+ +I +E+ F +YG+I+ + I +K RG A+V + DI+DA+
Sbjct: 7 PRRNKSLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAE 66
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMS 98
A + + G V R++ V + + + S
Sbjct: 67 DAQEGMDGRKVCGRFIDVQFAKGDRKS 93
>gi|346977343|gb|EGY20795.1| U1 small nuclear ribonucleoprotein A [Verticillium dahliae VdLs.17]
Length = 246
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+++NLP + E + DIFG++ R++R+ + RG AFV Y+ A T
Sbjct: 168 LPP--NKILFIQNLPEDFDIEALTDIFGRFDGFREVRLVPGR--RGIAFVEYDGEQGAIT 223
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G + I + YQ+
Sbjct: 224 AKENTAGMVLGESSTIKVTYQR 245
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 20 VLYVRNLP----FNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YVRNL ++ E + IF +YG + +I ++ ++G AF+V++D A+ A+D
Sbjct: 9 TVYVRNLEERVKIDVLKESLLQIFSEYGNVLEIIAKTNLKSKGQAFIVFDDADSAQNAID 68
Query: 76 HLSGFNVANRYLIV 89
+ GF + ++ + V
Sbjct: 69 EVQGFQLFDKPMQV 82
>gi|71028784|ref|XP_764035.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350989|gb|EAN31752.1| hypothetical protein, conserved [Theileria parva]
Length = 727
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAK 71
P E N V+ V+NLPF + +E+ ++F Y ++ +RI S RG FVV+ DAK
Sbjct: 643 PTEENDVIIVKNLPFQATKKELLELFKYYSNVKTVRIPKSAGNTHRGFGFVVFMSKNDAK 702
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTK 96
A+++L ++ R L++ Y + ++
Sbjct: 703 LAMENLKNVHLYGRRLVLQYVENSQ 727
>gi|84996687|ref|XP_953065.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304061|emb|CAI76440.1| hypothetical protein, conserved [Theileria annulata]
Length = 716
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAK 71
P E N V+ V+NLPF + +E+ ++F Y ++ +RI S RG FVV+ DAK
Sbjct: 631 PKEENDVIIVKNLPFQATKKELLELFKYYANVKTVRIPKSAGNTHRGFGFVVFMSKNDAK 690
Query: 72 TAVDHLSGFNVANRYLIVLYYQQT 95
A+++L ++ R L++ Y + +
Sbjct: 691 LAMENLKNVHLYGRRLVLQYVENS 714
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L++ NL F+ + +Y+IFGK+G I +RI + +T +G +V Y + D
Sbjct: 244 VPSEPSDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTED 303
Query: 70 AKTAVDHLSGFNVANR 85
AK A+D L G ++ +R
Sbjct: 304 AKKALDALQGESINDR 319
>gi|296809910|ref|XP_002845293.1| small nuclear ribonucleoprotein U [Arthroderma otae CBS 113480]
gi|238842681|gb|EEQ32343.1| small nuclear ribonucleoprotein U [Arthroderma otae CBS 113480]
Length = 256
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N +YVRNL I E++ +IF +YG+I +I ++ +G AF+V++++
Sbjct: 11 IPP--NPTVYVRNLEERIKIEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
A A+D ++GF + + + VL Y +T+ ++ D+EL
Sbjct: 69 SATRAIDEVNGFELFEKPM-VLEYAKTRSDATVMREGGDEEL 109
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP ++ + IFG++ +++R+ + +G AFV Y++ A +
Sbjct: 177 LPP--NKILFLRELPETYDADGLSAIFGRFPGFKEVRMVPGR--KGIAFVEYDNESGAIS 232
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 233 AKEATSGMALGENEKPIKVTYQR 255
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++D+F +G ++ +R+ K RG AF+ + +A+ A+D L
Sbjct: 740 IIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSARGFAFIEFLLPKEAENAMDQLQ 799
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y Q+ ++ ++E+++M +K
Sbjct: 800 GVHLLGRRLVMQYAQEEAVN-------AEEEISRMTQK 830
>gi|223995723|ref|XP_002287535.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
gi|220976651|gb|EED94978.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
Length = 253
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFV 62
+ G+A+ P N L++ ++P + S++EMY +F ++G + RI DT RG FV
Sbjct: 56 VEPGSAKGPEGAN--LFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFV 113
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQ 93
Y+ A A+ HL+G++V + L V + Q
Sbjct: 114 SYDSARSAADAISHLNGYSVKGKRLKVQHKQ 144
>gi|281202145|gb|EFA76350.1| U2 small nuclear ribonucleoprotein B [Polysphondylium pallidum
PN500]
Length = 246
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 17 VNRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
+N+ +YV NL S +E++Y +F YG+I +I + RG AF+V++DI A
Sbjct: 27 MNQTIYVNNLNEKPSKKKLTEQLYSLFSPYGSILEIVAAKRQKMRGQAFIVFKDITSASN 86
Query: 73 AVDHLSGFNVANRYLIVLYYQQ-----TKMSKKFDQKKKDDE 109
A+ ++GF R + + Y + +K+ + +KK++ E
Sbjct: 87 ALREMNGFEFLGRPMSIQYAKSKSDAVSKLDGTYIEKKRERE 128
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 5 PLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVY 64
PL+ A PP N++L+V NLP + +F ++ + I + ++K +G AFV +
Sbjct: 162 PLQPREA--PP--NKILFVENLPEQCEEMMLNMLFSQFPGFQGISMTTAK--KGVAFVEF 215
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIVLYY 92
+D + A+ HL GF V +V+ +
Sbjct: 216 DDDSKSAVAMTHLQGFKVTPEKPMVISF 243
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAV 74
+N + V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+
Sbjct: 727 INGKIIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAM 786
Query: 75 DHLSGFNVANRYLIVLYYQQ 94
D L G ++ R L++ Y +Q
Sbjct: 787 DQLEGVHLLGRRLVMQYAEQ 806
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDH 76
+R++ V+N P + EE+ ++F +G + ++ + S GT A V Y D+ A+ A
Sbjct: 499 DRIILVKNFPHGTTREELAELFLPFGKLLRLLMPPS----GTIAIVQYRDVPSARAAFSK 554
Query: 77 LS 78
LS
Sbjct: 555 LS 556
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AF+ + +A+ A+D L
Sbjct: 745 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFIEFLLPKEAENAMDQLQ 804
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y Q+ D ++E+A+M +K
Sbjct: 805 GVHLLGRRLVMQYAQE-------DAADAEEEIARMTKK 835
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVD 75
RV+++ N+P+ +S E++ DIFG+ G + R+ K+T +G F+ Y D A +AV
Sbjct: 9 RVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVR 68
Query: 76 HLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDD 108
+L+ F++ R L V Y + + +Q + ++
Sbjct: 69 NLNDFDLKGRTLRVDYSNDNRGTSNQNQTQDNN 101
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 3 TIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFV 62
PL+ R+ +R +YV NLP +I E+ D+F KYG I I + G AFV
Sbjct: 17 NFPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFV 76
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIV 89
+ED+ DA+ A+ G++ L V
Sbjct: 77 EFEDVQDAEDAIRGRDGYDFDGHRLRV 103
>gi|198457253|ref|XP_001360605.2| GA10094 [Drosophila pseudoobscura pseudoobscura]
gi|198135915|gb|EAL25180.2| GA10094 [Drosophila pseudoobscura pseudoobscura]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAK 71
P+ NR + V L N S E++ D+F KYG I +I++ + +RG F+ ++++ DA+
Sbjct: 65 PKTNRCIGVFGLSTNTSQEKVRDLFSKYGPIERIQMIIDAQTHRSRGFCFIYFQNVADAR 124
Query: 72 TAVDHLSGFNVANRYLIV 89
A D G + NR + V
Sbjct: 125 VAKDSCCGMEIDNRRIRV 142
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVD 75
R L+V NLP +E+ ++FG YG + + + +T RG FV + +A+TA++
Sbjct: 128 RELFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFVTMRSLAEARTAIN 187
Query: 76 HLSGFNVANRYLIV 89
L GF++ R + V
Sbjct: 188 ALDGFDLDGREMFV 201
>gi|195150456|ref|XP_002016170.1| GL10640 [Drosophila persimilis]
gi|194110017|gb|EDW32060.1| GL10640 [Drosophila persimilis]
Length = 277
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYE 65
G + P+ NR + V L N S E++ D+F KYG I +I++ + +RG F+ ++
Sbjct: 88 GGSSERPKTNRCIGVFGLSTNTSQEKVRDLFSKYGPIERIQMIIDAQTHRSRGFCFIYFQ 147
Query: 66 DIYDAKTAVDHLSGFNVANRYLIV 89
++ DA+ A D G + NR + V
Sbjct: 148 NVADARVAKDSCCGMEIDNRRIRV 171
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 14 PPEVNRVLYVRNLPFNIS-SEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYD 69
PP N LYVRNLP ++S +E+M ++FGKYG I I I +++ RG A+V ++DI D
Sbjct: 9 PP--NTSLYVRNLPDDVSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQFDDIRD 66
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
A+ A+ L + R L + Y
Sbjct: 67 AEDAMYALDRYRFYGRELEIQY 88
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
PL+ R+ +R +YV NLP +I E+ D+F KYG I I + G AFV
Sbjct: 18 FPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVE 77
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIV 89
+ED+ DA+ A+ G++ L V
Sbjct: 78 FEDVQDAEDAIRGRDGYDFDGHRLRV 103
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 3 TIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFV 62
PL+ R+ +R +YV NLP +I E+ D+F KYG I I + G AFV
Sbjct: 17 NFPLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFV 76
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIV 89
+ED+ DA+ A+ G++ L V
Sbjct: 77 EFEDVQDAEDAIRGRDGYDFDGHRLRV 103
>gi|358391000|gb|EHK40405.1| hypothetical protein TRIATDRAFT_153359 [Trichoderma atroviride IMI
206040]
Length = 839
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLP+ + E+++ FG++G ++++ + +S +G A V+Y+D DA A L
Sbjct: 315 LFVRNLPYTATEEDLHQKFGEFGTLQEVHLPTNASGVRKGFALVLYDDSSDAVKAFQALD 374
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKK 105
G R L ++ + K+ +F K
Sbjct: 375 GVTFQGRILHIIPAEAKKLQDEFGMSK 401
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 717 IVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNALK 776
Query: 79 GFNVANRYLIVLY 91
++ R L++ +
Sbjct: 777 DTHLLGRRLVLDF 789
>gi|294656916|ref|XP_002770331.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
gi|199431836|emb|CAR65685.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
Length = 842
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++FG +G ++ +R+ K RG AFV + + +A+ A++ L
Sbjct: 716 IIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEFSLLKEAENAMNQLE 775
Query: 79 GFNVANRYLIVLYYQQ 94
G ++ R L++ Y +Q
Sbjct: 776 GVHLLGRRLVMQYAEQ 791
>gi|326472389|gb|EGD96398.1| U1 small nuclear ribonucleoprotein [Trichophyton tonsurans CBS
112818]
Length = 267
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 21 LYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYVRNL I E++ +IF +YG+I +I ++ +G AF+V++++ A A+D
Sbjct: 28 LYVRNLEERIKVEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVDSATRAIDE 87
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
++GF + + + VL Y +TK ++ D+EL
Sbjct: 88 VNGFELFEKPM-VLEYAKTKSDATVMREGGDEEL 120
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP + ++ + IFG++ +++R+ + +G AFV YE+ A +
Sbjct: 188 LPP--NKILFLRELPESYDADGLSAIFGRFPGFKEVRMVPGR--KGIAFVEYENESGAIS 243
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 244 AKEATSGMALGENEKPIKVTYQR 266
>gi|398398892|ref|XP_003852903.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
gi|339472785|gb|EGP87879.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
Length = 770
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAVDHLS 78
L ++NLPF + +++ +FG YG +R +R+ ++ RG AF + + +A++A++ L
Sbjct: 650 LLIKNLPFEATKKDVRALFGAYGQLRSVRVPKKMNSAARGFAFADFTTVKEAQSAMEALR 709
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
++ R L++ + + D + + E+ KMQ+K G
Sbjct: 710 DTHLLGRRLVIDFASE-------DPEDAEAEIEKMQQKVGA 743
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+VRNLPFN+ E++ F YG + ++ + T +G ++ + + A+ A
Sbjct: 249 LFVRNLPFNVQKEDLQAEFASYGNLEEVHVPLDPKTGAGKGFGYIQFSNPDSAEQAFVDR 308
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G R L VL S K + K D EL+K+
Sbjct: 309 DGQTFQGRLLHVL-----PGSAKRENKLDDFELSKL 339
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLPF+ S +E+ ++F YG + +R+ + +DT RG FV D DA +A++ L
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDT-DAASAIEAL 62
Query: 78 SGFNVANRYLIVLYYQQTK 96
G + R L V Q+ K
Sbjct: 63 DGKDFGGRNLRVNEAQERK 81
>gi|225434417|ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
gi|297745807|emb|CBI15863.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 3 TIPLRKGN--ARLPPEV-NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT 59
T P R+GN AR P N +L+++NLP +S + +F +Y R++R+ +K G
Sbjct: 141 TPPFRQGNQGAREPEAAPNNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAKP--GI 198
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
AFV +ED + A++ L GF + + + + Y
Sbjct: 199 AFVEFEDDVQSSMAMEALQGFKITPQNPMAIAY 231
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N+ +Y++NL + EE+ Y +F +YG I + + RG A+VV+ ++
Sbjct: 6 IPP--NQSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFSEVT 63
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
A AV + F ++ + V Y
Sbjct: 64 AASNAVRQMQNFPFYDKPMRVQY 86
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+++ PP + L++ NL FN + + +++IFG+YG + R+ + DT +G +V +
Sbjct: 355 GDSQSPP--SDTLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHPDTQQPKGFGYVQFS 412
Query: 66 DIYDAKTAVDHLSGFNVANR 85
+ +AK A++ L+G + NR
Sbjct: 413 SVDEAKAALEALNGEYIENR 432
>gi|325189852|emb|CCA24334.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 938
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKD---TRGTAFVVYEDIYDAKT 72
++VRNLPF I+S+E+ D+F + G ++++ + G SKD TRG AFV + DA
Sbjct: 9 TIFVRNLPFQITSKEVEDLFSQVGPVKKVDLIKNKGKSKDDTLTRGFAFVRFALESDAVL 68
Query: 73 AVDHLSGFNVANRYLIVLY 91
A++ ++ R L ++Y
Sbjct: 69 AIEKMNKSEFQGRKLCIVY 87
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVV 63
R G+ ++ R L++RN+ F + E + F +G + RI +SK ++G AFV
Sbjct: 457 RTGHLDTNEQLERTLFLRNVSFQTTDEGLKTFFQTFGGVEYTRIVYDPNSKLSKGVAFVR 516
Query: 64 YEDI 67
++DI
Sbjct: 517 FKDI 520
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQ----------IRIGSSKD----------TRGTA 60
L VRNL F + E+++ +F +GA+ + I + + D +RG
Sbjct: 270 LIVRNLSFQATDEDLHRVFSPFGAVSEAHVVRLPVDTIAVSDNDDKEGSVSILGRSRGFG 329
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
FV + +I A +AV ++G + R ++V +
Sbjct: 330 FVQFNEIEAAASAVKAINGNKLKGREIVVDF 360
>gi|224009920|ref|XP_002293918.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970590|gb|EED88927.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
++ NLP N++ ++ I +YG I I + KD+ +G AFV YED AVD+L
Sbjct: 36 IHAGNLPLNLTEGDVLCILSQYGEIDDIHLVRDKDSGKSKGFAFVKYEDARSCVLAVDNL 95
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
G V R L V + + ++ K ++K+D L K ++ G S+
Sbjct: 96 CGSMVLGRTLRVDHVENYRLPKHI--QEKEDGLNKEGDEEGSSS 137
>gi|323338031|gb|EGA79266.1| Npl3p [Saccharomyces cerevisiae Vin13]
Length = 357
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N L+VR P ++ E+ +IFG +G +++++I G AFV +E+ A A++ +
Sbjct: 124 NTRLFVRPFPLDVQESELNEIFGPFGPMKEVKI-----LNGFAFVEFEEAESAAKAIEEV 178
Query: 78 SGFNVANRYLIVLY 91
G + AN+ L V+Y
Sbjct: 179 HGKSFANQPLEVVY 192
>gi|70989751|ref|XP_749725.1| pre-mRNA branch site protein p14 [Aspergillus fumigatus Af293]
gi|66847356|gb|EAL87687.1| pre-mRNA branch site protein p14, putative [Aspergillus fumigatus
Af293]
gi|159129133|gb|EDP54247.1| pre-mRNA branch site protein p14, putative [Aspergillus fumigatus
A1163]
Length = 100
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 31/35 (88%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIR 46
+L PE NR+L+V+NL +N+++E+++D+FGK+G IR
Sbjct: 4 KLAPEANRILFVKNLNYNVTAEQLFDLFGKFGPIR 38
>gi|342885057|gb|EGU85166.1| hypothetical protein FOXB_04281 [Fusarium oxysporum Fo5176]
Length = 243
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+N P E + +FG++ R++R+ + RG AFV YE A T
Sbjct: 166 LPP--NKILFVQNFPEGYDIETLTSVFGRFDGFREVRLVPGR--RGIAFVEYEAEQGAIT 221
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G ++ ++ + V Y +Q
Sbjct: 222 AKENTAGLHLGDKPIKVTYQRQ 243
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV+NL + + + D +F ++G + I + +G AFVVY++ A+ A++
Sbjct: 9 TVYVQNLEERVKLDALVDTLRTVFAEFGNVVDIVAKKNLRAKGQAFVVYDNPESAQDAIN 68
Query: 76 HLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ GF + + + L + +T+ K + K +EL + +++ + KDK
Sbjct: 69 EIDGFELFGKPM-KLAFARTQSDKTIELKGNQEEL-EQHKRHRQAEKDK 115
>gi|383156180|gb|AFG60324.1| Pinus taeda anonymous locus 0_7148_02 genomic sequence
gi|383156182|gb|AFG60325.1| Pinus taeda anonymous locus 0_7148_02 genomic sequence
gi|383156184|gb|AFG60326.1| Pinus taeda anonymous locus 0_7148_02 genomic sequence
gi|383156186|gb|AFG60327.1| Pinus taeda anonymous locus 0_7148_02 genomic sequence
gi|383156188|gb|AFG60328.1| Pinus taeda anonymous locus 0_7148_02 genomic sequence
Length = 33
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 92 YQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
YQQ+KM+KK D KKK+D+L KMQEKYGVSTKDK
Sbjct: 1 YQQSKMTKKVDNKKKEDDLTKMQEKYGVSTKDK 33
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVD 75
+ LYV NLP++ + +E+ ++FG+YG + +I + ++T RG FV D DA+ A+D
Sbjct: 3 KTLYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMSDD-DAQKAID 61
Query: 76 HLSGFNVANRYLIV 89
L+G N R L V
Sbjct: 62 SLNGVNFGGRNLKV 75
>gi|301101828|ref|XP_002900002.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
gi|262102577|gb|EEY60629.1| Poly(U)-binding-splicing factor PUF60, putative [Phytophthora
infestans T30-4]
Length = 444
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYD 69
P ++ R LY+ NL +++ E++ ++F +G IR I + G+S+ ++G F+ YED+
Sbjct: 113 PTDLARRLYIGNLYYDLKEEDISNVFAPFGTIRSIDLSLEPGASR-SKGFCFLEYEDVLA 171
Query: 70 AKTAVDHLSGFNVANRYLIV 89
A++AV L+G +ANR + V
Sbjct: 172 AESAVQVLNGTPLANRAIRV 191
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS----SKDTRGTAFVVYEDIYDAKTAV 74
+ +YV N+ ++S+ + IF +GAI + + RG F+ + + A +A+
Sbjct: 218 KCIYVANVRVELNSQHLESIFSPFGAIHSCVMTAVSPLESGHRGYGFMRFVEESCALSAI 277
Query: 75 DHLSGFNVANRYLIV 89
H++GF +A + L V
Sbjct: 278 QHMNGFELAGQALKV 292
>gi|380483560|emb|CCF40546.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 246
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+NLP + + + IFG++ R++R+ + RG AFV YE A T
Sbjct: 168 LPP--NKILFVQNLPEDYDVDAVTSIFGRFEGFREVRLVPGR--RGIAFVEYEGEQGAIT 223
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G + + + I + YQ+
Sbjct: 224 AKENTAGMVLGDSHTIKVTYQR 245
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 21 LYVRNLPFNISSE----EMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
+YVRNL + + + IF +YG + +I ++ +G AFVV+ D A+ A++
Sbjct: 10 VYVRNLEERVKVDLLKGALLQIFSEYGNVIEIVAKTNLKAKGQAFVVFADPEAARKAIEE 69
Query: 77 LSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ GF + + + + L ++ + K DDE ++ ++ ++ KDK
Sbjct: 70 VQGFELFEKPMQLALARTRSDATVK---TAGDDEEFELHKRRRLAEKDK 115
>gi|448521115|ref|XP_003868429.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis Co 90-125]
gi|380352769|emb|CCG25525.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis]
Length = 819
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF S +++ ++FG +G ++ +R+ D RG AFV + + +A+ A+ L
Sbjct: 698 IIIKNLPFEASRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLLKEAEDAMKQLE 757
Query: 79 GFNVANRYLIVLYYQQ 94
G ++ R L++ Y +Q
Sbjct: 758 GVHLLGRRLVMQYAEQ 773
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+GA +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + D+F ++G + +++ SS +RG FV +E +A+ AV H++
Sbjct: 168 IYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRDSSGHSRGFGFVNFEKHEEAQKAVVHMN 227
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+Q K+D
Sbjct: 228 GKEVSGRLLYVGRAQKRLERQNELKRRFEQMKQD 261
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I+ E++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 271 LYVKNLDDSINDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 330
Query: 80 FNVANRYLIVLYYQQTKMSK 99
V + L V Q+ + K
Sbjct: 331 RIVGTKPLYVALAQRKEERK 350
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A+ ++G
Sbjct: 76 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHDAAQRAISTMNG 135
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 136 MLLNDRKVFVGHFKSRR 152
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 1 MATIPLRKGNAR------LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK 54
M+T GN R +P E + L++ NL FN + +Y+ F KYG I +RI +
Sbjct: 246 MSTSKPAGGNDRAKKFGDVPSEPSDTLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHP 305
Query: 55 DT---RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
+T +G +V + +I DAK A++ L G + NR + + Y
Sbjct: 306 ETEQPKGFGYVQFSNIEDAKKALEGLQGEYIDNRAVRLDY 345
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
VL+V N+ F+++ + ++++F +YG ++ +R+ + +DT +G +V + D+ AK A +
Sbjct: 421 VLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEG 480
Query: 77 LSGFNVANRYLIVLYYQ 93
G +V R + + Y Q
Sbjct: 481 ARGMDVGGRTIRLDYAQ 497
>gi|388581139|gb|EIM21449.1| hypothetical protein WALSEDRAFT_38416, partial [Wallemia sebi CBS
633.66]
Length = 866
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 11 ARLPP-EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYED 66
A+ PP E L+VRN+PF + E++YD+F K+G +R R+ ++ +RG FV + +
Sbjct: 408 AKAPPLEDGLTLFVRNIPFEATQEDLYDVFRKFGKLRYARVTMDYETERSRGNGFVAFWN 467
Query: 67 IYDAKTAV 74
+ DA+ +
Sbjct: 468 MKDAQECL 475
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKD----TRGTAFVVYEDIYDAKTAV 74
L VRNL FNI+ +++ F +G I I + + +KD +G FV Y +DA+ A+
Sbjct: 220 LIVRNLNFNITRDDLKATFIPFGDIHSITLPTIEAKDGSLHNKGYGFVWYTFYHDAQKAI 279
Query: 75 DHLSGFNV 82
D ++G +V
Sbjct: 280 DGMNGKSV 287
>gi|296203566|ref|XP_002748951.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Callithrix
jacchus]
Length = 604
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK--DTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+N ++ E + D+FGK+G +++ + + ++G FV +E DA+ AVD L+
Sbjct: 161 VYVKNFGEDMDDEHLKDLFGKFGPTLSVKVMTDERGKSKGFGFVSFERGEDAQKAVDELN 220
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 221 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQD 254
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
NLPF + +++ ++FG +G ++ +R+ D RG AFV + + +A+TA++ L G ++
Sbjct: 724 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMNQLEGVHL 783
Query: 83 ANRYLIVLYYQQ 94
R L++ Y +Q
Sbjct: 784 LGRRLVMQYAEQ 795
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
L++RN+ + S E+ +F +YGA+ ++ I + ++G +V + DA A L
Sbjct: 313 LFIRNISYEASEEDFRKLFSQYGALEEVHIAIDTRTGKSKGFLYVQFSKKDDATRAYRSL 372
Query: 78 SGFNVANRYLIVLYYQQTKMSK--KFDQK----KKDDELAK 112
R L +L Q K + +FD K KK EL K
Sbjct: 373 DKQIFQGRLLHILPADQKKDHRLDEFDLKNLPLKKQRELKK 413
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL F+ + +Y++F KYG I +RI + +T +G +V Y D+ A
Sbjct: 256 PSEPSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESA 315
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 316 KKALDALQGEYINNR 330
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF S +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 721 IIVKNLPFEASKKDIRTLFGTYGQLRSVRVPKKFDNTARGFAFAEFVTAREAENAIEALK 780
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + D ++E+ KMQ+K G
Sbjct: 781 DTHLLGRRLVIEFAAE-------DAVDAEEEIEKMQKKVG 813
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIR--IGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLP+ + +E+ F KYGA+ +I + +S ++G V YED A A ++
Sbjct: 317 LFVRNLPYTATEDELRVHFEKYGALEEIHLPLDASGTSKGFVLVQYEDHAAAAEAFHNVD 376
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G R L +L + K D+K + E+AK+
Sbjct: 377 GEPFQGRLLHIL-----PAAAKRDKKLDEFEIAKL 406
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 7 RKGNARLPPEV-NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFV 62
R+G P L++ NL FN++ +E+ + F +YG + +R + +DT +G +V
Sbjct: 268 RQGRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYV 327
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
Y D+ A+ AV+ L+G +A R L + Y
Sbjct: 328 EYGDVETAQKAVEGLNGVEIAGRSLRLDY 356
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis
UAMH 10762]
Length = 337
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVD 75
RV+++ N+P+ +S E++ +IFG+ G + R+ K+T +G F+ Y D+ A +AV
Sbjct: 9 RVVFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDVDAAASAVR 68
Query: 76 HLSGFNVANRYLIVLY 91
+L+ F V R L V Y
Sbjct: 69 NLNEFEVMGRTLRVDY 84
>gi|71412352|ref|XP_808365.1| RNA-binding protein 5 [Trypanosoma cruzi strain CL Brener]
gi|70872555|gb|EAN86514.1| RNA-binding protein 5, putative [Trypanosoma cruzi]
Length = 305
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKT 72
E R +YV +LP + ++++D+F +YG I RI K TR G F++Y+++ A
Sbjct: 70 EFGRNVYVASLPLDFDDQQLFDLFAQYGPISSARIMRKKGTRESKGYGFILYKNVASAAL 129
Query: 73 AVDHLSG 79
A+ LSG
Sbjct: 130 AISSLSG 136
>gi|50552626|ref|XP_503723.1| YALI0E09174p [Yarrowia lipolytica]
gi|49649592|emb|CAG79313.1| YALI0E09174p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAV 74
+RV+YV ++P++ + E+M DIF G + +++ K+T +G F Y D A++A+
Sbjct: 3 DRVVYVGSIPYDQTEEQMLDIFKSVGPVISLKLMFDKETGRSKGYGFAEYPDADTARSAI 62
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKFDQKKK 106
+L+GF V +R L V + + ++ + F + +
Sbjct: 63 RNLNGFQVGSRQLRVDHSHEGQVREFFASQNR 94
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+YV+N+PF+++ EE+ +FGKYG I I D ++G FV +E DA+ AVD L
Sbjct: 211 IYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAVDDLH 270
Query: 79 GFNVANRYLIVLYYQ-QTKMSKKFDQKKKDDELAKMQEKYGVS 120
+ + L V Q + + ++ ++ ++ +L KM + GV+
Sbjct: 271 KKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVN 313
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 29/136 (21%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK--DTRGTAFVV 63
LRKGN N ++++NL +I + ++D F +G I +I + +++G FV
Sbjct: 110 LRKGN-------NGNIFIKNLDPSIDHKALHDTFSAFGNILSCKIAHDEQGNSKGYGFVH 162
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLYY-----QQTKMSKK-------------FDQKK 105
YE + A++A+ ++G + +R + V ++ +++K+ + FD
Sbjct: 163 YETLEAAESAIKSVNGMLLNDRKVFVGHHISRKERESKLGESRVQFTNIYVKNIPFD--V 220
Query: 106 KDDELAKMQEKYGVST 121
D+EL+++ KYG T
Sbjct: 221 TDEELSQLFGKYGTIT 236
>gi|347734520|ref|ZP_08867565.1| ss-DNA binding protein 12RNP2 [Desulfovibrio sp. A2]
gi|347516846|gb|EGY24046.1| ss-DNA binding protein 12RNP2 [Desulfovibrio sp. A2]
Length = 88
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTA 73
+++ LYV NLPF+ S +E+ D+F ++G + +++ S ++T RG FV E DA +A
Sbjct: 1 MSKSLYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEME-AADASSA 59
Query: 74 VDHLSGFNVANRYLIV 89
V+ L+G++ R L V
Sbjct: 60 VEALNGYSFGGRALKV 75
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I+++ +YD +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 161 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 220
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + +++ V Q QT++ +KF+Q K+D
Sbjct: 221 GKELNGKHIYVGRAQKKVERQTELKRKFEQMKQD 254
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 264 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 320
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 321 MNGRIVATKPLYVALAQR 338
>gi|124507199|ref|XP_001352196.1| mRNA processing protein, putative [Plasmodium falciparum 3D7]
gi|23505226|emb|CAD52006.1| mRNA processing protein, putative [Plasmodium falciparum 3D7]
Length = 761
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAV 74
N L++ N+PF+I+ E+Y+I K G +R +RI D ++G AF Y+D+ A
Sbjct: 7 NYSLWIGNIPFDITENELYEILCKVGVVRNVRIKYDVDKNMSKGFAFCEYKDVETCLLAF 66
Query: 75 DHLSGFNVANRYLIVLY 91
+++G+ + R L V +
Sbjct: 67 KYINGYEIKGRKLKVFW 83
>gi|429864037|gb|ELA38421.1| u1 small nuclear [Colletotrichum gloeosporioides Nara gc5]
Length = 247
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+NLP + E + IFG++ R++R+ + RG AFV Y+ A T
Sbjct: 169 LPP--NKILFVQNLPDDYDIEAVTSIFGRFEGFREVRLVPGR--RGIAFVEYDGEQGAIT 224
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G + + + I + YQ+
Sbjct: 225 AKENTAGMVLGDSHTIKVTYQR 246
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YVRNL +++ D IF +YG + I S+ +G AFVV++ A+ A+D
Sbjct: 9 TVYVRNLEERAKIDQLKDALLQIFSEYGNVLDIVAKSNLRAKGQAFVVFDSPESAQKAID 68
Query: 76 HLSGFNV 82
+ GF +
Sbjct: 69 DVQGFEL 75
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ +++ DIF KYG IR+ + ++ +RG FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + DD+L + KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYG 215
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDHL 77
LYV +L +++ +Y+ F GAI IR+ TR G A+V ++ DA+ A+D +
Sbjct: 13 LYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 78 SGFNVANRYLIVLYYQQ 94
+ + R + +++ Q+
Sbjct: 73 NFDVIKGRPVRIMWSQR 89
>gi|346973867|gb|EGY17319.1| multiple RNA-binding domain-containing protein [Verticillium
dahliae VdLs.17]
Length = 866
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF IS +E+ +F YG +R +R+ + TRG AF + +A+ A+D L
Sbjct: 743 IVVKNLPFEISKKELRALFATYGTLRAVRLPKKMGQSTRGFAFAEFSTPKEAQNAIDALQ 802
Query: 79 GFNVANRYLIVLY 91
++ R L++ Y
Sbjct: 803 HTHLLGRRLVLDY 815
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L+ RNL F++S +++ D F +YG + ++ I +K ++G A+V + A TA
Sbjct: 342 LFARNLAFSVSEDDLRDHFEQYGEVEEVHIPVAKSGTSKGFAYVSFASADAAVTAFQSSD 401
Query: 79 GFNVANRYLIVL 90
G R L VL
Sbjct: 402 GQTFQGRLLHVL 413
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L++ NL F + +Y+IFGKYG I +RI + +T +G +V Y I D
Sbjct: 291 VPSEPSDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIED 350
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
A A + L G + NR + + Y
Sbjct: 351 ATKAFEGLQGEYINNRPVRLDY 372
>gi|406831762|ref|ZP_11091356.1| RNA-binding protein (RRM domain) [Schlesneria paludicola DSM
18645]
Length = 101
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLPF +S ++ +F +YG + +R+ + K T RG AFV + D+ A+ L
Sbjct: 4 IYVGNLPFTVSEPDLMGMFARYGRVSSVRMATDKSTGRPRGFAFVTMNRMEDSDEAIVRL 63
Query: 78 SGFNVANRYLIV 89
+G +++ R ++V
Sbjct: 64 NGSHLSGRTIVV 75
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I+++ +YD +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|407406877|gb|EKF30964.1| RNA-binding protein 5, putative [Trypanosoma cruzi marinkellei]
Length = 249
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKT 72
E R +YV +LP + ++++D+F +YG I RI K TR G F++Y+++ A
Sbjct: 11 EFGRNVYVASLPLDFDDQQLFDLFAQYGPISSARIMRKKGTRESKGYGFILYKNVASAAL 70
Query: 73 AVDHLSG 79
A+ LSG
Sbjct: 71 AISSLSG 77
>gi|310798243|gb|EFQ33136.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 246
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+NLP + + + IFG++ R++R+ + RG AFV Y+ A T
Sbjct: 168 LPP--NKILFVQNLPEDYDIDAVTSIFGRFEGFREVRLVPGR--RGIAFVEYDGEQGAIT 223
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G + + Y I + YQ+
Sbjct: 224 AKENTAGMVLGDTYTIKVTYQR 245
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YVRNL +++ D IF +YG + I ++ +G AFVV++D A+ A++
Sbjct: 9 TVYVRNLEERAKVDQLKDALLQIFSEYGNVIDIVAKTNLKAKGQAFVVFDDPEAARKAIE 68
Query: 76 HLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ GF + + + L +T+ D+E ++ ++ ++ KDK
Sbjct: 69 EVQGFELFEKPM-QLSLARTRSDATVKASGNDEEF-ELHKRRRLAEKDK 115
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ SS +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDSSGRSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDELAKMQ 114
G V+ R L Q Q ++ ++F+Q K+ D L++ Q
Sbjct: 253 GKEVSGRLLYASRAQKRVERQNELKRRFEQMKQ-DRLSRYQ 292
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETYEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELSGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI-GSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I E + F +G I ++ +RG FV + +A AV ++G
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSRGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIV 89
VA + L V
Sbjct: 356 IIVATKPLYV 365
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I+++ +YD +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F ++G ++ +++ S+ +RG FV +E +A+ AVDH++
Sbjct: 256 VYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMN 315
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDE 109
G V + L V Q Q+++ ++F+Q K++ +
Sbjct: 316 GKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQ 351
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I+ E + ++F YG I ++ + S ++G FV + +A AV ++G
Sbjct: 359 LYVKNLDDSINDERLKEVFSAYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNG 418
Query: 80 FNVANRYLIVLYYQQTKMSK 99
V + L V Q+ + K
Sbjct: 419 RIVGTKPLYVALAQRKEERK 438
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G+I ++ ++ +RG FV +E A+ A++ ++G
Sbjct: 164 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNG 223
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 224 MLLNDRKVFVGHFKSRQ 240
>gi|401429468|ref|XP_003879216.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495466|emb|CBZ30771.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 274
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGT 59
T PL K ++ PEV R L+V NLPF+ ++ + + F + G + +I +G + +RG
Sbjct: 178 GTEPLPKPRSQQVPEVGRKLFVSNLPFDCTNSALRETFQQVGLVERAEIILGRNGKSRGM 237
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
VV + +A+ A+ G +ANR + V
Sbjct: 238 GIVVMKSEDEAQIAIAEFDGIEMANRAMNV 267
>gi|339899270|ref|XP_003392812.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|389594783|ref|XP_003722614.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|398023283|ref|XP_003864803.1| RNA-binding protein, putative [Leishmania donovani]
gi|321398747|emb|CBZ09015.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|322503039|emb|CBZ38123.1| RNA-binding protein, putative [Leishmania donovani]
gi|323363842|emb|CBZ12848.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 274
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGT 59
T PL K ++ PEV R L+V NLPF+ ++ + + F + G + +I +G + +RG
Sbjct: 178 GTEPLPKPRSQQVPEVGRKLFVSNLPFDCTNSALRETFQQVGLVERAEIILGRNGKSRGM 237
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
VV + +A+ A+ G +ANR + V
Sbjct: 238 GIVVMKSEDEAQIAIAEFDGIEMANRAMNV 267
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I++ K+T RG A++ YED AVD+L
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
G ++ +R + V + T+ K D+ +D+ + ++ GV +
Sbjct: 95 GGASIMDRIIRVDH---TRYKPKDDEDMRDNTMGELDVDPGVES 135
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + +++ V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKHIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|317037176|ref|XP_001398705.2| U1 small nuclear ribonucleoprotein usp102 [Aspergillus niger CBS
513.88]
Length = 251
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDT 56
MATI +PP N +YVRNL I E + +IF +YG + +I ++
Sbjct: 1 MATI---TAPTPIPP--NCTVYVRNLEERIKVDQLKEALEEIFSEYGTVLEIVAKTNLKA 55
Query: 57 RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
+G AFVV++ + A A+D ++GF + ++ + VL Y +T+ ++ +DEL
Sbjct: 56 KGQAFVVFDTVEAATRAIDEINGFELFDKPM-VLDYAKTRSDMTVLREGGEDEL 108
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R+LP + + +FG++ +++R+ + +G AFV YE+ A +
Sbjct: 172 LPP--NKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLVPGR--KGIAFVEYENESGAIS 227
Query: 73 AVDHLSGFNV--ANRYLIVLYYQQ 94
A + SG + A + + V Y +Q
Sbjct: 228 AKEATSGMPMGEAGKPIRVTYQRQ 251
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKT 72
E + L+V NL F+ S + +++ F YG ++ +R+ + ++T +G A+V + DI AK
Sbjct: 397 EPSSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKK 456
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A D +G ++A R + L YQ+
Sbjct: 457 AHDEGAGMDIAGR-AVRLDYQR 477
>gi|354545488|emb|CCE42216.1| hypothetical protein CPAR2_807650 [Candida parapsilosis]
Length = 819
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF S +++ ++FG +G ++ +R+ D RG AFV + + + + A+ L
Sbjct: 698 IIIKNLPFETSRKDILELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLLKETENAMKQLE 757
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
G ++ R L++ Y +Q D + + E+ KM +K
Sbjct: 758 GVHLLGRRLVMQYAEQ-------DSEDAEAEIEKMTKK 788
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L++RN+ + + ++ +F KYG + ++ I T +G ++ + + DA A + L
Sbjct: 296 LFIRNISYEATEDDFKHLFEKYGPLEEVHIAVDTRTGKSKGFVYIQFVNTEDAVNAFEAL 355
Query: 78 SGFNVANRYLIVLYYQQTKMSK--KFDQK----KKDDELAK 112
R L +L Q K + +FD K KK EL K
Sbjct: 356 DKQIFQGRLLHILAADQKKSHRLDEFDLKNLPLKKQRELKK 396
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
NLPF + +++ ++FG +G ++ +R+ D RG AFV + + +A+TA+ L G ++
Sbjct: 723 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQLEGVHL 782
Query: 83 ANRYLIVLYYQQ 94
R L++ Y +Q
Sbjct: 783 LGRRLVMQYAEQ 794
>gi|407846286|gb|EKG02503.1| RNA-binding protein 5, putative [Trypanosoma cruzi]
Length = 244
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKT 72
E R +YV +LP + ++++D+F +YG I RI K TR G F++Y+++ A
Sbjct: 11 EFGRNVYVASLPLDFDDQQLFDLFAQYGPISSARIMRKKGTRESKGYGFILYKNVASAAL 70
Query: 73 AVDHLSG 79
A+ LSG
Sbjct: 71 AISSLSG 77
>gi|68468327|ref|XP_721723.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
gi|74680318|sp|Q5AJS6.1|MRD1_CANAL RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
Length = 841
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
NLPF + +++ ++FG +G ++ +R+ D RG AFV + + +A+TA+ L G ++
Sbjct: 723 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQLEGVHL 782
Query: 83 ANRYLIVLYYQQ 94
R L++ Y +Q
Sbjct: 783 LGRRLVMQYAEQ 794
>gi|218885158|ref|YP_002434479.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756112|gb|ACL07011.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 88
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTA 73
+++ LYV NLPF+ S +E+ D+F ++G + +++ S ++T RG FV E DA +A
Sbjct: 1 MSKSLYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEME-AADANSA 59
Query: 74 VDHLSGFNVANRYLIV 89
V+ L+G++ R L V
Sbjct: 60 VEALNGYSFGGRALKV 75
>gi|71659219|ref|XP_821333.1| RNA-binding protein 5 [Trypanosoma cruzi strain CL Brener]
gi|70886710|gb|EAN99482.1| RNA-binding protein 5, putative [Trypanosoma cruzi]
Length = 240
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKT 72
E R +YV +LP + ++++D+F +YG I RI K TR G F++Y+++ A
Sbjct: 11 EFGRNVYVASLPLDFDDQQLFDLFAQYGPISSARIMRKKGTRESKGYGFILYKNVASAAL 70
Query: 73 AVDHLSG 79
A+ LSG
Sbjct: 71 AISSLSG 77
>gi|426193181|gb|EKV43115.1| hypothetical protein AGABI2DRAFT_188163, partial [Agaricus bisporus
var. bisporus H97]
Length = 882
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PPEV L+VRN+PF + +E+ +F +G +R RI DT RGT F + ++ DA
Sbjct: 435 PPEVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDLDTGRSRGTGFACFWNLEDA 494
Query: 71 KTAVDH 76
++
Sbjct: 495 DKVIEQ 500
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIY 68
L P L VRNLPF+I+ +++ +F YG I +I I GS T+G AFV
Sbjct: 234 LAPSHASRLIVRNLPFDITEQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFVWMLSKP 293
Query: 69 DAKTAVDHLSG 79
DA+ A++ +G
Sbjct: 294 DAERAIEGCNG 304
>gi|358387674|gb|EHK25268.1| hypothetical protein TRIVIDRAFT_72404 [Trichoderma virens Gv29-8]
Length = 841
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLP+ + E+++ FGK+G ++++ + +S +G A V++ED +A +A L
Sbjct: 318 LFVRNLPYTTTEEDLHHEFGKFGTLQEVHLPTNASGVRKGFAMVLFEDSSNAVSAFQALD 377
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKK 105
G R L ++ + K +F K
Sbjct: 378 GVTFQGRILHIIPAEAKKSVDEFGMSK 404
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 719 IVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNALK 778
Query: 79 GFNVANRYLIVLY 91
++ R L++ +
Sbjct: 779 DTHLLGRRLVLDF 791
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 23 VRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L G
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAENAMDQLQGV 775
Query: 81 NVANRYLIVLYYQQ 94
++ R L++ Y +Q
Sbjct: 776 HLLGRRLVMQYAEQ 789
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDH 76
+R++ V+N P + EE+ ++F +G I ++ + S GT A + Y D+ A+ A
Sbjct: 487 DRIILVKNFPHGTTREELAELFLPFGKIERLLMPPS----GTIAIIQYRDVPAARGAFTK 542
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
LS R+ + Y + F ++ + DEL
Sbjct: 543 LS----YKRFKEAILYLEKGPKDCFSREPRGDEL 572
>gi|68468570|ref|XP_721604.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
Length = 845
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
NLPF + +++ ++FG +G ++ +R+ D RG AFV + + +A+TA+ L G ++
Sbjct: 723 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQLEGVHL 782
Query: 83 ANRYLIVLYYQQ 94
R L++ Y +Q
Sbjct: 783 LGRRLVMQYAEQ 794
>gi|344246646|gb|EGW02750.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 127
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ S ++G FV +E DA+ AVD ++
Sbjct: 29 IYIKNFGEDMDDERLKDLFGKFGPALNVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMN 88
Query: 79 GFNVANRYLIV-----LYYQQTKMSKKFDQKKKD 107
G + + + V QQT++ +KF+Q K+D
Sbjct: 89 GKELNGKQIYVGRAQKKMEQQTELKRKFEQMKQD 122
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 7 RKGNARLPPEVNRV----LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTA 60
R+G + P+ R + V+NLPF + ++++++F +G ++ +R+ K RG A
Sbjct: 724 RQGGSTNAPKQTRKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVPKKFDKSARGFA 783
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQ 93
FV + +A+ A+D L G ++ R L++ Y Q
Sbjct: 784 FVEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQ 816
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
L++RN+ + + ++ ++FGK+G + ++ I + ++G A+V ++D DA A L
Sbjct: 333 LFLRNILYGSTEDDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQFKDPKDAVEAYIEL 392
Query: 78 SGFNVANRYLIVL 90
R L +L
Sbjct: 393 DKQIFQGRLLHIL 405
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 802
Query: 79 GFNVANRYLIVLYYQQ 94
G ++ R L++ Y +Q
Sbjct: 803 GVHLLGRRLVMQYAEQ 818
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 101
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLP+ ++SE++ ++F +YG + ++ I + ++T RG AFV E+ ++A+D L
Sbjct: 3 IYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAIDAL 62
Query: 78 SGFNVANRYLIV 89
G R L V
Sbjct: 63 DGAEWMKRELRV 74
>gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+V LP++ + EE+ + F K+G I ++ + KDT RG AFV+Y AK A+D L
Sbjct: 257 LFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAMDKL 316
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFD 102
R L +L + MS K D
Sbjct: 317 DKLPFQGRTLHILPAKPRAMSAKQD 341
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDHLS 78
+YV NLP N+ EE+YD+FGKYG I+ I I S+ + + AFV Y D+ DA A++
Sbjct: 13 CIYVGNLPGNVIEEEVYDLFGKYGRIKYIDIKPSRSSSSSYAFVHYYDLKDADYAIERRD 72
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDD 108
G+ L V + + + K+ +KKDD
Sbjct: 73 GYKFDGFRLRVEHSGENRSFGKY--RKKDD 100
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici
IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici
IPO323]
Length = 321
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVD 75
RV+++ N+P+++S E++ DIFG+ G + R+ K+T +G F+ Y D A +AV
Sbjct: 9 RVVFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDADSAASAVR 68
Query: 76 HLSGFNVANRYLIVLY 91
+L+ F + R L V Y
Sbjct: 69 NLNDFELNGRTLRVDY 84
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L+V+NLP +I + + DIF KYG I ++ +S+D ++G FV +E +K A++ L+
Sbjct: 102 LFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLN 161
Query: 79 GFNVANRYLIV 89
G+ VA++ L V
Sbjct: 162 GYTVADKELYV 172
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
LY++NL ++S + + F +G I + I + ++G FV Y++ DAK A++ ++
Sbjct: 193 LYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAMN 252
Query: 79 GFNVANRYLIVLYYQQTK-----MSKKFDQKKKDDEL 110
G + ++ L V Q+ + +F++K+K+ L
Sbjct: 253 GSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQIL 289
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+YV+N+ ++S EE+ D F G I +I ++G FV + +A AV+
Sbjct: 296 IYVKNIDDHVSDEELRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFH 355
Query: 79 GFNVANRYLIVLYYQQ 94
GF + L V Q+
Sbjct: 356 GFMYHGKPLYVALAQR 371
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKT 72
E + VL+V NL ++ + + +++ F +YG I+ +R+ + ++T +G A+V + DI +K
Sbjct: 141 EPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKK 200
Query: 73 AVDHLSGFNVANRYLIVLYYQ 93
A + +G VA R + V + Q
Sbjct: 201 AFEGAAGAEVAGRNIRVDFSQ 221
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
L V N+PF I S+E+ D+F K+G I + R S ++RG AFV + + DA+ A++
Sbjct: 8 TLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDAIEG 67
Query: 77 LSGFNVANRYLIVLYYQQTK 96
+ G R L V + +Q +
Sbjct: 68 MEGQEFQGRDLRVQFAKQRR 87
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDNSGRSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDELAKMQ 114
G V+ R L Q Q ++ +KF+Q K+ D L++ Q
Sbjct: 253 GKEVSGRLLYASRAQKRVERQNELKRKFEQMKQ-DRLSRYQ 292
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ K +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDKHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGSHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|396499673|ref|XP_003845532.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
gi|312222113|emb|CBY02053.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + +YVRNLP++ S+E++ ++F G + +I+ + +RGT V +E DA+TA
Sbjct: 385 EPSNTIYVRNLPWSTSNEDLIELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKEADAETA 444
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ +G+ R L + Y K+ + D + + G T+D+
Sbjct: 445 ISKFTGYQYGGRPLGLTYV-------KYTNQNNGDSMEGTEHTGGGLTQDQ 488
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTA 73
R +YV NLP+N+ +++ D+F G++ + + + D R G+ V +E DA+ A
Sbjct: 219 RQVYVANLPYNVGWQDLKDLFRQAAHTGSVIRADVHIAPDGRPKGSGIVAFETPEDARNA 278
Query: 74 VDHLSGFNVANRYLIV 89
++ +G++ R L V
Sbjct: 279 INQFNGYDWQGRNLEV 294
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 748 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 807
Query: 79 GFNVANRYLIVLYYQ 93
G ++ R L++ Y Q
Sbjct: 808 GVHLLGRRLVIQYAQ 822
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L V+NLPF S ++ +FG YG +R +R+ D TRG AF + +A+ A++ L
Sbjct: 717 LIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHSTRGFAFADFITAREAENALEALK 776
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + + ++E+ KMQ+K G
Sbjct: 777 DTHLLGRRLVIDFASEETVD-------AEEEIEKMQKKVG 809
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--------GTAFVVYEDIYDAK 71
L+VRNL F+ +S+ + +IF R+ + D + G F+ + A+
Sbjct: 611 TLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQAQ 670
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
A+ + G+ + N L+V K + ++K+K+D K+ K
Sbjct: 671 AAIKAMDGYTLDNHKLLVKASH--KGADAAEEKRKEDRAKKLAGK 713
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI-----GSSKDTRGTAFVVYEDIYDAKTAVD 75
L+VRNLP++ + +++ F +YG + +I + G+SK G V Y D A A
Sbjct: 313 LFVRNLPYSATEDDLRKHFEQYGTLEEIHLPVDAKGASK---GFVLVQYTDPNAAAEAYH 369
Query: 76 HLSGFNVANRYLIVL 90
++ G R L +L
Sbjct: 370 NVDGEPFQGRLLHIL 384
>gi|328869164|gb|EGG17542.1| U2 small nuclear ribonucleoprotein B [Dictyostelium fasciculatum]
Length = 241
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 18 NRVLYVRNLPFNISS----EEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N+ +YV N+ +S E++Y +F KYG I +I + +G AF+V++DI A A
Sbjct: 26 NQTIYVNNINEKLSQKKLKEQLYGLFSKYGTILEIISSKRQKMKGQAFIVFQDITAASNA 85
Query: 74 VDHLSGFNVANRYLIVLYYQQ-----TKMSKKFDQKKKDDELAKMQEKYGVSTKD 123
+ ++GF+ +R + V Y + +K+ + +KK++ E QEK +D
Sbjct: 86 LREMNGFSFFDRNINVQYSKNKSDAVSKLDGTYVEKKRERETE--QEKRKAKKQD 138
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
PP NR+L+V NLP N + +F ++ + + + +++ +G AFV Y+D + A
Sbjct: 164 PP--NRILFVENLPDNCQEMMIQMLFSQFPGFQSVNMTTAR--KGVAFVEYDDDIKSGLA 219
Query: 74 VDHLSGFNV-ANRYLIVLYYQQ 94
+ HL GF V ++R +++ + Q
Sbjct: 220 MSHLQGFKVTSDRPMVISFAAQ 241
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 28/132 (21%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F ++G + +++ S+ +RG F+ +E +A+ AVDH++
Sbjct: 193 IYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSNGQSRGFGFINFEKHEEAQKAVDHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKK---------------------DDELAK 112
G V+ + L V Q Q ++ ++F+Q K+ DD L +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDRLKE 312
Query: 113 MQEKYGVSTKDK 124
+ YGV T K
Sbjct: 313 VFSTYGVITSAK 324
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-SKDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I+ + + ++F YG I ++ + S ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSINDDRLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSK 99
V + L V Q+ + K
Sbjct: 356 RIVGTKPLYVALAQRKEERK 375
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G+I ++ ++ +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRQ 177
>gi|255965740|gb|ACU45165.1| G-strand telomere-binding protein [Prorocentrum minimum]
Length = 199
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAK 71
P + R+LYV NLPF S +++ D+F + G + ++ I D R G A V+YE A+
Sbjct: 116 PDDEGRLLYVGNLPFRCSWQDVKDVFKEAGPVIRVDIAEGPDGRSKGYATVLYETEDQAQ 175
Query: 72 TAVDHLSGFNVANRYLIV 89
A+D L+G + R L V
Sbjct: 176 GAIDRLNGRDFQGRSLTV 193
>gi|189219581|ref|YP_001940222.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
gi|189186439|gb|ACD83624.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
Length = 117
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NLP+N++ ++++IF K G I+ + I S T+G FV D+ A+ A L
Sbjct: 33 LYVGNLPYNLTDSDLFEIFAKIGPIKNVEIVRDRKSNRTKGFGFVEMADLDSARKAATVL 92
Query: 78 SGFNVANRYLIV 89
+G + R +IV
Sbjct: 93 NGIEIMGRRIIV 104
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF ++++++F +G ++ +R+ K TRG AFV + +A+ A++ L
Sbjct: 753 IVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKSTRGFAFVEFLLPKEAENAMEQLQ 812
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQ 114
G ++ R L++ + +Q +M+KK + ELA ++
Sbjct: 813 GVHLLGRRLVMQHAEQEPQDAEEQIARMTKKVRSQVATQELAALR 857
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L V+NLPF S ++ +FG YG +R +R+ D TRG AF + +A+ A++ L
Sbjct: 721 LIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHSTRGFAFADFITAREAENALEALK 780
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + + ++E+ KMQ+K G
Sbjct: 781 DTHLLGRRLVIDFASEETVD-------AEEEIEKMQKKVG 813
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI-----GSSKDTRGTAFVVYEDIYDAKTAVD 75
L+VRNLP++ + +++ F +YGA+ +I + G+SK G V Y D A A
Sbjct: 317 LFVRNLPYSATEDDLRKHFEQYGALEEIHLPVDAKGASK---GFVLVQYTDPNAAAEAYH 373
Query: 76 HLSGFNVANRYLIVL 90
++ G R L +L
Sbjct: 374 NVDGEPFQGRLLHIL 388
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--------GTAFVVYEDIYDAK 71
L+VRNL F+ +S+ + ++F R+ + D + G F+ + A+
Sbjct: 615 TLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQAQ 674
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
A+ + G+ + N L+V K + ++K+K+D K+ K
Sbjct: 675 AAIKAMDGYTLDNHKLLVKASH--KGADAAEEKRKEDRAKKLAGK 717
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAK 71
P + +YV N+P ++ +E+ IFG+YG I + S +G AFV +EDI DA+
Sbjct: 2 PRSSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAE 61
Query: 72 TAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ D L G+ + R L + + T KK DE+ + + ++ DK
Sbjct: 62 ESFDRLQGYRIGKRSLRLEFATGT--------KKTPDEMRTVTRRGRSNSPDK 106
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 5 PLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVY 64
PL+ R+ +R +YV NLP +I E+ D+F KYG I I + G AFV +
Sbjct: 94 PLKSKKRRMSRHSSRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEF 153
Query: 65 EDIYDAKTAVDHLSGFN 81
ED+ DA+ A+ G++
Sbjct: 154 EDVQDAEDAIRGRDGYD 170
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L++ NL FN + ++++F K+G I +R+ + +T +G +V Y +I D
Sbjct: 253 IPSEPSETLFLGNLSFNADRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDD 312
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
AK A++ L G + NR + + Y
Sbjct: 313 AKKALEALQGEYIDNRPVRLDY 334
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F ++G + +++ +S +RG FV +E +A+ AVDH++
Sbjct: 193 IYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDE 109
G V+ + L V Q Q ++ ++F+Q K+D +
Sbjct: 253 GKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQ 288
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +IS E++ +F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSISDEKLRTVFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ +Q
Sbjct: 356 CIVGTKPLYVALAQRKEERKAILTNQYMQRLSTVQ 390
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I S+ +YD F +G I ++ + +RG FV +E A+ A+ ++G
Sbjct: 101 VFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETNEAAQQAISTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSHR 177
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRMERQNELKRRFEQMKQD 286
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|428174763|gb|EKX43657.1| hypothetical protein GUITHDRAFT_110456 [Guillardia theta CCMP2712]
Length = 249
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
++++VR++P + + ++F +G + + IGS+ T GTA +V E +A+ H
Sbjct: 114 AKKMVFVRHVPKERALDTCLELFSAHGKVMAVSIGSTPSTYGTAHIVMESRKSVISAIRH 173
Query: 77 LSGFNVANRYLIV 89
L+G VA R L+V
Sbjct: 174 LNGLQVAGRTLLV 186
>gi|300120924|emb|CBK21166.2| unnamed protein product [Blastocystis hominis]
Length = 361
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTA 60
IP+ K + +P + R ++V+NLP+N++ EE+ +F ++G I ++RI DT +G
Sbjct: 228 IPMSKKDVMVPIDC-RCIFVKNLPYNVTEEEIRSVFMRFGKISEVRIPVWNDTGRQKGLC 286
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
+V Y K AV + R L++
Sbjct: 287 YVDYLTNQSVKLAVAQSGAVEMKGRKLLI 315
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
++++ LP++ + E + + G+ G I++IRI + +D+ RG AFV + + A+ A+
Sbjct: 148 VHLQGLPYDTTEETIREFLGECGTIKEIRIPTYQDSGRCRGYAFVSFTNQAGAQAALKKN 207
Query: 78 SGFNVANRYLIVLY 91
+ + RY+ + Y
Sbjct: 208 KEY-IGERYITISY 220
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L+++NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 150 GQETMPP--NNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKP--GIAFVEYEDDV 205
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
A A+ L GF + + +V+ +
Sbjct: 206 QASIAMQPLQGFKITPQNPMVISF 229
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|403417653|emb|CCM04353.1| predicted protein [Fibroporia radiculosa]
Length = 941
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDA 70
PPE L+VRN+PF + +E+ +F +G +R RI + +RGT FV + + DA
Sbjct: 475 PPETGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITMDHEIGRSRGTGFVCFWNKADA 534
Query: 71 KTAVDH---LSGFNVANRYLI 88
A++ L V N+ +
Sbjct: 535 DKAIEQSELLRAETVTNKVAV 555
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 15 PEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-------SKDTR-------- 57
P NR L VRNLPF+I+ +++ +F YG I I I S +D R
Sbjct: 236 PAPNRASRLIVRNLPFDITEQDLRAVFLPYGPIYSIDIPSVEAPKPEEEDVRPSAAPRKK 295
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNV----ANRYLIVLYYQQTKMSKKFDQK 104
G AFV DA+ A++ +G V A R +V Q+ K ++ +QK
Sbjct: 296 GFAFVWMLSRMDAERAMEQCNGIAVEAGMAER--LVSDKQKRKKQRREEQK 344
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ +T +G F+ + D DAK A++ L
Sbjct: 258 LYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQL 317
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 318 NGFELAGRPMKV 329
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ S ++G FV +E DA+ AVD ++
Sbjct: 238 VYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGKSKGFGFVSFERHEDARKAVDEMN 297
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 298 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 331
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 146 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 205
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 206 MLLNDRKVFVGRFKSRK 222
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
>gi|302662086|ref|XP_003022702.1| hypothetical protein TRV_03163 [Trichophyton verrucosum HKI 0517]
gi|291186662|gb|EFE42084.1| hypothetical protein TRV_03163 [Trichophyton verrucosum HKI 0517]
Length = 267
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 22 YVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
YVRNL I E++ +IF +YG+I +I ++ +G AF+V++++ A A+D +
Sbjct: 29 YVRNLEERIKVEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVDSATRAIDEV 88
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
+GF + + + VL Y +TK ++ D+EL
Sbjct: 89 NGFELFEKPM-VLEYAKTKSDATVMREGGDEEL 120
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP ++ + IFG++ +++R+ + +G AFV YE+ A +
Sbjct: 188 LPP--NKILFLRELPETYDADGLSAIFGRFPGFKEVRMVPGR--KGIAFVEYENESGAIS 243
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 244 AKEATSGMALGENEKPIKVTYQR 266
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 67 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 126
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 127 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 160
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFV 62
L+KGNA LYV +L FNI+ E + IF +G I I++ +T +G F+
Sbjct: 241 LQKGNAG-----PMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFI 295
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
+ D AK A+D L+GF +A R + V + + + DEL + G + +
Sbjct: 296 TFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGR 355
>gi|92429673|gb|ABE77206.1| unknown [Sorghum bicolor]
Length = 240
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTA 73
+RV+YV N+PF+ S +E++D G +R +R+ + T RG AFV Y D A++A
Sbjct: 17 CSRVVYVGNIPFHASEKEVHDACELIGPVRSLRLAADPGTGKRRGYAFVEYPDDETARSA 76
Query: 74 VDHLSGFNVANRYLIV 89
+L G + R L V
Sbjct: 77 CRNLHGHALRGRELRV 92
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F +G + +++ +S +RG FV +E +A+ AVDH++
Sbjct: 193 IYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKDDE 109
G V+ + L V Q Q ++ ++F+Q K+D +
Sbjct: 253 GKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQ 288
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +IS E++ +F YG I ++ + D ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSISDEKLRTVFSPYGVITSAKVMTEGDHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ +Q
Sbjct: 356 CIVGTKPLYVALAQRKEERKAILTNQYMKRLSTVQ 390
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I S+ +YD F +G I ++ + +RG FV +E A+ A+ ++G
Sbjct: 101 VFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETNEAAQQAIGTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSQR 177
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
L+VRNLP+ + EE+ + F K+G I ++ + +K++RG AFV+Y+ AK A++ L
Sbjct: 214 LFVRNLPYTATEEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEEL 273
Query: 78 SGFNVANRYLIVL 90
+ R L +L
Sbjct: 274 DNKDFQGRLLHIL 286
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 20 VLYVRNLPFNISSEEMYDIFG---KYGAIRQIRIGSSKDTR----GTAFVVYEDIYDAKT 72
VLYV+NL FN + E + K G I ++I + +R G FV ++ + A +
Sbjct: 526 VLYVKNLNFNTTDESLRKHLTELVKQGKILSVKIKKNGKSRPRSSGYGFVEFDSVETATS 585
Query: 73 AVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
L G +R+ ++L + + K + F+ K+ EL ++ +G
Sbjct: 586 VYRDLQGTTFLDRHKLILRFSENK--RTFEATKQ--ELRQLCSPFG 627
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 360 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 419
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 420 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 453
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 268 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 327
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 328 MLLNDRKVFVGRFKSRK 344
>gi|308459496|ref|XP_003092067.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
gi|308254399|gb|EFO98351.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
Length = 116
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
NR +YV NLPF+ + EE++D+F G I+ I I +K G AFV ++ A AV +L
Sbjct: 16 NRQVYVGNLPFDATEEELHDVFSVMGPIKNIWI--AKRPPGFAFVTFKRTVHAYDAVKYL 73
Query: 78 SGFNVAN 84
+G + N
Sbjct: 74 NGKKICN 80
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 129 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 188
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 189 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 222
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 37 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 96
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 97 MLLNDRKVFVGRFKSRK 113
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L+++NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 150 GQETMPP--NNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKP--GIAFVEYEDDV 205
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
A A+ L GF + + +V+ +
Sbjct: 206 QASIAMQPLQGFKITPQNPMVISF 229
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 128 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 187
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 188 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 221
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 36 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 95
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 96 MLLNDRKVFVGRFKSRK 112
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+YV NLP ++ ++ D+F KYG IR I + +++ T AFV +ED DA+ AV +G+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVYGRNGY 65
Query: 81 NVANRYLIVLYYQQT 95
+ + L V Y + +
Sbjct: 66 GLGDSKLRVEYPRSS 80
>gi|328852591|gb|EGG01736.1| hypothetical protein MELLADRAFT_23270 [Melampsora larici-populina
98AG31]
Length = 510
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L V+N+PF S +E+ ++FG +G ++ +R+ D TRG F+ Y +A+ A+ L
Sbjct: 421 LLVKNVPFETSKQELRELFGSFGKLKSVRLPKKLDRKTRGFGFIEYTTKKEAEEAMKSLK 480
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R+L++ Y KD+++ +++ K G
Sbjct: 481 HTHLLGRHLVISYAND-----------KDEDIEQLRAKSG 509
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L++RNLPF++ E++ +F YGA+ Q+ I +++ +G A+V +E DA A L
Sbjct: 18 LFLRNLPFSLLEEDLMSLFSTYGAVSQVHIPLNRERKQKGVAYVSFERSSDALEAFKQLD 77
Query: 79 GFNVANRYLIVL 90
+ R L +L
Sbjct: 78 QRDFQGRLLHIL 89
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L+++NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 150 GQEAMPP--NNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKP--GIAFVEYEDDV 205
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
A A+ L GF + + +V+ +
Sbjct: 206 QASIAMQPLQGFKITPQNPMVISF 229
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 283 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 342
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 343 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 376
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 191 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 250
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 251 MLLNDRKVFVGRFKSRK 267
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 156 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 215
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 216 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 249
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 64 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 123
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 124 MLLNDRKVFVGRFKSRK 140
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L +NI+ E + IF +G + I++ +T +G F+ Y + DAK A++HL
Sbjct: 240 LYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHL 299
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 300 NGFEIAGRPMKV 311
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 134 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 193
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 194 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 227
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 42 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 101
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 102 MLLNDRKVFVGRFKSRK 118
>gi|154344761|ref|XP_001568322.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065659|emb|CAM43430.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 275
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 5 PLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFV 62
PL K ++ PEV R L+V NLPF+ ++ + + F + G + +I +G + +RG V
Sbjct: 182 PLPKPRSQQVPEVGRKLFVSNLPFDCTNSALRETFQQVGLVERAEIILGRNGKSRGMGIV 241
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIV 89
V + +A+ A+ G +ANR + V
Sbjct: 242 VMKSEDEAQIAIAEFDGIEMANRAMNV 268
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 122 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 181
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 182 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 215
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 30 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 89
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 90 MLLNDRKVFVGRFKSRK 106
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 148 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 207
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 208 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 241
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 56 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 115
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 116 MLLNDRKVSVGRFKSRK 132
>gi|408388514|gb|EKJ68198.1| hypothetical protein FPSE_11665 [Fusarium pseudograminearum CS3096]
Length = 855
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 733 IIIKNLPFQTTKKDIRSLFGTYGQLRSVRLPKKADYTPRGFAFADFVTPREAENALNSLR 792
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + D ++E+AKMQ+K G
Sbjct: 793 DTHLLGRKLVLDFAEA-------DAVDAEEEIAKMQKKVG 825
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N + E++ ++F KYG IR+ + ++ +RG FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D++L ++ KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYG 215
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N + E++ ++F KYG IR+ + ++ +RG FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D++L ++ KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYG 215
>gi|186521407|ref|NP_001119193.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332003956|gb|AED91339.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 690
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+V LP++ + EE+ + F K+G I ++ + KDT RG AFV+Y AK A+D L
Sbjct: 229 LFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKMAMDKL 288
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
R L +L + MS K
Sbjct: 289 DKLPFQGRTLHILPAKPRAMSAK 311
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 213 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 272
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 273 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 306
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 121 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 180
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 181 MLLNDRKVFVGRFKSRK 197
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|207346289|gb|EDZ72828.1| YDR432Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 322
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N L+VR P ++ E+ +IFG +G +++++I G AFV +E+ A A++ +
Sbjct: 32 NTRLFVRPFPLDVQESELNEIFGPFGPMKEVKI-----LNGFAFVEFEEAESAAKAIEEV 86
Query: 78 SGFNVANRYLIVLY 91
G + AN+ L V+Y
Sbjct: 87 HGKSFANQPLEVVY 100
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 122 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 181
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 182 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 215
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 30 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 89
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 90 MLLNDRKVFVGRFKSRK 106
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 229 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 288
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 289 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 322
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 137 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 196
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 197 MLLNDRKVFVGRFKSRK 213
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 122 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 181
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 182 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 215
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 30 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 89
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 90 MLLNDRKVFVGRFKSRK 106
>gi|93003136|tpd|FAA00151.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 189
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDH 76
+YV NLPF++++ +++ IFGK G + ++ + +K+ R G AFV+Y DA AV
Sbjct: 8 TVYVSNLPFSLTNNDLHKIFGKMGKVVKVTVTKNKENRESTGLAFVLYLKKEDAMKAVHI 67
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKK 105
+ G + R L + +K+F ++K
Sbjct: 68 MDGKQLLGRKLKCSIAKDNGRTKEFIKRK 96
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V+NL NI S+ +Y+IF +GAI ++ S+ ++G FV YE A+ A++ L+
Sbjct: 125 LFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAINGLN 184
Query: 79 GFNVANRYLIV 89
G NR + V
Sbjct: 185 GMLANNRKMFV 195
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 161 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 220
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 221 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 254
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ D+F KYG IR+ + S +RG FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDSGKSRGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q Q ++ +KF+Q K+D
Sbjct: 253 GKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDHL 77
LYV +L +++ +Y+ F GAI IR+ TR G A+V ++ DA+ A+D +
Sbjct: 13 LYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 78 SGFNVANRYLIVLYYQQ 94
+ + R + +++ Q+
Sbjct: 73 NFDVIKGRPVRIMWSQR 89
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 239 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 298
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 299 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 332
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 147 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 206
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 207 MLLNDRKVFVGRFKSRK 223
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K TRG AFV + +A+ A+D L
Sbjct: 742 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSTRGFAFVEFLLPKEAEDAMDQLQ 801
Query: 79 GFNVANRYLIVLY 91
G ++ R L++ Y
Sbjct: 802 GVHLLGRRLVMQY 814
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 205 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 264
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 265 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 298
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 113 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNG 172
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 173 MLLNDRKVFVGHFKSRR 189
>gi|361128764|gb|EHL00690.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 410
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 5 PLRKGNARLPP-----------EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS 53
P G + PP E + ++YVRNLP++ S+E++ ++F G + Q I
Sbjct: 285 PSAGGASSAPPNPFTDFATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYE 344
Query: 54 KD--TRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
+ +RGT V ++ +A+TA++ SG+ R L + +
Sbjct: 345 PNGRSRGTGVVRFDSAENAETAIEKFSGYQYGGRPLGLTF 384
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 21 LYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV NLP+ + +++ D+F + G + + +G +G+ VV+E DA+ A+
Sbjct: 146 IYVSNLPYTVGWQDLKDLFRQATRNGTVIRADVHVGPDGRPKGSGIVVFESPDDARNAIQ 205
Query: 76 HLSGFNVANRYLIV 89
+G++ R L V
Sbjct: 206 QFNGYDWQGRPLEV 219
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAV 74
++VL+V N+ FN + + +++ FG++G I +R+ + ++T +G +V + + +AK+A
Sbjct: 489 SKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAF 548
Query: 75 DHLSGFNVANRYLIVLYYQ 93
+ L+G ++A R + + + Q
Sbjct: 549 NALNGKDIAGRNIRLDFSQ 567
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + ++F ++G + +++ SS +RG FV +E +A+ AV H++
Sbjct: 193 IYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGHSRGFGFVNFETHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQD 286
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQHAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ + + V +++ +
Sbjct: 161 MLLNDHKVFVGHFKSRR 177
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I E++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 168 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 227
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 228 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 261
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 76 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 135
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 136 MLLNDRKVFVGRFKSRK 152
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|296816707|ref|XP_002848690.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
gi|238839143|gb|EEQ28805.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
Length = 276
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
G V R L V + + K+ D + +D LA + E
Sbjct: 95 GGATVLGRVLRVDHVRY----KRRDDEGTEDNLANVDE 128
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ +T +G F+ + D DAK A++ L
Sbjct: 146 LYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQL 205
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 206 NGFELAGRPMKV 217
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N +++ E + ++FGKYG +++ + + ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQD 286
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A+D ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F D+ L +M KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYG 215
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|399217955|emb|CCF74842.1| unnamed protein product [Babesia microti strain RI]
Length = 252
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAK 71
PP N L+V ++P + + +Y+ F K+G I R+ K+ RG FV Y++ +
Sbjct: 161 PPGNN--LFVFHIPCTWNDQNLYEHFCKFGNIISSRVQCDKNGRNRGFGFVSYDNPESSA 218
Query: 72 TAVDHLSGFNVANRYLIVL 90
A+ H++GFN ++YL V+
Sbjct: 219 EAIKHMNGFNTGDKYLKVM 237
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L++ NL FN + + ++F K+G I +RI + +T +G +V Y ++ D
Sbjct: 259 VPSEPSETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVED 318
Query: 70 AKTAVDHLSGFNVANR 85
AK A+D L G + NR
Sbjct: 319 AKKALDALQGEYIDNR 334
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDHL 77
LYV +L +++ +Y+ F G I IRI K TR G A+V Y+ D++ A+D +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALDTM 72
Query: 78 SGFNVANRYLIVLYYQQ 94
+ + + + +++ Q+
Sbjct: 73 NFDVIKGKPVRIMWSQR 89
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 197 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 256
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 257 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 290
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDHL 77
LYV +L +++ +Y+ F G I IRI K TR G A+V Y+ DAK A++ L
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETL 72
Query: 78 SGFNVANRYLIVLYYQQ 94
+ + R + +++ Q+
Sbjct: 73 NFDVIKGRPVRIMWSQR 89
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 105 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 164
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 165 MLLNDRKVFVGRFKSRK 181
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N +++ E + ++FGKYG +++ + + ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQD 286
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A+D ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F D+ L +M KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYG 215
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
++V N+PF + E++++IF + G I IR+ +T +G AFV YED A +A+ +L
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNL 70
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
+G++ R L V + + + +++ E A QE+
Sbjct: 71 NGYDCNGRLLRVNFSNNSSLGA----EQQRGEKAPQQER 105
>gi|198416260|ref|XP_002128081.1| PREDICTED: similar to zinc finger protein [Ciona intestinalis]
Length = 211
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDH 76
+YV NLPF++++ +++ IFGK G + ++ + +K+ R G AFV+Y DA AV
Sbjct: 11 TVYVSNLPFSLTNNDLHKIFGKMGKVAKVTVTKNKEDRESTGLAFVLYLKKEDAMKAVHI 70
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKKK 106
+ G + R L + +K+F ++K+
Sbjct: 71 MDGKQLLGRKLKCSIAKDNGRTKEFIKRKE 100
>gi|358378115|gb|EHK15797.1| hypothetical protein TRIVIDRAFT_195742 [Trichoderma virens Gv29-8]
Length = 242
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+++N+P + + +FG++ R+IR+ + RG AFV YE+ A T
Sbjct: 165 LPP--NKILFIQNVPDEYDVDALNAVFGRFDGFREIRLVPGR--RGIAFVEYENEQGAIT 220
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G + ++ + V Y +Q
Sbjct: 221 AKENTAGMALGDKPIKVTYQRQ 242
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
++++NL NI ++ MYD F +G I ++ + ++G FV +E A ++D ++
Sbjct: 101 VFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVN 160
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
G + + L Y K F + DD+L +M EKYG T K
Sbjct: 161 GMLLNGKKLFTNVY-----VKNFGEDMTDDKLKEMFEKYGTITSHK 201
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+N +++ +++ ++F KYG I ++ I +RG FV +ED A+ AV L+
Sbjct: 173 VYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELN 232
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
G VA + + Q K ++ + K+K ++L
Sbjct: 233 GKEVAEGKCMYVGRAQKKAERQQELKRKFEQL 264
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + D+F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L++ NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 146 GQDTMPP--NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKP--GIAFVEYEDDV 201
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
+ A+ L GF + R +V+ +
Sbjct: 202 QSSMAMQALQGFKITPRNPMVVSF 225
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 813
Query: 79 GFNVANRYLIVLYYQQ 94
G ++ R L++ + +Q
Sbjct: 814 GVHLLGRRLVMEFVEQ 829
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF S ++++ +F + ++ +R+ D RG AFV + + +A+T +D L
Sbjct: 16 IIVKNLPFEASRDDVFQLFSSFAHLKSVRVPKKFDRSARGFAFVEFNTVKEAETVMDQLQ 75
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQE 115
G ++ R L++ + ++ ++M+KK ++ +LA ++E
Sbjct: 76 GVHLLGRRLVLDFAEKNADNAEEEISRMTKKARKQVNATKLAGLRE 121
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 4 IPLRKGNAR------LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT- 56
P ++ N R P + + L+V N+ F+ + + + ++F +YG+I +R+ + ++T
Sbjct: 340 TPQQRSNDRQKQYGDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETG 399
Query: 57 --RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
+G +V + I +AK+A+++L+G ++A R + + Y
Sbjct: 400 APKGFGYVEFSSIEEAKSAMENLTGVDIAGRPIRLDY 436
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAK 71
P L+V NL +N+ E + F ++GAI+ +R+ + +D ++G +V +E DA
Sbjct: 249 PAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAA 308
Query: 72 TAVDHLSGFNVANRYLIV 89
A++ G+ + NR L V
Sbjct: 309 KALEARHGYTLDNRELRV 326
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P + + L++ NL FN +++Y++F K+G I +R+ + +T +G +V Y ++ D
Sbjct: 273 VPSQPSDTLFLGNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVND 332
Query: 70 AKTAVDHLSGFNVANR 85
A++A+D L G + NR
Sbjct: 333 AQSALDALQGEYIDNR 348
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I + +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|29150367|gb|AAO72376.1| putative RNA binding ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 975
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
+ VRNLPF I+ +E+ DIF G I + I D ++G AFV + DA+ A+ ++
Sbjct: 320 VIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSDDGASKGFAFVSFTRKQDAENAIKNV 379
Query: 78 SGFNVANRYLIVLYYQQTKM-SKKFDQKKKDDELAKMQEK 116
+G VA R + V + K+ + KDDELA + ++
Sbjct: 380 NGKVVAKRTVAVDWAVPKKVYTVAAKSSTKDDELANVSDR 419
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQ---IRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
++V NLP+ S ++ +F + G +R+ + S+ +RG FV + + DA+ ++
Sbjct: 35 TVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQQ 94
Query: 77 LSGFNVANRYLIV 89
GF+VA R + V
Sbjct: 95 KDGFSVAGRKIRV 107
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQ---IRIGSSKDTRGTAFVVY 64
++R L++ NLPF++S+EE+ + F +G + + +K RGT F+ +
Sbjct: 536 LDRTLFISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKF 586
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDA 70
PP N LY+RNL + S+++ +F KYG IR I I +++ RG +V +EDI DA
Sbjct: 9 PP--NTSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQFEDIRDA 66
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
+ A+ H S + R L + Y
Sbjct: 67 EDALYHESHARLHGRELDIQY 87
>gi|302505870|ref|XP_003014892.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291178463|gb|EFE34252.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 312
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
G V R L V + + K+ D + +D L + E V D+
Sbjct: 95 GGATVLGRVLRVDHVRY----KRRDDEGTEDNLVNVDENGEVMESDR 137
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|321474055|gb|EFX85021.1| hypothetical protein DAPPUDRAFT_194198 [Daphnia pulex]
Length = 247
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+++ LP+ +S ++ IF +YG + I + K T +G F+ YED AVD+L
Sbjct: 38 IFIGGLPYELSEGDIICIFSQYGEVANINLVRDKVTGKSKGFCFLCYEDQRSTILAVDNL 97
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
+ V R L V + +Q K+ K D K +D L +QE G
Sbjct: 98 NSIKVCGRTLRVDHVEQYKIPKDPD-KLDEDALRILQEGCG 137
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L++ NL FN + + ++F KYG I +RI + +T +G +V Y ++ D
Sbjct: 256 VPSEPSETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVED 315
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
AK A++ L G + NR + + Y
Sbjct: 316 AKKALEGLQGEYIDNRPVRLDY 337
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 764 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 823
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ E+A + K G
Sbjct: 824 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATSEMAALTNKGG 872
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N+ +Y+RNL + +E+ Y+ F ++G I + + RG AF+ +EDI
Sbjct: 36 VPP--NQTIYIRNLDEKVKKQELRQSLYEAFSQFGRIVDVVALKTTRMRGQAFIAFEDIA 93
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
A A+ L GF N+ +++ Y
Sbjct: 94 SATNALRGLQGFLFYNKPMVIQY 116
>gi|115455989|ref|NP_001051595.1| Os03g0801800 [Oryza sativa Japonica Group]
gi|108711601|gb|ABF99396.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550066|dbj|BAF13509.1| Os03g0801800 [Oryza sativa Japonica Group]
gi|215695092|dbj|BAG90283.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625982|gb|EEE60114.1| hypothetical protein OsJ_12988 [Oryza sativa Japonica Group]
Length = 959
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
+ VRNLPF I+ +E+ DIF G I + I D ++G AFV + DA+ A+ ++
Sbjct: 304 VIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSDDGASKGFAFVSFTRKQDAENAIKNV 363
Query: 78 SGFNVANRYLIVLYYQQTKM-SKKFDQKKKDDELAKMQEK 116
+G VA R + V + K+ + KDDELA + ++
Sbjct: 364 NGKVVAKRTVAVDWAVPKKVYTVAAKSSTKDDELANVSDR 403
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQ---IRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
++V NLP+ S ++ +F + G +R+ + S+ +RG FV + + DA+ ++
Sbjct: 35 TVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQQ 94
Query: 77 LSGFNVANRYLIV 89
GF+VA R + V
Sbjct: 95 KDGFSVAGRKIRV 107
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQ---IRIGSSKDTRGTAFVVY 64
++R L++ NLPF++S+EE+ + F +G + + +K RGT F+ +
Sbjct: 520 LDRTLFISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKF 570
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ +IF KYG IR+ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NL + +++ D+F K+G + + + +K++RG FV +ED+ DA+ AV L
Sbjct: 67 LYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVKEL 126
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
+ V R + V + ++ + +K
Sbjct: 127 NNQEVQGRKMRVEHAKRKRGHEK 149
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V+NL NI S+ +Y+IF +GAI ++ S+ ++G FV YE A+ A++ L+
Sbjct: 92 LFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAINGLN 151
Query: 79 GFNVANRYLIV 89
G NR + V
Sbjct: 152 GMLANNRKMFV 162
>gi|195486017|ref|XP_002091330.1| GE12305 [Drosophila yakuba]
gi|194177431|gb|EDW91042.1| GE12305 [Drosophila yakuba]
Length = 181
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFV 62
+R AR P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+
Sbjct: 1 MRMHKAREHPQASRCVGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAHTQRSRGFCFI 60
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIV 89
+E++ DA+ A D SG V R + V
Sbjct: 61 YFENLNDARVAKDSCSGIEVDGRRIRV 87
>gi|374586124|ref|ZP_09659216.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373874985|gb|EHQ06979.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 102
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLPF SS+E+ +IF +G + ++ I ++T RG AFV + +A A++ L
Sbjct: 3 IYVGNLPFRASSDELQNIFAAHGTVARVTIPVDRETGRSRGFAFVEMPNDAEASEAINSL 62
Query: 78 SGFNVANRYLIV 89
+GF R L V
Sbjct: 63 NGFEFMGRMLKV 74
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
++G VA + L V Q +K+D A + +Y
Sbjct: 353 MNGRIVATKPLYVALAQ-----------RKEDRQAHLTNEY 382
>gi|310793820|gb|EFQ29281.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 24/130 (18%)
Query: 1 MATIPLRKG---NARLPPEV-----NRVLYVRNLPFN-ISSE----EMYDIFGKYGAIRQ 47
MA + +G NA LP +V N+ LYV NLP N I + E+Y +F YG +
Sbjct: 1 MAAVAPPRGLAPNASLPAKVTTIPPNQTLYVTNLPSNKIQKQDLRTELYLLFSTYGPVLD 60
Query: 48 IRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKD 107
I + RG A + + D+ A A+ L GF R L + Y K K
Sbjct: 61 IVAMKTMKMRGQAHITFRDVQTATQAMRSLEGFEFLGRPLTIQYA-----------KSKS 109
Query: 108 DELAKMQEKY 117
D +AK+ Y
Sbjct: 110 DFVAKLDGTY 119
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVY 64
K LPP + LYV NLP + ++ +F ++G + + + +++T RG AFV
Sbjct: 84 KNEEELPPRRTK-LYVGNLPRSCDIAQLTQLFQEFGTVESVEVVRNEETGISRGFAFVTM 142
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDD 108
+ +AK+A++ L G ++ R +IV + + +SKK K+ DD
Sbjct: 143 STVKEAKSAIEKLQGSDLGGRDMIVNFPAKV-LSKK---KETDD 182
>gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio]
Length = 643
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R L+V+NLP++++ EE+ +IF + IR I +G+S +RG A++ ++ A+ A++
Sbjct: 309 SRTLFVKNLPYSVTQEELKEIFDQAVDIR-IPMGNSGSSRGIAYLEFKSEAIAEKAMEEA 367
Query: 78 SGFNVANRYLIVLY 91
G +V R +I+ +
Sbjct: 368 QGSDVQGRSIIIDF 381
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
R N+VL V NL F + + + +F K + + + ++ +G AF+ +E++ DA
Sbjct: 390 GRATAAANKVLVVNNLAFTANEDALQSVFEKAVSYLEYLLETNGRPKGFAFLEFENVEDA 449
Query: 71 KTAVDHLSGFNVANRYLIVLYYQ 93
K A+++ + + R + + + Q
Sbjct: 450 KEALENCNNTEIEGRSIRLEFSQ 472
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|315044563|ref|XP_003171657.1| U1 small nuclear ribonucleoprotein A [Arthroderma gypseum CBS
118893]
gi|311344000|gb|EFR03203.1| U1 small nuclear ribonucleoprotein A [Arthroderma gypseum CBS
118893]
Length = 256
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDT 56
MAT + G+ LP N +YVRNL I E + +IF +YG+I +I ++
Sbjct: 1 MATT-VASGSTILP---NPTVYVRNLEERIKIDQLKEALTEIFSEYGSILEIVAKTNLKA 56
Query: 57 RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
+G AF+V++++ A A+D ++GF + + + VL Y +T+
Sbjct: 57 KGQAFIVFDNVDSATRAIDEVNGFELFEKPM-VLEYAKTR 95
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R+LP ++ + IFG++ +++R+ + +G AFV Y++ A +
Sbjct: 177 LPP--NKILFLRDLPETYDADGLSAIFGRFPGFKEVRMVPGR--KGIAFVEYDNESGAIS 232
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 233 AKEATSGMALGENEKPIKVTYQR 255
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 1 MATIPLRKGNARLPPEVNRV-----LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD 55
++T L GN+R P EV++ + VRN+PF + E+ +FG +G ++++R+ D
Sbjct: 732 LSTKSLSGGNSRAP-EVDKSARKTKIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKFD 790
Query: 56 T--RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQT 95
RG AF + +A+ A+ LS ++ R L++ + +
Sbjct: 791 GTHRGFAFCEFVTSKEARNAMTSLSQTHLYGRRLVLEWAEHC 832
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLPF + EE+++ F +G I + I +K +G AFV +E DAK A++ +
Sbjct: 325 LFVRNLPFTTTEEELHETFSHFGQINSVHIPVDDAKRNKGYAFVEFESKKDAKIAMESMD 384
Query: 79 GFNVANRYLIVLYYQQTK 96
G + R + ++ + TK
Sbjct: 385 GEDFQGRLIHIMPAKPTK 402
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NLPF+I SE + +F + G + + + SS +RG AFV + +A+ A+
Sbjct: 169 LYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMSTVEEAEAAIKKF 228
Query: 78 SGFNVANRYLIVLYYQQTKM 97
+GF + R L V + + ++
Sbjct: 229 NGFEIDGRSLRVNFPEVPRL 248
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAV 74
++ + ++NLPF + +++ +FG +G+++ +R+ + ++RG AF Y +A+ A+
Sbjct: 701 IDSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRGFAFAEYVSAKEAEHAM 760
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
L G ++ R L++ Y Q D ++E+ +MQ
Sbjct: 761 SALQGTHLLGRRLVLQYAQA-------DASNAEEEIERMQ 793
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDH 76
+RV+ V+N PF + E+ ++F +YG + ++ + + GT A V+++ I DA+ A
Sbjct: 484 DRVILVKNFPFGTTQPEIAEMFSEYGDLYKVMMPPA----GTIAIVIFKHIPDARAAFAK 539
Query: 77 LS--GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
L+ F + +LY ++ + ++K + DE+ +++ V+ +DK
Sbjct: 540 LAFRRFKTS-----ILYLEKGPKNLLPNEKMESDEVEHVKQDKIVTIEDK 584
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L++RNL + E+ +F +YG + ++ + + T +G A V +ED +A A +
Sbjct: 303 LFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQ 362
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKK-KDDELAKMQE 115
G R L +L + K + D+ K+ L K QE
Sbjct: 363 DGKIFQGRLLHILPGKPKKDYNRLDEHDLKNLPLKKQQE 401
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|448122956|ref|XP_004204573.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|448125223|ref|XP_004205131.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358249764|emb|CCE72830.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358350112|emb|CCE73391.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
Length = 841
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
NLPF + +++ ++FG +G I+ R+ D RG AFV + + +A+ A++ L G ++
Sbjct: 720 NLPFETTRKDIVELFGAFGQIKSARVPKKFDRSARGFAFVEFNLLKEAENAIEQLQGVHL 779
Query: 83 ANRYLIVLYYQQ 94
R L++ Y +Q
Sbjct: 780 LGRRLVMQYAEQ 791
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT-AFVVYEDIYDAKTAVDH 76
+RV+ V+N PF SS E+ ++F YG + +I + + GT A V + D+ A+ A
Sbjct: 488 DRVILVKNFPFGTSSSELGELFSVYGQLNRILMPPA----GTIAIVQFRDVPSARAAFSK 543
Query: 77 LS 78
L+
Sbjct: 544 LA 545
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 12 RLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAK 71
R+ +R LYV NLP +I E+ D+F KYG I ++ + G AFV +ED DA+
Sbjct: 37 RMSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAE 96
Query: 72 TAVDHLSGFN 81
A+ G+N
Sbjct: 97 DAIRGRDGYN 106
>gi|163310813|pdb|2JVO|A Chain A, Segmental Isotope Labeling Of Npl3
Length = 108
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N L+VR P ++ E+ +IFG +G +++++I G AFV +E+ A A++ +
Sbjct: 31 NTRLFVRPFPLDVQESELNEIFGPFGPMKEVKI-----LNGFAFVEFEEAESAAKAIEEV 85
Query: 78 SGFNVANRYLIVLY 91
G + AN+ L V+Y
Sbjct: 86 HGKSFANQPLEVVY 99
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+ R P + L++ NL FN + + +++ FG++G++ +R+ + ++T +G +V +
Sbjct: 296 GDQRSDP--SNTLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFA 353
Query: 66 DIYDAKTAVDHLSGFNVANRYL 87
D+ AK A+D +G + R +
Sbjct: 354 DVDTAKAAIDGAAGSELDGRVI 375
>gi|189091838|ref|XP_001929752.1| hypothetical protein [Podospora anserina S mat+]
gi|188219272|emb|CAP49252.1| unnamed protein product [Podospora anserina S mat+]
Length = 488
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDI 67
NA E N ++YVRNLP++ S++++ ++F G + Q I S +RG+ V +++
Sbjct: 380 NATAGTEKNEIIYVRNLPWSTSNDDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRFDNA 439
Query: 68 YDAKTAVDHLSGFNVANRYLIVLY 91
A+TA++ G+ R L + Y
Sbjct: 440 DTAETAINKFQGYQYGGRPLGLSY 463
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKY----GAIR-QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R ++V NLPFNI +++ D+F + G IR + +G +G+ VV+E DA+ A
Sbjct: 221 RQIFVSNLPFNIGWQDLKDLFRQSARTGGVIRADVHLGPDGRPKGSGIVVFESPDDARNA 280
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R + V
Sbjct: 281 IQQFNGYDWQGRVIEV 296
>gi|186703738|emb|CAQ43428.1| Protein HRB1 and Single-strand telomeric DNA-binding protein GBP2
[Zygosaccharomyces rouxii]
Length = 266
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E N ++Y NLPF+ ++ ++YD+F G + ++R S G A V YE++ DA
Sbjct: 184 ERNNLIYCANLPFSTATSDLYDLFETIGKLNNAELRFDSKGAPTGVAIVEYENVEDADVC 243
Query: 74 VDHLSGFNVANRYLIVLY 91
+D L+ +N L + Y
Sbjct: 244 IDRLNNYNYGGCDLEISY 261
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ +IF K+G +R+ + S RG FV +E+ DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + R + V Q Q ++ ++F+Q K+D
Sbjct: 253 GKELNGRIMFVGRAQKKMERQMELKRRFEQMKQD 286
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHDAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYGVST 121
+ +R + V ++ K K F + D++L ++ K+G +T
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNAT 218
>gi|163310858|pdb|2OSQ|A Chain A, Nmr Structure Of Rrm-1 Of Yeast Npl3 Protein
Length = 74
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N L+VR P ++ E+ +IFG +G +++++I G AFV +E+ A A++ +
Sbjct: 4 NTRLFVRPFPLDVQESELNEIFGPFGPMKEVKI-----LNGFAFVEFEEAESAAKAIEEV 58
Query: 78 SGFNVANRYLIVLY 91
G + AN+ L V+Y
Sbjct: 59 HGKSFANQPLEVVY 72
>gi|87308451|ref|ZP_01090592.1| RNA-binding protein [Blastopirellula marina DSM 3645]
gi|87289008|gb|EAQ80901.1| RNA-binding protein [Blastopirellula marina DSM 3645]
Length = 149
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLP+ S E+ ++FG+YG + + + ++T RG FV DA A + L
Sbjct: 5 LYVGNLPYGYGSSELENLFGQYGQVASASVINDRETGRSRGFGFVEMASDGDALAATEAL 64
Query: 78 SGFNVANRYLIV 89
+GF+V R L+V
Sbjct: 65 NGFDVDGRKLVV 76
>gi|317150318|ref|XP_001823946.2| U2 snRNP component ist3 [Aspergillus oryzae RIB40]
Length = 221
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 15/112 (13%)
Query: 13 LPPEVN--------RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAF 61
+PPE + +Y+ LPF++S ++ IF +YG + + K+T RG AF
Sbjct: 19 IPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKETGKSRGFAF 78
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
+ YED AVD+L G V R L V + + K+ D +++ D +AK+
Sbjct: 79 LKYEDQRSTDLAVDNLGGSTVLGRILRVDHVRY----KRRDDEEEGDNVAKL 126
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NLPF+I SE + +F + G + + + SS +RG AFV + +A+ A+
Sbjct: 161 LYVGNLPFDIDSEGLAKMFDESGVVEMVEVIYDRSSGRSRGFAFVTMSTVEEAEAAIKKF 220
Query: 78 SGFNVANRYLIVLYYQQTKM 97
+GF + R L V + + ++
Sbjct: 221 NGFEIDGRSLRVNFPEVPRL 240
>gi|402083842|gb|EJT78860.1| multiple RNA-binding domain-containing protein 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 842
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS--KDTRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + ++ +FG YG +R +R+ + TRG AF + +A+ A++ L
Sbjct: 714 IIIKNLPFEATRADVRALFGTYGQLRAVRVPKNFENKTRGFAFAEFTTPKEAENALNALG 773
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
++ R L++ + Q + ++E+AKMQ+K
Sbjct: 774 STHLLGRKLVLEFAQAEAVD-------AEEEIAKMQKK 804
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIR--IGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLP++ + +++ F K+G++ ++ + S ++G A V++ A A
Sbjct: 312 LFVRNLPYSATEDDLRSHFEKFGSVEEVHLPVAKSSASKGYALVLFTSASSAIDAFQKSD 371
Query: 79 GFNVANRYLIVLYYQQTKMSK 99
G R L VL Q K SK
Sbjct: 372 GSLFQGRILHVLPAQSKKESK 392
>gi|452004844|gb|EMD97300.1| hypothetical protein COCHEDRAFT_1164036 [Cochliobolus
heterostrophus C5]
Length = 475
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + +I+ + +RGT V +E DA+T+
Sbjct: 371 EPSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKAADAETS 430
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSK 99
+ +G+ R L + Y + T +
Sbjct: 431 IAKFTGYQYGGRPLGLAYVKYTNVGN 456
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIF---GKYGAIRQIRIGSSKDTR--GTAFVVYEDIYD 69
P R +YV NLP+N+ +++ D+F G + + + + D R G+ V +E D
Sbjct: 209 PTGARQVYVSNLPYNVGWQDLKDLFRQAANNGQVLRADVHIAPDGRPKGSGVVAFETPED 268
Query: 70 AKTAVDHLSGFNVANRYLIV 89
A+ A+ +G++ R L V
Sbjct: 269 ARNAITQFNGYDWQGRNLEV 288
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 9 GNARLPPEVNRV-----LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGTA 60
GN LPP V+ LYV +L FN+S ++ +F +G + + R + ++G A
Sbjct: 383 GNLNLPPGVSAPHGGMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYA 442
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
FV Y+ DAK A++ + GF +A R L V + K S ++ Q+ DE
Sbjct: 443 FVQYKRAEDAKMALEQMDGFELAGRTLRVNTVHE-KGSARYTQQDSLDE 490
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 9 GNARLPPEVNRV-----LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGTA 60
GN LPP V+ LYV +L FN++ ++ +F +G + + R + ++G A
Sbjct: 103 GNLNLPPGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYA 162
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
FV Y+ DAK A++ + GF +A R L V + K S ++ Q+ DE
Sbjct: 163 FVQYKRAEDAKMALEQMEGFELAGRTLRVNTVHE-KGSTRYTQQDTLDE 210
>gi|261329063|emb|CBH12042.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V LPF + +YD+F YG + I I S ++G AFV Y ++ +A TA+
Sbjct: 66 LFVGQLPFETDEKRLYDLFSAYGTVEHIHILRDSQNRSKGAAFVTYSNVEEADTAI---- 121
Query: 79 GFNVANRY 86
F + NRY
Sbjct: 122 -FTLHNRY 128
>gi|301091256|ref|XP_002895817.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096594|gb|EEY54646.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 122
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-------TRGTAFVVYEDIYDAKTA 73
++VRNLPF ++ EE+ +F + G +R+I + K TRG AFV + DA A
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVRKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAAVA 63
Query: 74 VDHLSGFNVANRYLIVLY 91
V+ L+ + R +++ Y
Sbjct: 64 VEKLNKTDFQGRKMLIDY 81
>gi|149241847|ref|XP_001526367.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450490|gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 868
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++FG +G+++ +R+ D RG AF+ + + +A+ A+ L
Sbjct: 746 IIIKNLPFEATRKDLLELFGAFGSLKSVRVPKKFDQSARGFAFIEFNLLKEAENAMTQLE 805
Query: 79 GFNVANRYLIVLYYQQ 94
G ++ R L++ Y ++
Sbjct: 806 GVHLLGRRLVMQYAER 821
>gi|72390724|ref|XP_845656.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176798|gb|AAX70896.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802192|gb|AAZ12097.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V LPF + +YD+F YG + I I S ++G AFV Y ++ +A TA+
Sbjct: 66 LFVGQLPFETDEKRLYDLFSAYGTVEHIHILRDSQNRSKGAAFVTYSNVEEADTAI---- 121
Query: 79 GFNVANRY 86
F + NRY
Sbjct: 122 -FTLHNRY 128
>gi|71667203|ref|XP_820553.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885902|gb|EAN98702.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAK 71
PE R L V LP + ++Y +FG++G I ++I ++++RG FV Y + A
Sbjct: 72 PEALRNLIVNYLPPMMDETQLYGLFGQFGPIESVKIIYDKETRESRGYGFVKYVHYFSAS 131
Query: 72 TAVDHLSGFNVANRYLIVLY 91
A + L+G+ +A + L V Y
Sbjct: 132 YAANSLNGYCIAGKRLKVAY 151
>gi|119174440|ref|XP_001239581.1| hypothetical protein CIMG_09202 [Coccidioides immitis RS]
gi|303314307|ref|XP_003067162.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106830|gb|EER25017.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037431|gb|EFW19368.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869777|gb|EAS28302.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 251
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N +YVRNL I E++ +IF +YG+I +I ++ +G AF+V++++
Sbjct: 11 IPP--NSTVYVRNLEERIKVEQLKEALSEIFSEYGSILEIVAKTNVKAKGQAFIVFDNVD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
A A++ ++GF + + + VL Y +T+ ++ + EL
Sbjct: 69 SATRAIEEINGFELFEKPM-VLDYAKTRSDATVLREGGEQEL 109
>gi|31074186|gb|AAO73304.1| RNA-binding protein RBP-3 [Trypanosoma cruzi]
gi|31074959|gb|AAP42137.1| RNA-binding protein RBP-3 [Trypanosoma cruzi]
Length = 198
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAK 71
PE R L V LP + ++Y +FG++G I ++I ++++RG FV Y + A
Sbjct: 72 PEALRNLIVNYLPPMMDETQLYGLFGQFGPIESVKIIYDKETRESRGYGFVKYVHYFSAS 131
Query: 72 TAVDHLSGFNVANRYLIVLY 91
A + L+G+ +A + L V Y
Sbjct: 132 YAANSLNGYCIAGKRLKVAY 151
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+YV NLP ++ ++ D+F KYG IR I + +++ T AFV +ED DA+ AV +G+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 81 NVANRYLIVLY 91
+ L V Y
Sbjct: 66 GFGDCKLRVEY 76
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + D+F ++G I +++ S +RG FV +E DA+ AV ++
Sbjct: 193 IYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHSRGFGFVNFEKHEDAQKAVTDMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQD 286
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I E++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDEKLRKEFAPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYIQRLSTMR 390
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIR-IGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I + + +RG FV +E A+ A+ ++G
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQNAIRTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+YV NLP ++ ++ D+F KYG IR I + +++ T AFV +ED DA+ AV +G+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRSTIPFAFVRFEDPRDAEDAVFGRNGY 65
Query: 81 NVANRYLIVLY 91
+ L V Y
Sbjct: 66 GFGDCKLRVEY 76
>gi|451853414|gb|EMD66708.1| hypothetical protein COCSADRAFT_158789 [Cochliobolus sativus
ND90Pr]
Length = 477
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + +I+ + +RGT V +E DA+T+
Sbjct: 373 EPSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKAADAETS 432
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSK 99
+ +G+ R L + Y + T +
Sbjct: 433 IAKFTGYQYGGRPLGLAYVKYTNVGN 458
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIF---GKYGAIRQIRIGSSKDTR--GTAFVVYEDIYD 69
P R +YV NLP+N+ +++ D+F G + + + + D R G+ V +E D
Sbjct: 207 PTGARQVYVSNLPYNVGWQDLKDLFRQAANNGQVLRADVHIAPDGRPKGSGVVAFETPED 266
Query: 70 AKTAVDHLSGFNVANRYLIV 89
A+ A+ +G++ R L V
Sbjct: 267 ARNAITQFNGYDWQGRNLEV 286
>gi|440640342|gb|ELR10261.1| hypothetical protein GMDG_04647 [Geomyces destructans 20631-21]
Length = 584
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVD 75
N ++YVRNLP++ S+E++ ++F G + Q I + +RGT V ++ + +A TA+
Sbjct: 482 NEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDTVENADTAIS 541
Query: 76 HLSGFNVANRYL 87
SG+ R L
Sbjct: 542 KFSGYQYGGRPL 553
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV NLP+ + +++ D+F + GA+ + IG +G+ V +E DA+ A
Sbjct: 324 RQIYVNNLPYTVGWQDLKDLFRQAAREGAVIRADVHIGPDGRPKGSGIVAFESPNDARNA 383
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 384 IQQFNGYDWQGRPLEV 399
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
+P E LYV N+P + + E++YD+F YG + + I + K +R AFV Y D DA
Sbjct: 1 MPQEDEAKLYVGNIPEDATKEDIYDLFETYGRVLYVDIKNGKISR-FAFVAYRDFRDADD 59
Query: 73 AVDHLSGFNVANRYLIV 89
AV++L F+ R L V
Sbjct: 60 AVNYLDKFDYHGRSLRV 76
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I +I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 65
Query: 78 SGFNV-ANRYLIVLYY 92
G+N NR + L +
Sbjct: 66 DGYNFDGNRLRVELAH 81
>gi|281201366|gb|EFA75578.1| hypothetical protein PPL_11083 [Polysphondylium pallidum PN500]
Length = 481
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
R L+VRN+ + + +++ +F K G IR + S + RG AF+ Y D+ DA+ A + L
Sbjct: 230 RTLFVRNIAYVVKEDDVISLFAKSGDIR--KNFSVIENRGIAFITYFDLRDAEKAKNELQ 287
Query: 79 GFNVANRYLIVLY 91
GFN+ R + + +
Sbjct: 288 GFNMGGRTISIHF 300
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 308
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDH 76
R L+V NLP+++S ++ ++FG+ G + + I KD RG AFV +A+ A+D
Sbjct: 95 RKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDK 154
Query: 77 LSGFNVANRYLIVLYYQQTK 96
F V+ R + V + ++ K
Sbjct: 155 FDTFQVSGRIISVSFARRFK 174
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+ PE + L+V NL FN + E + + F A++ +RI + +++ +G A+V + + D
Sbjct: 405 ISPESD-TLFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVED 463
Query: 70 AKTAVDHLSGFNVANR 85
AKTA + L+G N+ R
Sbjct: 464 AKTAFNQLNGSNLDGR 479
>gi|401423233|ref|XP_003876103.1| RNA-binding protein, putative, UPB2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492344|emb|CBZ27618.1| RNA-binding protein, putative, UPB2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 167
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F ++G I ++I ++TR G FV Y A+
Sbjct: 25 PEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQ 84
Query: 72 TAVDHLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKM 113
AV+ L+GFN+ N+ L + L + + ++ ++ + A M
Sbjct: 85 QAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNANPAANM 127
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I++ ++T RG A++ YED AVD+L
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIVLY 91
G N+ +R + V +
Sbjct: 95 GGANIMDRIIRVDH 108
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I++ K+T RG A++ YED AVD+L
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
G ++ +R + V + + K D+ +D+ + ++ GV +
Sbjct: 95 GGASIMDRIIRVDH---ARYKPKDDEDMRDNTMGELDVDPGVES 135
>gi|226358689|gb|ACO51197.1| poly A binding protein, cytoplasmic 1 a [Hypophthalmichthys
nobilis]
Length = 290
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ +IF KYG IR+ + S ++G FV +E DA+ AVD ++
Sbjct: 120 VYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMN 179
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 180 GKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQD 213
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 28 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 87
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 88 MLLNDRKVFVGRFKSRK 104
>gi|255726322|ref|XP_002548087.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
gi|240134011|gb|EER33566.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
Length = 846
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 25 NLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
NLPF + +++ ++FG +G ++ +R+ D RG AFV + + +A+TA++ L G ++
Sbjct: 725 NLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMNQLEGVHL 784
Query: 83 ANRYLIVLYYQQ 94
R L++ Y ++
Sbjct: 785 LGRRLVMQYAEK 796
>gi|399216364|emb|CCF73052.1| unnamed protein product [Babesia microti strain RI]
Length = 717
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTA 73
+V+ L ++NL F + E+ +F YG +R +RI S RG AFV +E DA A
Sbjct: 613 KVSNKLSIKNLAFQATKSEVRKLFSLYGNVRTVRIPKSMSNSNRGFAFVEFESKSDAVNA 672
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQ 103
++ L ++ R+LI+ + Q T +FDQ
Sbjct: 673 LEALQHTHLYGRHLILDFAQPT----QFDQ 698
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
L++ +L F+++ +++Y+ FG++G ++ +R+ + +DT +G +V + + DA A+
Sbjct: 295 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKA 354
Query: 77 LSGFNVANRYLIVLY 91
++G +A R + V +
Sbjct: 355 MNGAEIAGRAIRVDF 369
>gi|348670163|gb|EGZ09985.1| hypothetical protein PHYSODRAFT_262195 [Phytophthora sojae]
Length = 228
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+YV LPF +S ++ + ++G + I R G + +G AF+ +ED AVD+L
Sbjct: 35 VYVGGLPFELSEGDVLCVLSQFGEVEDIHLVRDGKTGKPKGFAFLKFEDQRSTVLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKF--DQKKKDDE 109
+GF + +R L V + + K+ K+ D +DDE
Sbjct: 95 NGFRLLDRVLRVDHVLKYKLPKELQEDSDSEDDE 128
>gi|320583151|gb|EFW97367.1| Cleavage and polyadenylation factor I (CF I) component [Ogataea
parapolymorpha DL-1]
Length = 654
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKT 72
E +RV+Y+ +PF+ + +++ DI G + ++ ++T +G AF+ Y+DI A++
Sbjct: 9 EPSRVIYIGGIPFDQTEDQILDIARSVGPVVSSKLLFDRETGKSKGYAFIEYQDIETARS 68
Query: 73 AVDHLSGFNVANRYL 87
AV +L+ + + NRYL
Sbjct: 69 AVRNLNNYAIGNRYL 83
>gi|146088553|ref|XP_001466082.1| RNA-binding protein, putative, UPB2 [Leishmania infantum JPCM5]
gi|398016386|ref|XP_003861381.1| RNA-binding protein, putative, UPB2 [Leishmania donovani]
gi|134070184|emb|CAM68519.1| RNA-binding protein, putative, UPB2 [Leishmania infantum JPCM5]
gi|322499607|emb|CBZ34681.1| RNA-binding protein, putative, UPB2 [Leishmania donovani]
Length = 167
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F ++G I ++I ++TR G FV Y A+
Sbjct: 25 PEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQ 84
Query: 72 TAVDHLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKM 113
AV+ L+GFN+ N+ L + L + + ++ ++ + A M
Sbjct: 85 QAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNANPAANM 127
>gi|401423231|ref|XP_003876102.1| RNA-binding protein, putative, UPB1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492343|emb|CBZ27617.1| RNA-binding protein, putative, UPB1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 174
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F ++G I ++I ++TR G FV Y A+
Sbjct: 32 PEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQ 91
Query: 72 TAVDHLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKM 113
AV+ L+GFN+ N+ L + L + + ++ ++ + A M
Sbjct: 92 QAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNANPAANM 134
>gi|313230196|emb|CBY07900.1| unnamed protein product [Oikopleura dioica]
Length = 423
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAV 74
N LYV +P +I+ E+ ++FG+ G I RI KDT +G AF+ Y+ +A+ AV
Sbjct: 205 NTNLYVAGIPRSITLAEIKNLFGRLGKIISARILHDKDTGLSKGVAFIRYDTRVEAERAV 264
Query: 75 DHLSGFNVANRYLIVLYYQQTKMSK 99
H+ FN L V + ++ + K
Sbjct: 265 KHMHHFNYEGEVLTVKFAKRQSLKK 289
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDHL 77
L V LP N + +++ ++F G I ++ ++T+ G FV + DAK AVD
Sbjct: 122 LIVNYLPQNYTQDQLRELFSSIGDIETCKLCRHRETKMSLGYGFVNFRRSSDAKRAVDSF 181
Query: 78 SGFNVANRYLIVLY 91
+G ++ + + V Y
Sbjct: 182 NGLSIQTKSIKVSY 195
>gi|254582829|ref|XP_002499146.1| ZYRO0E04928p [Zygosaccharomyces rouxii]
gi|238942720|emb|CAR30891.1| ZYRO0E04928p [Zygosaccharomyces rouxii]
Length = 409
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E N ++Y NLPF+ ++ ++YD+F G + ++R S G A V YE++ DA
Sbjct: 327 ERNNLIYCANLPFSTATSDLYDLFETIGKLNNAELRFDSKGAPTGVAIVEYENVEDADVC 386
Query: 74 VDHLSGFNVANRYLIVLY 91
+D L+ +N L + Y
Sbjct: 387 IDRLNNYNYGGCDLEISY 404
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I++ ++T RG A++ YED AVD+L
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIVLY 91
G N+ +R + V +
Sbjct: 95 GGANIMDRIIRVDH 108
>gi|430812117|emb|CCJ30453.1| unnamed protein product [Pneumocystis jirovecii]
Length = 258
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDI 67
A PP ++V++V N+P+++S E++ DIF + G I + R+ K+T +G F Y D+
Sbjct: 2 ASKPP--SKVVFVGNIPYDVSEEQLKDIFRQIGPINRFRLVFDKETNKPKGYGFCEYPDV 59
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
A AV +L+ ++ R L V
Sbjct: 60 ATASAAVRNLNNHDINGRQLRV 81
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + + FG+YGA +++ + +RG FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQD 286
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A+D ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like
[Oreochromis niloticus]
Length = 241
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+YV NLP ++ ++ D+F KYG IR+I + +++ T AFV +ED DA AV +G+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFVRFEDPRDADDAVYGRNGY 65
Query: 81 NVANRYLIVLY 91
+ L V Y
Sbjct: 66 GYGDSKLRVEY 76
>gi|340960349|gb|EGS21530.1| hypothetical protein CTHT_0033900 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP NR+L+V+NLP + + + IFG++ R++R+ + G AFV YE A T
Sbjct: 171 LPP--NRILFVQNLPDDFDKDALTAIFGRFEGFREVRMVPGRS--GIAFVEYESEAGAIT 226
Query: 73 AVDHLSGFNVAN--RYLIVLYYQQ 94
A ++ +G + N + + V Y +Q
Sbjct: 227 AKENTAGMPLKNGEKIMKVTYQRQ 250
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 20 VLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YVRNL + E +Y IF +YG + I ++ +G AF+V++ A TAV+
Sbjct: 13 TVYVRNLEERVKVDKLKEALYTIFSEYGNVIDIVAKTNLKAKGQAFIVFDKPEPALTAVE 72
Query: 76 HLSGFNVANRYLIV 89
L GF + + + V
Sbjct: 73 ELQGFELFEKPMQV 86
>gi|302663591|ref|XP_003023436.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187433|gb|EFE42818.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
G V R L V + + K+ D + +D L + E V D+
Sbjct: 95 GGATVLGRVLRVDHVR----YKRRDDEGTEDNLVNVDENGEVMESDR 137
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R LYV NLP +I E+ D+F KYG I ++ + + T G AFV +ED +A+ A+
Sbjct: 6 SRTLYVGNLPGDIRWREVKDLFYKYGLIVRVDLRNPPRTPGYAFVQFEDACNAEEAIRGR 65
Query: 78 SGFN 81
G+N
Sbjct: 66 DGYN 69
>gi|432885940|ref|XP_004074826.1| PREDICTED: serine/arginine-rich splicing factor 9-like isoform 1
[Oryzias latipes]
Length = 117
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+Y+ NLP ++ ++ D+F KYG IR+I + +++ T AF+ +ED DA AV +G+
Sbjct: 6 IYIGNLPIDVQERDIEDLFFKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGY 65
Query: 81 NVANRYLIVLYYQQT 95
N L V Y + T
Sbjct: 66 VYGNSKLRVEYPRST 80
>gi|322701869|gb|EFY93617.1| RNP domain protein [Metarhizium acridum CQMa 102]
Length = 408
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKY----GAIR-QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV NLPFNI +++ D+F + G IR + IG +G+ VV+E+ DA+ A
Sbjct: 150 RQIYVANLPFNIGWQDLKDLFRQAARVGGVIRADVHIGPDGRPKGSGIVVFENPDDARNA 209
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 210 IQQFNGYDWQGRMLEV 225
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDIYDAKTA 73
E + +YVRNLP++ S++++ D+F G + Q I S +RGT V ++ A+TA
Sbjct: 305 EKSETIYVRNLPWSTSNDDLVDLFTTIGKVEQAEIQYEPSGRSRGTGVVRFDTADTAETA 364
Query: 74 VDHLSGFNVANRYL 87
+ G+ R L
Sbjct: 365 IAKFQGYQYGGRPL 378
>gi|154309069|ref|XP_001553869.1| hypothetical protein BC1G_07429 [Botryotinia fuckeliana B05.10]
Length = 157
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 15 PEVNRVLYVRNLPFNISS----EEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
P N LYV NL +I E + ++F +YG I +I ++ +G AF+V+ED+ A
Sbjct: 11 PPPNATLYVNNLEESIKPAALIEALTELFSEYGTILEIVAKTNLKAKGQAFIVFEDVESA 70
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
A++ + GF + + + + Y
Sbjct: 71 TKAIEDIQGFELFGKEMRIAY 91
>gi|453088501|gb|EMF16541.1| RRM_1-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 114
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LY+ LPF +S ++ IF +YG I + KDT RG F+ YED AVD+L
Sbjct: 35 LYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIV 89
SG V R + V
Sbjct: 95 SGAGVMGRVISV 106
>gi|322695955|gb|EFY87755.1| putative MRD1 [Metarhizium acridum CQMa 102]
gi|326633449|gb|ADZ99447.1| pre-rRNA processing protein [Metarhizium anisopliae]
gi|326633451|gb|ADZ99448.1| pre-rRNA processing protein [Metarhizium anisopliae]
Length = 841
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIR--IGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+VRNLP++ + +++++ F K+G ++++ + +S+ T+G A V++ D DA A L
Sbjct: 317 LFVRNLPYSATEDDIWETFDKFGTLQEVHLPLTASRATKGFAMVLFTDSSDAVRAFQALD 376
Query: 79 GFNVANRYLIVL 90
G R L ++
Sbjct: 377 GVTFQGRILHII 388
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 719 IVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTARGFAFADFVTAREAENALNALK 778
Query: 79 GFNVANRYLIVLY 91
++ R L++ +
Sbjct: 779 DTHLLGRRLVLDF 791
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+++ LPF+++ ++ IF +YG + I + KD+ +G F+ YED AVD+
Sbjct: 36 VFIGGLPFDLTEGDIICIFSQYGEVVNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNF 95
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
+G + NR + V + K+ K+ KK D E K+
Sbjct: 96 NGIKILNRTIRVDHVSNYKVPKQ--GKKTDAETKKL 129
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I +I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGR 65
Query: 78 SGFNV-ANRYLIVLYY 92
G+N NR + L +
Sbjct: 66 DGYNFDGNRLRVELAH 81
>gi|358396862|gb|EHK46237.1| hypothetical protein TRIATDRAFT_307061 [Trichoderma atroviride IMI
206040]
Length = 242
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+++N+P + + IFG++ R+IR+ + RG AFV Y++ A T
Sbjct: 165 LPP--NKILFIQNVPDEYDIDGLNAIFGRFDGFREIRLVPGR--RGIAFVEYQNEQGAIT 220
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G +A++ + V Y +Q
Sbjct: 221 AKENTAGMLLADKPIKVTYQRQ 242
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 20 VLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV+NL + SE + IF ++G + I + +G AF+V++ A+ A++
Sbjct: 9 TVYVQNLEERVKPEVLSEALKTIFSEFGNVIDIVAKRNLKAKGQAFIVFDQPSAAQNAIE 68
Query: 76 HLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ GF + + L + + Q+ + + + K DEL + +++ + KDK
Sbjct: 69 EVEGFELFGKPLRVAMARMQSDRTVEINCSK--DEL-ETHKRHRQAEKDK 115
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F ++G + +++ S +RG FV +E +A+ AV +++
Sbjct: 193 IYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHSRGFGFVNFEKHEEAQKAVVNMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+Q K+D
Sbjct: 253 GREVSGRLLYVGRAQKRVERQNELKRRFEQMKQD 286
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A+ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|367022286|ref|XP_003660428.1| hypothetical protein MYCTH_2314150 [Myceliophthora thermophila ATCC
42464]
gi|347007695|gb|AEO55183.1| hypothetical protein MYCTH_2314150 [Myceliophthora thermophila ATCC
42464]
Length = 247
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP NR+L+V+NLP ++ + + IFG++ R++R + G AFV YE A T
Sbjct: 168 LPP--NRILFVQNLPDDMDKDALTAIFGRFEGFREVRTVPGRS--GIAFVEYEAEAGAIT 223
Query: 73 AVDHLSGFNVAN--RYLIVLYYQQ 94
A ++ +G + N + + V Y +Q
Sbjct: 224 AKENTAGMPLKNGEKLMKVTYQRQ 247
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YVRNL + E + + +F ++G + I ++ +G AFVV++ A A++
Sbjct: 9 TVYVRNLEERVKPEPLKEALRAVFSEFGNVIDIVAKTNLKAKGQAFVVFDKPESAHAAIE 68
Query: 76 HLSGFNVANRYLIVLYYQ--------QTKMSKKFDQKKK 106
+ GF + + + V + +T +++FD K+
Sbjct: 69 EVQGFELFEKPMQVALARTRSDATVLRTGNAEEFDAHKR 107
>gi|330913095|ref|XP_003296184.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
gi|311331880|gb|EFQ95720.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
Length = 481
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + +YVRNLP++ S+E++ ++F G + +I+ + +RGT V +E DA+T+
Sbjct: 377 EPSNTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKAADAETS 436
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMS 98
+ +G+ R L + Y + T +
Sbjct: 437 IAKFTGYQYGGRPLGLAYVKYTNLG 461
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTA 73
R +YV NLP+ + +++ D+F G + + + ++ D R G+ V +E DA+ A
Sbjct: 213 RQVYVANLPYTVGWQDLKDLFRQAANNGQVLRADVHTAPDGRPKGSGIVAFETPEDARNA 272
Query: 74 VDHLSGFNVANRYLIV 89
+ +G+ R L V
Sbjct: 273 ITQFNGYEWQGRNLEV 288
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLP NI+ +E+ +IFG YG I Q I K T RG AFV Y+ +A+ A+ +L
Sbjct: 106 LYVTNLPKNITEQELDNIFGPYGFIVQKNILKDKVTGMPRGVAFVRYDKKEEAQAAISNL 165
Query: 78 SG 79
+G
Sbjct: 166 NG 167
>gi|320581035|gb|EFW95257.1| polyadenylate-binding protein [Ogataea parapolymorpha DL-1]
Length = 541
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
LYV+N P +++ E++ +FG+YG + + + G+ RG AF+ ++ DA A ++L
Sbjct: 190 LYVKNFPDDLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLD 249
Query: 79 GFNVANRYLIVL 90
GF +A Y + L
Sbjct: 250 GFEIAPGYRLQL 261
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI-----GSSKDTRGTAFVVYEDIYDAKTAVD 75
LYVR L +S+++ IF +YGA+ +I G SK G F+ + D +A+ A+D
Sbjct: 97 LYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDDFGVSK---GYGFINFADRIEAQKAID 153
Query: 76 HLSGFNVANRYLIVLYY 92
+L+G NV +L V ++
Sbjct: 154 NLNGVNVDGNHLFVNHH 170
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 21/100 (21%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS------------SKDT---------RGT 59
LY+ +LP +++Y++F +G I +I + +DT RG
Sbjct: 331 LYIIHLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGEEDTESKSREGRSRGF 390
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSK 99
FV + DA A+ ++G+ V + +++ + + Q K +K
Sbjct: 391 GFVCFNKPLDASKALVSMNGYRVDDSHVLEVSFAQRKENK 430
>gi|238499545|ref|XP_002381007.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|83772685|dbj|BAE62813.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692760|gb|EED49106.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|391869311|gb|EIT78510.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 291
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF++S ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G V R L V + + K+ D +++ D +AK+
Sbjct: 95 GGSTVLGRILRVDHVRY----KRRDDEEEGDNVAKL 126
>gi|189191918|ref|XP_001932298.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973904|gb|EDU41403.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 468
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + +YVRNLP++ S+E++ ++F G + +I+ + +RGT V +E DA+T+
Sbjct: 364 EPSNTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKAADAETS 423
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMS 98
+ +G+ R L + Y + T +
Sbjct: 424 IAKFTGYQYGGRPLGLAYVKYTNLG 448
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTA 73
R +YV NLP+N+ +++ D+F G + + + ++ D R G+ V +E DA+ A
Sbjct: 202 RQVYVANLPYNVGWQDLKDLFRQAANNGQVLRADVHTAPDGRPKGSGIVAFETPEDARNA 261
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 262 ITQFNGYDWQGRNLEV 277
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL N+S E++ + F ++GA+ I ++ ++G FV YE+ A AV+ L
Sbjct: 217 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEEGKSKGFGFVCYEEPEGAAAAVEKLD 276
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G+ + +V Q + ++ KFDQ++++
Sbjct: 277 GYTEDEKTWVVCRAQKKAEREAELKAKFDQERRE 310
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
LY++NL E++ ++F ++G I R+ +S +RG+AFV + +A AV ++
Sbjct: 320 LYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVTEMN 379
Query: 79 GFNVANRYLIVLYYQQ 94
G V + L V Q+
Sbjct: 380 GKMVGAKPLYVALAQR 395
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 5 PLRKGNARLPPEVNRV----LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRG 58
P+R ++ P V R ++++NL I ++ + D F ++G I ++ +++G
Sbjct: 107 PIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTITSAKVAMDGQGNSKG 166
Query: 59 TAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ 94
FV +E A+ A+D+++G + ++ + V +Q+
Sbjct: 167 YGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPFQR 202
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDI 67
A+ P LYV +L +++ ++Y+ F G + IR+ TR G A+V ++
Sbjct: 29 AQQPGAGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSP 88
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQ 94
DA A+D L+ F V N I + Y Q
Sbjct: 89 NDAAHAIDVLN-FQVINGKPIRVLYSQ 114
>gi|242037751|ref|XP_002466270.1| hypothetical protein SORBIDRAFT_01g004800 [Sorghum bicolor]
gi|241920124|gb|EER93268.1| hypothetical protein SORBIDRAFT_01g004800 [Sorghum bicolor]
Length = 924
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
+ VRNLPF I+ +E+ D+FG G + + I D ++G AFV + DA+ A+ ++
Sbjct: 288 VIVRNLPFKITEKEIMDMFGSAGFVWDVSIPHKSDEGISKGFAFVSFTRKQDAENAIKNI 347
Query: 78 SGFNVANRYLIVLY 91
+G VA R + V +
Sbjct: 348 NGKVVAKRPVAVDW 361
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVD 75
++V NLP+ S ++ +F + G +R+ + GS K +RG FV + + DA A+
Sbjct: 35 TVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAEKGSEK-SRGFGFVQFATVQDADRAIQ 93
Query: 76 HLSGFNVANRYLIV------------LYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTK 122
+GF VA R + V L ++ K D K + DE A ++ G S K
Sbjct: 94 QKNGFPVAGRKIRVKLAMNRAPLKERLQKKENMQVKDSDAKDEADETAPAEKHKGKSHK 152
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 17 VNRVLYVRNLPFNISSEEM---YDIFGKYGAIRQIRIGSSKDTRGTAFVVY 64
++R +++ NLPF+IS+EE+ + +FGK + + +K RGT F+ +
Sbjct: 499 LDRTIFISNLPFDISNEEVTARFSVFGKVESFFPVLHKLTKRPRGTGFMKF 549
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PP L++ +L F+++ +++Y+ FG++G ++ +R+ + +DT +G +V + + DA
Sbjct: 293 PP--AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 350
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
A+ ++G +A R + V +
Sbjct: 351 SAALKAMNGAEIAGRAIRVDF 371
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ +T +G F+ + D DAK A++ L
Sbjct: 262 LYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQL 321
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 322 NGFELAGRPMKV 333
>gi|347838217|emb|CCD52789.1| similar to u2 small nuclear ribonucleoprotein b'' [Botryotinia
fuckeliana]
Length = 252
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 15 PEVNRVLYVRNLPFNISS----EEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
P N LYV NL +I E + ++F +YG I +I ++ +G AF+V+ED+ A
Sbjct: 11 PPPNATLYVNNLEESIKPAALIEALTELFSEYGTILEIVAKTNLKAKGQAFIVFEDVESA 70
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
A++ + GF + + + + Y
Sbjct: 71 TKAIEDIQGFELFGKEMRIAY 91
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+V+NLP + + IFG++ R++R+ + +G AFV YE +
Sbjct: 173 LPP--NKILFVQNLPEEYDVDMLTSIFGRFEGFREVRLVPGR--KGIAFVEYETETGSIG 228
Query: 73 AVDHLSGFNVAN-RYLIVLYYQQ 94
A ++ +G + + + +I + YQ+
Sbjct: 229 AKENTAGMALGDEQKVIKVTYQR 251
>gi|171696032|ref|XP_001912940.1| hypothetical protein [Podospora anserina S mat+]
gi|170948258|emb|CAP60422.1| unnamed protein product [Podospora anserina S mat+]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 11 ARLPPEVNRVLYVRNLPFN-ISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYE 65
A +PP N+ LYV NLP N I E++ Y +F YGA+ + + RG A +VY+
Sbjct: 15 ASVPP--NQTLYVTNLPSNKIQKEDLRTALYMLFSTYGAVLDVVALKTMKMRGQAHIVYK 72
Query: 66 DIYDAKTAVDHLSGFNVANRYL 87
DI A A+ L+GF R L
Sbjct: 73 DIQTATQAMRSLNGFEFFGREL 94
>gi|392562565|gb|EIW55745.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 985
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDA 70
PPEV L+VRN+PF + +E+ +F +G +R RI G + +RGT F + + DA
Sbjct: 490 PPEVGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITMDGPTGRSRGTGFACFWNKEDA 549
Query: 71 KTAVDH 76
A++
Sbjct: 550 DKAIEQ 555
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI-------------------GSSKD 55
P N L VRNLPF+I+ +++ IF YG I + I G+SK
Sbjct: 253 PNRNSRLIVRNLPFDITEQDLRSIFLPYGPIHSVHIPLDVKKEEAKEEEADEEEEGTSKP 312
Query: 56 ----TRGTAFVVYEDIYDAKTAVDHLSGFNV 82
T+G AF+ + DA+ A++ +G V
Sbjct: 313 RPPRTKGFAFIWFLSRKDAEKAMEKCNGMTV 343
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKT 72
E + VL+V NL ++ + ++++++FG++G ++ +R+ + ++T +G +V + DI AK
Sbjct: 394 EPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKK 453
Query: 73 AVDHLSGFNVANRYLIVLYYQ 93
A + LSG VA R + + Y Q
Sbjct: 454 AFEGLSGTEVAGRPIRLDYSQ 474
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGT--AFVVYEDIYDAKTAV 74
+ + LYV NLP+++S+ ++ D+FG+ G + + I KD RG AFV +A+ AV
Sbjct: 84 IKKKLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIRGKDGRGKGYAFVTMASGEEAQAAV 143
Query: 75 DHLSGFNVANRYLIV 89
D ++ R L V
Sbjct: 144 DKFDTLELSGRILRV 158
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PP L++ +L F+++ +++Y+ FG++G ++ +R+ + +DT +G +V + + DA
Sbjct: 290 PP--AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 347
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
A+ ++G +A R + V +
Sbjct: 348 SAALKAMNGAEIAGRAIRVDF 368
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEE----MYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
A P +YV NLP +S ++ M+ IFG++G I + + RG A+VV+E
Sbjct: 14 APAPQNEGHTVYVNNLPEKVSQDDLKKAMHCIFGQFGKILDVVSRRTYRLRGQAWVVFEK 73
Query: 67 IYDAKTAVDHLSGFNVANRYL 87
DAK A+D + GF ++ L
Sbjct: 74 AEDAKNALDCMQGFPFLDKPL 94
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G R P N +L+V NLP + + +F ++ +++R+ +K G AFV Y D
Sbjct: 154 GQPRGP---NHILFVENLPGTANEAMVGMLFQQFTGFKEVRMVPAKP--GIAFVEYSDEG 208
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
A A+ L GF +A + + +
Sbjct: 209 QAGVAMQGLQGFKLATDKPMAISF 232
>gi|358380041|gb|EHK17720.1| hypothetical protein TRIVIDRAFT_42809 [Trichoderma virens Gv29-8]
Length = 746
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAV 74
++VRNLPF + E++ FG +G +R R+ K T GT FV + D DAKT +
Sbjct: 335 TVFVRNLPFTTTDEQLSSFFGHFGKVRYARVVIDKATEKPAGTGFVCFVDAADAKTCI 392
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 4 IPLRKGNARLPPEVNRVLYVRNLPFNI-SSEEMYDIFGKYGAIRQIRIGSSKDT-RGTAF 61
P R A PP L +RNLP++I +SE++ +F +G ++ + +K +G F
Sbjct: 136 TPGRGRQAYQPPPTK--LIIRNLPWSIKTSEQLSKLFISFGKVKFADLPQNKGKLKGFGF 193
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVST 121
V +A+ A++ ++G V R L V + + K DD+ AK E
Sbjct: 194 VTLRGRPNAEKALEAINGKVVDGRTLAVDWAVDKETWDKQQTTDGDDKEAKDAEDEDDKA 253
Query: 122 KDK 124
+DK
Sbjct: 254 EDK 256
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVY 64
R ++VR+LP N ++E + D F +Y ++ + +K++RG FV +
Sbjct: 43 RSIFVRSLPPNATNESLADFFSQYFPVKHATVVIDQKTKESRGFGFVSF 91
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I +I + +T +G F+ + D DAK A++ L
Sbjct: 254 LYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 313
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 314 NGFELAGRPMKV 325
>gi|294948928|ref|XP_002785965.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900073|gb|EER17761.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 229
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 5 PLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFV 62
PLR G P + R++YV NLP+ + +++ D+F + G + ++ I D +RG A V
Sbjct: 141 PLRVG----PRDKGRLIYVGNLPWRTAWQDLKDLFRECGEVIRVDIAEGWDGRSRGFATV 196
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIV 89
++E+I +A A++ + + R L+V
Sbjct: 197 LFEEIDNAANAIEKFNEYEFQGRKLLV 223
>gi|255953987|ref|XP_002567746.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589457|emb|CAP95601.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 249
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
A +PP N +YV+NL I +++ +IF +YG I +I ++ +G AF+V+++
Sbjct: 7 AGIPP--NATVYVKNLDERIKVDQLKHALEEIFSEYGTILEIVAKTNLKAKGQAFIVFDN 64
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
I A A++ ++GF++ + + VL Y +T ++ DEL
Sbjct: 65 IESATRAIEDINGFDLFEKPM-VLDYAKTPSDATVQRESGGDEL 107
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP + + E + IFG++ +++R+ + +G AFV YE A +
Sbjct: 170 LPP--NKILFLRELPDDATQEGLSAIFGRFEGFQEVRLVPGR--KGIAFVEYEAEAGAIS 225
Query: 73 AVDHLSGFNVAN--RYLIVLYYQQ 94
A + SG + + + + V Y +Q
Sbjct: 226 AKEATSGMPMGDQGKAIRVTYQRQ 249
>gi|444319050|ref|XP_004180182.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
gi|387513224|emb|CCH60663.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
Length = 420
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
L+VR PF++ E+ +IF +GA+++++I G AFV +E+ A A++ ++G
Sbjct: 109 LFVRPFPFDVQESELNEIFAPFGAMKEVKI-----LNGFAFVEFEEPESASKAIEEVNGK 163
Query: 81 NVANRYLIVLY 91
A++ L VL+
Sbjct: 164 TFADQPLEVLF 174
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R PE N L V L + + E+ + FG+YG I I + S +RG AF+ YE
Sbjct: 107 SRANPETNNCLGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSYESE 166
Query: 68 YDAKTAVDHLSGFNVANRYLIVLY 91
DA+ A D +G + R + V Y
Sbjct: 167 EDAREAKDRTNGMEIDGRRIRVDY 190
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ +T RG F+ + + DAK A++ L
Sbjct: 329 LYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAMEQL 388
Query: 78 SGFNVANRYLIVLY---YQQTKMSKKFDQKKKD 107
+GF +A R + V + +Q T D + D
Sbjct: 389 NGFELAGRPMKVGHVTEHQNTLFQPSLDSDELD 421
>gi|38541222|gb|AAH62832.1| Pabpc1a protein, partial [Danio rerio]
Length = 327
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ +IF KYG IR+ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQD 286
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKCKFEQMKQD 286
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I+++ +YD +G + ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFETREAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 IPLNDRKVFVGRFKSRK 177
>gi|392397594|ref|YP_006434195.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
gi|390528672|gb|AFM04402.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
Length = 97
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLP++IS EE+ +F + G + +I + ++T RG FV E D + A++ L
Sbjct: 3 LYVSNLPYSISEEELEAVFSELGVVTSTKIITDRETRRSRGFGFVEMESEEDGEAAIEEL 62
Query: 78 SGFNVANRYLIV 89
+G + R + V
Sbjct: 63 NGVELKGREIQV 74
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ D+F G ++ +R+ D TRG FV Y + +A+ A + L
Sbjct: 730 ILIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNSTRGFGFVEYTTVREAQAAFEALK 789
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKD 107
++ R+L++ + K S++ Q ++D
Sbjct: 790 HTHLLGRHLVLQWSHAAKDSREEVQMQRD 818
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L++RNLPF + +E+ F +G ++Q+ I K T +G AFV + D A A
Sbjct: 322 LFIRNLPFAANEDEIQAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAFRAK 381
Query: 78 SGFNVANRYLIVL 90
G R L +L
Sbjct: 382 DGSTFQGRLLHLL 394
>gi|156042414|ref|XP_001587764.1| hypothetical protein SS1G_11004 [Sclerotinia sclerotiorum 1980]
gi|154695391|gb|EDN95129.1| hypothetical protein SS1G_11004 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 464
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + Q I + +RGT V ++ +A TA
Sbjct: 361 ERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAENADTA 420
Query: 74 VDHLSGFNVANRYL 87
++ SG+ R L
Sbjct: 421 IEKFSGYQYGGRPL 434
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 21 LYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV NLP+ + +++ D+F + GA+ + +G +G+ V +E DA+ A+
Sbjct: 203 IYVSNLPYTVGWQDLKDLFRGAARNGAVVRADVHVGPDGRPKGSGIVAFESPDDARNAIQ 262
Query: 76 HLSGFNVANRYLIV 89
+G++ R L V
Sbjct: 263 QFNGYDWQGRPLEV 276
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ DT +G F+ + D AK A++ L
Sbjct: 144 LYVGSLHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQL 203
Query: 78 SGFNVANRYLIVLYYQQ 94
+GF +A R + V + +
Sbjct: 204 NGFELAGRPMKVGHVTE 220
>gi|384915859|ref|ZP_10016064.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
gi|384526721|emb|CCG91935.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
Length = 255
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV NLP+N++ ++++IF K G I+ + I + T+G FV D+ A+ AV L
Sbjct: 171 LYVGNLPYNLTDSDLFEIFAKVGPIKNVEIIRDRRTNRTKGFGFVEMADLDSARKAVTIL 230
Query: 78 SGFNVANRYLIV 89
+ V R +IV
Sbjct: 231 NRIEVMGRRIIV 242
>gi|378726083|gb|EHY52542.1| U2 small nuclear ribonucleoprotein B'' [Exophiala dermatitidis
NIH/UT8656]
Length = 200
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQI---RIGS-SKDTRGTAF 61
NA P N+ LYV+NL I+ E+ Y +F YG + I R+GS ++ RG A
Sbjct: 17 NAGTP---NQTLYVKNLNEKINKNELKRALYMLFSTYGPVLDIVTTRVGSKCQNMRGQAH 73
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
+VY DI + A+ L GF++ + ++++Y
Sbjct: 74 IVYRDIQTSTQAMRALQGFDLFGKEMVIVY 103
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 161 VYIKNFGEDMDDEHLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDVMN 220
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 221 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 254
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ + + IF +G I I++ + DT +G F+ + DAK A++ L
Sbjct: 282 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQL 341
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 342 NGFELAGRPMKV 353
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F ++G + +++ S +RG FV +E +A+ AV +++
Sbjct: 193 IYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+Q K+D
Sbjct: 253 GREVSGRLLYVGRAQKRVERQNELKRRFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A+ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I E++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|397620275|gb|EJK65638.1| hypothetical protein THAOC_13484 [Thalassiosira oceanica]
Length = 227
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y NLP ++ ++ I +YG I + + DT RG AFV YED AVD+
Sbjct: 36 VYAGNLPHALTEGDVLCILSQYGEIEDVNLVRDDDTGKSRGFAFVKYEDARSCVLAVDNF 95
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
+G V R L V + ++ K+ K +K++ E
Sbjct: 96 TGAQVLGRTLRVDHVERYKLPKHIREKEEQAE 127
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|220905282|ref|YP_002480594.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869581|gb|ACL49916.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 88
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTA 73
+++ +YV NLP++ + E++ D+F +YG + +++ S +DT RG FV ED +A +A
Sbjct: 1 MSKSIYVGNLPWSATEEQVQDLFAEYGNVLSVKLVSDRDTGRARGFGFVEMED-GEADSA 59
Query: 74 VDHLSGFNVANRYLIV 89
++ L F+ R L V
Sbjct: 60 IEALDNFSFGGRTLRV 75
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|392396499|ref|YP_006433100.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
gi|390527577|gb|AFM03307.1| RRM domain-containing RNA-binding protein [Flexibacter litoralis
DSM 6794]
Length = 95
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLP++IS EE+ +F + G + +I + ++T RG FV E D + A++ L
Sbjct: 3 LYVSNLPYSISEEELEAVFSELGVVTSTKIITDRETRRSRGFGFVEMESEEDGEAAIEEL 62
Query: 78 SGFNVANRYLIV 89
+G + +R + V
Sbjct: 63 NGIELKDREIQV 74
>gi|354547390|emb|CCE44125.1| hypothetical protein CPAR2_503495 [Candida parapsilosis]
Length = 98
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ V+N+ F S +++ F +YG I QIR + +G FV+Y D+ A++A L+G
Sbjct: 20 IVSVKNVSFTTSPTQLFSTFSQYGRIYQIR--HNPKEKGQYFVIYYDLPSAQSAAKELNG 77
Query: 80 FNVANRYLIVLYY 92
N+ RYL+ Y
Sbjct: 78 VNLDGRYLVTSIY 90
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
L VRNL F +++ IF +G +R + + G+ K RG AFV + D DA A D
Sbjct: 35 LLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQK-PRGFAFVEFYDPGDAAHARDR 93
Query: 77 LSGFNVANRYLIVLYYQQTK 96
L G+N+ R + VLY Q+ +
Sbjct: 94 LDGYNLDGRNISVLYAQEKR 113
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PP L++ +L F+++ +++Y+ FG++G ++ +R+ + +DT +G +V + + DA
Sbjct: 293 PP--AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 350
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
A+ ++G +A R + V +
Sbjct: 351 TAALKAMNGAEIAGRAIRVDF 371
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P + L++ NL FN + +YDIFG+YG + R+ + DT +G ++ + + +
Sbjct: 387 VPSAPSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDE 446
Query: 70 AKTAVDHLSGFNVANR 85
AK A++ L+G V R
Sbjct: 447 AKAALEALNGEYVEGR 462
>gi|242037019|ref|XP_002465904.1| hypothetical protein SORBIDRAFT_01g047890 [Sorghum bicolor]
gi|241919758|gb|EER92902.1| hypothetical protein SORBIDRAFT_01g047890 [Sorghum bicolor]
Length = 240
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTA 73
+RV+YV N+PF+ S +E+ D G +R +R+ + T RG AFV Y D A++A
Sbjct: 17 CSRVVYVGNIPFHASEKEVRDACELIGPVRSLRLAADPGTGKRRGYAFVEYPDDETARSA 76
Query: 74 VDHLSGFNVANRYLIV 89
+L G + R L V
Sbjct: 77 CRNLHGHALRGRELRV 92
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 824
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ +E+A ++ G
Sbjct: 825 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATNEMAALRNGGG 873
>gi|27803030|emb|CAD60733.1| unnamed protein product [Podospora anserina]
Length = 516
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQ--IRIGSSKDTRGTAFVVYEDI 67
NA E N ++YVRNLP++ S++++ ++F G + Q I+ S +RG+ V +++
Sbjct: 408 NATAGTEKNEIIYVRNLPWSTSNDDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRFDNA 467
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQ 93
A+TA++ G+ R L + Y +
Sbjct: 468 DTAETAINKFQGYQYGGRPLGLSYVK 493
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKY----GAIR-QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R ++V NLPFNI +++ D+F + G IR + +G +G+ VV+E DA+ A
Sbjct: 249 RQIFVSNLPFNIGWQDLKDLFRQSARTGGVIRADVHLGPDGRPKGSGIVVFESPDDARNA 308
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R + V
Sbjct: 309 IQQFNGYDWQGRVIEV 324
>gi|389742624|gb|EIM83810.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 973
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDA 70
PPE L+VRN+PF + +E+ +F +G +R RI +S +RGT F + + DA
Sbjct: 499 PPETGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITLDPASGRSRGTGFACFWNKEDA 558
Query: 71 KTAVDH 76
AVD
Sbjct: 559 DKAVDQ 564
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 824
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ +E+A ++ G
Sbjct: 825 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATNEMAALRNGGG 873
>gi|194883044|ref|XP_001975614.1| GG22415 [Drosophila erecta]
gi|190658801|gb|EDV56014.1| GG22415 [Drosophila erecta]
Length = 259
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFV 62
+R AR P+ R + V L N + ++ ++F KYG I +I++ ++ +RG F+
Sbjct: 79 MRMHKAREHPQATRCIGVFGLNTNTTQHKVRELFNKYGPIERIQMVIDAHTQRSRGFCFI 138
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIV 89
+E++ DA+ A D SG V R + V
Sbjct: 139 YFENLNDARVAKDSCSGIEVDGRRIRV 165
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 9 GNARLPPEVNRV-----LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGTA 60
GN LPP V+ LYV +L FN++ ++ +F +G + + R ++ ++G A
Sbjct: 120 GNLNLPPGVHAPHGAMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYA 179
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
FV Y+ DAK A++ + GF +A R L V
Sbjct: 180 FVQYKRPEDAKMALEQMDGFELAGRTLRV 208
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 VYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
G V R L V + + K+ D + +D LA + + + DK
Sbjct: 95 GGATVLGRVLRVDHVR----YKRRDDEGTEDNLANVDDNGEMRGSDK 137
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I +I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGR 65
Query: 78 SGFNV-ANRYLIVLYY 92
G+N NR + L +
Sbjct: 66 DGYNFDGNRLRVELAH 81
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ ++F KYG IR+ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + R + V Q Q ++ +KF+Q K+D
Sbjct: 253 GKELNGRQVYVGRAQKKGERQNELKRKFEQMKQD 286
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D++L ++ KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYG 215
>gi|157870504|ref|XP_001683802.1| putative RNA-binding protein, UPB1 [Leishmania major strain
Friedlin]
gi|68126869|emb|CAJ04738.1| putative RNA-binding protein, UPB1 [Leishmania major strain
Friedlin]
Length = 177
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F ++G I ++I ++TR G FV Y A+
Sbjct: 35 PEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQ 94
Query: 72 TAVDHLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKM 113
AV+ L+GFN+ N+ L + L + + ++ + + A M
Sbjct: 95 QAVNELNGFNILNKRLKVALAASGNQRQRNYNPHQNANPAANM 137
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ + + D+F ++G + +++ S +RG FV +E +A+ AV +++
Sbjct: 193 IYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+Q K+D
Sbjct: 253 GREVSGRLLYVGRAQKRVERQNELKRRFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A+ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I E++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|392561824|gb|EIW55005.1| hypothetical protein TRAVEDRAFT_130662 [Trametes versicolor
FP-101664 SS1]
Length = 428
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRG 58
++ +P R G P+ R LYV LPF+++ E +IFG++GA+ I ++ D +R
Sbjct: 90 LSDVP-RSGRGPKQPDTRRNLYVLGLPFDLTKTEFAEIFGRFGAVAHAVILATVDNASRR 148
Query: 59 TAFVVYEDIYDAKTAVDHLS 78
F+V +DAK A++ L+
Sbjct: 149 RGFIVMARHHDAKVAMEGLN 168
>gi|119472580|ref|XP_001258373.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119406525|gb|EAW16476.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 463
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
R LYV NLPFN+ +++ D+F + GA+ + ++ +G+ V +E DA+ A+
Sbjct: 206 RQLYVSNLPFNVGWQDLKDLFRQAGAVIRADVHTDATGRPKGSGIVAFESPEDARNAIQQ 265
Query: 77 LSGFNVANRYLIV 89
+G++ R L V
Sbjct: 266 FNGYDWQGRTLEV 278
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ ++++ D+F G + +I+ + +RGT V +++ A+TA
Sbjct: 357 EKSPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNAETAETA 416
Query: 74 VDHLSGFNVANRYLIVLY 91
+ +G+ R L + +
Sbjct: 417 IAKFTGYQYGGRPLGITF 434
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLPF S +E+ D+F +YG + ++R+ + +DT RG FV DA A++ L
Sbjct: 5 IYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAPA-DADAAIEAL 63
Query: 78 SGFNVANRYLIVLYYQQTK 96
+G + R L + Q+ +
Sbjct: 64 NGTELDGRALRINEAQERQ 82
>gi|302511081|ref|XP_003017492.1| hypothetical protein ARB_04373 [Arthroderma benhamiae CBS 112371]
gi|291181063|gb|EFE36847.1| hypothetical protein ARB_04373 [Arthroderma benhamiae CBS 112371]
Length = 240
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 21 LYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
+ VRNL I E++ +IF +YG+I +I ++ +G AF+V++++ A A+D
Sbjct: 1 MLVRNLEERIKVEQLKEALTEIFSEYGSILEIVAKTNLKAKGQAFIVFDNVDSATRAIDE 60
Query: 77 LSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
++GF + + + VL Y +TK ++ D+EL
Sbjct: 61 VNGFELFEKPM-VLEYAKTKSDATVMREGGDEEL 93
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R LP ++ + IFG++ +++R+ + +G AFV YE+ A +
Sbjct: 161 LPP--NKILFLRELPETYDADGLSAIFGRFPGFKEVRMVPGR--KGIAFVEYENESGAIS 216
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + SG + N I + YQ+
Sbjct: 217 AKEATSGMALGENEKPIKVTYQR 239
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 824
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ +E+A ++ G
Sbjct: 825 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATNEMAALRNGGG 873
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 129 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 188
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 189 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 222
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 37 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 96
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 97 MLLNDRKVFVGRFKSRK 113
>gi|388515725|gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLP + ++ + D+F YG I + + + +T RG +V+ E I AK+A+ L
Sbjct: 104 IYVCNLPRSCNAAHLLDLFKPYGTIISVEVSRNAETGESRGCGYVIMESINSAKSAIAAL 163
Query: 78 SGFNVANRYLIVLYYQQTKMSK 99
G +V R L V + + + +
Sbjct: 164 DGSDVGGRELRVKFSVEMSLER 185
>gi|380494672|emb|CCF32976.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 204
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 10 NARLPPEV-----NRVLYVRNLPFN-ISSE----EMYDIFGKYGAIRQIRIGSSKDTRGT 59
NA LP +V N+ LYV NLP N I + E+Y +F YG + I + RG
Sbjct: 13 NASLPAKVATISPNQTLYVTNLPSNKIQKQDLRTELYLLFSTYGPVLDIVALKTMKMRGQ 72
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
A + + D+ A A+ L GF R L + Y K K D +AK+ Y
Sbjct: 73 AHITFRDVQTATQAMRSLEGFEFLGRPLTIQYA-----------KSKSDFVAKLDGTY 119
>gi|157870506|ref|XP_001683803.1| putative RNA-binding protein, UPB2 [Leishmania major strain
Friedlin]
gi|68126870|emb|CAJ04748.1| putative RNA-binding protein, UPB2 [Leishmania major strain
Friedlin]
Length = 167
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F ++G I ++I ++TR G FV Y A+
Sbjct: 25 PEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQ 84
Query: 72 TAVDHLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKM 113
AV+ L+GFN+ N+ L + L + + ++ + + A M
Sbjct: 85 QAVNELNGFNILNKRLKVALAASGNQRQRNYNPHQNANPAANM 127
>gi|317029441|ref|XP_001391597.2| U2 snRNP component ist3 [Aspergillus niger CBS 513.88]
Length = 280
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 15/112 (13%)
Query: 13 LPPEVN--------RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAF 61
+PPE + +Y+ LP+++S ++ IF +YG I + K+T RG AF
Sbjct: 19 IPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAF 78
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
+ YED AVD+L G V R L V + + K+ D +++ D +AK+
Sbjct: 79 LKYEDQRSTDLAVDNLGGATVLGRVLRVDHVRY----KRRDDEEETDNVAKL 126
>gi|134076074|emb|CAK39433.1| unnamed protein product [Aspergillus niger]
Length = 289
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LP+++S ++ IF +YG I + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPYDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G V R L V + + K+ D +++ D +AK+
Sbjct: 95 GGATVLGRVLRVDHVRY----KRRDDEEETDNVAKL 126
>gi|162605986|ref|XP_001713508.1| polyadenylate-binding protein [Guillardia theta]
gi|13794428|gb|AAK39803.1|AF165818_11 polyadenylate-binding protein [Guillardia theta]
Length = 389
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+++NLP+N S ++++ +F +YG I +I+ + + G FV Y+++ DA +A+++L+
Sbjct: 97 LFIKNLPYNFSPKDLHSLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAINNLN 156
Query: 79 GFNVANRYLIVLYY 92
G ++N+ + V ++
Sbjct: 157 GKLISNKMITVKHF 170
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEE-MYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAVDHL 77
+YV+NLP + SE+ ++++FG +G I I I ++ +G A++ +E+ DA+ A+ +
Sbjct: 188 IYVKNLPVDKLSEKVIFNLFGVFGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAIITM 247
Query: 78 SGFNVANRYLIVL 90
+ +A + LIV
Sbjct: 248 NNRKIAGKSLIVC 260
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I +I + +T +G F+ + D DAK A++ L
Sbjct: 242 LYVGSLHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 301
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 302 NGFELAGRPMKV 313
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 262 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 321
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 322 KKALDALQGEYIDNR 336
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 264 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 323
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 324 KKALDALQGEYIDNR 338
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 266 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 325
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 326 KKALDALQGEYIDNR 340
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 824
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ +E+A ++ G
Sbjct: 825 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATNEMAALRNGGG 873
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 824
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ +E+A ++ G
Sbjct: 825 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATNEMAALRNGGG 873
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 84 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 143
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 144 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 177
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + D+F ++G + +++ S +RG FV +E +A+ AV ++
Sbjct: 193 IYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L V Q Q ++ ++F+ K+D
Sbjct: 253 GMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQD 286
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIR-IGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I + + +RG FV +E A+ A+ ++G
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAISTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I E++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
+ + L V Q+ + K + L+ M+
Sbjct: 356 RIIGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I +I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 65
Query: 78 SGFNV-ANRYLIVLYY 92
G+N NR + L +
Sbjct: 66 DGYNFDGNRLRVELAH 81
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D L
Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLH 824
Query: 79 GFNVANRYLIVLYYQQ---------TKMSKKFDQKKKDDELAKMQEKYG 118
G ++ R L++ Y ++ +M+KK ++ +E+A ++ G
Sbjct: 825 GVHLLGRRLVMQYAEEDAVDAEEEIARMTKKVRKQVATNEMAALRNGGG 873
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 264 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 323
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 324 KKALDALQGEYIDNR 338
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 262 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 321
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 322 KKALDALQGEYIDNR 336
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF S +E+ +F YG +R +R+ D +RG F + DA A++ L
Sbjct: 707 IIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASSRGFGFAEFTTKRDAVNAMNALK 766
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
++ R L++ + + ++ D +K EL KMQ+K G
Sbjct: 767 NTHLLGRRLVLAFAE----AESDDPEK---ELEKMQQKVGA 800
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIYDA 70
LY+RNL + ++ +E+ + F K+GA+ ++ + K +G AFV +++ DA
Sbjct: 303 LYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADGKGKGFAFVQFQNPNDA 355
>gi|169599889|ref|XP_001793367.1| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
gi|160705342|gb|EAT89501.2| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
Length = 328
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + +YVRNLP++ S+E++ ++F G + +I+ + +RGT V +E DA+TA
Sbjct: 224 EPSSTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKQEDAETA 283
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMS 98
+ +G+ R L + + + T S
Sbjct: 284 IAKFTGYQYGGRPLGLQFVKYTNQS 308
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTA 73
R +Y+ NLP+N+ +++ D+F G++ + + + D R G+ V +E + DA+ A
Sbjct: 59 RQVYIANLPYNVGWQDLKDLFRQAAHTGSVLRADVHVAPDGRPKGSGIVAFETVDDARNA 118
Query: 74 VDHLSGFNVANRYLIV 89
++ +G+ R L V
Sbjct: 119 INQFNGYEWQGRNLEV 134
>gi|354545262|emb|CCE41989.1| hypothetical protein CPAR2_805380 [Candida parapsilosis]
Length = 454
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTA 73
E N +YV NLPF+ +++++D+F G + I +D R G A V +E + A T+
Sbjct: 370 EPNDTIYVENLPFSTQNDDLFDLFETIGKVSNAEIQYQEDGRASGNAVVQFESVDSATTS 429
Query: 74 VDHLSGFNVANRYLIVLY 91
++ L+G+ R L + Y
Sbjct: 430 LNELNGYEYGGRKLKISY 447
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQ--IRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
++V NLPF+I+ + + DI K G++ + +R+ +RG VV+E +A AV+
Sbjct: 258 VFVGNLPFSINWQALKDIMRKAGSVTRADVRLDHMGRSRGFGTVVFETPEEADAAVEMFQ 317
Query: 79 GFNVANRYL 87
G+ + R L
Sbjct: 318 GYEIEGRKL 326
>gi|317150456|ref|XP_001824039.2| U1 small nuclear ribonucleoprotein usp102 [Aspergillus oryzae
RIB40]
Length = 251
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 13 LPPEVNRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N +YVRNL + E + +IF +YG + I ++ +G AF+V++ +
Sbjct: 11 IPP--NSTVYVRNLEERVKVDQLKEALEEIFSEYGNVIDIVAKTNLKAKGQAFIVFDSVE 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
A A+D ++GF + ++ + VL + +T+ ++ +DEL
Sbjct: 69 SASNAIDEINGFELFDKPM-VLDFAKTRSDATVLREGGEDEL 109
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R+LP E + +FG++ +++R+ + +G AFV YE+ A +
Sbjct: 172 LPP--NKILFLRDLPDTADQESLTAVFGRFEGFQEVRLVPGR--KGIAFVEYENESGAIS 227
Query: 73 AVDHLSGFNV--ANRYLIVLYYQQ 94
A + SG + + + + V Y +Q
Sbjct: 228 AKEATSGMPMGESGKPIRVTYQRQ 251
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV +ED DA A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 65
Query: 78 SGFNVANRYLIV 89
G++ +L V
Sbjct: 66 DGYDFDGHHLRV 77
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F S+++++ +F +YG + I I K D+RG AFV Y+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYAD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
+A+ A+D L G NV R ++V +
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQF 91
>gi|331225259|ref|XP_003325300.1| hypothetical protein PGTG_07133 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304290|gb|EFP80881.1| hypothetical protein PGTG_07133 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 141
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAKTAV 74
N+ ++V N+P NI++E ++ F +G IR I+I + S++ R AF+ ++D +A A+
Sbjct: 8 NKTIFVGNIPPNINAEALHSSFSPFGNIRDIQIPTDPQSRNNRNFAFITFQDQIEALDAI 67
Query: 75 DHL 77
D++
Sbjct: 68 DNM 70
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 208 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 267
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 268 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 301
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 116 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 175
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 176 MLLNDRKVFVGRFKSRK 192
>gi|452988237|gb|EME87992.1| hypothetical protein MYCFIDRAFT_192265 [Pseudocercospora fijiensis
CIRAD86]
Length = 310
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I + KDT RG F+ YED AVD+L
Sbjct: 35 VYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIVLY 91
SG V R + V +
Sbjct: 95 SGAGVMGRVISVDH 108
>gi|402574395|ref|YP_006623738.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
meridiei DSM 13257]
gi|402255592|gb|AFQ45867.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
meridiei DSM 13257]
Length = 83
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
LYV NLP+N ++EE+ F +YG + RI + ++T RG F+ ED+ DA +
Sbjct: 4 TLYVGNLPWNTTAEELGQFFSEYGQVESSRIITDRETGRSRGFGFIEVEDM-DAARMAEE 62
Query: 77 LSGFNVANRYLIV 89
L+G + R L V
Sbjct: 63 LNGKDFGGRPLTV 75
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + ++F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
LYV+NL +I +++ F YG I ++ + ++G FV + +A AV ++G
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQ 114
V + L V Q+ + K + L+ M+
Sbjct: 356 RIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMR 390
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDHL 77
L+VRNLP+ + EE+ + F KYG + ++ + KDTR G A++ Y AK A++ L
Sbjct: 293 LFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEEL 352
Query: 78 SGFNVANRYLIVLYYQQTK----------MSKKFDQKKKDDE 109
R L V+ + K +SK F QKK+++E
Sbjct: 353 DNSIFQGRLLHVMPAELKKTLEKPEXVPLLSKSF-QKKREEE 393
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK 54
N +L V+NLP+ S E+ ++FGK+G++ +I + S+K
Sbjct: 483 NHILLVKNLPYGSSQGELANMFGKFGSVDKIILPSTK 519
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS-KDTRGTAFVVYEDIYDAKTAVDHLSG 79
L VRN+ F + +++ +F YG I+ +R+ RG AFV + +A+ A LS
Sbjct: 705 LLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEFVTKQEAQNAFQALSN 764
Query: 80 FNVANRYLIV 89
++ R+L++
Sbjct: 765 THLYGRHLVL 774
>gi|115462171|ref|NP_001054685.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|122169518|sp|Q0DKM4.1|RU1A_ORYSJ RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|384950745|sp|A2Y0J7.1|RU1A_ORYSI RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|113578236|dbj|BAF16599.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|125550898|gb|EAY96607.1| hypothetical protein OsI_18512 [Oryza sativa Indica Group]
gi|222630249|gb|EEE62381.1| hypothetical protein OsJ_17170 [Oryza sativa Japonica Group]
Length = 253
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 1 MATIPLRKGNARLPPEV---NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
++ +P + PE+ N +L+V+NLP + + +F +Y +++R+ +K
Sbjct: 158 LSQLPFAGAQKVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKP-- 215
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVA--NRYLI 88
G AFV Y D A A++HL GF + N+ LI
Sbjct: 216 GIAFVEYGDEGQATAAMNHLQGFKITKDNQMLI 248
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
PP N +Y+ NL I EE+ +F ++G I + + +G A+VV+ED+
Sbjct: 20 PP--NVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVAS 77
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
A A+ + F N+ + + Y
Sbjct: 78 ATEALKSMQDFPFHNKPMRIQY 99
>gi|440634763|gb|ELR04682.1| hypothetical protein GMDG_01540 [Geomyces destructans 20631-21]
Length = 256
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGA---IRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I +R + +++G AF+ YED AVD+L
Sbjct: 35 IYIGGLPFQLSEGDIITIFSQYGEPTFINLVRDKETGESKGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQ 103
G + NR L V + + K ++ D+
Sbjct: 95 GGTKIMNRVLRVDHTRYKKQDEEPDK 120
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N E++++ F KYG + ++ SS D +RG FV YED A+ A D +
Sbjct: 195 VYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGKSRGFGFVCYEDPDAAERACDDMH 254
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKK 105
++ + L V Q QT++ +KF+Q K
Sbjct: 255 AKDMNGKTLFVGRAQKRNERQTELRRKFEQMK 286
>gi|339898461|ref|XP_003392595.1| RNA-binding protein, putative, UPB1 [Leishmania infantum JPCM5]
gi|321398349|emb|CBZ08764.1| RNA-binding protein, putative, UPB1 [Leishmania infantum JPCM5]
Length = 233
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F ++G I ++I ++TR G FV Y A+
Sbjct: 91 PEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQ 150
Query: 72 TAVDHLSGFNVANRYL-IVLYYQQTKMSKKFDQKKKDDELAKM 113
AV+ L+GFN+ N+ L + L + + ++ ++ + A M
Sbjct: 151 QAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNANPAANM 193
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
R+ +R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDA 124
Query: 71 KTAVDHLSGFNV-ANRYLIVLYYQQTKMSKKFDQ 103
+ A+ G+N NR + L + S F+
Sbjct: 125 EDAIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN 158
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 14 PPEVNR---VLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
P + NR LY+ +L +NI+ E + IF +G I I++ ++ ++G FV Y +
Sbjct: 170 PTQQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANS 229
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DAK A+D L+GF +A R + V
Sbjct: 230 DDAKKALDQLNGFELAGRPMKV 251
>gi|331252664|ref|XP_003338866.1| hypothetical protein PGTG_20403 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309317856|gb|EFP94447.1| hypothetical protein PGTG_20403 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 141
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAKTAV 74
N+ ++V N+P NI++E ++ F +G IR I+I + S++ R AF+ ++D +A A+
Sbjct: 8 NKTIFVGNIPPNINAEALHSSFSPFGNIRDIQIPTDPQSRNNRNFAFITFQDQIEALDAI 67
Query: 75 DHL 77
D++
Sbjct: 68 DNM 70
>gi|154338656|ref|XP_001565550.1| RNA-binding protein, putative, UPB1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062602|emb|CAM39044.1| RNA-binding protein, putative, UPB1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 169
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F +YG I ++I ++TR G FV Y A+
Sbjct: 25 PEALRNLMVNYIPTTVDEMQLRQLFERYGPIETVKIVCDRETRQSRGYGFVKYCSAASAQ 84
Query: 72 TAVDHLSGFNVANRYLIV 89
AV+ L+GFN+ N+ L V
Sbjct: 85 QAVNELNGFNILNKRLKV 102
>gi|443895118|dbj|GAC72464.1| signal peptidase complex subunit [Pseudozyma antarctica T-34]
Length = 913
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF ++ +++ D+F G ++ +R+ D TRG FV Y + +A+ A + L
Sbjct: 778 ILIKNLPFEVTKKDIRDLFASQGQLKSVRLPKKFDNTTRGFGFVEYTTVREAQAAFEALK 837
Query: 79 GFNVANRYLIVLYYQQ 94
++ R+L++ + +Q
Sbjct: 838 HTHLLGRHLVLQWSKQ 853
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|392395169|ref|YP_006431771.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390526247|gb|AFM01978.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 116
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
LYV NLP+N +SE++ FG+YG + RI + ++T RG FV ED DA +
Sbjct: 36 TLYVGNLPWNTTSEDLSSFFGQYGQVISSRIITDRETGRSRGFGFVEVED-EDATRMAED 94
Query: 77 LSGFNVANRYLIV 89
L+G + R L V
Sbjct: 95 LNGKDFGGRPLTV 107
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|407041791|gb|EKE40955.1| RNA recognition motif domain containing protein [Entamoeba
nuttalli P19]
Length = 379
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R+L+VRN+ FN + E + +F KYG I+ ++ + RG AF+ + DI DA A + L
Sbjct: 25 SRILFVRNICFNTNEESIKKLFEKYGEIK--KVFCQIENRGIAFITFYDIRDAIKAHEEL 82
Query: 78 SGFNVANRYLIVLY 91
+ + R + + Y
Sbjct: 83 NKKEIGGRPIKIHY 96
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V NL F+++++++ +F +G I + + S +GTA+V ++D+ A+ A+D ++
Sbjct: 387 LFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDPSGLRKGTAYVQFKDVKSAQMALDAMA 446
Query: 79 GFNVANRYLIVLYYQQ 94
GF++A R + V Q+
Sbjct: 447 GFDLAGRLIKVQTIQE 462
>gi|67471417|ref|XP_651660.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56468428|gb|EAL46274.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449709320|gb|EMD48605.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 379
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
R+L+VRN+ FN + E + +F KYG I+ ++ + RG AF+ + DI DA A + L+
Sbjct: 26 RILFVRNICFNTNEESIKKLFEKYGEIK--KVFCQIENRGIAFITFYDIRDAIKAHEELN 83
Query: 79 GFNVANRYLIVLY 91
+ R + + Y
Sbjct: 84 KKEIGGRPIKIHY 96
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|410904228|ref|XP_003965594.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Takifugu
rubripes]
Length = 227
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+YV NLP ++ ++ D+F KYG IR+I + +++ T AF+ +ED DA AV +G+
Sbjct: 6 IYVGNLPMDVQERDIEDLFYKYGKIREIELKNNRGTIPFAFIRFEDPRDADDAVYGRNGY 65
Query: 81 NVANRYLIVLYYQQT 95
+ L V Y + T
Sbjct: 66 VYGDSKLRVEYPRST 80
>gi|328850075|gb|EGF99245.1| hypothetical protein MELLADRAFT_79511 [Melampsora larici-populina
98AG31]
Length = 834
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 10 NARL-PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS---KDTRGTAFVVYE 65
N+RL P L +RNL F I+ +++ FGK+G I+ I + + T+G FV
Sbjct: 301 NSRLGPKHSGGRLIIRNLSFEITEDDLRYTFGKFGQIQSIELPKDPIHQKTKGFGFVWMV 360
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
+ DA+ A+ L+G +++ + L +T+ KK ++K++ E A E Y +
Sbjct: 361 NYIDAENAMKALNGQTLSSGIVQELIRNETEGEKKSLKRKREKEEATEDELYNI 414
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF S +E+ +F YG +R +R+ D +RG F + DA A++ L
Sbjct: 707 IIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASSRGFGFAEFTTKRDAVNAMNALK 766
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
++ R L++ + + ++ D +K EL KMQ+K G
Sbjct: 767 NTHLLGRRLVLAFAE----AESDDPEK---ELEKMQQKVGA 800
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK-DTRGT--AFVVYEDIYDA 70
LY+RNL + ++ +E+ + F K+GA+ ++ + K D++G AFV +++ DA
Sbjct: 303 LYLRNLHYEVTEDEIREQFSKHGALEEVHVPLKKADSKGKGFAFVQFQNPNDA 355
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMSKKFDQKKKDDELA 111
+ +R + V ++ QK+++ EL
Sbjct: 161 MLLNDRKVFVGRFK--------SQKEREAELG 184
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|340054373|emb|CCC48668.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 177
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 5 PLRKGNARLPPEVNRV---LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRG 58
P + + +PP+++ L+V LPF + +YD+F YG + I I G ++ ++G
Sbjct: 44 PAKAYDPSVPPQLSPTAAKLFVGQLPFESDEKRLYDLFSAYGTVEHIHILRDGQNR-SKG 102
Query: 59 TAFVVYEDIYDAKTAVDHLSGFNVANRY 86
AFV Y ++ A TA+ F + NRY
Sbjct: 103 AAFVTYSNVEGADTAI-----FTLHNRY 125
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKRVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+V NLP +++Y++F YG + + I +T RG FV + +A+TA++ L
Sbjct: 136 LFVCNLPRRCDVDDLYELFKPYGTVLSVEISRDPETGLSRGCGFVTMRSLPEARTAMNAL 195
Query: 78 SGFNVANRYLIV 89
GF++ R ++V
Sbjct: 196 DGFDLDGREMLV 207
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVD 75
N LY++NL NI E++ ++F +YG I ++ S+ +RG+ FV ++ DA A+
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 76 HLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
++G V ++ L V Q +K+D AK+Q ++
Sbjct: 376 EMNGKMVGSKPLYVALAQ-----------RKEDRKAKLQAQF 406
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
++++NL +I ++ +YD F +G I +I + S ++RG FV +E A++A+D L+
Sbjct: 125 IFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLN 184
Query: 79 GFNVANRYLIVLYY----------QQTKMS----KKFDQKKKDDELAKMQEKYGVST 121
G + ++ + V + K S K DDEL +M KYG T
Sbjct: 185 GMLINDKKVFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTIT 241
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ +E+ ++FGKYG I + D +R FV +E+ A AV L+
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Query: 79 G 79
G
Sbjct: 276 G 276
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV +L ++ +++D+F + G + +R+ +S+ + G A+V Y + DA A++ L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
+ + + + ++Y + S+K
Sbjct: 97 NFTPINGKPIRIMYSNRDPSSRK 119
>gi|326469216|gb|EGD93225.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326479280|gb|EGE03290.1| U2 snRNP component IST3 [Trichophyton equinum CBS 127.97]
Length = 276
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
G V R L V + + K+ D + +D L + E + D+
Sbjct: 95 GGATVLGRVLRVDHVR----YKRRDDEGTEDNLVNVDENGEMMESDR 137
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|391339259|ref|XP_003743969.1| PREDICTED: uncharacterized protein LOC100902788 [Metaseiulus
occidentalis]
Length = 322
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y + F+++ ++ IF +YG I I + K+T RG F+ YED A+D+
Sbjct: 39 IYFGGVSFDLTEGDLLCIFSQYGEIVNINLVRDKETGKSRGFGFICYEDQRSTILAIDNF 98
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
+G + NR V + + K K D+ DEL KM + G +
Sbjct: 99 NGAKICNRTFRVDHVENYKPPKDSDEY---DELTKMLHEKGCA 138
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ ++FG +G I+ R+ D RG AFV + + +A+ A++ L
Sbjct: 718 IIIKNLPFEATRKDIIELFGAFGQIKSARVPKKFDRSARGFAFVEFSLLKEAENAMNQLE 777
Query: 79 GFNVANRYLIVLY 91
G ++ R L++ Y
Sbjct: 778 GVHLLGRRLVMDY 790
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|358340305|dbj|GAA48228.1| U2 small nuclear ribonucleoprotein B'' [Clonorchis sinensis]
Length = 225
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 18 NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N LYV NL + ++ Y +FG++G + I + RG AF++Y+D+ A TA
Sbjct: 6 NHTLYVNNLNDKVKKADLRKALYYLFGQHGRLLDIIAMKTMKMRGQAFIIYQDVQSATTA 65
Query: 74 VDHLSGFNVANRYLIVLY 91
+ L GFN+ R + + Y
Sbjct: 66 LRSLQGFNLFQRPMRIAY 83
>gi|348676634|gb|EGZ16451.1| hypothetical protein PHYSODRAFT_314245 [Phytophthora sojae]
Length = 449
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYD 69
P ++ R LY+ NL +++ E++ F +GAI I + G+S+ ++G F+ YED+
Sbjct: 115 PNDLARRLYIGNLYYDLKEEDIRSAFAPFGAIHSIDLSLEPGASR-SKGFCFLEYEDVLA 173
Query: 70 AKTAVDHLSGFNVANRYLIV 89
A++AV L+G +ANR + V
Sbjct: 174 AESAVQVLNGTPLANRAMRV 193
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS-----SKDTRGTAFVVYEDIYDAKTA 73
+ +Y+ N+ ++S+ + IF +GAIR + + S RG F+ + + A +A
Sbjct: 220 KCIYIANVRVELNSQHLESIFSPFGAIRSSVMAAVSPLESGVHRGYGFMEFVEESCAASA 279
Query: 74 VDHLSGFNVANRYLIV 89
+ H++GF +A + L V
Sbjct: 280 IQHMNGFELAGQPLKV 295
>gi|409074598|gb|EKM74992.1| hypothetical protein AGABI1DRAFT_47085, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 777
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PPEV L+VRN+PF + +E+ +F +G +R RI DT RGT F + ++ DA
Sbjct: 379 PPEVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDLDTGRSRGTGFACFWNLEDA 438
Query: 71 KTAVDH 76
++
Sbjct: 439 DKVIEQ 444
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYD 69
P +R L VRNLPF+I+ +++ +F YG I +I I GS T+G AFV D
Sbjct: 223 PSHASR-LIVRNLPFDITEQDLRAVFLPYGPIHEIHIPGVEGSKTRTKGFAFVWMLSKPD 281
Query: 70 AKTAVDHLSG 79
A+ A++ +G
Sbjct: 282 AERAIEGCNG 291
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
LYV N+ F+I+ ++ +FG +G +R Q++ + +RG FV Y D +A+ A++ ++
Sbjct: 314 LYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREALEKMN 373
Query: 79 GFNVANRYLIV 89
GF++A R + V
Sbjct: 374 GFDLAGRPIRV 384
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---R 57
M TIP + PP+ +V +V ++P + +E+ +IF K+G+I I I K T R
Sbjct: 1 MQTIP----QSFSPPQGFKV-FVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPR 55
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK- 116
G AF+ Y +A A++ + N N+Y+ M+K K D+E+ KM+ K
Sbjct: 56 GCAFISYGTKEEADNAINTM---NATNQYI-------GDMNKPLQVKYSDNEIEKMERKL 105
Query: 117 ----YGVSTKDK 124
G S +D+
Sbjct: 106 FVGMLGTSNEDQ 117
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A+ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIKKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|354557963|ref|ZP_08977220.1| RNP-1 like RNA-binding protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353549637|gb|EHC19078.1| RNP-1 like RNA-binding protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 84
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTA 73
+++ LYV NLP+N ++E++ FG+YG + RI + ++T RG FV ED DA+
Sbjct: 1 MSKTLYVGNLPWNTTTEDLTSFFGQYGEVVSSRIITDRETGRSRGFGFVEVEDD-DAERM 59
Query: 74 VDHLSGFNVANRYLIV 89
L+G + R L V
Sbjct: 60 AQDLNGKDFGGRPLTV 75
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF++S ++ IF +YG I + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G V R L V + + KK D+ + + +AK+
Sbjct: 95 GGATVLGRVLRVDHTR----YKKRDEDEDTNNVAKL 126
>gi|440471739|gb|ELQ40692.1| hypothetical protein OOU_Y34scaffold00378g4 [Magnaporthe oryzae
Y34]
Length = 522
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR--IGSSKDTRGTAFVVYE 65
+G ARL R++ + L N++ + + DIFG+YG IR + I RGTA+++Y
Sbjct: 279 QGEARLICSGFRLIVIERLTKNVTEDHLRDIFGQYGEIRDLDLPINRQGTNRGTAYILYV 338
Query: 66 DIYDAKTAVDHL 77
DA++A+ H+
Sbjct: 339 QEPDAESAIAHM 350
>gi|255553401|ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223543140|gb|EEF44674.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 233
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 2 ATIPLRKGN----ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
T P R+GN PP N +L+++NLP +S + +F +Y R++R+ +K
Sbjct: 140 GTAPFRQGNRGEQEAAPP--NNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKP-- 195
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
G AFV +ED + A+ L F + + + + Y
Sbjct: 196 GIAFVEFEDDVQSSMAMQALQSFKITPQNPMAITY 230
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N+ +Y++NL + EE+ Y +F +YG I + + RG A+V + ++
Sbjct: 6 IPP--NQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFSEVM 63
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
A AV + GF ++ + + Y
Sbjct: 64 AASNAVRQMQGFPFYDKPMRIQY 86
>gi|154338654|ref|XP_001565549.1| RNA-binding protein, putative, UPB2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062601|emb|CAM39043.1| RNA-binding protein, putative, UPB2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 168
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAK 71
PE R L V +P + ++ +F +YG I ++I ++TR G FV Y A+
Sbjct: 24 PEALRNLMVNYIPTTVDEMQLRQLFERYGPIETVKIVCDRETRQSRGYGFVKYCSAASAQ 83
Query: 72 TAVDHLSGFNVANRYLIV 89
AV+ L+GFN+ N+ L V
Sbjct: 84 QAVNELNGFNILNKRLKV 101
>gi|303272661|ref|XP_003055692.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463666|gb|EEH60944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 438
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 5 PLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAF 61
PL A+ PP ++VR+LP + S + +++ K+G +R R+ K T +GTAF
Sbjct: 155 PLPGKGAKTPPPAGASVFVRDLPTDASKQSLFERMQKFGKVRSCRVVLDKTTGRSKGTAF 214
Query: 62 VVYEDIYDAKTAVDHL-----SGFNVANRYL 87
V + D A A++ G VA R L
Sbjct: 215 VDFVDAASASRAIEAAGKVEGGGVKVAGRRL 245
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
LYV +L +NI+ + IF +G I I++ D ++G F+ + D DAK A+D L
Sbjct: 307 LYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQL 366
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 367 NGFELAGRPMKV 378
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LY+ L +N ++ D+FGKYG + ++ I ++T RG AFV ++ DA+ A+D
Sbjct: 7 LYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDGC 66
Query: 78 SGFNVANRYLIV 89
+G +V R + V
Sbjct: 67 NGQDVNGRQITV 78
>gi|308459492|ref|XP_003092065.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
gi|308254397|gb|EFO98349.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
Length = 112
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
NR +YV NLPF+ + +E++D+F G I+ I + +K G AFV ++ A AV +L
Sbjct: 16 NRQVYVGNLPFDATEQELHDVFSVMGPIKNIWL--AKRPPGFAFVTFKRTVHAYDAVKYL 73
Query: 78 SGFNVAN 84
+G + N
Sbjct: 74 NGKKICN 80
>gi|308452462|ref|XP_003089055.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
gi|308243476|gb|EFO87428.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
Length = 116
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
NR +YV NLPF+ + +E++D+F G I+ I + +K G AFV ++ A AV +L
Sbjct: 16 NRQVYVGNLPFDATEKELHDVFSVMGPIKNIWL--AKRPPGFAFVTFKRTVHAYDAVKYL 73
Query: 78 SGFNVAN 84
+G + N
Sbjct: 74 NGTKICN 80
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 13/102 (12%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVD 75
N LY++NL NI E++ ++F +YG I ++ S+ +RG+ FV ++ DA A+
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 76 HLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
++G V ++ L V Q +K+D AK+Q ++
Sbjct: 376 EMNGKMVGSKPLYVALAQ-----------RKEDRKAKLQAQF 406
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
++++NL +I ++ +YD F +G I +I + S ++RG FV +E A++A+D L+
Sbjct: 125 IFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLN 184
Query: 79 GFNVANRYLIVLYY----------QQTKMS----KKFDQKKKDDELAKMQEKYGVST 121
G + ++ + V + K S K DDEL +M KYG T
Sbjct: 185 GMLINDKKVFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMFGKYGTIT 241
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NL ++ +E+ ++FGKYG I + D +R FV +E+ A AV L+
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Query: 79 G 79
G
Sbjct: 276 G 276
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV +L ++ +++D+F + G + +R+ +S+ + G A+V Y + DA A++ L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
+ + + + ++Y + S+K
Sbjct: 97 NFTPINGKPIRIMYSNRDPSSRK 119
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV+NLP ++ + + ++F ++G + +++ +S +R FV +E +A+ AV H++
Sbjct: 193 IYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G V+ R L Q Q ++ ++F+Q K+D
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQD 286
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ + +RG FV +E A+ A++ ++G
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V +++ +
Sbjct: 161 MLLNDRKVFVGHFKSRR 177
>gi|255941010|ref|XP_002561274.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585897|emb|CAP93632.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 835
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG F + +A+ A+D L
Sbjct: 715 IIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHSARGFGFADFVSAREAENAMDALK 774
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + + ++ELA++++K G
Sbjct: 775 NTHLLGRRLVLEFVNEETVD-------PEEELARLEKKVG 807
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
L++RNL ++ + ++ IF ++G I +I + S ++G A+V Y D A A L
Sbjct: 314 LFLRNLAYDTTESDLQPIFERFGKIEEIHVAFDTRSTTSKGFAYVQYCDADAAVDAYQTL 373
Query: 78 SGFNVANRYLIVL 90
G + R L +L
Sbjct: 374 DGKHFQGRLLHIL 386
>gi|347841226|emb|CCD55798.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + Q I + +RGT V ++ +A TA
Sbjct: 220 ERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAENADTA 279
Query: 74 VDHLSGFNVANRYL 87
++ SG+ R L
Sbjct: 280 IEKFSGYQYGGRPL 293
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV NLP+ + +++ D+F + GA+ + +G +G+ V +E DA+ A
Sbjct: 59 RQIYVSNLPYTVGWQDLKDLFRGAARNGAVVRADVHVGPDGRPKGSGIVAFESPDDARNA 118
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 119 IQQFNGYDWQGRPLEV 134
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 102 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 161
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 162 KKALDALQGEYIDNR 176
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 10 NARLPPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK--DTRGTAFVVYE 65
+ R PP + + L + NL + SE + F KYG I + I K ++RG AFV +
Sbjct: 2 SGRPPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKYGESRGFAFVRFH 61
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMS 98
D DA A+D L G ++ R + V Y + + S
Sbjct: 62 DKRDAGDAIDQLDGRDIDGREIRVDYARHERPS 94
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 10 NARLPPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK--DTRGTAFVVYE 65
+ R PP + + L + NL + SE + F KYG I + I K ++RG AFV +
Sbjct: 2 SGRPPPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKYGESRGFAFVRFH 61
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMS 98
D DA A+D L G ++ R + V Y + + S
Sbjct: 62 DKRDAGDAIDQLDGRDIDGREIRVDYARHERPS 94
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L++ NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 146 GQDTMPP--NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKP--GIAFVEYEDDV 201
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
+ A+ L GF + + +V+ +
Sbjct: 202 QSSMAMQALQGFKITPQNPMVVSF 225
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ ++F KYG IR+ + S ++G FV +E DA+ AVD ++
Sbjct: 180 VYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMN 239
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + R + V Q Q ++ +KF+Q K+D
Sbjct: 240 GKELNGRQVYVGRAQKKGERQNELKRKFEQMKQD 273
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 88 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 147
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D++L ++ KYG
Sbjct: 148 MLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYG 202
>gi|302892801|ref|XP_003045282.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
gi|256726207|gb|EEU39569.1| hypothetical protein NECHADRAFT_43518 [Nectria haematococca mpVI
77-13-4]
Length = 718
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAV 74
L++RNLPF + E++ FG +G +R R+ K T GT FV + D+ DAK +
Sbjct: 322 TLFIRNLPFTTTDEQLKGFFGHFGKVRYARVVMDKVTEKPAGTGFVCFFDVEDAKNCI 379
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKT 72
E R L+VR+LP + ++E + D F ++ ++ + +K++RG FV + D DA
Sbjct: 40 EERRSLFVRSLPPSATNETLTDFFSQHYPVKHATVVVDQKTKESRGYGFVTFADADDATE 99
Query: 73 AVDHLSGFNVANRYLIV 89
A L R L +
Sbjct: 100 AKKALHNQEWDGRRLRI 116
>gi|451848678|gb|EMD61983.1| hypothetical protein COCSADRAFT_192065 [Cochliobolus sativus
ND90Pr]
Length = 178
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 22/119 (18%)
Query: 10 NARLPPEV-------NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRG 58
+AR PP NR LYVRNLP + +++ Y +F YG I I + RG
Sbjct: 4 SARGPPGTVASEGIPNRTLYVRNLPDKLQKDDLKRSLYMLFATYGVILDIVALKTMKMRG 63
Query: 59 TAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
A VV+ DI + A+ L GF + + + Y K K D +AK+ Y
Sbjct: 64 QAHVVFRDIDSSTQAMRALQGFTFFGKDMQIAYA-----------KTKSDTVAKLDGTY 111
>gi|410082555|ref|XP_003958856.1| hypothetical protein KAFR_0H03110 [Kazachstania africana CBS 2517]
gi|372465445|emb|CCF59721.1| hypothetical protein KAFR_0H03110 [Kazachstania africana CBS 2517]
Length = 441
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E N +Y NLPF+ ++YD+F G + ++R S+ G A + YE+I DA
Sbjct: 360 ERNNFIYCSNLPFSTDRSDLYDLFETIGKVINAELRYDSANQPTGVAVIEYENIEDADVC 419
Query: 74 VDHLSGFNVANRYLIVLY 91
++ L+ +N L++ Y
Sbjct: 420 IERLNNYNYGGCDLVISY 437
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
++V NLPF+++ + + D+F G + + + +RG V++ + D + A+D +
Sbjct: 244 IFVANLPFSVNWQALKDMFKPCGNVLRADVELDHVGRSRGFGTVLFSNQEDMRRAIDDYN 303
Query: 79 GFNVANRYLIVLY-YQQTKMSKK--FDQKKKDDELAKMQ 114
G+ + R L V Y+ ++ + D+ KD + Q
Sbjct: 304 GYEIEGRRLDVREGYRNSRNGNRNGADETNKDSNETEAQ 342
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L VRN+PF S +++ ++F + ++ +RI + D RG AFV + +AKTA D L
Sbjct: 763 LVVRNVPFEASKKDIKELFSSFAQVKSVRIPTKYDGQHRGFAFVDFLTKQEAKTAYDTLG 822
Query: 79 GFNVANRYLIVLYYQ 93
++ R+L++ + Q
Sbjct: 823 ATHLYGRHLVLEWAQ 837
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N V+ V+N+P+ E++ + FGK+G + +I + +K A V + + +AK A L
Sbjct: 520 NTVILVKNIPYTTEEEDLIETFGKFGTLGRIILPPAK---TIALVEFTERNEAKAAFRKL 576
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKK 105
+ N L + + Q +++FD +K
Sbjct: 577 AYSKFKNIPLYLQWASQGIFTQEFDAEK 604
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAV 74
L V+NLP+NI+ E + + F K G + +++ ++KD R FV ++ A++A+
Sbjct: 3 LIVKNLPYNITPERLKNHFSKKGQVTDVKLATTKDGVFRCFGFVGFKTQEQAESAL 58
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 13 LPP-----EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVY 64
LPP + R++ VRNL + S E++ ++F +G I ++ I +K ++G AF++Y
Sbjct: 329 LPPAELIADTGRIM-VRNLTYLCSPEDIEELFKPFGPISEVHIPIDRETKKSKGYAFIMY 387
Query: 65 ---EDIYDAKTAVDH 76
E+ +A T +D+
Sbjct: 388 LMPENAVNAYTTLDN 402
>gi|317449041|emb|CBX45938.1| Transformer-2 [Bradysia coprophila]
Length = 246
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 6 LRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFV 62
R R P+ +R L V L + +++ IF KYG+I +++ S+ +RG FV
Sbjct: 102 WRHVGTREKPKKSRCLGVFGLSVYTTKDQIIQIFSKYGSIEHVQVVVDASTGRSRGFCFV 161
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
++ DA A DH +G + NR + V Y
Sbjct: 162 YFDRTEDATVARDHCTGMEIDNRRIRVDY 190
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF++S ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDLSEGDIITIFSQYGEPVHVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
+G V R L V + + KK ++++D +AK+
Sbjct: 95 TGATVLGRVLRVDHAR----YKKRGNEEEEDNVAKL 126
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
LYV+NL +++ + +++F +G I I + +RG FV +E DAK AVD L+
Sbjct: 201 LYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDALN 260
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVS 120
G+ + +R L V Q KK Q + D EK+ S
Sbjct: 261 GYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKAS 302
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
R L+V+NLP++I+ EE+ ++F + IR I +GS+ +RG A++ ++ A+ ++
Sbjct: 362 RTLFVKNLPYSITQEELQEVFEQATDIR-IPMGSNGSSRGIAYLEFKSEAIAEKTMEEAQ 420
Query: 79 GFNVANRYLIVLY 91
G +V R +I+ +
Sbjct: 421 GSDVQGRSIIIDF 433
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
R+G +R + N++L V NL F+ + E + +F K +IR + ++ +G AF+ +E
Sbjct: 439 RQG-SRTVGQANKILVVNNLSFSANEESLQSVFEKAVSIRVPQ--NNGRPKGFAFLEFES 495
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQ 93
+ DAK A+++ + + R + + + Q
Sbjct: 496 VEDAKEALENCNNTEIEGRSIRLEFSQ 522
>gi|224034387|gb|ACN36269.1| unknown [Zea mays]
gi|413944623|gb|AFW77272.1| hypothetical protein ZEAMMB73_456532 [Zea mays]
Length = 254
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 1 MATIPLRKGNARLPPEV---NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
+ IP+ G + PE+ N +L+V+NLP + + +F +Y +++R+ +K
Sbjct: 159 LTQIPIAGGQRVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAKP-- 216
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
G AFV Y D A A+++L F + +V+ Y
Sbjct: 217 GIAFVEYGDETQATAAMNNLQSFKITKENQMVITY 251
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N +Y+ NL I EE+ +F ++G I + + +G A+VV+ED+
Sbjct: 18 IPP--NVTIYINNLNEKIKLEELKKSLTAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVA 75
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
A A+ + GF ++ + + Y
Sbjct: 76 SATEALKRMQGFPFYDKTMRIQY 98
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L++ NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 147 GQDTMPP--NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKP--GIAFVEYEDDV 202
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
+ A+ L GF + + +V+ +
Sbjct: 203 QSSMAMQALQGFKITPQNPMVVSF 226
>gi|116195978|ref|XP_001223801.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88180500|gb|EAQ87968.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 247
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP NR+L+V+NLP + + + IFG++ R++R + G AFV YE A T
Sbjct: 168 LPP--NRILFVQNLPDDFDKDALNAIFGRFEGFREVRTVPGRS--GIAFVEYEAEAGAIT 223
Query: 73 AVDHLSGFNVAN--RYLIVLYYQQ 94
A ++ +G + N + + V Y +Q
Sbjct: 224 AKENTAGMPLKNGEKMMKVTYQRQ 247
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 20 VLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YVRNL + E + + +F +YG + I ++ +G AFVV++ A+ A++
Sbjct: 9 TVYVRNLEERVKPEPLKEALRALFSEYGNVIDIVAKTNLKAKGQAFVVFDKPESAQAAIE 68
Query: 76 HLSGFNVANRYLIVLYYQ--------QTKMSKKFDQKKK 106
+ GF + ++ + + + QT ++FD K+
Sbjct: 69 DIHGFELFDKPMQLALARTRSDATVMQTGNEEEFDAHKR 107
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVY 64
G AR P R L+V NLP +++ +F +G + + I +T RGTAFV
Sbjct: 113 SGWARQWPR-PRELFVCNLPRRCDVQDLLQLFTPHGTVLSVEISRDAETGISRGTAFVTM 171
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIV 89
+ +A+TA++ L GF + R + V
Sbjct: 172 RSLAEARTAINALDGFELDGREVFV 196
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
++V LP++++ ++ +F +YG I + + K T +G AF+ YED AVD+L
Sbjct: 36 IFVGGLPYDLTEGDVLCVFSQYGEIVNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNL 95
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
+G + + L V + Q + K+ D K DDE ++
Sbjct: 96 NGIKLVGKTLRVDHVQDYRPPKETD--KTDDETRQL 129
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++NL ++ E + D+FG++G +++ + S ++G FV +E DA+ AV+ ++
Sbjct: 193 VYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ KF Q K+D
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQD 286
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I S+ +YD F +G I ++ ++ ++G FV +E +A+ A++ ++G
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 80 FNVANRYLIV 89
+ + + V
Sbjct: 161 MFLNDHKVFV 170
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV +ED DA A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 65
Query: 78 SGFNVANRYLIV 89
G++ +L V
Sbjct: 66 DGYDFDGHHLRV 77
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGKYG +++ + + ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDDMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A+D ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D+ L +M KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYG 215
>gi|357110649|ref|XP_003557129.1| PREDICTED: RNA-binding protein 28-like [Brachypodium distachyon]
Length = 958
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
+ VRNLPF I+ +E+ D+F G + + I D ++G AFV + DA+ A+ ++
Sbjct: 283 VIVRNLPFKITLKEIMDVFSSEGFVWDVSIPQKSDDGKSKGFAFVSFTRKQDAENAIKNV 342
Query: 78 SGFNVANRYLIVLYYQQTK---MSKKFDQKKKDDELAKMQEK 116
+G +A R + V + ++ K D KDDELA + +K
Sbjct: 343 NGKVIAKRTVAVDWAVPKNVYAVAAKSDA--KDDELADVSDK 382
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
++V NLP+ S ++ +F + G +R+ + +SK + RG FV + + DA+ A+
Sbjct: 34 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSDTSRGFGFVQFATVQDAERAIQQ 93
Query: 77 LSGFNVANRYLIV-LYYQQTKMSKKFDQKK---------KDDE 109
+G+ VA R + V L Q+ + ++ +K+ KDDE
Sbjct: 94 KNGYTVAGRKIRVKLAIQRAPLKERLQKKENVQAEDSNPKDDE 136
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 65
Query: 78 SGFNV-ANRYLIVLYYQQTKMSKKFDQ 103
G+N NR + L + S F+
Sbjct: 66 DGYNFDGNRLRVELAHGGRGNSSSFNN 92
>gi|219670337|ref|YP_002460772.1| RNP-1 like RNA-binding protein [Desulfitobacterium hafniense
DCB-2]
gi|219540597|gb|ACL22336.1| RNP-1 like RNA-binding protein [Desulfitobacterium hafniense
DCB-2]
Length = 83
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
LYV NLP+N +SE++ FG+YG + RI + ++T RG FV ED DA +
Sbjct: 3 TLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVED-EDAARMAED 61
Query: 77 LSGFNVANRYLIV 89
L+G + R L V
Sbjct: 62 LNGKDFGGRPLTV 74
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 8 KGNARLPP---EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFV 62
+GN P E + VLY+ NL + ++ +++ +F ++G I +R+ + +RG A+V
Sbjct: 122 RGNRERTPKNIEPHNVLYIGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNRGLSRGFAYV 181
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLY----YQQTK 96
Y+++ DA+ A+D+L R L+V Y YQ TK
Sbjct: 182 EYKNVSDAQAAIDNLDMQVFEGRNLVVQYHSPKYQTTK 219
>gi|423076693|ref|ZP_17065401.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
gi|361852256|gb|EHL04522.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
Length = 112
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
LYV NLP+N +SE++ FG+YG + RI + ++T RG FV ED DA +
Sbjct: 32 TLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVED-EDAARMAED 90
Query: 77 LSGFNVANRYLIV 89
L+G + R L V
Sbjct: 91 LNGKDFGGRPLTV 103
>gi|326519426|dbj|BAJ96712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 992
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
++V NLP+ S ++ +F + G +R+ + +SK + +G FV + + DA+ A+
Sbjct: 46 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 105
Query: 77 LSGFNVANRYLIV-LYYQQTKMSKKFDQKKK---DDELAKMQEK 116
+GF VA R + V L Q+ + ++ +K+ DD AK +E+
Sbjct: 106 KNGFAVAGRKIRVKLAIQRAPLKERLQKKESVQADDSSAKDEEE 149
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD---TRGTAFVVYEDIYDAKTAVDHL 77
+ VRNLPF ++ +E+ DIF + + I D ++G AF+ + DA+ A+ ++
Sbjct: 299 VIVRNLPFKVTIKEIMDIFSCEAFVWDVSIPQKSDDGKSKGFAFLSFTRKQDAENAIKNV 358
Query: 78 SGFNVANRYLIVLY 91
+G +A R + V +
Sbjct: 359 NGKVIAKRTVAVDW 372
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEM---YDIFGKYGAIRQIRIGSSKDTRG 58
+T+P K N + ++R +++ NLPF+IS+EE+ + +FGK + + +K RG
Sbjct: 540 STVPSLKPN-KEDTGLDRTIFISNLPFDISNEEVTERFSVFGKVQSFFPVLHKLTKRPRG 598
Query: 59 TAFVVY 64
T F+ +
Sbjct: 599 TGFLKF 604
>gi|158292878|ref|XP_314164.4| AGAP005249-PA [Anopheles gambiae str. PEST]
gi|157017199|gb|EAA09490.4| AGAP005249-PA [Anopheles gambiae str. PEST]
Length = 862
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI-----GSSKDT-RGTA 60
RKG + + VRN+PF S++E+ D+F +G I+ +R+ S+ DT RG
Sbjct: 700 RKGAKGAQKQTGCKILVRNIPFQASAKEVRDLFKPFGDIKSLRLPKKMAASADDTHRGFC 759
Query: 61 FVVYEDIYDAKTAVDHL 77
FV Y++ DAK A D L
Sbjct: 760 FVEYDEESDAKRAFDTL 776
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++NL ++ E + D+FG++G +++ + S ++G FV +E DA+ AV+ ++
Sbjct: 193 VYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ KF Q K+D
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQD 286
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I S+ +YD F +G I ++ ++ ++G FV +E +A+ A++ ++G
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 80 FNVANRYLIV 89
+ + + V
Sbjct: 161 MFLNDHKVFV 170
>gi|346324388|gb|EGX93985.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 284
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PP +RV++V N+P+ +S E++ DIF G + + R+ +T +G F Y D A
Sbjct: 5 PP--SRVVFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDSETGRPKGFGFAEYPDTDSA 62
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMS 98
+AV +L+ + + R L V + + K S
Sbjct: 63 SSAVRNLNDYEIMGRKLRVDFSHEQKAS 90
>gi|167379859|ref|XP_001735309.1| polyadenylate-binding protein, cytoplasmic and nuclear [Entamoeba
dispar SAW760]
gi|165902764|gb|EDR28498.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba dispar SAW760]
Length = 379
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R+L+VRN+ FN + E + +F KYG I+ ++ + RG AFV + DI DA A + L
Sbjct: 25 SRILFVRNISFNANEESIRKLFEKYGEIK--KVFCQIENRGIAFVTFYDIRDAIKAHEEL 82
Query: 78 SGFNVANRYLIVLY 91
+ + R + + Y
Sbjct: 83 NKKEIDGRPIKIHY 96
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L++ NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 118 GQDTMPP--NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKP--GIAFVEYEDDV 173
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
+ A+ L GF + + +V+ +
Sbjct: 174 QSSMAMQALQGFKITPQNPMVVSF 197
>gi|145249558|ref|XP_001401118.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus niger CBS
513.88]
gi|134081800|emb|CAK42056.1| unnamed protein product [Aspergillus niger]
gi|350639553|gb|EHA27907.1| hypothetical protein ASPNIDRAFT_201684 [Aspergillus niger ATCC
1015]
Length = 389
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--------GSSKDTRGTAFVVYEDIYDA 70
+ L+V L +++ ++ FG++G I +IRI GS K RG AF+VYE D
Sbjct: 102 KTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDM 161
Query: 71 KTAVDHLSGFNVANRYLIV 89
K A G + +R ++V
Sbjct: 162 KAAYKETDGIRIKDRRVLV 180
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGA---IRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + IR + +RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDISEGDIVTIFSQYGEPVHVNLIRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
G V R L V + + KK+DDE
Sbjct: 95 GGATVLGRILRVDHAR---------YKKRDDE 117
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 5 PLRKGNARLPPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAI------RQIRIGSSKDT 56
P +GN PP + + L V N+P+N S +++ IF KYG + R +R G +
Sbjct: 13 PGMRGNG--PPNIEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTG---EP 67
Query: 57 RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
RG AFV + D DA A+D + G A R L + Y ++ +
Sbjct: 68 RGFAFVRFMDQRDADDAIDRMDGEFFAGRELRIQYAKKRR 107
>gi|212534622|ref|XP_002147467.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210069866|gb|EEA23956.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 267
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF++S ++ IF +YG + + KDT +G AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLIRDKDTGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDD 108
G V R VL T+ +K ++ ++D+
Sbjct: 95 GGATVMGR---VLRVDHTRYKRKEEEGEEDN 122
>gi|406865361|gb|EKD18403.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 820
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG +G +R +R+ D TRG AF + +A+ A++ L
Sbjct: 698 IIIKNLPFQATKQDVRGLFGAFGELRSVRVPKKFDHSTRGFAFANFITAREAENALEALK 757
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
++ R L++ + D ++E+AKM+++ G
Sbjct: 758 DTHLLGRRLVLEFAAD-------DAVDAEEEIAKMEKRTGA 791
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYD 69
+P E + L+V N+ F+ + + + ++F +YG+I+ +R+ + +DT +G +V I D
Sbjct: 102 VPKEPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDD 161
Query: 70 AKTAVDHLSGFNVANRYLIVLY 91
AK A + L G +A R + + Y
Sbjct: 162 AKVAFEALQGAEIAGRSIRLDY 183
>gi|440474273|gb|ELQ43025.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae Y34]
gi|440485469|gb|ELQ65427.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae P131]
Length = 831
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
L+VRNLP++ + +++ +FG +G + +I + G ++G AF+ Y + A A L
Sbjct: 314 LFVRNLPYSATEDDLKSVFGAFGPLDEIHLSHAGREGTSKGIAFIQYSESSSAVDAFQKL 373
Query: 78 SGFNVANRYLIVLYYQQTKM 97
G + R L VL Q ++
Sbjct: 374 DGCDFQGRILHVLPGQAKRV 393
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + +++ +FG YG +R +R+ + + TRG AF + +A+ A++ L
Sbjct: 709 IVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFENRTRGFAFAEFTTPKEAENALNALK 768
Query: 79 GFNVANRYLIV 89
++ R L++
Sbjct: 769 NTHLLGRKLVL 779
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 213 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 272
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 273 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 306
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 121 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 180
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D+ L ++ K+G
Sbjct: 181 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFG 235
>gi|195431461|ref|XP_002063759.1| GK15735 [Drosophila willistoni]
gi|194159844|gb|EDW74745.1| GK15735 [Drosophila willistoni]
Length = 277
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAK 71
P+ +R + V L N + ++ ++F K+G I +I++ + +RG F+ YE++ DA+
Sbjct: 100 PQASRCIGVFGLNTNTTQHQVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYYENLSDAR 159
Query: 72 TAVDHLSGFNVANRYLIVLY 91
A D SG V +R + V Y
Sbjct: 160 VAKDACSGIKVDDRRIRVDY 179
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF + +++ +FG YG +R +R+ D RG F + +A+ A+D L
Sbjct: 715 IIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHTARGFGFADFVSAREAENAMDALK 774
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + + ++ELA++++K G
Sbjct: 775 NTHLLGRRLVLEFVNEEAVD-------PEEELARLEKKVG 807
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
L++RNL ++ + ++ IF ++G I +I I S ++G A+V Y A A +L
Sbjct: 314 LFLRNLAYDTTESDLQPIFERFGNIEEIHIAFDTRSTTSKGFAYVQYSLADAAIDAYRNL 373
Query: 78 SGFNVANRYLIVL 90
G + R L +L
Sbjct: 374 DGKHFQGRLLHIL 386
>gi|358374136|dbj|GAA90730.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus kawachii IFO
4308]
Length = 390
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--------GSSKDTRGTAFVVYEDIYDA 70
+ L+V L +++ ++ FG++G I +IRI GS K RG AF+VYE D
Sbjct: 102 KTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDIVTPKGSKKPHRGYAFIVYEREKDM 161
Query: 71 KTAVDHLSGFNVANRYLIV 89
K A G + +R ++V
Sbjct: 162 KAAYKETDGIRIKDRRVLV 180
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
+R LYV NLP +I E+ D+F KYG I I + G F+ +ED DA+ A+
Sbjct: 5 ASRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRG 64
Query: 77 LSGFNV-ANRYLIVLYYQQTKMSKKFDQ 103
G+N NR + L + S D+
Sbjct: 65 RDGYNFDGNRLRVELAHGGRGQSSTNDR 92
>gi|301107420|ref|XP_002902792.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097910|gb|EEY55962.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1005
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKD---TRGTAFVVYEDIYDAKTA 73
++VRNLPF ++ EE+ +F + G +R+I + G K TRG AFV + DA A
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVRKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAAVA 63
Query: 74 VDHLSGFNVANRYLIV 89
V+ L+ + R +++
Sbjct: 64 VEKLNKTDFQGRKMLI 79
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 21 LYVRNLPFNISS---EEMYDIFGKYGAIRQIRIGSSKDT-------------------RG 58
L VRNL F + E+++++ G +R +R+ +DT RG
Sbjct: 351 LIVRNLAFQTTDTDLEKLFEVHGPLFEVRVVRMPVEEDTKESEEADGETNAEPVLGRSRG 410
Query: 59 TAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELA 111
FV Y D+ DA+ AV+ L+G + R +IV + +K +Q+KK +E A
Sbjct: 411 FGFVQYRDVADARAAVEKLNGTKLKGREMIVDFA--LSKTKYLEQQKKHEEEA 461
>gi|451998492|gb|EMD90956.1| hypothetical protein COCHEDRAFT_1137201 [Cochliobolus
heterostrophus C5]
Length = 178
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Query: 10 NARLPPEV-------NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRG 58
+AR PP NR LYVRNLP + +++ Y +F YG I +I + RG
Sbjct: 4 SARGPPGTVASEGIPNRTLYVRNLPDKLQKDDLKRSLYMLFATYGVILEIVALKTMKMRG 63
Query: 59 TAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
A VV+ D+ + A+ L GF + + + Y K K D +AK+ Y
Sbjct: 64 QAHVVFRDVDASTQAMRALQGFTFFGKDMQIAYA-----------KTKSDTVAKLDGTY 111
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAV 74
+R+ ++ N+P+ +S E++ DIF K G + R+ +DT +G F Y D A +AV
Sbjct: 8 SRIAFIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADAEIAASAV 67
Query: 75 DHLSGFNVANRYLIV 89
+L F + R L V
Sbjct: 68 RNLDNFEIMGRKLRV 82
>gi|159462614|ref|XP_001689537.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283525|gb|EDP09275.1| predicted protein [Chlamydomonas reinhardtii]
Length = 73
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 23 VRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHLSG 79
V N+P++++ + + D+F + GAI+ +R+ + KDT +G F Y D+ A++AV +L+
Sbjct: 1 VGNIPYDVTEQMLQDMFSQVGAIKSLRMVTDKDTGKPKGYGFCEYHDVGTAQSAVRNLNK 60
Query: 80 FNVANRYLIV 89
+ V R L V
Sbjct: 61 YEVNGRMLRV 70
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E ++ F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I+++ +YD +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGQFKSRK 177
>gi|242790685|ref|XP_002481602.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718190|gb|EED17610.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF++S ++ IF +YG + + KDT +G AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKD 107
G V R VL T+ +K ++++D
Sbjct: 95 GGATVMGR---VLRVDHTRYKRKDGEEEED 121
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
R+ +R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDA 124
Query: 71 KTAVDHLSGFNV-ANRYLIVLYYQQTKMSKKFDQ 103
+ A+ G+N NR + L + S F+
Sbjct: 125 EDAIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN 158
>gi|403358967|gb|EJY79143.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 479
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
++VL + NLP N+ ++ +FG YG + +++I +K R TA + +EDI AKTA
Sbjct: 363 HTSKVLILSNLPVNVHPHLLFKLFGIYGNVLRVKILFNK--RETALIEFEDINQAKTAKQ 420
Query: 76 HLSG 79
L+G
Sbjct: 421 FLNG 424
>gi|367006043|ref|XP_003687753.1| hypothetical protein TPHA_0K01870 [Tetrapisispora phaffii CBS 4417]
gi|357526058|emb|CCE65319.1| hypothetical protein TPHA_0K01870 [Tetrapisispora phaffii CBS 4417]
Length = 289
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 9 GNARL---PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFV 62
GNA + PP +RV+Y+ ++P++ + E++ D+ G + +++ T +G AFV
Sbjct: 5 GNAGVQNNPP--SRVIYIGSIPYDQTEEQILDLCSNVGPVVNLKMMFDPQTGRSKGYAFV 62
Query: 63 VYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDD 108
Y+D+ + +AV +L+G+ V +R L Y + +S D+
Sbjct: 63 EYKDLETSASAVRNLNGYQVGSRLLKCGYSSNSDISGSAGNDNNDN 108
>gi|389632927|ref|XP_003714116.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
gi|351646449|gb|EHA54309.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
Length = 867
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
L+VRNLP++ + +++ +FG +G + +I + G ++G AF+ Y + A A L
Sbjct: 350 LFVRNLPYSATEDDLKSVFGAFGPLDEIHLSHAGREGTSKGIAFIQYSESSSAVDAFQKL 409
Query: 78 SGFNVANRYLIVLYYQ 93
G + R L VL Q
Sbjct: 410 DGCDFQGRILHVLPGQ 425
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + +++ +FG YG +R +R+ + + TRG AF + +A+ A++ L
Sbjct: 745 IVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFENRTRGFAFAEFTTPKEAENALNALK 804
Query: 79 GFNVANRYLIV 89
++ R L++
Sbjct: 805 NTHLLGRKLVL 815
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
+YV NLP +I ++++ D+F KYGAIR I + + + AFV +ED DA+ AV G+
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGY 77
Query: 81 N 81
+
Sbjct: 78 D 78
>gi|348671204|gb|EGZ11025.1| hypothetical protein PHYSODRAFT_304700 [Phytophthora sojae]
Length = 987
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKD---TRGTAFVVYEDIYDAKTA 73
++VRNLPF ++ EE+ +F + G +++I + G K TRG AFV + DA A
Sbjct: 4 VFVRNLPFGVTQEELEHVFSEIGPVKKIDVIKDKGKRKSEMLTRGFAFVKFAVESDAAVA 63
Query: 74 VDHLSGFNVANRYLIVLY 91
V+ L+ + R +++ Y
Sbjct: 64 VEKLNKTDFQGRKMLIDY 81
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 25/114 (21%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI-----------------GSSKD------TR 57
L VRNL F + +++ +F +G + ++R+ G SK +R
Sbjct: 334 LIVRNLAFQTTDKDLEKLFEVHGPLFEVRVVRMPVEEDKKKSEEGADGESKAEPVLGRSR 393
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELA 111
G FV Y D+ DA+ AV+ L+G + R +IV + +K +Q+KK +E A
Sbjct: 394 GFGFVQYRDVADARAAVEKLNGTKLKGREMIVDFA--LSKNKYLEQQKKQEEEA 445
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDA 70
R+ +R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDA 124
Query: 71 KTAVDHLSGFNV-ANRYLIVLYYQQTKMSKKFDQ 103
+ A+ G+N NR + L + S F+
Sbjct: 125 EDAIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN 158
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV ++D DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 15/112 (13%)
Query: 13 LPPEVN--------RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAF 61
+PPE + +Y+ LPF++S ++ IF +YG + + K+T +G AF
Sbjct: 19 IPPEASWHADYRDTAYIYIGGLPFDLSEGDVIAIFSQYGEPVHVNLVRDKETGKSKGFAF 78
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
+ YED AVD+L G V R L V + + K+ D +++ D +AK+
Sbjct: 79 LKYEDQRSTDLAVDNLGGATVMGRLLRVDHARY----KRKDDEEEQDNVAKL 126
>gi|146183888|ref|XP_001027266.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|146143436|gb|EAS07024.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 247
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 13 LPPEVNRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
LPP N +Y+ NL IS +E++ +F +YG+I +I+ + RG AFVV+E I
Sbjct: 28 LPP--NNTIYINNLNERISIDDLKQELFKLFSEYGSILEIKAKKNIRMRGQAFVVFEQIA 85
Query: 69 DAKTAVDHLS 78
A+ A++ L+
Sbjct: 86 CAQKAIEALN 95
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTA 60
+A PL + P + L++ NLP N ++E + F + +++R+ K A
Sbjct: 160 LAAQPLVQNTIIQP---HHTLFLENLPINSNTEVIKAFFATFPGFKEVRLVPQKRV---A 213
Query: 61 FVVYEDIYDAKTAVDHLSGFNVANRYLIVLY 91
FV YED A A+ L F + ++ + Y
Sbjct: 214 FVEYEDENKATAALASLQSFKIGDQTVTANY 244
>gi|403370184|gb|EJY84954.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 734
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+VL + NLP N+ ++ +FG YG + +++I +K R TA + +EDI AKTA L+
Sbjct: 621 KVLILSNLPVNVHPHLLFKLFGIYGNVLRVKILFNK--RETALIEFEDINQAKTAKQFLN 678
Query: 79 G 79
G
Sbjct: 679 G 679
>gi|242086969|ref|XP_002439317.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
gi|241944602|gb|EES17747.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
Length = 259
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 1 MATIPLRKGNARLPPEV---NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR 57
+ IP+ G + PE+ N +L+V+NLP + + +F +Y +++R+ +K
Sbjct: 164 LTQIPIAGGQRVIMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKP-- 221
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
G AFV Y D A A+++L F + +V+ Y
Sbjct: 222 GIAFVEYGDEGQATAAMNNLQSFKITKENQMVITY 256
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 18 NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N +Y+ NL I EE+ +F ++G I + + +G A+VV+ED+ A A
Sbjct: 28 NVTIYINNLNEKIKLEELKKSLTAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATEA 87
Query: 74 VDHLSGFNVANRYLIVLY 91
+ + GF ++ + + Y
Sbjct: 88 LKRMQGFPFYDKTMRIQY 105
>gi|242786438|ref|XP_002480805.1| U1 small nuclear ribonucleoprotein A, putative [Talaromyces
stipitatus ATCC 10500]
gi|218720952|gb|EED20371.1| U1 small nuclear ribonucleoprotein A, putative [Talaromyces
stipitatus ATCC 10500]
Length = 180
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVV 63
+ NA+ N+ LY++NLP I ++ Y +F YG + + + + RG A +V
Sbjct: 12 QANAKNVGAPNQTLYIKNLPDKIRKPDLRMALYMLFSTYGPVLDVVVMRTAKMRGQAHIV 71
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLY 91
Y DI + A+ L GF+ R L ++Y
Sbjct: 72 YRDIQASTQAMRALQGFDFFGRELAIVY 99
>gi|68484767|ref|XP_713695.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
gi|68484858|ref|XP_713650.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435157|gb|EAK94545.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435204|gb|EAK94591.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
Length = 353
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LY+ N+P+N++++++ IF +YG I + SSK RG F+ Y + A+D+
Sbjct: 128 LYIGNIPYNLTTKDLIIIFSQYGIPTHINLIKDKESSKHHRGFGFLKYANFKSCILAIDN 187
Query: 77 LSGFNVANRYLIV 89
+G + +RYL V
Sbjct: 188 FNGIKLGDRYLKV 200
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|238599871|ref|XP_002394997.1| hypothetical protein MPER_05028 [Moniliophthora perniciosa FA553]
gi|215464946|gb|EEB95927.1| hypothetical protein MPER_05028 [Moniliophthora perniciosa FA553]
Length = 250
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PP+ L+VRN+PF + +E+ +F +G +R RI +T RGT F + + DA
Sbjct: 141 PPDAGTTLFVRNVPFTATEDELRTLFRSFGPLRYARITIDPETGRSRGTGFACFWNKEDA 200
Query: 71 KTAVDH 76
A++
Sbjct: 201 DKAIEQ 206
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E ++ F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I+++ +YD +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGQFKSRK 177
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
Length = 87
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLPF+ + +E+ D+F +YG ++ +++ S +DT RG FV ED A A++ L
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFVEMED-GGADKAIEAL 62
Query: 78 SGFNVANRYLIV 89
G R L V
Sbjct: 63 DGTTFGGRSLRV 74
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 14/103 (13%)
Query: 5 PLRKGNARLPPEVN-----------RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS- 52
PL G A LPP ++ L+V NL F+++++++ +F +G I + + +
Sbjct: 361 PLSTGLA-LPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHTD 419
Query: 53 -SKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ 94
S +GTA+V ++D+ A+ A+D ++GF++A R + V Q+
Sbjct: 420 LSGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTIQE 462
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL +I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|431794924|ref|YP_007221829.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785150|gb|AGA70433.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 83
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
LYV NLP+N +SE++ FG+YG + RI + ++T RG FV ED DA +
Sbjct: 3 TLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDD-DASRMAED 61
Query: 77 LSGFNVANRYLIV 89
L+G + R L V
Sbjct: 62 LNGKDFGGRPLTV 74
>gi|346326132|gb|EGX95728.1| small nuclear ribonucleoprotein [Cordyceps militaris CM01]
Length = 267
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+++N+P E + +FG++ R++R+ + RG AFV Y+ A
Sbjct: 190 LPP--NKILFLQNVPDEYDVEGLTALFGRFEGFREVRVVPGR--RGIAFVEYDAEQGATE 245
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ +G + +R + V Y +Q
Sbjct: 246 AKENTAGMTLGDRNIKVTYQRQ 267
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 18 NRVLYVRNLPFNISSEEMYD----IFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV+NL + E + IF ++G + I ++ +G AFVV++ A+ A
Sbjct: 17 TRNVYVQNLEERVKPEPLTSALRTIFSEFGQVVDIVAKTNLKAKGQAFVVFDTPASAQEA 76
Query: 74 VDHLSGF 80
VD ++GF
Sbjct: 77 VDEINGF 83
>gi|313238053|emb|CBY13172.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 19 RVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAV 74
LYV+NL I + ++Y +F YG + I + + RG AF+ Y+DI DA A+
Sbjct: 8 HTLYVKNLNDKIKKIELTRQLYAMFSTYGMVLDIMVSKAPKLRGQAFITYKDISDAANAL 67
Query: 75 DHLSGFNVANRYLIVLYYQQTK----MSKKFDQKKKDDELAK 112
+ GF + +++ + ++ +KK+ K + LAK
Sbjct: 68 KRMQGFPFYEKAMMISFAKRESHVITQAKKYVPPKDERTLAK 109
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P E + L++ NL FN + ++++F K+G + +RI + +T +G +V + ++ DA
Sbjct: 97 PSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDA 156
Query: 71 KTAVDHLSGFNVANR 85
K A+D L G + NR
Sbjct: 157 KKALDALQGEYIDNR 171
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF+IS ++ IF +YG + + K+T RG AF+ YED AVD+L
Sbjct: 35 IYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
G V R L V + + K+ D + +D L + E
Sbjct: 95 GGATVLGRVLRVDHVR----YKRRDDEGTEDNLVNVDE 128
>gi|396458052|ref|XP_003833639.1| similar to RNA binding domain-containing protein [Leptosphaeria
maculans JN3]
gi|312210187|emb|CBX90274.1| similar to RNA binding domain-containing protein [Leptosphaeria
maculans JN3]
Length = 182
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 14 PPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
P NR LYVRNLP + E++ Y +F YG + I + RG A VV+ D+
Sbjct: 18 PAVPNRTLYVRNLPDKLGKEDLKRNLYMLFATYGVVIDIVALKTMKMRGQAHVVFRDVDS 77
Query: 70 AKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ A+ L GF + + + Y K K D ++K+ Y + +K
Sbjct: 78 STQAMRALQGFTFFGKEMQIAY-----------AKTKSDAISKLDGTYKLPEPEK 121
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
G +PP N +L++ NLP +S + +F +Y ++IR+ +K G AFV YED
Sbjct: 165 GQDTMPP--NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKP--GIAFVEYEDDV 220
Query: 69 DAKTAVDHLSGFNVANRYLIVLYY 92
+ A+ L GF + + +V+ +
Sbjct: 221 QSSMAMQALQGFKITPQNPMVVSF 244
>gi|396499970|ref|XP_003845608.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
gi|312222189|emb|CBY02129.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LPF +S ++ IF +YG I++ K+T RG A++ YED AVD+L
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIVLY 91
G + +R + V +
Sbjct: 95 GGATIMDRVIRVDH 108
>gi|298504119|gb|ADI86271.1| putative transformer-2 protein [Stomoxys calcitrans]
Length = 237
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYED 66
N R P R L V L N + ++ +IFGK+G I I++ ++ +RG F+ Y+
Sbjct: 100 NNREKPIPCRCLGVFGLSVNTTQPQIREIFGKFGPIESIQVVMDAQTRRSRGFCFIYYKY 159
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLY 91
+ DA+ A D+ G V R + V Y
Sbjct: 160 LADAEAARDNCCGLEVDGRRIRVAY 184
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NLPF + +++ D+F G ++ +R+ D TRG AFV Y + +A+ A++ L
Sbjct: 739 ILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNSTRGFAFVEYTTVREAQAAMEALK 798
Query: 79 GFNVANRYLIVLY 91
++ R+L++ +
Sbjct: 799 HTHLLGRHLVLQW 811
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+VRNLPF S +E+ F +G+++Q+ I K T +G AF+ + D A A
Sbjct: 331 LFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKASKGLAFISFTDPAHALAAFRAK 390
Query: 78 SGFNVANRYLIVL 90
G R L +L
Sbjct: 391 DGSTFQGRLLHLL 403
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L VR LP ++ + + F + GA+ +++ D +R FV Y +A+ A+D+
Sbjct: 4 LIVRGLPSYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEEEARQALDYF- 62
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
NR I ++S +F +K D+ELAK +E
Sbjct: 63 -----NRTFI----DTARISIQFAKKIGDEELAKQRE 90
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+++ PP + L+V NL F + + + + FG++G + +R+ + D+ +G +V +E
Sbjct: 363 GDSQNPP--SDTLFVGNLSFEVDQDAVGEAFGEHGTVVNVRLPTDMDSGNPKGFGYVTFE 420
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLY 91
I +AKTA + + G +A R + Y
Sbjct: 421 SIDEAKTAYEAMKGQEIAGRPCRLDY 446
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF S +E+ +F YG +R +R+ D +RG F + DA A++ L
Sbjct: 709 ILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSSSRGFGFAEFTTKRDALNAMNALK 768
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGV 119
++ R L++ + + ++ D +K EL KMQ+K G
Sbjct: 769 NTHLLGRRLVLAFAE----TESDDPEK---ELEKMQQKVGA 802
>gi|301108523|ref|XP_002903343.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097715|gb|EEY55767.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 260
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYED 66
+ + PP N L+V ++P +++++++++ F +G + RI K+T RG FV Y++
Sbjct: 142 SGQGPPGCN--LFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDN 199
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
A+ A+ ++GF V + L V + ++ F + D+ M
Sbjct: 200 APSAEAAIKGMNGFQVGRKRLKVQHKKEKSQGPMFGEMPTDNSANDM 246
>gi|169779457|ref|XP_001824193.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus oryzae
RIB40]
gi|238500103|ref|XP_002381286.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|83772932|dbj|BAE63060.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693039|gb|EED49385.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|391870271|gb|EIT79456.1| U1 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 379
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--------GSSKDTRGTAFVVYEDIYDA 70
+ L+V L +++ ++ FG++G I +IRI GS K RG AF+VYE D
Sbjct: 102 KTLFVSRLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDM 161
Query: 71 KTAVDHLSGFNVANRYLIV 89
K A G + +R ++V
Sbjct: 162 KAAYKETDGIRIKDRRVLV 180
>gi|268579471|ref|XP_002644718.1| Hypothetical protein CBG14713 [Caenorhabditis briggsae]
Length = 113
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
NR +YV NLPF+ + +E++D+F G I+ I + +K G AFV Y+ A AV +L
Sbjct: 16 NRQVYVGNLPFDATEQELHDVFSVMGPIKNIWM--AKRPPGFAFVTYKRTVHAYDAVKYL 73
Query: 78 SGFNVAN 84
+G + +
Sbjct: 74 NGKKICD 80
>gi|353238423|emb|CCA70370.1| probable RNA-binding protein [Piriformospora indica DSM 11827]
Length = 799
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
L V+NL F +S +E++++F +G ++ +R+ + D +RG AFV + +A+ A+ L
Sbjct: 683 LIVKNLAFEVSKKELWELFSAHGQVKSVRLPNRADRRSRGFAFVDFATRNEAENAMGQLR 742
Query: 79 GFNVANRYLIVLYYQQ 94
++ R+L++ + ++
Sbjct: 743 HSHLLGRHLVLEWAER 758
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--------------RGTAF 61
E N L+VRNL F+ + +E+ F +G I Q++ S++ T +G A+
Sbjct: 269 ETNGRLFVRNLVFSCTQDELTAHFSPFGPIEQLQFTSAELTHSQVHIPVDAESNPKGFAY 328
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVL 90
V ++D A A + L + R L +L
Sbjct: 329 VRFKDASHAVAAYEALDKTSFQGRLLHIL 357
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 24/34 (70%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQI 48
P ++ V+N+P+ SS E++++F +G+++Q+
Sbjct: 458 PRSKTIILVKNIPYGTSSSELHEMFSAFGSLKQV 491
>gi|301108515|ref|XP_002903339.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262097711|gb|EEY55763.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 255
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYED 66
+ + PP N L+V ++P +++++++++ F +G + RI K+T RG FV Y++
Sbjct: 137 SGQGPPGCN--LFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDN 194
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
A+ A+ ++GF V + L V + ++ + F + D+ M
Sbjct: 195 APSAEAAIKGMNGFQVGRKRLKVQHKKEKSQGQMFGEMPMDNSANDM 241
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + D+FGK+G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ + F+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRTFEQMKQD 286
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LYV+NL I E + F +G I ++ G SK G FV + +A AV
Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSK---GFGFVCFSSPEEATKAVTE 352
Query: 77 LSGFNVANRYLIVLYYQQ 94
++G VA + L V Q+
Sbjct: 353 MNGRIVATKPLYVALAQR 370
>gi|378755112|gb|EHY65139.1| hypothetical protein NERG_01585 [Nematocida sp. 1 ERTm2]
Length = 371
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 8 KGNAR--LPP-EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAF 61
KG+ R LP E NR +++ N+ F + EE+ ++FG +G + Q + +++T G AF
Sbjct: 118 KGSERRKLPEGEENRTVFITNISFKDTEEEVKEVFGAFGEVEQCTLVVNRETNAPTGRAF 177
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK--FDQKKKD 107
V+++ K A+ N +R L+VL Y + K+ DQK+KD
Sbjct: 178 VLFKHQDSCKEALREQVTLN--DRVLVVLKYVSPDVLKQRESDQKEKD 223
>gi|398412159|ref|XP_003857408.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
gi|339477293|gb|EGP92384.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
Length = 329
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LY+ LPF +S ++ IF +YG I + K+T RG F+ YED AVD+L
Sbjct: 35 LYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKETGKSRGFCFLKYEDQRSCDLAVDNL 94
Query: 78 SGFNVANRYLIV 89
SG V + L V
Sbjct: 95 SGAGVMGKVLSV 106
>gi|148672336|gb|EDL04283.1| mCG19744, isoform CRA_b [Mus musculus]
Length = 233
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 1 MATIPLR----KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT 56
+A+ PLR + + L P + V YV NLPF++++ ++Y IF KYG + ++ I KDT
Sbjct: 5 LASSPLRLCAEEMSGGLAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDT 63
Query: 57 R---GTAFVVYED 66
R G AF+++ D
Sbjct: 64 RKSKGVAFILFLD 76
>gi|159164312|pdb|2E5H|A Chain A, Solution Structure Of Rna Binding Domain In Zinc Finger
Cchc-Type And Rna Binding Motif 1
Length = 94
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYED 66
L P + V YV NLPF++++ ++Y IF KYG + ++ I KDTR G AF+++ D
Sbjct: 12 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLD 67
>gi|302830043|ref|XP_002946588.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
gi|300268334|gb|EFJ52515.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
Length = 284
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDH 76
+YV NL F E++YD+FG+ G I++I +G K R G AF +Y DA+ AV
Sbjct: 32 TIYVGNLAFTTREEQLYDVFGRVGHIKRIVMGLDKIQRTPCGFAFAIYYTRKDAEEAVAF 91
Query: 77 LSGFNVANRYLIV 89
L+G V +R + V
Sbjct: 92 LNGTLVDDRAIRV 104
>gi|255724646|ref|XP_002547252.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135143|gb|EER34697.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 343
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHL 77
+++ L +N++ ++ F KYG I IRI ++ +RG F+VYE DA++ VD L
Sbjct: 123 TVFIARLDYNLTELDISKAFAKYGMIESIRIIRDQNGKSRGYGFIVYERNTDAQSCVDEL 182
Query: 78 --SGFNVANRYLIV 89
SG + NR ++V
Sbjct: 183 CRSGLKLGNRTILV 196
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG + QI + G AFV +ED DA A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGR 65
Query: 78 SGFNVANRYLIV 89
G++ +L V
Sbjct: 66 DGYDFDGHHLRV 77
>gi|453084886|gb|EMF12930.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 490
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E N +++V+NLP++ S+E++ ++F G + +I+ + +RG+ V + + DA+T+
Sbjct: 390 EANPIIHVKNLPWSTSNEDLVELFQTIGTVERAEIQYEPNGRSRGSGVVQFSNTSDAQTS 449
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
++ G+ R L + Y + + Q+ D A+M
Sbjct: 450 IEKFQGYQYGGRPLGLDYAKYPEGGAMEGQESTGDLQAQM 489
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
++V NLP+ + +++ D+F + G + + +G + +G+ V +E DA+ A++ +
Sbjct: 220 IFVSNLPYQVGWQDLKDLFRQAGNVIRADVHLGQDGNPKGSGVVAFETPDDAQNAINTFN 279
Query: 79 GFNVANRYLIV 89
G++ R L V
Sbjct: 280 GYDWQGRPLEV 290
>gi|406862056|gb|EKD15108.1| RNP domain protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 397
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + Q I + +RGT V ++ A TA
Sbjct: 297 ERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAEGADTA 356
Query: 74 VDHLSGFNVANRYL 87
++ SG+ R L
Sbjct: 357 IEKFSGYQYGGRPL 370
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV NLP+ + +++ D+F + GA+ + +G +G+ V +E DA+ A
Sbjct: 133 RQIYVSNLPYTVGWQDLKDLFRQAARNGAVVRADVHLGPDGRPKGSGIVAFEHPDDARNA 192
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 193 IQQFNGYDWQGRPLEV 208
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 6 LRKGNAR----LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
R+GN +PP N +L+++NLP +S + +F +Y R++R+ +K G AF
Sbjct: 144 FRQGNQSAQETVPP--NNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAKP--GIAF 199
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
V +ED + A+ L GF + + + + Y
Sbjct: 200 VEFEDDVQSSMAMQALQGFKITPQNPMAITY 230
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIY 68
+PP N+ +Y++NL + EE+ Y +F +YG I + + RG A+VV+ ++
Sbjct: 6 IPP--NQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTARLRGQAWVVFSEVT 63
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
A AV + GF ++ + + Y
Sbjct: 64 AASNAVRQMQGFPFYDKPMRIQY 86
>gi|119478950|ref|XP_001259504.1| small nuclear ribonucleoprotein U)1a,U)2b [Neosartorya fischeri
NRRL 181]
gi|119407658|gb|EAW17607.1| small nuclear ribonucleoprotein U)1a,U)2b [Neosartorya fischeri
NRRL 181]
Length = 251
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDT 56
MA +P + LPP N +YVRNL I +++ +IF +YG I I ++
Sbjct: 1 MAAVPAT--TSSLPP--NPTVYVRNLEERIKIDQLKVALEEIFSEYGNIVDIVAKTNLKA 56
Query: 57 RGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
+G AF+V++++ A A++ ++GF + ++ + VL Y +T+
Sbjct: 57 KGQAFIVFDNVESATRAIEEVNGFELFDKPM-VLDYAKTR 95
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R+LP E + IFG++ +++R+ + +G AFV YE+ A +
Sbjct: 172 LPP--NKILFLRDLPDTADQESLTAIFGRFEGFQEVRLVPGR--KGIAFVEYENESGAIS 227
Query: 73 AVDHLSGFNVA-NRYLIVLYYQQ 94
A + + + N I + YQ+
Sbjct: 228 AKEATANMPMGDNGKPIRVTYQR 250
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGKYG +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDSGKSKGFGFVSFERHEDAQKAVDDMN 252
Query: 79 GFNVANRYLIV----LYYQQTKMSKKFDQKKKD 107
G ++ + + V +QT++ +KF+Q K+D
Sbjct: 253 GKDMNGKAIYVGRAKKVERQTELKRKFEQMKQD 285
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A+D ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNG 160
Query: 80 FNVANRYLIVLYYQQTKMS----------------KKFDQKKKDDELAKMQEKYG 118
+ +R + V ++ K K F + D+ L +M KYG
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYG 215
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 9 GNARLPPEVNRV-----LYVRNLPFNISSEEMYDIFGKYGAI------RQIRIGSSKDTR 57
GN LPP V+ LYV +L FN++ ++ +F +G + R G SK
Sbjct: 358 GNLNLPPGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSK--- 414
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
G AFV Y+ DA+ A++ + GF +A R L V + K + K+ Q+ DE
Sbjct: 415 GYAFVQYKRAEDARMALEQMEGFELAGRTLRVNTVHE-KGTTKYAQQDSLDE 465
>gi|125546077|gb|EAY92216.1| hypothetical protein OsI_13935 [Oryza sativa Indica Group]
Length = 960
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI------GSSKDTRGTAFVVYEDIYDAKTAV 74
+ VRNLPF I+ +E+ DIF G I + I G+SK G AFV + DA+ A+
Sbjct: 304 VIVRNLPFKITVKEIMDIFSLAGFIWDVSIPQKSYDGASK---GFAFVSFTRKQDAENAI 360
Query: 75 DHLSGFNVANRYLIVLYYQQTKM-SKKFDQKKKDDELAKMQEK 116
+++G VA R + V + K+ + KDDELA + ++
Sbjct: 361 KNVNGKVVAKRTVAVDWAVPKKVYTVAAKSSTKDDELANVSDR 403
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQ---IRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
++V NLP+ S ++ +F + G +R+ + S+ +RG FV + + DA+ ++
Sbjct: 35 TVFVSNLPYTFKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQR 94
Query: 77 LSGFNVANRYLIV 89
GF+VA R + V
Sbjct: 95 KDGFSVAGRKIRV 107
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQ---IRIGSSKDTRGTAFVVY 64
++R L++ NLPF++S+EE+ + F +G + + +K RGT F+ +
Sbjct: 521 LDRTLFISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTGFLKF 571
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ DT +G F+ + D AK A++ L
Sbjct: 233 LYVGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKALEQL 292
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 293 NGFELAGRPMKV 304
>gi|115387505|ref|XP_001211258.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195342|gb|EAU37042.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 254
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 18 NRVLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N + VRNL I E + +IF +YG I +I ++ +G AF+V++++ A A
Sbjct: 17 NHLTQVRNLEERIKVDNLKEALSEIFSEYGNILEIVAKTNLKAKGQAFIVFDNVESATRA 76
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
+D ++GF + ++ + VL Y +T+ ++ +DEL
Sbjct: 77 IDEINGFELFDKPM-VLDYAKTRSDATVLREGGEDEL 112
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L++R+LP N + + +FG++ +++R+ + +G AFV YE+ A +
Sbjct: 175 LPP--NKILFLRDLPDNADQDSLTAVFGRFEGFQEVRLVPGR--KGIAFVEYENESGAIS 230
Query: 73 AVDHLSGF 80
A + SG
Sbjct: 231 AKEATSGM 238
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV N+ FN++ +++ IF +G + +++ DT RG FV Y D A+ A++ +
Sbjct: 228 LYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKM 287
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 288 NGFELAGRAIRV 299
>gi|358339903|dbj|GAA47875.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 471
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L++ NLP +I ++ +FG +GA+R +++ T RGT FV + +A A+ +L
Sbjct: 383 LFLCNLPPDIEEATLWRLFGPFGAVRSVKVVREPGTNRCRGTGFVNMTNYAEALLAIQNL 442
Query: 78 SGFNVANRYLIV 89
+G+ + NR+L V
Sbjct: 443 NGYPLGNRHLQV 454
>gi|361124073|gb|EHK96194.1| putative Multiple RNA-binding domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 763
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+ ++NLPF S +++ +FG YG +R +R+ D RG AF + +A+ A++ L
Sbjct: 641 IIIKNLPFEASKKDIRTLFGTYGQLRSVRMPKKFDHSARGFAFADFITAREAENALEALK 700
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYG 118
++ R L++ + + D ++E+ +MQ+K G
Sbjct: 701 DTHLLGRRLVLEFAAE-------DSIDAEEEIERMQKKVG 733
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDIYDAKTAVD 75
N L+VRNLP+ + +++ + F +G + +I + +S ++G V Y + A A
Sbjct: 234 NGRLFVRNLPYTATEDDLRNHFEPFGPLEEIHLAVDASGTSKGFLLVQYSNPESAAEAFH 293
Query: 76 HLSGFNVANRYLIVL 90
L G R L +L
Sbjct: 294 QLDGEPFQGRLLHIL 308
>gi|302916253|ref|XP_003051937.1| hypothetical protein NECHADRAFT_59730 [Nectria haematococca mpVI
77-13-4]
gi|256732876|gb|EEU46224.1| hypothetical protein NECHADRAFT_59730 [Nectria haematococca mpVI
77-13-4]
Length = 432
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV NLPFN+ +++ D+F + GA+ + IG +G+ VV+E DA+ A
Sbjct: 169 RQIYVANLPFNVGWQDLKDLFRQAARNGAVIRADVHIGPDGRPKGSGIVVFESPDDARNA 228
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 229 IQQFNGYDWQGRVLEV 244
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDIYDAKTA 73
E + +YVRNLP++ S++++ ++F G + Q I S +RGT V ++ A+TA
Sbjct: 329 ERSETIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETAETA 388
Query: 74 VDHLSGFNVANRYL 87
+ G+ R L
Sbjct: 389 IAKFQGYQYGGRPL 402
>gi|50543140|ref|XP_499736.1| YALI0A03773p [Yarrowia lipolytica]
gi|49645601|emb|CAG83659.1| YALI0A03773p [Yarrowia lipolytica CLIB122]
Length = 330
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+RVL+V NLPFN + E + D F G IR++R+ S +DT + + D YDA L
Sbjct: 164 SRVLFVGNLPFNATEEMLQDHFKSCGDIRRVRMMSFEDTGKSKGFSFVDFYDADATRKAL 223
Query: 78 SG 79
G
Sbjct: 224 KG 225
>gi|312072049|ref|XP_003138888.1| hypothetical protein LOAG_03303 [Loa loa]
gi|307765946|gb|EFO25180.1| hypothetical protein LOAG_03303 [Loa loa]
Length = 312
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV LPF+++ ++ +F +YG I I + + T RG AFV YED AVD+
Sbjct: 40 IYVGGLPFDLNEGDVIAVFSQYGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNF 99
Query: 78 SGFNVANRYLIVLYYQQTKMSK 99
+G + R + V + ++ K+ K
Sbjct: 100 NGIKLLKRIIRVDHVEEYKVPK 121
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V NL F+++++++ +F +G I + + S +GTA+V ++D+ A+ A+D ++
Sbjct: 360 LFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDLSGLRKGTAYVQFKDVKSAQMALDAMA 419
Query: 79 GFNVANRYLIVLYYQQ 94
GF++A R + V Q+
Sbjct: 420 GFDLAGRLIKVQTIQE 435
>gi|378732142|gb|EHY58601.1| hypothetical protein HMPREF1120_06609 [Exophiala dermatitidis
NIH/UT8656]
Length = 451
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTA 73
E N ++YVRNLP++ S+E++ ++F G + + I + +RGT V + DA+TA
Sbjct: 347 EKNPIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFGSADDAETA 406
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKYGVSTKDK 124
+ +G+ R L + Y + T + +E QE G T+D+
Sbjct: 407 ISKFTGYMYGGRPLGLSYVKYTNAN--------GNEAMDGQEATGGMTQDQ 449
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKY----GAIR-QIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
LYV NLPFN+ +++ D+F + G IR + + ++ +GT V +E DA+ A+
Sbjct: 172 LYVSNLPFNVGWQDLKDLFRQAATEGGVIRADVHVDATGRPKGTGIVAFESPNDARNAIQ 231
Query: 76 HLSGFNVANRYLIV 89
+G++ R L V
Sbjct: 232 QFNGYDWHGRALEV 245
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+VRNLP+ + EE+ + F K+G I ++ + K+T RG A+++Y A A++ L
Sbjct: 267 LFVRNLPYTATEEELMEHFSKFGEISEVHLVLDKETKRSRGIAYILYPIPECAARAMEEL 326
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
+ R L VL + + S K
Sbjct: 327 DNSSFQGRLLHVLPAKHRETSDK 349
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+L V+NLPF + +E+ +FGK+G++ +I + T+ A VV+ + +A+ A+ +S
Sbjct: 460 ILLVKNLPFASTEKELAQMFGKFGSLDKIILPP---TKTMALVVFLEPAEARAALKGMS 515
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVD 75
N + V+NLPF + ++++++F +G ++ +R+ K RG AFV + +A+ A+D
Sbjct: 737 NGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFVLPKEAENAMD 796
Query: 76 HLSGFNVANRYLIV 89
L G ++ R L++
Sbjct: 797 QLQGVHLLGRRLVM 810
>gi|374997451|ref|YP_004972950.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
orientis DSM 765]
gi|357215817|gb|AET70435.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
orientis DSM 765]
Length = 83
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
LYV NLP+N ++EE+ + F YG + RI + ++T RG F+ ED DA +
Sbjct: 4 TLYVGNLPWNTTAEELGEFFSAYGQVESSRIITDRETGRSRGFGFIEVEDA-DAARMAEE 62
Query: 77 LSGFNVANRYLIV 89
L+G + R L V
Sbjct: 63 LNGKDFGGRPLTV 75
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+VRNLP+ + +E+ ++F K+G + Q+ + +KDT +G A+V++ A A++ L
Sbjct: 231 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEEL 290
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
R L V+ ++ K S+K
Sbjct: 291 DNSIFQGRLLHVMPAREKKPSEK 313
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N +L V+NLP+ S E+ +FGKYG++ +I + T+ A VV+ + +A+ A L
Sbjct: 424 NHILLVKNLPYGSSEGELAKMFGKYGSLDKIILPP---TKTLALVVFLEPAEARAAFRGL 480
Query: 78 S 78
+
Sbjct: 481 A 481
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
L VRN+ F + +++ +F +G I+ +R+ GS RG AFV + +A+ A+
Sbjct: 648 LIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSH---RGFAFVEFVTKQEAQNALQA 704
Query: 77 LSGFNVANRYLIV 89
LS ++ R+L++
Sbjct: 705 LSSTHLYGRHLVM 717
>gi|350397588|ref|XP_003484924.1| PREDICTED: RNA-binding protein 28-like [Bombus impatiens]
Length = 768
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTAVDHLS 78
+ +RNL F + E++ F YGA+ +IRI D + G AF+ +E + A A+ + +
Sbjct: 198 IVIRNLSFQATEEDLKKHFSPYGAVEEIRILKRSDGKNIGCAFLQFEHVQSAAKAIHYTN 257
Query: 79 GFNVANRYLIVLY-YQQTKMSKKFDQKKKDDEL 110
++ NR +IV + + K ++ + K++DE+
Sbjct: 258 LQSLLNRPIIVDWAVSKNKFAQNNSENKQEDEV 290
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTAVDHLS 78
+ VRN+PF + E++ ++ +G I +I D G F+ ++ + DA A+ +
Sbjct: 45 IIVRNIPFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCCFIQFKQLKDASKAIFSTN 104
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAK-MQEKYGVS 120
R I+ SK ++ KKD E AK + ++G S
Sbjct: 105 KKEFLGR--IINSSWAVSRSKYCEKLKKDSEKAKNLDNEHGTS 145
>gi|302816013|ref|XP_002989686.1| hypothetical protein SELMODRAFT_184747 [Selaginella
moellendorffii]
gi|300142463|gb|EFJ09163.1| hypothetical protein SELMODRAFT_184747 [Selaginella
moellendorffii]
Length = 228
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 18 NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N +Y++NL + +EM + +F YG I + + + RG A+VV+ +I A +A
Sbjct: 7 NETIYIKNLNSKVKKQEMKRALHALFSAYGRILDVVVCKTPKLRGQAWVVFNEIPAATSA 66
Query: 74 VDHLSGFNVANRYLIVLY 91
+ H+ F + +R +++ Y
Sbjct: 67 LRHMKEFQLFDRPMVIQY 84
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
A P++ G E N +L+++NLP S + +F +Y ++ +R+ + G AF
Sbjct: 140 APPPVKPGTQ----EPNSILFIQNLPDETSGPMLEMLFTRYPGLKDVRMVDGRP--GIAF 193
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
V Y D A A++ L F + + +V+ Y
Sbjct: 194 VEYSDEGQATVALEALQSFKITANHAMVISY 224
>gi|302820252|ref|XP_002991794.1| hypothetical protein SELMODRAFT_236385 [Selaginella
moellendorffii]
gi|300140475|gb|EFJ07198.1| hypothetical protein SELMODRAFT_236385 [Selaginella
moellendorffii]
Length = 228
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 18 NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N +Y++NL + +EM + +F YG I + + + RG A+VV+ +I A +A
Sbjct: 7 NETIYIKNLNSKVKKQEMKRALHALFSAYGRILDVVVCKTPKLRGQAWVVFNEIPAATSA 66
Query: 74 VDHLSGFNVANRYLIVLY 91
+ H+ F + +R +++ Y
Sbjct: 67 LRHMKEFQLFDRPMVIQY 84
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
A P++ GN E N +L+++NLP + + +F +Y ++ +R+ + G AF
Sbjct: 140 APPPVKPGNQ----EPNSILFIQNLPDETTGPMLEMLFTRYPGLKDVRMVDGRP--GIAF 193
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYY 92
V Y D A A++ L F + + +V+ Y
Sbjct: 194 VEYSDEGQATVALEALQSFKITANHAMVISY 224
>gi|17136546|ref|NP_476764.1| transformer 2, isoform A [Drosophila melanogaster]
gi|45552621|ref|NP_995834.1| transformer 2, isoform G [Drosophila melanogaster]
gi|45552623|ref|NP_995835.1| transformer 2, isoform F [Drosophila melanogaster]
gi|136128|sp|P19018.1|TRA2_DROME RecName: Full=Transformer-2 sex-determining protein
gi|8717|emb|CAA40722.1| tra-2 [Drosophila melanogaster]
gi|158647|gb|AAA28953.1| transformer-2 protein [Drosophila melanogaster]
gi|158649|gb|AAA28954.1| transformer-2 protein A [Drosophila melanogaster]
gi|16186095|gb|AAL13997.1| SD04329p [Drosophila melanogaster]
gi|21627194|gb|AAF58232.2| transformer 2, isoform A [Drosophila melanogaster]
gi|45445686|gb|AAS64910.1| transformer 2, isoform F [Drosophila melanogaster]
gi|45445687|gb|AAS64911.1| transformer 2, isoform G [Drosophila melanogaster]
gi|220946556|gb|ACL85821.1| tra2-PA [synthetic construct]
gi|220956234|gb|ACL90660.1| tra2-PA [synthetic construct]
Length = 264
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+ +E +
Sbjct: 89 SREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL 148
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DA+ A D SG V R + V
Sbjct: 149 SDARAAKDSCSGIEVDGRRIRV 170
>gi|340518594|gb|EGR48835.1| predicted protein [Trichoderma reesei QM6a]
Length = 748
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAV 74
++VRNLPF + E++ FG +G +R R+ K T GT FV + D DAK +
Sbjct: 338 TVFVRNLPFTTTDEQLQSFFGHFGKVRYARVVIDKATEKPAGTGFVCFVDAADAKACI 395
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FN++ +++ +F +G I + + + T +G AFV +++++DAK A++ +
Sbjct: 435 LYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 494
Query: 78 SGFNVANRYLIV 89
+GF +A R L V
Sbjct: 495 NGFQLAGRALRV 506
>gi|322693277|gb|EFY85143.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 309
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PP +RV++V N+P+ +S E++ +IF + G + + R+ +T +G F Y D A
Sbjct: 5 PP--SRVVFVGNIPYGLSEEQITEIFSRAGKVERFRLVYDSETGRPKGFGFADYPDTDSA 62
Query: 71 KTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
+AV +L+ F V R L V + +QK DD+
Sbjct: 63 SSAVRNLNDFEVMGRKLRVDFSN--------EQKSGDDD 93
>gi|695327|gb|AAA62771.1| transformer-2, partial [Drosophila melanogaster]
Length = 256
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+ +E +
Sbjct: 81 SREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL 140
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DA+ A D SG V R + V
Sbjct: 141 SDARAAKDSCSGIEVDGRRIRV 162
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F +++++Y +F +YG + + I + D+RG AFV Y+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQE 115
+A+ AVD L G NV R ++V + + ++ + + +E+ K+ +
Sbjct: 69 EAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRVIEEVEKLHD 115
>gi|335288660|ref|XP_003355667.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sus scrofa]
Length = 93
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYED 66
L P + V YV NLPF++++ ++Y IF KYG + ++ I KDTR G AF+++ D
Sbjct: 5 LAPSKSTV-YVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLD 60
>gi|195053126|ref|XP_001993480.1| GH13830 [Drosophila grimshawi]
gi|193900539|gb|EDV99405.1| GH13830 [Drosophila grimshawi]
Length = 180
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGA---IRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
++V P+ +S ++ +F +YG I +R G + ++G F+ YED AVD+L
Sbjct: 36 IFVAGFPYTLSEGDLVCVFSQYGEVVNINLVRDGKTGKSKGFCFLCYEDQRSTVLAVDNL 95
Query: 78 SGFNVANRYL---IVLYYQQTKMSKKFDQK 104
+G + R L VL Y+ K ++K D++
Sbjct: 96 NGIKIMERTLRVDHVLDYKPPKDNEKLDEE 125
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
L+V NL F+ + ++++ IFG+YG++ IR+ + +T +G +V + + +AK A++
Sbjct: 271 TLFVGNLSFDTNRDDLFGIFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVDEAKAALEG 330
Query: 77 LSGFNVANRYLIVLY 91
LSG+ R + Y
Sbjct: 331 LSGYEYLGRSFRLDY 345
>gi|448528114|ref|XP_003869664.1| hypothetical protein CORT_0D06980 [Candida orthopsilosis Co 90-125]
gi|380354017|emb|CCG23531.1| hypothetical protein CORT_0D06980 [Candida orthopsilosis]
Length = 109
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
++ +N+ F S ++++ F +G I QIR + +G FV+Y D+ A+ A L+G
Sbjct: 31 IVSAKNVSFAASPTQIFETFAPFGHIYQIR--HNPQEKGQYFVIYHDLQSAQLAAKELNG 88
Query: 80 FNVANRYLIVLYY 92
N+ RYL+ Y
Sbjct: 89 VNLEGRYLVTSIY 101
>gi|154300366|ref|XP_001550599.1| hypothetical protein BC1G_11372 [Botryotinia fuckeliana B05.10]
Length = 493
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + Q I + +RGT V ++ +A TA
Sbjct: 390 ERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAENADTA 449
Query: 74 VDHLSGFNVANRYL 87
++ SG+ R L
Sbjct: 450 IEKFSGYQYGGRPL 463
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAIRQ--IRIGSSKDTRGTAFVVYEDIYDAKTA 73
R +YV NLP+ + +++ D+F + GA+ + + +G +G+ V +E DA+ A
Sbjct: 229 RQIYVSNLPYTVGWQDLKDLFRGAARNGAVVRADVHVGPDGRPKGSGIVAFESPDDARNA 288
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 289 IQQFNGYDWQGRPLEV 304
>gi|406929348|gb|EKD64949.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 106
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIYDAKTAVDHL 77
L+V LPF I+ E + +FG G ++ + I + ++RG FV + DAK A++ L
Sbjct: 5 LFVGGLPFTIAGEALEQLFGSVGQVQSVNIIKDRYTGNSRGFGFVEMVNDEDAKKAIEKL 64
Query: 78 SGFNVANRYLIV 89
+G+N+ R ++V
Sbjct: 65 NGYNLEGRNIVV 76
>gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|60618430|gb|AAH90598.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|89273875|emb|CAJ82017.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
Length = 282
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 18 NRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
N +Y+ NL I +E+ Y IF ++G I I + S RG AFV++++I A A
Sbjct: 9 NNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEISSATNA 68
Query: 74 VDHLSGFNVANRYLIVLYYQQ-----TKMSKKF---DQKKKDDELAKMQEKYGV 119
+ + GF ++ + + Y + KM + D+K+++ K QE GV
Sbjct: 69 LRSMQGFPFYDKPMRIQYSKSDSDIIAKMKGTYVERDRKRQEKRKVKGQEAPGV 122
>gi|351712487|gb|EHB15406.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 327
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYE 65
GN R P+ N L V L S ++ ++F KYG I + IG S+ +RG AFV +E
Sbjct: 163 GN-RANPDPNLCLGVFGLSLYTSERDLREVFSKYGPIADVSIGCNQQSRRSRGFAFVCFE 221
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLY 91
++ DAK A + +G R + V +
Sbjct: 222 NVDDAKEAKECANGMEPDGRRIRVGF 247
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGR 65
Query: 78 SGFNVANRYLIV 89
G+N L V
Sbjct: 66 DGYNFDGHRLRV 77
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ + + IF +G I I++ DT +G F+ + + DAK A++ L
Sbjct: 271 LYVGSLHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQL 330
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 331 NGFELAGRPMKV 342
>gi|440801091|gb|ELR22116.1| hypothetical protein ACA1_159130 [Acanthamoeba castellanii str.
Neff]
Length = 270
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTRGTAFVVYED 66
A +PP N LYV NL + +E+ Y +F +YG + I S RG AFV++ D
Sbjct: 3 AEVPP--NETLYVNNLNEKVKRDELRKALYGLFSQYGTVLDIVAQKSLKLRGQAFVIFRD 60
Query: 67 IYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEKY 117
I A TA+ L F ++ + + Y K K D +AK++ +
Sbjct: 61 IGSASTALKALQSFAFYDKPMHIQY-----------AKSKSDLVAKIRGTF 100
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
++V NL F S E++ +F +YG ++QI++ ++T RG AFV E+ D + A+D
Sbjct: 2 TIFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 77 LSGFNVANRYLIV 89
L G R L V
Sbjct: 62 LDGATWMGRDLRV 74
>gi|119478256|ref|XP_001259339.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
gi|119407493|gb|EAW17442.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
Length = 382
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--------GSSKDTRGTAFVVYEDIYDA 70
+ L+V L +++ ++ FG++G I +IRI GS K RG AF+VYE D
Sbjct: 102 KTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDM 161
Query: 71 KTAVDHLSGFNVANRYLIV 89
K A G + +R ++V
Sbjct: 162 KAAYKETDGIRIKDRRVLV 180
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+ R PP + L++ N+ F S+E + ++F +YG+I ++ + + +DT +G +V +
Sbjct: 311 GDKRSPP--SNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFS 368
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLY 91
+A A++ L+G ++ R + + Y
Sbjct: 369 SQQEATAALEALNGQDIGGRAIRIDY 394
>gi|258568094|ref|XP_002584791.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906237|gb|EEP80638.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 420
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ +E++ ++F G + + I ++ +RGT V ++ I +A+TA
Sbjct: 315 ERSALIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEQNGRSRGTGVVQFDTIENAETA 374
Query: 74 VDHLSGFNVANRYLIVLY 91
+ SG+ R L + +
Sbjct: 375 ISKFSGYQYGGRPLGLTF 392
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKT 72
+R +YV NLPFN+ +++ D+F + G + + + + +G+ V +E + DA+
Sbjct: 159 SRQIYVSNLPFNVGWQDLKDLFRQATQQGTVVRADVHLDPNGRPKGSGIVAFESVEDARN 218
Query: 73 AVDHLSGFNVANRYLIV 89
A+ +G+ R L V
Sbjct: 219 AIQQFNGYEWHGRNLEV 235
>gi|50289145|ref|XP_447002.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526311|emb|CAG59935.1| unnamed protein product [Candida glabrata]
Length = 383
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N L+VR P ++ E+ +IFG +GA+++++I G AFV +E+ A A++ +
Sbjct: 104 NTRLFVRPFPLDVQESELNEIFGPFGAMKEVKI-----LNGFAFVEFEEAESASKAIEEV 158
Query: 78 SGFNVANRYLIVLY 91
+G AN+ L V++
Sbjct: 159 NGKTFANQPLEVMF 172
>gi|195334390|ref|XP_002033866.1| GM20203 [Drosophila sechellia]
gi|194125836|gb|EDW47879.1| GM20203 [Drosophila sechellia]
Length = 265
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+ +E +
Sbjct: 89 SREQPKASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL 148
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DA+ A D+ SG V R + V
Sbjct: 149 SDARAAKDNCSGIEVDGRRIRV 170
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E + ++FGK+G +++ + + ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + + + V Q QT++ +KF+Q K+D
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQD 286
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|357626334|gb|EHJ76460.1| hypothetical protein KGM_20562 [Danaus plexippus]
Length = 966
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAV 74
PE + LYV NLP ++ ++++ +F ++G I RI S G AFV+YE Y+A+ A+
Sbjct: 105 PEADWNLYVCNLPNELTLQDLHGLFAQFGKIVNSRIAS-----GIAFVLYEHQYEAERAI 159
Query: 75 DHLSG 79
+++G
Sbjct: 160 HNVNG 164
>gi|343429703|emb|CBQ73275.1| related to Cleavage stimulation factor [Sporisorium reilianum
SRZ2]
Length = 391
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
P +RV++V N+P+++S E++ D+F + G + R+ + +DT +G F +ED A
Sbjct: 4 PQRGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETA 63
Query: 71 KTAVDHLSGFNVANRYLIVLY 91
+AV +L+ V R L + +
Sbjct: 64 ASAVRNLNEVEVGGRPLRISF 84
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 65
Query: 78 SGFNV-ANRYLIVLYYQQTKMSKKFDQ 103
G+N NR + L + S F+
Sbjct: 66 DGYNFDGNRLRVELAHGGRGNSSSFNN 92
>gi|115389920|ref|XP_001212465.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194861|gb|EAU36561.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 468
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ +E++ D+F G + +I+ + +RGT V +++ A+TA
Sbjct: 355 EKSPIIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNAETAETA 414
Query: 74 VDHLSGFNVANRYLIVLYYQQTKM 97
+ +G+ R L + + + M
Sbjct: 415 IAKFTGYQYGGRPLGITFVKYMNM 438
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 19 RVLYVRNLPFNISSEEMYDIF---GKYGAI--RQIRIGSSKDTRGTAFVVYEDIYDAKTA 73
R LYV NLPFN+ +++ D+F + GA+ + ++ +G+ V +E DA+ A
Sbjct: 200 RQLYVANLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPDDARNA 259
Query: 74 VDHLSGFNVANRYLIV 89
+ +G++ R L V
Sbjct: 260 IQQFNGYDWQGRTLEV 275
>gi|406606952|emb|CCH41674.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 267
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSG 79
L++R LPF+I EE+ D FG G +++I I + G AFV Y DAK AV+ L+G
Sbjct: 11 LFIRPLPFDIKEEEIKDFFGPIGEVKEIVINN-----GFAFVEYNIADDAKRAVEELNG 64
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV NLP++I++ E+ ++FG+ G + + I + T RG AFV + DAK A+
Sbjct: 110 LYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEAIRMF 169
Query: 78 SGFNVANRYLIVLYYQQTKMSKKF 101
G V R + V + + K ++
Sbjct: 170 DGSQVGGRTVKVNFPEVPKGGERL 193
>gi|356538883|ref|XP_003537930.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 970
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 5 PLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVY 64
P+R + PP N L+V NL +++ ++ ++F KYGA+ + +S R AFV +
Sbjct: 7 PMRDFDESAPPSNN--LWVGNLAADVTDADLMELFAKYGALDSV---TSYSARSYAFVFF 61
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKF 101
+ + DAK A + L G ++ L + + + K K+
Sbjct: 62 KRVEDAKAAKNALQGTSLRGSSLKIEFARPAKACKQL 98
>gi|121713748|ref|XP_001274485.1| small nuclear ribonucleoprotein U)1a,U)2b [Aspergillus clavatus NRRL
1]
gi|119402638|gb|EAW13059.1| small nuclear ribonucleoprotein U)1a,U)2b [Aspergillus clavatus NRRL
1]
Length = 1390
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 23 VRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
VRNL I E + +IF +YG I +I ++ +G AF+V++D+ A A+D ++
Sbjct: 1158 VRNLEERIKVDQLKEALAEIFSEYGNILEIVAKTNLKAKGQAFIVFDDVESATRAIDEVN 1217
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
GF++ ++ + VL Y +TK ++ +EL
Sbjct: 1218 GFDLFDKPM-VLDYAKTKSDATVLREGGSEEL 1248
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
A IP + LPP N++L++R+LP + + + +FG++ R++R+ + +G AF
Sbjct: 1304 AVIP----DEYLPP--NKILFLRDLPDSADQDSLTAVFGRFEGFREVRLVPGR--KGIAF 1355
Query: 62 VVYEDIYDAKTAVDHLSGFNVAN 84
V YE+ A +A + SG + +
Sbjct: 1356 VEYENESGAISAKEATSGMPMGD 1378
>gi|358368597|dbj|GAA85213.1| RNA binding domain protein [Aspergillus kawachii IFO 4308]
Length = 289
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+Y+ LP+++S ++ IF +YG I + K+T RG F+ YED AVD+L
Sbjct: 35 IYIGGLPYDLSEGDIITIFSQYGEPVHINLVRDKETGKSRGFCFLKYEDQRSTDLAVDNL 94
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKM 113
G V R L V + + K+ D +++ D +AK+
Sbjct: 95 GGATVLGRVLRVDHVRY----KRRDDEEETDNVAKL 126
>gi|328868243|gb|EGG16621.1| hypothetical protein DFA_07599 [Dictyostelium fasciculatum]
Length = 903
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
R L+VRN+ EE+ IF +YG IR+ S+ +RG F+ Y DI DA+TA
Sbjct: 227 RTLFVRNILIGSDEEEVVSIFEQYGEIRR---KFSQISRGICFIAYYDIRDAETAKIKAE 283
Query: 79 GFNVANRYLIVLY 91
G + NR + + +
Sbjct: 284 GLKIRNRPIHISF 296
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ + + IF +G I +I + +T +G F+ + D DAK A++ L
Sbjct: 147 LYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 206
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 207 NGFELAGRPMKV 218
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGR 65
Query: 78 SGFNVANRYLIV 89
G+N L V
Sbjct: 66 DGYNFDGHRLRV 77
>gi|195583420|ref|XP_002081520.1| GD25673 [Drosophila simulans]
gi|194193529|gb|EDX07105.1| GD25673 [Drosophila simulans]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+ +E +
Sbjct: 4 SREQPKASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL 63
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DA+ A D SG V R + V
Sbjct: 64 SDARAAKDSCSGIEVDGRRIRV 85
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 19 RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVD 75
RV+++ N+P+ +S E++ DIFG+ G + R+ K+T +G F+ Y D A +AV
Sbjct: 9 RVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVR 68
Query: 76 HLSGFNVANRYLIVLY 91
+L+ ++ R L V Y
Sbjct: 69 NLNESDLNGRTLRVDY 84
>gi|322709895|gb|EFZ01470.1| small nuclear ribonucleoprotein [Metarhizium anisopliae ARSEF 23]
Length = 242
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKT 72
LPP N++L+++N+P + + IFG++ R+IR+ + RG AFV YE A
Sbjct: 165 LPP--NKILFLQNIPEEYDVDALGAIFGRFEGFREIRLVPGR--RGIAFVEYEAEQGAID 220
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
A ++ SG + + + V Y +Q
Sbjct: 221 AKENTSGMKLGDTAIKVTYQRQ 242
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 20 VLYVRNLPFNIS----SEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVD 75
+YV NL + +E + IF ++G + I + +G AF+V+ D A+ A++
Sbjct: 9 TVYVHNLEERVKIQPLTESLKTIFSEFGDVVDIVAKKNLKAKGQAFIVFSDPDSARDAIE 68
Query: 76 HLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDEL 110
L GF + ++ + L +T+ K + DE
Sbjct: 69 ELQGFQLFDKPM-KLSLAKTRSDKSIEMNCSLDEF 102
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 13 LPPEVN--------RVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAF 61
+PPE + +Y+ LPF++S ++ IF +YG + + K+T +G AF
Sbjct: 19 IPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPVHVNLVRDKETGKSKGFAF 78
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDD 108
+ YED AVD+L G V R L V + +K D++++D+
Sbjct: 79 LKYEDQRSTDLAVDNLGGATVMGRLLRV---DHARYKRKDDEEEQDN 122
>gi|320588360|gb|EFX00829.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 363
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIG--SSKDTRGTAFVVYEDIYDAKTA 73
E + +++VRNLP++ S+E++ ++FG G + Q I S +RG+ V +++ A TA
Sbjct: 259 EPSEIIFVRNLPWSTSNEDLVELFGTIGKVEQAEIQYEPSGRSRGSGVVRFDNPETADTA 318
Query: 74 VDHLSGFNVANRYLIVLY 91
+ G+ R L + +
Sbjct: 319 ISKFQGYQYGGRPLGLSF 336
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKY----GAIR-QIRIGSSKDTRGTAFVVYEDIYDAKT 72
+R +YV NLPF I +++ D+F + G R I IG +RG+ VV+E DA+
Sbjct: 169 SRQIYVANLPFTIGWQDLKDLFRQAARTAGVARADINIGPDGRSRGSGIVVFESPDDARN 228
Query: 73 AVDHLSGFNVANRYLIV 89
A+ +G++ R L V
Sbjct: 229 AIQQFNGYDWQGRVLEV 245
>gi|238879122|gb|EEQ42760.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 258
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
LY+ N+P+N++++++ IF +YG I + SSK RG F+ Y + A+D+
Sbjct: 35 LYIGNIPYNLTTKDLIIIFSQYGIPTHINLIKDKESSKHHRGFGFLKYANFKSCILAIDN 94
Query: 77 LSGFNVANRYLIV 89
+G + +RYL V
Sbjct: 95 FNGIKLGDRYLKV 107
>gi|195123295|ref|XP_002006143.1| GI18722 [Drosophila mojavensis]
gi|193911211|gb|EDW10078.1| GI18722 [Drosophila mojavensis]
Length = 248
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
AR P+ +R + V L N + +++ ++F K+G I++I++ + +RG F+ +E++
Sbjct: 75 ARDHPQASRCIGVFGLNTNTTEQKVRELFNKFGPIQRIQMVIDAQTHRSRGFCFIYFENL 134
Query: 68 YDAKTAVDHLSGFNVANRYLIVLY 91
DA+ A D +G +V R + V Y
Sbjct: 135 SDARVAKDACTGMDVDGRRIRVDY 158
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ E + IF +G I I++ + +T +G F+ + DAK A++ L
Sbjct: 3 LYVGSLHFNITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQL 62
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 63 NGFELAGRPMKV 74
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVY 64
R+ + PP R LY+ NL + ++++++ +F ++G I ++I + +RG +V +
Sbjct: 182 RRDTSDAPP--GRTLYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDNRGLSRGFGYVEF 239
Query: 65 EDIYDAKTAVDHLSGFNVANRYLIVLYYQQ 94
++I DA+TA+D+L R L+V ++++
Sbjct: 240 KNIPDAQTAIDNLDMQVFEGRNLVVQFHRE 269
>gi|17136548|ref|NP_476765.1| transformer 2, isoform C [Drosophila melanogaster]
gi|19550175|ref|NP_599107.1| transformer 2, isoform D [Drosophila melanogaster]
gi|158650|gb|AAA28955.1| transformer-2 protein B [Drosophila melanogaster]
gi|21627195|gb|AAM68557.1| transformer 2, isoform C [Drosophila melanogaster]
gi|21627196|gb|AAM68558.1| transformer 2, isoform D [Drosophila melanogaster]
Length = 226
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+ +E +
Sbjct: 51 SREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL 110
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DA+ A D SG V R + V
Sbjct: 111 SDARAAKDSCSGIEVDGRRIRV 132
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDA 70
PPE + L+V NLP+++ SE + IF G + + +++T RG FV + +A
Sbjct: 124 PPEEAK-LFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 182
Query: 71 KTAVDHLSGFNVANRYLIV 89
+ AV+ L+GF++ R L V
Sbjct: 183 EKAVEMLNGFDMNGRLLTV 201
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
+YV NLP+++ + + +F ++G + R+ S ++T RG FV + A+ L
Sbjct: 224 VYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAAL 283
Query: 78 SGFNVANRYLIV 89
G + R + V
Sbjct: 284 DGQTLDGRAIRV 295
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ + + IF +G I +I + +T +G F+ + D DAK A++ L
Sbjct: 301 LYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQL 360
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 361 NGFELAGRPMKV 372
>gi|17136550|ref|NP_476766.1| transformer 2, isoform E [Drosophila melanogaster]
gi|158651|gb|AAA28956.1| transformer-2 protein C [Drosophila melanogaster]
gi|21627197|gb|AAM68559.1| transformer 2, isoform E [Drosophila melanogaster]
Length = 179
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 11 ARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDI 67
+R P+ +R + V L N S ++ ++F KYG I +I++ ++ +RG F+ +E +
Sbjct: 4 SREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL 63
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DA+ A D SG V R + V
Sbjct: 64 SDARAAKDSCSGIEVDGRRIRV 85
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKT 72
PE + L VRN+PF + +++ ++FG YG ++ +R+ + RG AF+ + +AK
Sbjct: 730 PETTK-LVVRNVPFEATDKDLRELFGSYGQLKSLRMPKKFTGGHRGFAFLDFLTKQEAKN 788
Query: 73 AVDHLSGFNVANRYLIVLYYQQ 94
D++ ++ R+L++ + Q+
Sbjct: 789 VYDNMGNIHLYGRHLVLEWAQE 810
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVY 64
L++RNL + + +++ ++F KYG + ++ + +KDT +G A++ Y
Sbjct: 360 LFIRNLTYACTEDDLKEVFEKYGTLSEVHMPIAKDTKKSKGYAYISY 406
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
++ V+N+P+ + E+M ++FGKYG + ++ + +K A V + + +A+ A L+
Sbjct: 520 IILVKNIPYGTTEEDMRELFGKYGELGRVLMPPAKT---IAVVEFLEPSEARNAFKSLA 575
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|193678935|ref|XP_001949378.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Acyrthosiphon pisum]
Length = 226
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDH 76
+YV NLPFN+++ +++ +F KYG + ++ I K TR G AFV++ + +A V
Sbjct: 10 TVYVSNLPFNLTNNDLHKVFEKYGKLVKVTIVKDKTTRQSKGVAFVLFLNQNEANICVKS 69
Query: 77 LSGFNVANRYL 87
+G + R L
Sbjct: 70 TNGIQMFGRTL 80
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAKTAVDHL 77
L VRN+P + EE+ F ++G +R + I + + RG AFV + D Y+A A H+
Sbjct: 55 LLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHM 114
Query: 78 SGFNVANRYL-IVLYYQQTKMSKKFDQKKK 106
+G A R + +VL + K ++ Q+ +
Sbjct: 115 NGKKFAGREITVVLAAESRKRPEQMRQRSR 144
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGR 65
Query: 78 SGFNVANRYLIV 89
G+N L V
Sbjct: 66 DGYNFDGHRLRV 77
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 15 PEVNRV----LYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIY 68
P N V LYV N+ FN++ E++ +F +G + Q++ S +RG FV + D
Sbjct: 261 PHPNHVPFHRLYVGNIHFNVTEEDLRAVFEPFGELEFVQLQKDESDRSRGYGFVQFRDAT 320
Query: 69 DAKTAVDHLSGFNVANRYLIV 89
A+ A++ ++GF++A R + V
Sbjct: 321 QAREALEKMNGFDLAGRPIRV 341
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
+R +YV NLP +I E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 78 SGFNVANRYLIV 89
G++ L V
Sbjct: 66 DGYDFDGHRLRV 77
>gi|86196251|gb|EAQ70889.1| hypothetical protein MGCH7_ch7g296 [Magnaporthe oryzae 70-15]
Length = 375
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 8 KGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR--IGSSKDTRGTAFVVYE 65
+G ARL R++ + L N++ + + DIFG+YG IR + I RGTA+++Y
Sbjct: 132 QGEARLICSGFRLIVIERLTKNVTEDHLRDIFGQYGEIRDLDLPINRQGTNRGTAYILYV 191
Query: 66 DIYDAKTAVDHL 77
DA++A+ H+
Sbjct: 192 QEPDAESAIAHM 203
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++N ++ E++ ++FG YG +R+ + + ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDTGKSKGFGFVSFERHEDAQKAVDDMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G + R + V Q Q ++ +KF+Q K+D
Sbjct: 253 GKELNGRQVYVGRAQKKGERQNELKRKFEQMKQD 286
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++++NL +I ++ +YD F +G I ++ ++ ++G FV +E A+ A++ ++G
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNG 160
Query: 80 FNVANRYLIVLYYQQTK 96
+ +R + V ++ K
Sbjct: 161 MLLNDRKVFVGRFKSRK 177
>gi|15240750|ref|NP_196346.1| MEI2-like protein 4 [Arabidopsis thaliana]
gi|75335654|sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName:
Full=MEI2-like protein 4
gi|7546707|emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana]
gi|110742203|dbj|BAE99028.1| Mei2-like protein [Arabidopsis thaliana]
gi|332003750|gb|AED91133.1| MEI2-like protein 4 [Arabidopsis thaliana]
Length = 907
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
L+V NL +IS+EE++ IF YG IR++R ++++ ++ + D+ AK A+ L+G
Sbjct: 297 LWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQ--VYIEFFDVRKAKVALQGLNGL 354
Query: 81 NVANRYL 87
VA R L
Sbjct: 355 EVAGRQL 361
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
++R+L+VRN+ +I E+ +F ++G +R + ++ RG V Y DI A+ A
Sbjct: 209 LSRILFVRNVDSSIEDCELGVLFKQFGDVRALH--TAGKNRGFIMVSYYDIRAAQKAARA 266
Query: 77 LSGFNVANRYLIVLY 91
L G + R L + Y
Sbjct: 267 LHGRLLRGRKLDIRY 281
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F S+++++ +F +YG + I I + D+RG AFV Y+
Sbjct: 1 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHAD 60
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
+A+ A++ L G NV R ++V +
Sbjct: 61 EAQKAIERLDGKNVDGRNIVVQF 83
>gi|270014286|gb|EFA10734.1| transformer2, partial [Tribolium castaneum]
Length = 670
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 7 RKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVV 63
R R P+ +R L V L + +E+Y IF KYG + ++++ + +RG +FV
Sbjct: 144 RHLGTRDNPKPSRCLGVFGLSVYTTEDELYHIFSKYGPLERVQVVIDAKTGRSRGFSFVY 203
Query: 64 YEDIYDAKTAVDHLSGFNVANRYLIVLY 91
+E+ DAK A D SG + + + V Y
Sbjct: 204 FENTDDAKVAKDQCSGMKINGKNIRVDY 231
>gi|384500300|gb|EIE90791.1| hypothetical protein RO3G_15502 [Rhizopus delemar RA 99-880]
Length = 567
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV+NL I + E++ +F K+G I R+ S+ T +G FV Y +A A++ +
Sbjct: 190 LYVKNLDPTIGNTELFSLFRKFGHIVSARVMSNPATGLSKGYGFVSYSKPEEAALALNEM 249
Query: 78 SGFNVANRYLIVLYYQQTK 96
+G V ++ +IV Y++ K
Sbjct: 250 NGILVRSKAMIVAYHEPKK 268
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
L++ NL FN + +++++ FG+YG + RI + DT +G +V Y I +AK A++
Sbjct: 105 TLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKAALEA 164
Query: 77 LSGFNVANRYLIVLY 91
L+G + R + Y
Sbjct: 165 LNGEYIEGRPCRLDY 179
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans
T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans
T30-4]
Length = 233
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 2 ATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEM----YDIFGKYGAIRQIRIGSSKDTR 57
AT P A +PP N LY+ NL I ++ M Y +YG I +I +G ++ R
Sbjct: 5 ATSPPTLETADVPP--NHTLYLNNLNDKIKADRMKATLYATLSQYGKILEIVMGRARRLR 62
Query: 58 GTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQ 94
G A+V ++D+ A +A+ ++G + ++ +++ + ++
Sbjct: 63 GQAWVTFDDVPSASSALRTVNGTTLFDKPVVIHFAKE 99
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 12 RLPPE--VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYD 69
R+P + N++L++ LP + + E + +F +Y +++R+ K +G AFV + D
Sbjct: 150 RMPAQNLPNKILFLEELPESCNKEMLGVLFKQYQGFKEVRMVPGK--KGLAFVEFGDEAQ 207
Query: 70 AKTAVDHLSGFNV 82
A A+ L GF +
Sbjct: 208 AAIALQGLFGFKL 220
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
++V NL F S E++ +F +YG ++QI++ ++T RG AFV E+ D + A+D
Sbjct: 2 TIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 77 LSGFNVANRYLIV 89
L G R L V
Sbjct: 62 LDGATWMGRDLRV 74
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
L+VRNLP+ + +E+ ++F K+G + Q+ + +KDT +G A+V++ A A++ L
Sbjct: 447 LFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEEL 506
Query: 78 SGFNVANRYLIVLYYQQTKMSKK 100
R L V+ ++ K S+K
Sbjct: 507 DNSIFQGRLLHVMPAREKKPSEK 529
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 18 NRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
N +L V+NLP+ S E+ +FGKYG++ +I + T+ A VV+ + +A+ A L
Sbjct: 640 NHILLVKNLPYGSSEGELAKMFGKYGSLDKIILPP---TKTLALVVFLEPAEARAAFRGL 696
Query: 78 S 78
+
Sbjct: 697 A 697
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI----GSSKDTRGTAFVVYEDIYDAKTAVDH 76
L VRN+ F + +++ +F +G I+ +R+ GS RG AFV + +A+ A+
Sbjct: 864 LIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSH---RGFAFVEFVTKQEAQNALQA 920
Query: 77 LSGFNVANRYLIV 89
LS ++ R+L++
Sbjct: 921 LSSTHLYGRHLVM 933
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FNI+ + + IF +G I I++ DT +G F+ + + DAK A++ L
Sbjct: 305 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKALEQL 364
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 365 NGFELAGRPMKV 376
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 14 PPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--------TRGTAFVVYE 65
PPE + L+V+N+ F+ + E++ D FGK G + I I + KD + G FV Y+
Sbjct: 671 PPEPDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKKDPENPTNKLSMGYGFVRYK 730
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMS 98
+DA A+ L + + L + ++T MS
Sbjct: 731 RKHDADRALKTLQMSVLDGKSLELKRSERTLMS 763
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 1 MATIPLRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIR-----IGSSKD 55
M+ + + +++ + + + VRN+PF + +E+ ++F YG ++ +R +G+ K
Sbjct: 762 MSDVKTVRKKSKVTEQTSSKILVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTEKH 821
Query: 56 TRGTAFVVYEDIYDAKTAVDHLS-GFNVANRYLIVLYYQ 93
RG F+ Y DAK A L ++ R L++ + Q
Sbjct: 822 -RGFGFIEYYTKTDAKKAFKALCQSTHLYGRRLVLEWAQ 859
>gi|156839481|ref|XP_001643431.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114041|gb|EDO15573.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 376
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E N ++Y NLPF+ + +++D+F G ++ +++ + G A V YE++ DA+
Sbjct: 295 EKNELIYCSNLPFSTAKSDLFDLFETIGKLKNAELKFDQKGNPTGVAIVEYENVDDAQVC 354
Query: 74 VDHLSGFNVANRYLIVLY 91
VD L+ +N L + Y
Sbjct: 355 VDRLNNYNYGGCDLDISY 372
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F +++++Y +F +YG + + I + D+RG AFV Y+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
+A+ A+D L G NV R ++V +
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQF 91
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDH 76
L+V NLPF+ + +E+ + F +YG ++ ++I ++T RG AFV E + A+D
Sbjct: 2 TLFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVDLESETAEQAAIDD 61
Query: 77 LSGFNVANRYLIV 89
L G NR + V
Sbjct: 62 LDGATWNNREIRV 74
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
LYV N+ F+I+ E+ +F +G + Q++ S +RG FV Y D +AK A++ ++
Sbjct: 269 LYVGNIHFSITENELQQVFAPFGDLEFVQLQKEESGRSRGYGFVQYRDPNNAKEALERMN 328
Query: 79 GFNVANRYLIV 89
GF++ R + V
Sbjct: 329 GFDLGGRLIRV 339
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LY+ +L +NI+ E + IF +G I I++ ++ ++G FV Y + DAK A+D L
Sbjct: 205 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQL 264
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 265 NGFELAGRPMKV 276
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+ + PP + L++ NL FN + ++++++FG+YG + R+ + DT +G +V +
Sbjct: 349 GDQQSPP--SDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFS 406
Query: 66 DIYDAKTAVDHLSG 79
+ +AK A++ L+G
Sbjct: 407 SVDEAKAALEALNG 420
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 9 GNARLPPEVNR----VLYVRNLPFNISS---EEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
G+ LPP V+ +LYV +L FN++ ++++++FG+ + R + ++G AF
Sbjct: 323 GSINLPPGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAF 382
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
V Y+ DA+ A+ + GF +A R L V + K + K+ Q+ DE
Sbjct: 383 VQYKRAEDARMALQQMEGFELAGRTLRVNTVHE-KGTTKYTQQDSLDE 429
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+ V+NL F + +++++F +G ++ +R+ K RG AFV + + +A++A+D L
Sbjct: 703 IIVKNLAFESTRNDIFELFSPFGNLKSVRVPKKFDKSARGFAFVEFSTLKEAESAMDQLQ 762
Query: 79 GFNVANRYLIV 89
G ++ R L++
Sbjct: 763 GVHLLGRRLVM 773
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS--SKDTRGTAFVVYEDIYDAKTAVDHLS 78
+Y++NL ++ E + D+F ++G +++ + S ++G FV +E DA+ AVD ++
Sbjct: 193 VYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMN 252
Query: 79 GFNVANRYLIVLYYQ-----QTKMSKKFDQKKKD 107
G ++ + + V Q QT++ KF Q K+D
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQD 286
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD-TRGTAFVVYEDIYDAKTAVDHLSG 79
++V+NL +I S+ +YD F +G I ++ ++ ++G FV +E +A+ A++ ++G
Sbjct: 101 IFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNG 160
Query: 80 FNVANRYLIV 89
+ +R + V
Sbjct: 161 MFLNDRKVFV 170
>gi|407915850|gb|EKG09360.1| hypothetical protein MPH_13626 [Macrophomina phaseolina MS6]
Length = 218
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 16 EVNRVLYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTA 73
E + ++YVRNLP++ S+E++ ++F G + +I+ + +RGT V ++ +A+TA
Sbjct: 114 ERSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFDTAENAETA 173
Query: 74 VDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDELAKMQEK 116
+ +G+ R L + + + T + D + + Q++
Sbjct: 174 ISKFTGYQYGGRPLGLSFVKYTNVQAPTDAMETEATQGLTQDQ 216
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F +++++Y +F +YG + + I + D+RG AFV Y+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
+A+ A+D L G NV R ++V +
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQF 91
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 9 GNARLPPEVNRV------LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGT 59
GN LPP V+ LYV +L FN++ ++ +F +G + + R ++ ++G
Sbjct: 166 GNLNLPPGVSAPHGGAMQLYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDPTTGRSKGY 225
Query: 60 AFVVYEDIYDAKTAVDHLSGFNVANRYLIV 89
AFV Y+ DA+ A++ + GF +A R L V
Sbjct: 226 AFVQYKRAEDARMAMEQMEGFELAGRQLKV 255
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 10 NARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKD--TRGTAFVVYEDI 67
NA+ P + + ++NLPF +++E+ +F YG I+ +RI + RG FV +
Sbjct: 773 NAKSKP--SSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTE 830
Query: 68 YDAKTAVDHLSGFNVANRYLIVLYYQQTK 96
+AK A++ L + R+L++ Y +Q K
Sbjct: 831 EEAKNAMEALGSSHFYGRHLVLQYAEQDK 859
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG---SSKDTRGTAFVVYEDIYDAKTAVDHL 77
+++RNL + E++ +F KYG I +I I SK + G AF++Y +A TA++ +
Sbjct: 345 IFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAFILYLIPENAVTALNEM 404
Query: 78 SGFNVANRYLIVLYYQQ 94
G R + VL +Q
Sbjct: 405 DGKVFQGRIIHVLPAKQ 421
>gi|342181735|emb|CCC91214.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 177
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V LPF + +YD+F YG + I I S ++G AFV Y + +A A+
Sbjct: 63 LFVGQLPFETDEKRLYDLFSAYGTVEHIHILRDSQNRSKGAAFVTYSSVEEADAAI---- 118
Query: 79 GFNVANRY 86
F + NRY
Sbjct: 119 -FTLHNRY 125
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LY+ +L +NI+ E + IF +G I I++ ++ ++G FV Y + DAK A+D L
Sbjct: 69 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQL 128
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 129 NGFELAGRPMKV 140
>gi|189240798|ref|XP_968550.2| PREDICTED: similar to transformer-2 protein A [Tribolium castaneum]
Length = 264
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 15 PEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAK 71
P+ +R L V L + +E+Y IF KYG + ++++ + +RG +FV +E+ DAK
Sbjct: 77 PKPSRCLGVFGLSVYTTEDELYHIFSKYGPLERVQVVIDAKTGRSRGFSFVYFENTDDAK 136
Query: 72 TAVDHLSGFNVANRYLIVLY 91
A D SG + + + V Y
Sbjct: 137 VAKDQCSGMKINGKNIRVDY 156
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 9 GNARLPPEVNR----VLYVRNLPFNISS---EEMYDIFGKYGAIRQIRIGSSKDTRGTAF 61
G+ LPP V+ +LYV +L FN++ ++++++FG+ + R + ++G AF
Sbjct: 323 GSINLPPGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAF 382
Query: 62 VVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQTKMSKKFDQKKKDDE 109
V Y+ DA+ A+ + GF +A R L V + K + K+ Q+ DE
Sbjct: 383 VQYKRAEDARMALQQMEGFELAGRTLRVNTVHE-KGTTKYTQQDSLDE 429
>gi|357473075|ref|XP_003606822.1| Flowering time control protein FPA [Medicago truncatula]
gi|355507877|gb|AES89019.1| Flowering time control protein FPA [Medicago truncatula]
Length = 973
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLSGF 80
LYV NL +++ ++ D+F +YGA+ + +S R AFV ++ I DAK A + L GF
Sbjct: 29 LYVANLSPDVTDSDLMDLFVQYGALDSV---TSYSARNYAFVFFKRIDDAKAAKNALQGF 85
Query: 81 NVANRYLIVLYYQQTKMSKKF 101
N L + + + K K+
Sbjct: 86 NFRGNSLRIEFARPAKTCKQL 106
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F +++++Y +F +YG + + I + D+RG AFV Y+
Sbjct: 9 PPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
+A+ A+D L G NV R ++V +
Sbjct: 69 EAQKAIDRLDGRNVDGRNIMVQF 91
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LY+ +L +NI+ E + IF +G I I++ ++ ++G FV Y + DAK A+D L
Sbjct: 205 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQL 264
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 265 NGFELAGRPMKV 276
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSK---DTRGTAFVVYEDIY 68
PP++ L V N+ F S+++++ +F +YG + I I + D+RG AF Y+
Sbjct: 9 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKYAD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLY 91
+A+ AV+ L G NV RY++V +
Sbjct: 69 EAQKAVERLDGKNVDGRYIMVQF 91
>gi|410964145|ref|XP_003988616.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Felis catus]
Length = 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDH 76
+YV NLPF++++ ++Y IF KYG + ++ I KDTR G AF+++ D A+
Sbjct: 11 TVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 70
Query: 77 LSGFNVANRYL 87
++ V R +
Sbjct: 71 INNKQVFGRVI 81
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 14 PPEVNRV--LYVRNLPFNISSEEMYDIFGKYGAIRQI---RIGSSKDTRGTAFVVYEDIY 68
PP++ L V N+ F +++++Y +F +YG + I R S ++RG AFV Y+ +
Sbjct: 9 PPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFVRYKHVD 68
Query: 69 DAKTAVDHLSGFNVANRYLIVLYYQQTKMSKK 100
+A+ A+D L G + R + V + + + +K
Sbjct: 69 EAQKAIDRLDGMTIDGRQIAVQFAKYGRNDEK 100
>gi|224068763|ref|XP_002302819.1| predicted protein [Populus trichocarpa]
gi|222844545|gb|EEE82092.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI--GSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
L+V LP N+S E+ D+F KYG I+ ++I GS + ++G AF+ YE A A++ ++
Sbjct: 109 LFVGMLPKNVSEAELSDLFSKYGIIKDLQILRGSQQTSKGCAFLKYETKEQAHAALEDIN 168
Query: 79 G 79
G
Sbjct: 169 G 169
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 9 GNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYE 65
G+ R PP + L++ N+ F S+E + ++F +YG+I ++ + + +DT +G +V +
Sbjct: 315 GDKRSPP--SNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFS 372
Query: 66 DIYDAKTAVDHLSGFNVANRYLIVLY 91
+A A++ L+G ++ R + + Y
Sbjct: 373 SQQEATAALEALNGQDIGGRAIRIDY 398
>gi|385305976|gb|EIF49917.1| poly(a+) rna-binding protein [Dekkera bruxellensis AWRI1499]
Length = 439
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIR--QIRIGSSKDTRGTAFVVYEDIYDAKTAVDHLS 78
+YV NLPF ++EE DIF G ++ ++R+G + +RG ++Y + DAK ++
Sbjct: 174 VYVGNLPFTTNNEEFQDIFKNXGDVKSAEVRMGRNGRSRGFGIIIYGNEEDAKKTIEAFD 233
Query: 79 GFNVANRYLIVLYYQQTKMSKKFDQK-KKDDELAK 112
G V R + V + ++ + D ++D E +K
Sbjct: 234 GQVVDGRTIQVRSGRSSRSAPGADAGVRRDAEPSK 268
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR--GTAFVVYEDIYDAKTAVDHL 77
L+V NLP+ + ++YD+FG + + I R G A V D A+ L
Sbjct: 285 TLFVSNLPWETTQSDLYDLFGSIATVVKAEIQYDDRNRXSGNAVVELGDEEXXANALAQL 344
Query: 78 SGFNVANRYLIVLY 91
G+ NR L + Y
Sbjct: 345 DGYEYGNRDLHISY 358
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEM---YDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LYV +L F+I+ E + ++ FGK AI+ I + ++G F+ Y + DAK A++ L
Sbjct: 367 LYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQL 426
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 427 NGFELAGRPMKV 438
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRI---GSSKDTRGTAFVVYEDIYDAKTAVDHL 77
LY+ +L +NI+ E + IF +G I I++ ++ ++G FV Y + DAK A+D L
Sbjct: 69 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQL 128
Query: 78 SGFNVANRYLIV 89
+GF +A R + V
Sbjct: 129 NGFELAGRPMKV 140
>gi|332026997|gb|EGI67093.1| RNA-binding motif protein, X-linked 2 [Acromyrmex echinatior]
Length = 172
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
++V LP+N++ ++ IF +YG + I + KDT +G F+ YED AVD+
Sbjct: 69 IFVGGLPYNLTEGDVIAIFSQYGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNF 128
Query: 78 SGFNVANRYLIVLY---YQQTKMSKKFDQKKKD 107
+G + R + V + Y+ K SK D++ ++
Sbjct: 129 NGIKILGRVIRVDHVSNYKAPKDSKNIDEETRN 161
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIG-----SSKDTRGTAFVVYEDIYDAKTAVD 75
+ +RN+PF + +E+++IF +G I+ +R+ S+ RG AFV Y DAK+A D
Sbjct: 766 ILIRNVPFQANRKELHEIFRAFGEIKTLRLPQKLTVGSEQHRGFAFVDYYSKADAKSAFD 825
Query: 76 HLS-GFNVANRYLIVLYYQQTKMSKKFD 102
L ++ R L++ + Q+ ++ D
Sbjct: 826 ALCQSTHLYGRRLVLEWADQSDENEDID 853
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSS---KDTRGTAFVVYEDIYDAKTAVDHL 77
++VRNLP+ +S EE+ +F KYG I ++ + + +G A + + A A L
Sbjct: 354 IFVRNLPYVVSEEELTSLFEKYGPIAEVSMPIDPILRQPKGFAVITFVMPEHAVKAYTEL 413
Query: 78 SGFNVANRYLIVLYYQQTKMSKKFDQ 103
G R + +L + K+ ++ D+
Sbjct: 414 DGTAFCGRMMHILPAKMEKLEEEIDE 439
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT--RGTAFVVYEDIYDAKTAVDHLS 78
L V+NLP ++ E++ D+FG+ G + +++ +KD R FV Y A A +H
Sbjct: 4 LIVKNLPNKVTVEKLKDLFGEKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAAAAREHFD 63
Query: 79 G 79
G
Sbjct: 64 G 64
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 14 PPEVNR---VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDI 67
PP+V LYV +L FNI+ + + IF +G I I++ DT +G F+ + +
Sbjct: 279 PPKVTSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNA 338
Query: 68 YDAKTAVDHLSGFNVANRYLIV 89
DAK A++ L+GF +A R + V
Sbjct: 339 DDAKKALEQLNGFELAGRPMKV 360
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGS---SKDTRGTAFVVYEDIYDAKTAVDHL 77
L VRN+P + EE+ F ++G +R + I + + RG AFV + D Y+A A H+
Sbjct: 53 LLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHM 112
Query: 78 SGFNVANRYL-IVLYYQQTKMSKKFDQKKK 106
+G A R + +VL + K ++ Q+ +
Sbjct: 113 NGKKFAGREITVVLAAESRKRPEQMRQRSR 142
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 17 VNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTRGTAFVVYEDIYDAKTAVDH 76
+R +YV NLP +I +E+ D+F KYG I I + G AFV +ED DA+ A+
Sbjct: 5 ASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRG 64
Query: 77 LSGFNVANRYLIV 89
G++ L V
Sbjct: 65 RDGYDFDGHRLRV 77
>gi|345315508|ref|XP_001517482.2| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ornithorhynchus anatinus]
Length = 217
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 20 VLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDTR---GTAFVVYEDIYDAKTAVDH 76
+YV NLPF++++ ++Y IF KYG + ++ I KDTR G AF+++ D A+
Sbjct: 11 TVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKGKGVAFILFLDKESAQNCSRT 70
Query: 77 LSGFNVANRYL 87
L+ + R +
Sbjct: 71 LNNKQLFGRVI 81
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FN++ +++ +F +G I + + + T +G AFV +++++DAK A++ +
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 78 SGFNVANRYLIV 89
+GF +A R L V
Sbjct: 512 NGFQLAGRALRV 523
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 21 LYVRNLPFNISSEEMYDIFGKYGAIRQIRIGSSKDT---RGTAFVVYEDIYDAKTAVDHL 77
LYV +L FN++ +++ +F +G I + + + T +G AFV +++++DAK A++ +
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 78 SGFNVANRYLIV 89
+GF +A R L V
Sbjct: 512 NGFQLAGRALRV 523
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,786,212,177
Number of Sequences: 23463169
Number of extensions: 63400159
Number of successful extensions: 217183
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2571
Number of HSP's successfully gapped in prelim test: 12002
Number of HSP's that attempted gapping in prelim test: 201024
Number of HSP's gapped (non-prelim): 22894
length of query: 124
length of database: 8,064,228,071
effective HSP length: 90
effective length of query: 34
effective length of database: 5,952,542,861
effective search space: 202386457274
effective search space used: 202386457274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)