Query 033233
Match_columns 124
No_of_seqs 223 out of 1122
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 18:57:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033233.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033233hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t8ka_ a.28.1.1 (A:) Acyl car 99.8 1.3E-20 9.3E-25 119.4 7.1 76 47-122 2-77 (77)
2 d1vkua_ a.28.1.1 (A:) Acyl car 99.8 2.7E-19 2E-23 114.4 7.3 80 42-122 3-82 (85)
3 d1f80d_ a.28.1.1 (D:) Acyl car 99.8 1.5E-19 1.1E-23 113.5 5.6 72 47-118 3-74 (74)
4 d1klpa_ a.28.1.1 (A:) Acyl car 99.8 1.5E-18 1.1E-22 116.8 8.3 80 42-121 2-81 (115)
5 d1dv5a_ a.28.1.3 (A:) apo-D-al 99.7 1.3E-17 9.2E-22 106.0 6.7 76 45-120 2-79 (80)
6 d2af8a_ a.28.1.1 (A:) Actinorh 99.7 4.6E-17 3.4E-21 104.7 6.7 81 40-121 2-82 (86)
7 d1nq4a_ a.28.1.1 (A:) Oxytetra 99.7 6.4E-17 4.7E-21 105.9 6.9 80 41-121 2-81 (95)
8 d1or5a_ a.28.1.1 (A:) Frenolic 99.6 1.4E-15 1E-19 97.0 5.3 80 42-123 2-81 (82)
9 d2jq4a1 a.28.1.1 (A:1-83) Hypo 99.5 2.3E-15 1.7E-19 95.7 5.1 72 49-121 2-77 (83)
10 d2gdwa1 a.28.1.2 (A:8-83) Pept 99.3 2.6E-12 1.9E-16 80.3 7.2 69 47-118 7-75 (76)
11 d2pnga1 a.28.1.1 (A:1-76) Type 99.2 6.6E-13 4.8E-17 83.2 1.8 67 50-118 7-74 (76)
12 d2gyc31 a.108.1.1 (3:2-48) Rib 90.4 0.091 6.7E-06 28.4 2.4 19 81-99 15-33 (47)
13 d1v32a_ a.42.1.1 (A:) Hypothet 80.5 0.56 4.1E-05 29.2 2.7 60 38-97 30-92 (101)
14 d1dd3a1 a.108.1.1 (A:1-57) Rib 73.4 0.9 6.5E-05 25.3 1.9 21 79-99 13-33 (57)
15 d1uhra_ a.42.1.1 (A:) SWI/SNF 71.6 0.72 5.2E-05 28.2 1.3 71 25-96 10-83 (93)
16 d2oaia1 d.145.1.4 (A:5-91) Hem 68.0 3.7 0.00027 24.0 4.2 34 88-121 21-54 (87)
17 d1wota_ d.218.1.5 (A:) Unnamed 64.9 11 0.0008 22.3 6.5 65 40-105 1-81 (98)
18 d1zavu1 a.108.1.1 (U:1-30) Rib 59.9 3.3 0.00024 19.7 2.2 14 83-96 17-30 (30)
19 d2plia1 d.145.1.4 (A:5-88) Unc 55.6 9.5 0.00069 22.0 4.4 30 89-121 22-51 (84)
20 d2rk5a1 d.145.1.4 (A:5-88) Put 54.8 10 0.00073 21.7 4.4 31 88-121 16-46 (84)
21 d2r2za1 d.145.1.4 (A:5-88) Put 54.1 10 0.00076 21.7 4.4 30 88-120 19-48 (84)
22 d2o3ga1 d.145.1.4 (A:180-255) 54.0 6.9 0.0005 22.2 3.4 33 88-121 11-43 (76)
23 d2o1ra1 d.145.1.4 (A:1-78) Hyp 48.4 12 0.00089 21.1 4.0 31 88-121 16-46 (78)
24 d1v31a_ a.42.1.1 (A:) Hypothet 46.7 2.4 0.00018 25.5 0.5 71 25-96 10-83 (93)
25 d1af7a1 a.58.1.1 (A:11-91) Che 43.5 24 0.0017 19.7 6.0 47 75-121 8-67 (81)
26 d2plsa1 d.145.1.4 (A:345-428) 41.1 26 0.0019 19.8 4.7 34 88-121 17-51 (84)
27 d2p13a1 d.145.1.4 (A:431-515) 39.4 26 0.0019 19.8 4.5 33 88-121 21-53 (85)
28 d3deda1 d.145.1.4 (A:341-427) 39.1 30 0.0022 19.6 4.9 33 89-121 20-54 (87)
29 d1q1va_ a.159.4.1 (A:) DEK C-t 37.4 31 0.0023 19.3 5.9 42 44-103 13-55 (70)
30 d1h99a1 a.142.1.1 (A:54-168) T 34.9 11 0.00083 22.3 2.4 22 83-104 79-100 (115)
31 d1h99a2 a.142.1.1 (A:169-275) 32.7 13 0.00098 21.8 2.4 21 84-104 75-95 (107)
32 d2p3ha1 d.145.1.4 (A:5-102) Un 32.2 34 0.0024 20.1 4.3 29 89-120 20-48 (98)
33 d2icga1 d.369.1.1 (A:1-158) Un 28.0 15 0.0011 23.0 2.1 19 84-102 27-45 (158)
34 d2p4pa1 d.145.1.4 (A:1-82) Hyp 27.2 49 0.0036 18.4 4.5 33 88-121 16-48 (82)
35 d1d0qa_ g.41.3.2 (A:) Zinc-bin 27.1 19 0.0014 21.3 2.4 22 83-104 80-101 (102)
36 d1rr7a_ a.4.1.14 (A:) Middle o 26.6 33 0.0024 20.1 3.5 42 47-102 4-48 (94)
37 d1sr9a1 a.5.7.1 (A:437-491) 2- 24.6 20 0.0015 19.2 1.9 16 88-103 2-17 (55)
38 d2prva1 d.369.1.1 (A:1-152) Un 23.8 20 0.0015 22.1 2.2 19 85-103 25-43 (152)
39 d2c5ra1 a.251.1.1 (A:66-129) E 23.7 46 0.0034 18.1 3.4 32 89-120 10-46 (64)
40 d1zuna1 c.26.2.2 (A:1-211) Sul 22.5 57 0.0041 19.8 4.3 26 76-101 34-59 (211)
No 1
>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]}
Probab=99.82 E-value=1.3e-20 Score=119.41 Aligned_cols=76 Identities=46% Similarity=0.670 Sum_probs=72.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCCC
Q 033233 47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHPM 122 (124)
Q Consensus 47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~~ 122 (124)
+|.++|++++++.+|+++++|+++++|.++||||||++++++..+|++||++||++++.++.|++++++||.++++
T Consensus 2 ~I~~~v~~iia~~l~i~~~~i~~~~~l~~dLg~DSl~~~el~~~iE~~f~i~i~~~~~~~~~Tv~dlv~~i~~~~A 77 (77)
T d1t8ka_ 2 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA 77 (77)
T ss_dssp CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHCCCHHHcCCCCcchhccccchhHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHHccC
Confidence 4789999999999999999999999998789999999999999999999999999999999999999999998864
No 2
>d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]}
Probab=99.77 E-value=2.7e-19 Score=114.43 Aligned_cols=80 Identities=26% Similarity=0.471 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
.|+++++.++|++++++.+|+++++|+++++|. ++|+||+++++++..||++||++|+.+++.++.|++++++||.+++
T Consensus 3 ~m~~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~-dlG~DSl~~v~l~~~ie~~f~i~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (85)
T d1vkua_ 3 HMERKKLIAKFVEIASEKMGKDLETVDEENTFK-ELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL 81 (85)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCCCCSCCTTSBTT-TTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHH-HhcCcchHHHHHHHHHHHHccCCCCHHHHHHcCCHHHHHHHHHHHH
Confidence 489999999999999999999999999999995 9999999999999999999999999999999999999999998765
Q ss_pred C
Q 033233 122 M 122 (124)
Q Consensus 122 ~ 122 (124)
+
T Consensus 82 ~ 82 (85)
T d1vkua_ 82 E 82 (85)
T ss_dssp H
T ss_pred h
Confidence 3
No 3
>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]}
Probab=99.77 E-value=1.5e-19 Score=113.53 Aligned_cols=72 Identities=39% Similarity=0.637 Sum_probs=69.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233 47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY 118 (124)
Q Consensus 47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~ 118 (124)
++.++|++++++.+++++++++++++|.++||+|||++++++..||++||++||.+++.++.|++++++||+
T Consensus 3 dv~~~v~~iia~~l~~~~~~i~~~~~~~~DlG~DSl~~vel~~~le~~f~i~i~~~~~~~~~Tv~~l~~~ie 74 (74)
T d1f80d_ 3 DTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQ 74 (74)
T ss_dssp HHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCcCHHHcCCCccHHHhcCccHhHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHC
Confidence 789999999999999999999999999878999999999999999999999999999999999999999973
No 4
>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.75 E-value=1.5e-18 Score=116.81 Aligned_cols=80 Identities=29% Similarity=0.569 Sum_probs=76.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+|+++++.+.|++++++.+|+++++|+++++|.++|||||++.++|+..||++||+.|+..++.++.|+++|++||.+..
T Consensus 2 ~~t~~~i~~~l~~iv~~~l~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~le~~f~i~i~~~~~~~~~Tv~~l~~~l~~~~ 81 (115)
T d1klpa_ 2 PVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCccccCcccchhhhcccchhHHHHHHHHHHHHHCCCCCHHHHHhCccHHHHHHHHHHHh
Confidence 68999999999999999999999999999999878999999999999999999999999999999999999999997653
No 5
>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}
Probab=99.70 E-value=1.3e-17 Score=105.98 Aligned_cols=76 Identities=21% Similarity=0.296 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc--cCccHHHHHHHHHcC
Q 033233 45 KEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACNLAIEYIYNH 120 (124)
Q Consensus 45 ~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~dlv~~I~~~ 120 (124)
.++|.++|++++++.+|.+...++++++|.+.+|+|||++++++..||++||++||..++. ++.|++++++||.+.
T Consensus 2 ~e~I~~~v~~il~~~l~~~~~~i~~d~~l~e~gglDSl~~vel~~~ie~~fgi~i~~~~l~~~~~~Tv~~l~~~v~~l 79 (80)
T d1dv5a_ 2 DEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CHHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhccchhhcCCCccccccCCCCHHHHHHHHHHHHHHHCCCCCHHHhhHHhCCCHHHHHHHHHHc
Confidence 3689999999999999999999999999986678999999999999999999999999974 899999999999865
No 6
>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]}
Probab=99.67 E-value=4.6e-17 Score=104.74 Aligned_cols=81 Identities=26% Similarity=0.335 Sum_probs=76.2
Q ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHc
Q 033233 40 DDHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYN 119 (124)
Q Consensus 40 ~~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~ 119 (124)
...|+.+++.+.+++.+.+.+|+++++++.+++|. ++|+||++.++++..|+++||+++|...+.++.|++++++||.+
T Consensus 2 ~t~~t~d~l~~~l~e~~~~~~g~~~~~i~~d~~f~-dlG~DSl~~~~l~~~l~~~~g~~l~~~~~~~~~Tv~~l~~~i~~ 80 (86)
T d2af8a_ 2 ATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFE-DIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLING 80 (86)
T ss_dssp CCCCCHHHHHHHHHHTTCCCSCCCCSSCSCSSSHH-HHTCSSHHHHHHHHHHHHHHTCCCCCSTTTTCCCHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHccccCCCccccccCCCHH-HcCCCHHHHHHHHHHHHHHHccCcCHHHHHcCCCHHHHHHHHHH
Confidence 35678999999999999999999999999999995 99999999999999999999999999999999999999999987
Q ss_pred CC
Q 033233 120 HP 121 (124)
Q Consensus 120 ~~ 121 (124)
++
T Consensus 81 ~l 82 (86)
T d2af8a_ 81 AL 82 (86)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 7
>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]}
Probab=99.66 E-value=6.4e-17 Score=105.90 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=75.9
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233 41 DHLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120 (124)
Q Consensus 41 ~~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~ 120 (124)
..|+.+++.+.+++++.+.+|++++++..+++|. +||+|||+.++|+..||++||++|+...+.++.|++++++||.++
T Consensus 2 ~~~t~d~l~~~lre~~~~~~~~~~~~i~~d~~f~-dlG~DSl~~~el~~~le~~~gv~l~~~~~~~~~Ti~~l~~~l~~~ 80 (95)
T d1nq4a_ 2 TLLTLSDLLTLLRECAGEEESIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNAS 80 (95)
T ss_dssp CCCCHHHHHHHHHHHHTCSSTTCSCSCCSSSCHH-HHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHhHHhCCChhhcccCCCHH-HcCCcHHHHHHHHHHHHHHhcCCCCHHHHhcCCCHHHHHHHHHHh
Confidence 3678999999999999999999999999999995 999999999999999999999999999999999999999999765
Q ss_pred C
Q 033233 121 P 121 (124)
Q Consensus 121 ~ 121 (124)
+
T Consensus 81 l 81 (95)
T d1nq4a_ 81 L 81 (95)
T ss_dssp H
T ss_pred c
Confidence 4
No 8
>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]}
Probab=99.56 E-value=1.4e-15 Score=97.05 Aligned_cols=80 Identities=21% Similarity=0.289 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 42 HLTKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 42 ~M~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
.|+.+++.+.|.+.+....+.+. +++.+++|. ++|+|||+.+++...||++||++||...+.++.|++++++||....
T Consensus 2 ~~T~e~l~~il~e~~g~~~~~~~-~~d~d~~f~-dlG~DSl~~~el~~~le~~~g~~l~~~~~~~~~Ti~~l~~~v~~~~ 79 (82)
T d1or5a_ 2 ALTVDDLKKLLAETAGEDDSVDL-AGELDTPFV-DLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP 79 (82)
T ss_dssp CSCHHHHHHHHHHHSCCCSSCCG-GGCSSSCHH-HHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred cccHHHHHHHHHHHhCCCccccc-CCCcCcCHH-HcCCChHhHHHHHHHHHHHHhCcCCHHHHHcCCCHHHHHHHHHhcc
Confidence 46777776666666655555444 367888995 9999999999999999999999999999999999999999999877
Q ss_pred CC
Q 033233 122 MA 123 (124)
Q Consensus 122 ~a 123 (124)
++
T Consensus 80 a~ 81 (82)
T d1or5a_ 80 AT 81 (82)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 9
>d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.54 E-value=2.3e-15 Score=95.74 Aligned_cols=72 Identities=15% Similarity=0.273 Sum_probs=63.7
Q ss_pred HHHHHHHHhhcC--CCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcc--cCccHHHHHHHHHcCC
Q 033233 49 IDRVLSVVKCFP--KVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAV--RIDACNLAIEYIYNHP 121 (124)
Q Consensus 49 ~~~l~~il~e~l--~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~--~~~Tv~dlv~~I~~~~ 121 (124)
.++|++++++.+ ++++++|+++++|. ++|+|||++++++..||++||++||.+++. .+.|+++++++|.+..
T Consensus 2 ~e~i~~il~~~~~l~~~~~~i~~~~~f~-dlG~DSl~~~~l~~~le~~f~v~i~~~~l~~~~~~Ti~~la~~i~~~~ 77 (83)
T d2jq4a1 2 NATIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLIL 77 (83)
T ss_dssp HHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCHHHcCCCCCHH-HHhCccHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhHHHHHHHHHHHH
Confidence 467888998875 45788999999997 999999999999999999999999999975 5799999999997654
No 10
>d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]}
Probab=99.31 E-value=2.6e-12 Score=80.35 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233 47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY 118 (124)
Q Consensus 47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~ 118 (124)
++.++|.+++++++|++ .++.+++|. ++|.|||.+++++..|+++||+.++..++.+..|+++++++|.
T Consensus 7 ~~E~~l~~i~~~vL~~~--~i~~~~~f~-~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~~pTi~~LA~~i~ 75 (76)
T d2gdwa1 7 AVESKLAEIWERVLGVS--GIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVA 75 (76)
T ss_dssp HHHHHHHHHHHHHTTSS--CCCTTTTSS-TTTCTTHHHHHHHHHHHHTTSSCCTTHHHHHSCSHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCC--CCCCCCCHH-HcCCChHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHhc
Confidence 68889999999999984 589999997 9999999999999999999999999999999999999999985
No 11
>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.25 E-value=6.6e-13 Score=83.16 Aligned_cols=67 Identities=28% Similarity=0.325 Sum_probs=59.6
Q ss_pred HHHHHHHhhcCCC-CCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCccChhhcccCccHHHHHHHHH
Q 033233 50 DRVLSVVKCFPKV-DPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEAVRIDACNLAIEYIY 118 (124)
Q Consensus 50 ~~l~~il~e~l~v-~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~ 118 (124)
+.|.+++++++|+ ++++|+++.+|. ++|+|||.++++...|+++||++++..++.+ .|+++|.++..
T Consensus 7 ~~l~~~va~~Lgi~~~~~I~~~~~f~-~lG~DSl~a~el~~~i~~~~g~~l~~~~l~~-~Ti~~L~el~a 74 (76)
T d2pnga1 7 RDLVKAVAHILGIRDLAGINLDSSLA-DLGLDSLMGVEVRQILEREHDLVLPIREVRQ-LTLRKLQEMSS 74 (76)
T ss_dssp CCGGGTHHHHHTCSSCTTSCSSSCHH-HHTCSSHHHHHHHHHHHHHTCCCCCHHHHTT-CCSHHHHHTSC
T ss_pred HHHHHHHHHHhccCCHhhCCCCCCHH-HhCCcHHHHHHHHHHHHHHhCCCCCHHHHHH-hhHHHHHHHHh
Confidence 4467788888998 589999999997 9999999999999999999999999999876 69999988654
No 12
>d2gyc31 a.108.1.1 (3:2-48) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=90.40 E-value=0.091 Score=28.44 Aligned_cols=19 Identities=37% Similarity=0.641 Sum_probs=16.7
Q ss_pred hhhHHHHHHHHHHHhCCcc
Q 033233 81 SLDNVEIVMALEEEFKLEI 99 (124)
Q Consensus 81 SL~~veli~~lEe~fgI~I 99 (124)
=+++++|+.++|++||+.-
T Consensus 15 VmdvveLi~amEEKFGVsa 33 (47)
T d2gyc31 15 VMDVVELISAMEEKFGVSA 33 (47)
T ss_dssp HHHHHHHHHHHHHHTCTTT
T ss_pred HHHHHHHHHHHHHHhCcch
Confidence 4689999999999999964
No 13
>d1v32a_ a.42.1.1 (A:) Hypothetical protein AT5G08430 (rafl09-47-k03) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=80.51 E-value=0.56 Score=29.23 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=49.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhhc-CC--CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCC
Q 033233 38 SHDDHLTKEEVIDRVLSVVKCF-PK--VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKL 97 (124)
Q Consensus 38 ~~~~~M~~~ei~~~l~~il~e~-l~--v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI 97 (124)
..+..|++.++...|++.|.+. +. .+...|..|..|..-+|.+.+.+.+|...|...|--
T Consensus 30 ~~~~~~sR~eVtk~iw~YIK~nnLqdp~nkr~I~~D~~L~~Lfg~~~v~~f~i~k~l~~H~~~ 92 (101)
T d1v32a_ 30 DTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKE 92 (101)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCS
T ss_pred CCcccCCHHHHHHHHHHHHHHhcCCCCccCCEEccCHHHHHHhCCCcccHHHHHHHHHHHcCC
Confidence 3457899999999999999985 32 345568999999888999999999999999888843
No 14
>d1dd3a1 a.108.1.1 (A:1-57) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.38 E-value=0.9 Score=25.30 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=17.2
Q ss_pred CChhhHHHHHHHHHHHhCCcc
Q 033233 79 LDSLDNVEIVMALEEEFKLEI 99 (124)
Q Consensus 79 lDSL~~veli~~lEe~fgI~I 99 (124)
+.=+.+.||+.++|++||+.-
T Consensus 13 ~tv~El~ELvKalEekfGVsA 33 (57)
T d1dd3a1 13 LTVSELAELVKKLEDKFGVTA 33 (57)
T ss_dssp SCHHHHHHHHHHHHHHHCHHH
T ss_pred ccHHHHHHHHHHHHHHhCccc
Confidence 334678999999999999963
No 15
>d1uhra_ a.42.1.1 (A:) SWI/SNF related regulator of chromatin (BRG1-associated factor 60a) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.62 E-value=0.72 Score=28.19 Aligned_cols=71 Identities=14% Similarity=0.091 Sum_probs=51.1
Q ss_pred cccchhhhhccccCCCCCCCHHHHHHHHHHHHhhc-CC--CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhC
Q 033233 25 QRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCF-PK--VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFK 96 (124)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~M~~~ei~~~l~~il~e~-l~--v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fg 96 (124)
++...++.+...-.. ..+++.+|...|++.|.+. +. -+...|..|..|..-+|.|.+.+.+|...|...|-
T Consensus 10 ~~~~lS~~La~~lg~-~~~sR~~v~k~iw~YIk~n~Lqdp~nkr~I~cD~~L~~lfg~~~v~~~~l~~~L~~Hl~ 83 (93)
T d1uhra_ 10 PQFKLDPRLARLLGI-HTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLM 83 (93)
T ss_dssp CEEEECTTHHHHTCC-SEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEE
T ss_pred CCCCCCHHHHHHHCC-CCcCHHHHHHHHHHHHHHhcCCCCCCCCEEecCHHHHHHhCCCeecHHHHHHHHHhhCC
Confidence 333344444333333 3578999999999999986 32 24566889999987889999999988888887763
No 16
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa [TaxId: 2371]}
Probab=67.98 E-value=3.7 Score=24.02 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=20.9
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||+++|..+-.++.|++.++-....+.
T Consensus 21 l~dl~~~l~~~l~~~e~~~~~Tl~G~i~~~lg~i 54 (87)
T d2oaia1 21 IEELREVLGAELPDGEENNYHTLAGMCISYFGRI 54 (87)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHHSSC
T ss_pred HHHHHHHHCCCCCcccccccccHHHHHHHHhCcC
Confidence 3478889999999877778999999876655544
No 17
>d1wota_ d.218.1.5 (A:) Unnamed putative nucleotidyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=64.93 E-value=11 Score=22.28 Aligned_cols=65 Identities=18% Similarity=0.208 Sum_probs=41.5
Q ss_pred CCCCCHHHHH---HHHHHHHhhcCCCC---------CCCCCCCCCc---c-cccCCChhhHHHHHHHHHHHhCCccChhh
Q 033233 40 DDHLTKEEVI---DRVLSVVKCFPKVD---------PSQVTPDVHF---Q-KDLGLDSLDNVEIVMALEEEFKLEIPDKE 103 (124)
Q Consensus 40 ~~~M~~~ei~---~~l~~il~e~l~v~---------~~~I~~dt~l---~-~dLGlDSL~~veli~~lEe~fgI~I~~~~ 103 (124)
|+.|+.+++. +.+..++.++ |+. .++.++++++ . -+-+.+-...+++...+++.++++++--.
T Consensus 1 ~~~m~~e~l~~~~~~i~~i~~k~-~v~~v~lFGS~arg~~~~~SDIDi~V~~~~~~~~~~~~~l~~~le~~l~~~VDlv~ 79 (98)
T d1wota_ 1 GSHMDLETLRARREAVLSLCARH-GAVRVRVFGSVARGEAREDSDLDLLVAFEEGRTLLDHARLKLALEGLLGVRVDIVS 79 (98)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHH-TCSSCEECSHHHHTCCCTTCCCEEEECCCSSCCHHHHHHHHHHHHHHSCSCCEEEE
T ss_pred CCcCCHHHHHHHHHHHHHHHHHc-CCcEEEEECCccCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEeE
Confidence 5679988776 4566666653 332 2445666665 1 12245567889999999999998775443
Q ss_pred cc
Q 033233 104 AV 105 (124)
Q Consensus 104 l~ 105 (124)
+.
T Consensus 80 ~~ 81 (98)
T d1wota_ 80 ER 81 (98)
T ss_dssp TT
T ss_pred hh
Confidence 33
No 18
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=59.94 E-value=3.3 Score=19.66 Aligned_cols=14 Identities=36% Similarity=0.600 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHhC
Q 033233 83 DNVEIVMALEEEFK 96 (124)
Q Consensus 83 ~~veli~~lEe~fg 96 (124)
.+.+++..+|++||
T Consensus 17 elaelvk~ledkfg 30 (30)
T d1zavu1 17 ELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhcC
Confidence 45688889999987
No 19
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=55.58 E-value=9.5 Score=21.97 Aligned_cols=30 Identities=13% Similarity=0.066 Sum_probs=23.1
Q ss_pred HHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 89 MALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 89 ~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
..+++.||+++|.+ ++.|++.++-....+.
T Consensus 22 ~dl~~~~~~~l~~~---~~~TigG~i~~~l~~i 51 (84)
T d2plia1 22 EDINTFFGTEYSSE---EADTIGGLVIQELGHL 51 (84)
T ss_dssp HHHHHHHCCCCCCS---SCCBHHHHHHHHHSSC
T ss_pred HHHHHHhCCCCCcc---ccHHHHHHHHHHhCcc
Confidence 47789999999975 5789999876665554
No 20
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=54.78 E-value=10 Score=21.66 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=22.9
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||++++.+ .+.|++.++-....+.
T Consensus 16 l~dl~~~l~~~l~~~---~~dTlgG~v~~~lg~i 46 (84)
T d2rk5a1 16 LNDFNEYFETDLESD---NVDTIAGFYLTGVGTI 46 (84)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCcccc---cchhHHHHHHHHhCcC
Confidence 347889999999865 4679998876655443
No 21
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=54.07 E-value=10 Score=21.70 Aligned_cols=30 Identities=10% Similarity=0.123 Sum_probs=22.2
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~ 120 (124)
+..+++.||+++|.+ ++.|++.++-....+
T Consensus 19 l~dl~~~l~~~l~~~---~~~TigG~i~~~lg~ 48 (84)
T d2r2za1 19 IDEFNEVFETDLHMS---DVDTMAGYLITALGT 48 (84)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHSS
T ss_pred HHHHHHHHCcCCCCc---cchhHHHHHHHHhCc
Confidence 347889999999865 467998887655544
No 22
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=53.98 E-value=6.9 Score=22.17 Aligned_cols=33 Identities=9% Similarity=0.071 Sum_probs=24.4
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||+.+++++ .++.|++.++-....+.
T Consensus 11 i~dl~~~l~~~~~~~~-~~~~Ti~G~vl~~lg~i 43 (76)
T d2o3ga1 11 YVELAPQLNLPQQEED-ADFHTVAGLIMEELQTI 43 (76)
T ss_dssp HHHHTTTTTCCCCCTT-CSCSBHHHHHHHHHTSC
T ss_pred HHHHHHHHCcCCCccc-cccccHHHHHHHHhCcC
Confidence 3478889999998665 35789999876665554
No 23
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=48.43 E-value=12 Score=21.06 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=22.7
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||+++|.+ .+.|++.++-....+.
T Consensus 16 l~dl~~~l~~~l~~~---~~~Ti~G~v~~~lg~i 46 (78)
T d2o1ra1 16 LRDLNKMFNWELDTE---DARTFNGLILEHLEEI 46 (78)
T ss_dssp HHHHHHHHCCCCCCS---SCSBHHHHHHHHCSSC
T ss_pred HHHHHHHHCCCCCCc---cchHHHHHHHHHhCcC
Confidence 357889999999875 4679988876554443
No 24
>d1v31a_ a.42.1.1 (A:) Hypothetical protein AT5G14170 (rafl11-05-p19) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=46.71 E-value=2.4 Score=25.54 Aligned_cols=71 Identities=18% Similarity=0.225 Sum_probs=49.4
Q ss_pred cccchhhhhccccCCCCCCCHHHHHHHHHHHHhhc-CC--CCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhC
Q 033233 25 QRWSVLGSLRFMSSHDDHLTKEEVIDRVLSVVKCF-PK--VDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFK 96 (124)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~M~~~ei~~~l~~il~e~-l~--v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fg 96 (124)
++...++.+...-.. ..+++.++...|++.|.+. +. -+...|..|..|..-+|-|.+.+.++-..|...+-
T Consensus 10 ~~~~lS~~La~~lg~-~~~sR~~v~k~iw~YIk~n~Lqd~~nkr~I~~D~~L~~lfg~~~v~~~~l~~~L~~Hl~ 83 (93)
T d1v31a_ 10 EKFKLSTALMDVLGI-EVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLS 83 (93)
T ss_dssp CCEECCHHHHHHSCC-SEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCB
T ss_pred CCccCCHHHHHHHCc-CcCcHHHHHHHHHHHHHHhCCCCCCCCCEEecCHHHHHHhCCCcccHHHHHHHHHHhCC
Confidence 344444444444433 2468999999999999986 32 23456888888877788888888888887777654
No 25
>d1af7a1 a.58.1.1 (A:11-91) Chemotaxis receptor methyltransferase CheR, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=43.48 E-value=24 Score=19.66 Aligned_cols=47 Identities=11% Similarity=0.162 Sum_probs=36.2
Q ss_pred cccCCChhhHHHHHHHHHHHhCCccChhhc-------------ccCccHHHHHHHHHcCC
Q 033233 75 KDLGLDSLDNVEIVMALEEEFKLEIPDKEA-------------VRIDACNLAIEYIYNHP 121 (124)
Q Consensus 75 ~dLGlDSL~~veli~~lEe~fgI~I~~~~l-------------~~~~Tv~dlv~~I~~~~ 121 (124)
+.+.++.=++-.|...|.+++||.++...- .++.++.+.++++....
T Consensus 8 ~~~~lsd~~f~~~~~~i~~~~Gi~l~~~K~~~l~~RL~~rm~~~g~~s~~~Y~~~L~~~~ 67 (81)
T d1af7a1 8 QRLALSDAHFRRICQLIYQRAGIVLADHKRDMVYNRLVRRLRALGLDDFGRYLSMLEANQ 67 (81)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHCCCCCGGGHHHHHHHHHHHHHHHTCCCHHHHHHHHHHCT
T ss_pred hccCCCHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 466777788888899999999999977541 35788888888887543
No 26
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=41.07 E-value=26 Score=19.79 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=25.0
Q ss_pred HHHHHHHhCCccChhh-cccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKE-AVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~-l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||++++.++ -..+.|++.++-....+.
T Consensus 17 l~dl~~~l~~~~~~~~e~~~~~Tl~G~i~~~lg~i 51 (84)
T d2plsa1 17 VPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRL 51 (84)
T ss_dssp HHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSC
T ss_pred HHHHHHHHCCCCCcccccccccCHHHHHHHHhCcc
Confidence 4578899999987654 456899999876665544
No 27
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=39.39 E-value=26 Score=19.82 Aligned_cols=33 Identities=6% Similarity=0.077 Sum_probs=23.8
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||++++.+. ..+.|++.++-....+.
T Consensus 21 l~dl~~~l~~~l~~e~-~~~~TlgG~i~~~lg~i 53 (85)
T d2p13a1 21 IRKASNLLEHDLVDEA-ERYSTLGGYLLWQFGYI 53 (85)
T ss_dssp HHHHHHHHTSCCCCTT-CCCCBHHHHHHHHHSSC
T ss_pred HHHHHHHHCCCCCCcc-ccceEHHHHHHHHhCcC
Confidence 3478889999987643 46889998876555443
No 28
>d3deda1 d.145.1.4 (A:341-427) Probable hemolysin CV0231 {Chromobacterium violaceum [TaxId: 536]}
Probab=39.14 E-value=30 Score=19.61 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=24.3
Q ss_pred HHHHHHhCCccCh--hhcccCccHHHHHHHHHcCC
Q 033233 89 MALEEEFKLEIPD--KEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 89 ~~lEe~fgI~I~~--~~l~~~~Tv~dlv~~I~~~~ 121 (124)
..+++.||+++|. ++-..+.|++.++-....+.
T Consensus 20 ~dl~~~~~~~l~~~~~~~~~~~TlgG~il~~lg~i 54 (87)
T d3deda1 20 DRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRV 54 (87)
T ss_dssp HHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSS
T ss_pred HHHHHHhCCCCCCCccccccccCHHHHHHHHhCcC
Confidence 4678999999864 34567899999886665554
No 29
>d1q1va_ a.159.4.1 (A:) DEK C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.37 E-value=31 Score=19.27 Aligned_cols=42 Identities=14% Similarity=0.355 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHh-CCccChhh
Q 033233 44 TKEEVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEF-KLEIPDKE 103 (124)
Q Consensus 44 ~~~ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~f-gI~I~~~~ 103 (124)
+.++|...|++++... +++++..=++...||+.| |+++.+..
T Consensus 13 td~ei~~~i~~IL~~a------------------DL~tvT~K~IR~~LE~~~~g~dL~~rK 55 (70)
T d1q1va_ 13 TDEELKETIKKLLASA------------------NLEEVTMKQICKKVYENYPTYDLTERK 55 (70)
T ss_dssp CHHHHHHHHHHHHTTS------------------CGGGCCHHHHHHHHHHHCSSSCCSHHH
T ss_pred CHHHHHHHHHHHHHhC------------------CHHHhhHHHHHHHHHHHcCCCCcHHHH
Confidence 7789988888887642 245667778999999999 89987654
No 30
>d1h99a1 a.142.1.1 (A:54-168) Transcriptional antiterminator LicT {Bacillus subtilis [TaxId: 1423]}
Probab=34.87 E-value=11 Score=22.31 Aligned_cols=22 Identities=18% Similarity=0.362 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHhCCccChhhc
Q 033233 83 DNVEIVMALEEEFKLEIPDKEA 104 (124)
Q Consensus 83 ~~veli~~lEe~fgI~I~~~~l 104 (124)
.+-.+...+++.||+.+|+++.
T Consensus 79 ~a~~~~~~ie~~~~i~i~e~Ei 100 (115)
T d1h99a1 79 IGKEALVMVKNKTGVSLPEDEA 100 (115)
T ss_dssp HHHHHHHHHHHHHSCCCCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHH
Confidence 4556778899999999999985
No 31
>d1h99a2 a.142.1.1 (A:169-275) Transcriptional antiterminator LicT {Bacillus subtilis [TaxId: 1423]}
Probab=32.69 E-value=13 Score=21.78 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhCCccChhhc
Q 033233 84 NVEIVMALEEEFKLEIPDKEA 104 (124)
Q Consensus 84 ~veli~~lEe~fgI~I~~~~l 104 (124)
+..+...+++.||+.+++++.
T Consensus 75 a~~i~~~i~~~~~~~i~~~Ei 95 (107)
T d1h99a2 75 TKKIQTYIEREYEHKLTSDEL 95 (107)
T ss_dssp HHHHHHHHHHHHCCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 346778889999999999985
No 32
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=32.21 E-value=34 Score=20.09 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=21.0
Q ss_pred HHHHHHhCCccChhhcccCccHHHHHHHHHcC
Q 033233 89 MALEEEFKLEIPDKEAVRIDACNLAIEYIYNH 120 (124)
Q Consensus 89 ~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~ 120 (124)
..+++.||+++|.+ .+.|++.++-....+
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~~~~~lg~ 48 (98)
T d2p3ha1 20 DEVERAIGYELPEG---DYETISGLLFDHANA 48 (98)
T ss_dssp HHHHHHHTSCCCCS---SCCBHHHHHHHHHCS
T ss_pred HHHHHHHCCCCCCC---CccCHHHHHHHHHCc
Confidence 46788899999865 467888887555444
No 33
>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918 {Listeria innocua [TaxId: 1642]}
Probab=28.00 E-value=15 Score=22.98 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhCCccChh
Q 033233 84 NVEIVMALEEEFKLEIPDK 102 (124)
Q Consensus 84 ~veli~~lEe~fgI~I~~~ 102 (124)
.-+.+..+|+++|+.+|.+
T Consensus 27 t~E~I~~~E~~LG~~lP~~ 45 (158)
T d2icga1 27 TPELIKIYQDALGNEFPET 45 (158)
T ss_dssp CHHHHHHHHHHHTCCCCHH
T ss_pred CHHHHHHHHHHHCCCCCHH
Confidence 3578889999999999986
No 34
>d2p4pa1 d.145.1.4 (A:1-82) Hypothetical protein HD1797 {Haemophilus ducreyi [TaxId: 730]}
Probab=27.21 E-value=49 Score=18.40 Aligned_cols=33 Identities=3% Similarity=0.090 Sum_probs=22.3
Q ss_pred HHHHHHHhCCccChhhcccCccHHHHHHHHHcCC
Q 033233 88 VMALEEEFKLEIPDKEAVRIDACNLAIEYIYNHP 121 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~l~~~~Tv~dlv~~I~~~~ 121 (124)
+..+++.||+++..++ ..+.|++.++-....+.
T Consensus 16 l~d~~~~~~~~~~~~~-~~~~TlgG~i~~~lg~i 48 (82)
T d2p4pa1 16 LEDVMRALNIHTFPRD-ENYETIGGFMMYMLRKI 48 (82)
T ss_dssp HHHHHHHTTCCCSCCS-CSSCBHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCcc-cCccCHHHHHHHHhCcC
Confidence 3477889999864332 36789988876655543
No 35
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=27.06 E-value=19 Score=21.34 Aligned_cols=22 Identities=18% Similarity=0.114 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHhCCccChhhc
Q 033233 83 DNVEIVMALEEEFKLEIPDKEA 104 (124)
Q Consensus 83 ~~veli~~lEe~fgI~I~~~~l 104 (124)
.+.|.+..|.++|||.+|..+.
T Consensus 80 sf~eAv~~La~~~gi~l~~~e~ 101 (102)
T d1d0qa_ 80 PFVEAAKRLAAKAGVDLSVYEL 101 (102)
T ss_dssp CHHHHHHHHHHHHTCCCGGGCC
T ss_pred CHHHHHHHHHHHhCCCCCCcCC
Confidence 3456677788889998887654
No 36
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]}
Probab=26.62 E-value=33 Score=20.09 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhCCc---cChh
Q 033233 47 EVIDRVLSVVKCFPKVDPSQVTPDVHFQKDLGLDSLDNVEIVMALEEEFKLE---IPDK 102 (124)
Q Consensus 47 ei~~~l~~il~e~l~v~~~~I~~dt~l~~dLGlDSL~~veli~~lEe~fgI~---I~~~ 102 (124)
++...+.+++.+.+ ...|+|.-...+++..|.+.||=+ ||..
T Consensus 4 e~L~dl~~~~~~~l--------------~~~~~~~~~a~~l~~~l~~~~gG~~lYiP~~ 48 (94)
T d1rr7a_ 4 ALLAELNDLLRGEL--------------SRLGVDPAHSLEIVVAICKHLGGGQVYIPRG 48 (94)
T ss_dssp HHHHHHHHHHHHHH--------------HHTSSCTTSHHHHHHHHHHHHCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHH--------------HHhCccHHHHHHHHHHHHHHHCCeeEeeecc
Confidence 45555555555544 356777777889999999999854 5553
No 37
>d1sr9a1 a.5.7.1 (A:437-491) 2-isopropylmalate synthase LeuA, communication domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.58 E-value=20 Score=19.22 Aligned_cols=16 Identities=13% Similarity=0.391 Sum_probs=12.9
Q ss_pred HHHHHHHhCCccChhh
Q 033233 88 VMALEEEFKLEIPDKE 103 (124)
Q Consensus 88 i~~lEe~fgI~I~~~~ 103 (124)
..-||.+||+.+|..-
T Consensus 2 AyiLe~~~Gi~LPr~m 17 (55)
T d1sr9a1 2 AYIMKTDHGLSLPRRL 17 (55)
T ss_dssp HHHHHHHHCCCCCHHH
T ss_pred eEEeecccCCCCCHHH
Confidence 3468999999999864
No 38
>d2prva1 d.369.1.1 (A:1-152) Uncharacterized protein YobK {Bacillus subtilis [TaxId: 1423]}
Probab=23.79 E-value=20 Score=22.09 Aligned_cols=19 Identities=21% Similarity=0.412 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhCCccChhh
Q 033233 85 VEIVMALEEEFKLEIPDKE 103 (124)
Q Consensus 85 veli~~lEe~fgI~I~~~~ 103 (124)
-+-+..+|+++|+.+|.+-
T Consensus 25 ~e~I~~~E~~Lg~~LP~~Y 43 (152)
T d2prva1 25 HENIGRIEENLQCDLPNSY 43 (152)
T ss_dssp HHHHHHHHHHHTSCCCHHH
T ss_pred HHHHHHHHHHhCCCCCHHH
Confidence 4567889999999999863
No 39
>d2c5ra1 a.251.1.1 (A:66-129) Early protein gp16.7 {Bacteriophage phi-29 [TaxId: 10756]}
Probab=23.65 E-value=46 Score=18.06 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=25.0
Q ss_pred HHHHHHhCCccChhhc-----ccCccHHHHHHHHHcC
Q 033233 89 MALEEEFKLEIPDKEA-----VRIDACNLAIEYIYNH 120 (124)
Q Consensus 89 ~~lEe~fgI~I~~~~l-----~~~~Tv~dlv~~I~~~ 120 (124)
..+=++-||.||.+-+ .++.|-+++.+||+.+
T Consensus 10 LDlYe~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnq 46 (64)
T d2c5ra1 10 LDLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQ 46 (64)
T ss_dssp HHHHHHTTCCCCHHHHHHHHTTCCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCcCcHHHHHHHHHhhhhhHHHHHHHHHhh
Confidence 4556778999998753 5689999999999754
No 40
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=22.47 E-value=57 Score=19.78 Aligned_cols=26 Identities=23% Similarity=0.119 Sum_probs=20.3
Q ss_pred ccCCChhhHHHHHHHHHHHhCCccCh
Q 033233 76 DLGLDSLDNVEIVMALEEEFKLEIPD 101 (124)
Q Consensus 76 dLGlDSL~~veli~~lEe~fgI~I~~ 101 (124)
..|-||+.++.|+....+..+..++.
T Consensus 34 SGGKDS~vlL~L~~~~~~~~~~~~~~ 59 (211)
T d1zuna1 34 SIGKDSAVMLHLARKAFFPGKLPFPV 59 (211)
T ss_dssp CSSHHHHHHHHHHHHHHTTSCCSSCE
T ss_pred CCcHHHHHHHHHHHhhcccccCCeeE
Confidence 68999999999998887766655543
Done!