Citrus Sinensis ID: 033231
Local Sequence Feature Prediction
| Prediction and Method | Result |
|---|
|
|
Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2F/RPB6 is part of the clamp element and togther with parts of RPB1 and RPB2 forms a pocket to which the RPB4-RPB7 subcomplex binds. | probable | O88828 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2F/RPB6 is part of the clamp element and togther with parts of RPB1 and RPB2 forms a pocket to which the RPB4-RPB7 subcomplex binds. | probable | Q5R592 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II, and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2F/RPB6 is part of the clamp element and togther with parts of RPB1 and RPB2 forms a pocket to which the RPB4-RPB7 subcomplex binds. | probable | P61217 |
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 2.-.-.- | Transferases. | probable | |||||||||
| 2.7.-.- | Transferring phosphorous-containing groups. | probable | |||||||||
| 2.7.7.- | Nucleotidyltransferases. | probable | |||||||||
| 2.7.7.6 | DNA-directed RNA polymerase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
|
Template: 1QKL, chain A Confidence level:very confident Coverage over the Query: 22-115 View the alignment between query and template View the model in PyMOL |