BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033234
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana
GN=UEV1A PE=1 SV=1
Length = 158
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/124 (75%), Positives = 109/124 (87%), Gaps = 1/124 (0%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
MDDADDI MQSWTGTI+GPPNT +EG+I+QLKLFCG +YP++PP+VRFQTRINM CVN E
Sbjct: 36 MDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPE 95
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNEDARMDHKGLVLK 120
TG+VEPSLFPML NW+REYTMEDIL +LKKEMM+ N KLAQPPEGNE+AR D KG K
Sbjct: 96 TGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNRKLAQPPEGNEEARADPKGPA-K 154
Query: 121 CCIL 124
CC++
Sbjct: 155 CCVM 158
>sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana
GN=UEV1B PE=1 SV=1
Length = 159
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 110/124 (88%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
MDDADDILMQSWTGTI+GP NT +EG+I+QLKLFCG DYP++PP+VRFQ+RINM CVN E
Sbjct: 36 MDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPE 95
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNEDARMDHKGLVLK 120
G+V+PS FPML+NW+RE+TMED+L QLKKEMMS QN KLAQP EGNE+ R D KGLV+K
Sbjct: 96 NGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVK 155
Query: 121 CCIL 124
CC++
Sbjct: 156 CCVM 159
>sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana
GN=UEV1D PE=1 SV=1
Length = 146
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 79/106 (74%), Positives = 88/106 (83%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
MDD DDI M+SWTGTIIGP NTVHEGRIYQLKLFC DYP+ PP+VRF +R+NM CVN E
Sbjct: 38 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHE 97
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
TG+V+P F +LANWQREYTMEDIL QLKKEM + N KL QPPEG
Sbjct: 98 TGVVDPKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 143
>sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana
GN=UEV1C PE=1 SV=1
Length = 145
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 79/106 (74%), Positives = 89/106 (83%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
MDD DDI M+SWTGTIIGP NTVHEGRIYQLKLFC DYP+ PP+VRF +RINMTCVN +
Sbjct: 37 MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHD 96
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
TG+V+ F +LANWQR+YTMEDILTQLKKEM + N KL QPPEG
Sbjct: 97 TGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAASHNRKLVQPPEG 142
>sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium
discoideum GN=ube2v PE=3 SV=1
Length = 138
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 78/106 (73%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++ DDIL+ SW GTIIGP NT + R Y LKL+C DYP+ PP+VRF T+IN+ CVNQ+
Sbjct: 30 LESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQ 89
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G+V+P P+L+NW + +++IL++L++EM S N KL QPPEG
Sbjct: 90 NGVVDPKNLPILSNWTSKNRIQNILSELRREMSSSSNKKLVQPPEG 135
>sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2
PE=2 SV=4
Length = 145
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 76/106 (71%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY LK+ CG+ YP+ PPSVRF T+INM +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
+GMV+ P+LA WQ Y+++ IL +L++ MMS +N KL QPPEG
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVILQELRRLMMSKENMKLPQPPEG 140
>sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus
GN=Ube2v2 PE=1 SV=3
Length = 145
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 76/106 (71%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY LK+ CG+ YP+ PPSVRF T+INM +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
+GMV+ P+LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1
Length = 139
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
+ +ADDI + W TI+GP ++VHE RIY LK+ C +YPD PP V F +RIN+ V+ E
Sbjct: 30 LTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGE 89
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGN 107
TG V P L +W+REY+ME +L LKKEM S N KL QPPEG+
Sbjct: 90 TGKVNPHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPPEGS 136
>sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2
PE=2 SV=1
Length = 145
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY LK+ CG YP+ PPSVRF T+INM +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
+GMV+ P+LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2
PE=1 SV=4
Length = 145
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY LK+ CG YP+ PPSVRF T+INM +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
+GMV+ P+LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2
PE=2 SV=3
Length = 145
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY LK+ CG YP+ PPSVRF T+INM +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
+GMV+ P+LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 SGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1
PE=1 SV=1
Length = 147
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 76/106 (71%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T++E RIY LK+ CG YP+ PPSVRF TR+NM+ V+
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSS 96
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G+V+P +LA WQ ++++ IL +L++ MMS +N KL QPPEG
Sbjct: 97 NGVVDPRATAVLAKWQNSHSIKVILQELRRLMMSKENMKLPQPPEG 142
>sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1
PE=1 SV=2
Length = 147
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 74/106 (69%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T++E RIY LK+ CG YP+ PP VRF T+INM VN
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 96
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G+V+P +LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 97 NGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
>sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 74/106 (69%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T++E RIY LK+ CG YP+ PP VRF T+INM VN
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 96
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G+V+P +LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 97 NGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
>sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus
GN=UBE2V2 PE=2 SV=1
Length = 144
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 74/106 (69%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY LK+ CG YP+ PP+VRF T+INM +N
Sbjct: 34 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPTVRFVTKINMNGINNS 93
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
GMV+ P+LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 94 NGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 139
>sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1
SV=1
Length = 137
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
+ D+DDI M W GTI+GPP++ HE RIY L + CG +YPD+PP V F ++IN+ CVN
Sbjct: 30 LADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPT 89
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
TG V+ + F L +W+R YTME +L L+KEM +P N KL QP EG
Sbjct: 90 TGEVQ-TDFHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEG 134
>sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus
GN=UBE2V1 PE=2 SV=2
Length = 145
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 74/106 (69%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T++E RIY LK+ CG YP+ PP VRF T+INM VN
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G+V+P +LA WQ ++++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 NGVVDPRAISVLAKWQNSFSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 73/106 (68%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T++E RIY LK+ CG P+ PP VRF T+INM VN
Sbjct: 37 LEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKCPEAPPFVRFVTKINMNGVNSS 96
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G+V+P +LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 97 NGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
>sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2
PE=2 SV=1
Length = 145
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 73/106 (68%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGP T +E RIY LK+ CG YP+ PP+VRF T+I+M +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPARTNYENRIYSLKVECGPKYPEVPPTVRFVTKISMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
GMV+ P+LA WQ Y+++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 NGMVDARSIPILAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140
>sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis
GN=ube2v2 PE=2 SV=1
Length = 145
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%)
Query: 1 MDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQE 60
++D +D+ + WTG IIGPP T +E RIY L+L CG YP+ PP+VRF T++NM +N
Sbjct: 35 LEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNS 94
Query: 61 TGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 106
G V+ P+LA WQ ++++ +L +L++ MMS +N KL QPPEG
Sbjct: 95 NGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEG 140
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + +DYP PP V F+TRI +N + G++ L +
Sbjct: 93 WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 149
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 150 KDNWSPALTISKVLLSI 166
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + +DYP PP V F+TRI +N + G++ L +
Sbjct: 93 WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 149
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 150 KDNWSPALTISKVLLSI 166
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + +DYP PP V F+TRI +N + G++ L +
Sbjct: 93 WRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 149
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 150 KDNWSPALTISKVLLSI 166
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana
GN=COP10 PE=1 SV=1
Length = 182
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
+ W TIIGP T +EG I+ L + +DYP PP + F+TRI V+ + S+
Sbjct: 65 LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDL---SV 121
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQP 103
+ +W T+ +L ++ + P+ + A P
Sbjct: 122 NILRDSWSPALTITKVLQAIRSIFLKPEPYSPALP 156
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + DYP PP V F+TRI +N + G++ L +
Sbjct: 87 WRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 143
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 144 KDNWSPALTISKVLLSI 160
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + DYP PP V F+TRI +N + G++ L +
Sbjct: 87 WRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 143
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 144 KDNWSPALTISKVLLSI 160
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
+ W TI+GPP +V+EG ++ L + +YP PP V F+TRI +N + G++ L
Sbjct: 115 LYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQ-GVI--CL 171
Query: 69 FPMLANWQREYTMEDILTQL 88
+ NW T+ +L +
Sbjct: 172 DILKDNWSPALTISKVLLSI 191
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 5 DDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV 64
DD + WT I GP T +EG ++QL YP PP VRF T+I V+ +TG +
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
Query: 65 EPSLFPMLAN-WQREYTMEDILTQLKKEMMSPQ 96
+L N W +T++ + + M P+
Sbjct: 90 ---CLDILKNAWSPAWTLQSVCRAIIALMAHPE 119
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + +YP PP V F+TRI +N + G++ L +
Sbjct: 79 WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 135
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 136 KDNWSPALTISKVLLSI 152
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W TI+GPP +V+EG ++ L + +YP PP V F+TRI +N + G++ L +
Sbjct: 79 WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ-GVI--CLDIL 135
Query: 72 LANWQREYTMEDILTQL 88
NW T+ +L +
Sbjct: 136 KDNWSPALTISKVLLSI 152
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGM 63
DD+ W TI+GPP++ ++G ++ L + TDYP PP V F TRI +N +
Sbjct: 27 GDDLF--HWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPSLFPMLANWQREYTMEDILTQLKKEMMSP 95
L + + W T+ +L + + P
Sbjct: 85 C---LDILRSQWSPALTISKVLLSICSLLCDP 113
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGM 63
DD+ W TI+GPP + ++G ++ L + TDYP PP V F TRI +N +
Sbjct: 27 GDDLF--HWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Query: 64 VEPSLFPMLANWQREYTMEDILTQLKKEMMSP 95
L + + W T+ +L + + P
Sbjct: 85 C---LDILRSQWSPALTISKVLLSICSLLCDP 113
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETG 62
D D++ W T+ GP +TV+E Y+L L +DYP PP V+F T V+Q
Sbjct: 55 DGDNLF--KWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGN 112
Query: 63 MVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQN 97
+ L + NW Y + IL L+ + P N
Sbjct: 113 IC---LDILKENWTASYDVRTILLSLQSLLGEPNN 144
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGM 63
DD+ W TI+GPP++ ++G ++ L + TDYP PP + F T+I +N +
Sbjct: 27 GDDLF--HWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSI 84
Query: 64 VEPSLFPMLANWQREYTMEDILTQLKKEMMSP 95
L + + W T+ +L + + P
Sbjct: 85 C---LDILRSQWSPALTVSKVLLSICSLLCDP 113
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGM 63
DD+ W TI+GPP++ ++G ++ L + TDYP PP + F T+I +N +
Sbjct: 27 GDDLF--HWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSI 84
Query: 64 VEPSLFPMLANWQREYTMEDILTQLKKEMMSP 95
L + + W T+ +L + + P
Sbjct: 85 C---LDILRSQWSPALTVSKVLLSICSLLCDP 113
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGM 63
DD+ W TI+GPP++ ++G ++ L + TDYP PP + F T+I +N +
Sbjct: 27 GDDLF--HWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSI 84
Query: 64 VEPSLFPMLANWQREYTMEDILTQLKKEMMSP 95
L + + W T+ +L + + P
Sbjct: 85 C---LDILRSQWSPALTVSKVLLSICSLLCDP 113
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGM 63
DD+ W TI+GPP++ ++G ++ L + TDYP PP + F T+I +N +
Sbjct: 27 GDDLF--HWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSI 84
Query: 64 VEPSLFPMLANWQREYTMEDILTQLKKEMMSP 95
L + + W T+ +L + + P
Sbjct: 85 C---LDILRSQWSPALTVSKVLLSICSLLCDP 113
>sp|P52486|UBCD4_DROME Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster
GN=UbcD4 PE=1 SV=2
Length = 199
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 6 DILMQSWT---GTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETG 62
+++ SWT G I GPP+T +EG + L++ YP NPP VRF TRI ++ TG
Sbjct: 30 ELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTG 89
Query: 63 MVEPSLFPMLANWQREYTMEDI 84
+ L + NW T+ +
Sbjct: 90 AI--CLDILKDNWAAAMTLRTV 109
>sp|P61087|UBE2K_MOUSE Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1
SV=3
Length = 200
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 14 GTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV 64
G I GPP+T +EG YQL++ YP NPP VRF T+I ++ TG +
Sbjct: 41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
>sp|P61086|UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1
SV=3
Length = 200
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 14 GTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV 64
G I GPP+T +EG YQL++ YP NPP VRF T+I ++ TG +
Sbjct: 41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
>sp|P61085|UBE2K_BOVIN Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1
SV=3
Length = 200
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 14 GTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV 64
G I GPP+T +EG YQL++ YP NPP VRF T+I ++ TG +
Sbjct: 41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
>sp|Q86IZ3|UBCX_DICDI Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum
GN=pex4 PE=3 SV=1
Length = 149
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 5 DDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV 64
D+ + W I GPP+T +E ++L + T+YP PP+++F T+I ++ +TG
Sbjct: 26 DESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTG-- 83
Query: 65 EPSLFPMLANWQREYTMEDILTQLKKEMMSPQ 96
E L + +W YT++ + + + P+
Sbjct: 84 EICLDLLKTSWSAIYTLQSVCRSIIALLSLPE 115
>sp|Q94490|UBCB_DICDI Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum
GN=ubcB PE=1 SV=1
Length = 148
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
+Q W T+ GP + E ++ + + DYP PP+++F T+I + G + +
Sbjct: 31 LQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEV 90
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSP 95
F + W + + D+LT ++ + P
Sbjct: 91 F---STWSPQLKILDVLTTIRSILTDP 114
>sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7
PE=2 SV=1
Length = 166
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV------- 64
W+ TIIGPP+T++EG + + +YP++PP+VRF + + V + +
Sbjct: 37 WSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPP 96
Query: 65 --EPSLFPMLA-NWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNE--DARMDHKGLVL 119
+PS + + + W +T+E I+ + + P + A E D R + K V
Sbjct: 97 GDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVS 156
Query: 120 KC 121
+C
Sbjct: 157 RC 158
>sp|Q8L7T3|UBC20_ARATH Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20
PE=2 SV=1
Length = 180
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 12 WTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM 71
W GTI G +TV EG Y+L L DYP PP V+F+T C + + +
Sbjct: 67 WKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFET----CCFHPNVDVYGNICLDI 122
Query: 72 LAN-WQREYTMEDILTQLKK-----EMMSPQNWKLAQPPEGNEDAR 111
L + W Y + IL ++ + SP N + AQ E+ R
Sbjct: 123 LQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYR 168
>sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
M W TI+GP ++ ++G ++ L + TDYP PP V F TRI +N + L
Sbjct: 30 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSIC---L 86
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSPQ 96
+ + W T+ +L + + P
Sbjct: 87 DILRSQWSPALTISKVLLSICSLLCDPN 114
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
M W TI+GP ++ ++G ++ L + TDYP PP V F TRI +N + L
Sbjct: 30 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---L 86
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSP 95
+ + W T+ +L + + P
Sbjct: 87 DILRSQWSPALTISKVLLSICSLLCDP 113
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
M W TI+GP ++ ++G ++ L + TDYP PP V F TRI +N + L
Sbjct: 30 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---L 86
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSPQ 96
+ + W T+ +L + + P
Sbjct: 87 DILRSQWSPALTISKVLLSICSLLCDPN 114
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
M W TI+GP ++ ++G ++ L + TDYP PP V F TRI +N + L
Sbjct: 30 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---L 86
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSPQ 96
+ + W T+ +L + + P
Sbjct: 87 DILRSQWSPALTISKVLLSICSLLCDPN 114
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSL 68
M W TI+GP ++ ++G ++ L + TDYP PP V F TRI +N + L
Sbjct: 30 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---L 86
Query: 69 FPMLANWQREYTMEDILTQLKKEMMSPQ 96
+ + W T+ +L + + P
Sbjct: 87 DILRSQWSPALTISKVLLSICSLLCDPN 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,451,814
Number of Sequences: 539616
Number of extensions: 2068410
Number of successful extensions: 3750
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3489
Number of HSP's gapped (non-prelim): 274
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)