Query 033234
Match_columns 124
No_of_seqs 117 out of 1140
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 18:58:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033234.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033234hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2awf_A Ubiquitin-conjugating e 100.0 4.9E-38 1.7E-42 225.9 10.8 105 3-110 43-158 (172)
2 1jat_B Ubiquitin-conjugating e 100.0 5E-38 1.7E-42 218.6 7.8 99 6-109 38-138 (138)
3 2r0j_A Ubiquitin carrier prote 100.0 8.7E-38 3E-42 219.8 8.9 103 3-110 26-128 (149)
4 1fxt_A Ubiquitin-conjugating e 100.0 5.4E-38 1.8E-42 220.8 7.5 104 3-110 27-130 (149)
5 2ayv_A Ubiquitin-conjugating e 100.0 1.6E-37 5.5E-42 222.1 9.4 102 3-109 46-147 (166)
6 2c2v_B Ubiquitin-conjugating e 100.0 1.2E-37 4E-42 220.2 8.4 102 3-109 30-131 (154)
7 2ucz_A UBC7, ubiquitin conjuga 100.0 1.3E-37 4.3E-42 222.1 8.6 105 3-110 30-145 (165)
8 3h8k_A Ubiquitin-conjugating e 100.0 1.9E-37 6.6E-42 220.9 9.4 105 3-110 29-144 (164)
9 2e2c_A Ubiquitin conjugating e 100.0 2.5E-37 8.5E-42 218.9 9.7 102 3-109 34-135 (156)
10 2bep_A Ubiquitin-conjugating e 100.0 2.3E-37 7.9E-42 219.7 9.5 104 3-110 36-139 (159)
11 4gpr_A Ubiquitin-conjugating e 100.0 2.5E-37 8.7E-42 217.9 9.3 102 3-109 29-130 (151)
12 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.6E-37 8.9E-42 221.6 8.7 102 3-109 29-130 (169)
13 3rz3_A Ubiquitin-conjugating e 100.0 3.3E-37 1.1E-41 223.4 9.3 107 2-111 32-149 (183)
14 1jat_A Ubiquitin-conjugating e 100.0 3.6E-37 1.2E-41 217.9 9.2 103 3-110 30-132 (155)
15 2c4o_A Ubiquitin-conjugating e 100.0 4.2E-37 1.4E-41 219.7 9.3 102 3-109 44-145 (165)
16 2gjd_A Ubiquitin-conjugating e 100.0 3.3E-37 1.1E-41 218.6 8.6 103 5-110 36-138 (157)
17 3rcz_B SUMO-conjugating enzyme 100.0 3.8E-37 1.3E-41 219.6 8.9 101 6-109 43-143 (163)
18 1z2u_A Ubiquitin-conjugating e 100.0 2.8E-37 9.7E-42 217.3 8.2 102 3-109 29-130 (150)
19 2q0v_A Ubiquitin-conjugating e 100.0 8.5E-37 2.9E-41 216.4 10.4 99 6-110 53-154 (156)
20 2a4d_A Ubiquitin-conjugating e 100.0 1.4E-36 4.6E-41 216.2 11.4 104 3-106 52-156 (160)
21 1yh2_A HSPC150 protein similar 100.0 5E-37 1.7E-41 220.0 9.3 104 3-109 29-134 (169)
22 2aak_A UBC1, ubiquitin conjuga 100.0 3.1E-37 1.1E-41 217.5 8.0 102 3-109 29-130 (152)
23 2y9m_A Ubiquitin-conjugating e 100.0 5.1E-37 1.8E-41 220.5 9.3 106 3-111 43-149 (172)
24 1i7k_A Ubiquitin-conjugating e 100.0 3.7E-37 1.3E-41 222.5 8.0 102 3-109 55-156 (179)
25 3k9o_A Ubiquitin-conjugating e 100.0 6E-37 2.1E-41 224.8 9.1 103 3-109 33-135 (201)
26 1zdn_A Ubiquitin-conjugating e 100.0 2.7E-37 9.2E-42 219.2 7.0 103 3-110 38-140 (158)
27 1y8x_A Ubiquitin-conjugating e 100.0 6.4E-37 2.2E-41 217.8 8.8 103 2-110 29-131 (160)
28 1yrv_A Ubiquitin-conjugating l 100.0 2.7E-37 9.2E-42 221.5 6.8 105 3-109 48-152 (169)
29 2f4z_A Tgtwinscan_2721 - E2 do 100.0 6.2E-37 2.1E-41 223.7 8.3 103 4-110 71-173 (193)
30 2grr_A Ubiquitin-conjugating e 100.0 7.9E-37 2.7E-41 217.4 8.6 103 4-109 38-140 (161)
31 2pwq_A Ubiquitin conjugating e 100.0 3.9E-37 1.3E-41 228.1 6.2 103 3-109 48-150 (216)
32 2nvu_C NEDD8-conjugating enzym 100.0 1.3E-36 4.4E-41 219.9 8.0 102 2-109 49-150 (180)
33 3bzh_A Ubiquitin-conjugating e 100.0 3.3E-36 1.1E-40 220.0 9.4 102 3-109 73-174 (194)
34 2hlw_A Ubiquitin-conjugating e 100.0 3.7E-36 1.2E-40 215.8 9.1 104 3-106 62-166 (170)
35 2onu_A Ubiquitin-conjugating e 100.0 4.7E-37 1.6E-41 216.8 4.2 103 3-109 24-127 (152)
36 1tte_A Ubiquitin-conjugating e 100.0 5.4E-37 1.9E-41 227.2 4.6 103 3-109 28-130 (215)
37 2fo3_A Ubiquitin-conjugating e 100.0 1.3E-35 4.5E-40 203.3 10.4 93 3-100 31-124 (125)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 7E-36 2.4E-40 211.0 9.1 103 3-110 28-130 (154)
39 1wzv_A Ubiquitin-conjugating e 100.0 4.3E-36 1.5E-40 212.3 7.6 102 3-109 30-131 (155)
40 3e46_A Ubiquitin-conjugating e 100.0 6.8E-36 2.3E-40 225.9 9.1 103 3-109 85-187 (253)
41 1yf9_A Ubiquitin carrier prote 100.0 2.5E-36 8.4E-41 216.9 5.0 103 3-109 33-136 (171)
42 3fn1_B NEDD8-conjugating enzym 100.0 1.9E-35 6.5E-40 211.2 8.3 104 2-109 39-147 (167)
43 2z5d_A Ubiquitin-conjugating e 100.0 3.6E-36 1.2E-40 217.4 3.7 101 5-109 48-149 (179)
44 2h2y_A Ubiquitin-conjugating e 100.0 1.3E-34 4.5E-39 201.0 10.8 90 3-97 45-135 (136)
45 3o2u_A NEDD8-conjugating enzym 100.0 4.9E-35 1.7E-39 213.2 8.7 104 2-109 55-159 (190)
46 2a7l_A Hypothetical ubiquitin- 100.0 1.1E-33 3.7E-38 196.5 10.6 87 2-93 48-136 (136)
47 4ddg_A Ubiquitin-conjugating e 100.0 8.9E-34 3E-38 226.0 7.7 102 3-109 28-129 (399)
48 4ds2_A Ubiquitin-conjugating e 100.0 1.6E-33 5.5E-38 201.4 5.9 102 3-109 45-151 (167)
49 3ceg_A Baculoviral IAP repeat- 100.0 3.3E-31 1.1E-35 205.7 9.3 100 3-105 105-217 (323)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.9E-30 6.5E-35 188.5 8.9 91 3-98 39-130 (187)
51 1zuo_A Hypothetical protein LO 100.0 3.6E-31 1.2E-35 192.2 4.2 95 3-101 55-162 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.9E-24 1.3E-28 151.7 1.8 79 4-86 52-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 1.6E-19 5.6E-24 128.2 6.3 85 11-99 62-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 7E-17 2.4E-21 112.6 1.6 63 11-79 59-132 (168)
55 3obq_A Tumor susceptibility ge 99.5 1.6E-14 5.4E-19 100.9 5.3 76 10-94 54-138 (146)
56 2ebm_A RWD domain-containing p 94.4 0.056 1.9E-06 35.6 4.5 40 11-50 39-78 (128)
57 2yz0_A Serine/threonine-protei 93.4 0.17 5.9E-06 33.6 5.5 39 11-50 47-85 (138)
58 2ebk_A RWD domain-containing p 93.1 0.27 9.2E-06 32.3 6.0 38 11-49 41-78 (128)
59 2day_A Ring finger protein 25; 92.5 0.32 1.1E-05 31.8 5.8 25 27-51 59-83 (128)
60 3zqs_A E3 ubiquitin-protein li 92.1 0.52 1.8E-05 33.6 6.7 61 10-92 26-86 (186)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 89.8 0.23 8E-06 32.8 3.0 39 11-50 46-86 (137)
62 2dax_A Protein C21ORF6; RWD do 87.7 0.45 1.6E-05 32.2 3.3 24 27-50 73-96 (152)
63 2daw_A RWD domain containing p 84.8 0.71 2.4E-05 31.4 3.1 23 28-50 76-98 (154)
64 2bum_A Protocatechuate 3,4-dio 39.9 23 0.00079 25.3 3.1 26 25-50 109-139 (209)
65 3qrl_A Transcription initiatio 37.5 69 0.0024 21.5 5.0 42 5-48 28-72 (140)
66 2jrw_A Cyclic extended PEP.1; 32.0 21 0.00073 16.6 1.2 17 40-56 4-20 (26)
67 3rls_A YAF9, protein AF-9 homo 26.3 1.4E+02 0.0047 20.7 5.1 33 9-41 32-64 (175)
68 2bum_B Protocatechuate 3,4-dio 22.4 34 0.0011 25.0 1.4 26 25-50 134-166 (241)
69 3t63_A 3,4-PCD, protocatechuat 21.2 49 0.0017 23.4 2.1 24 27-50 102-130 (200)
70 1tmx_A Hydroxyquinol 1,2-dioxy 20.3 40 0.0014 25.4 1.5 26 25-50 183-226 (293)
71 2xsu_A Catechol 1,2 dioxygenas 20.2 40 0.0014 25.6 1.5 26 25-50 187-230 (312)
72 2azq_A Catechol 1,2-dioxygenas 20.2 39 0.0013 25.6 1.5 31 25-57 183-231 (311)
No 1
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.9e-38 Score=225.86 Aligned_cols=105 Identities=30% Similarity=0.475 Sum_probs=85.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC-----------
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM----------- 71 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~----------- 71 (124)
+++|++ +|+++|.||++||||||+|+++|.||++||++||+|+|.|+||||||+. +|+||+++|..
T Consensus 43 ~~~nl~--~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~-~G~IClsiL~~~~~d~~~~~~~ 119 (172)
T 2awf_A 43 DDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK-NGDVCISILHEPGEDKYGYEKP 119 (172)
T ss_dssp STTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT-TCBBCCGGGSCC---------C
T ss_pred CCcccc--ccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC-CCcEehhhcCCccccccccccc
Confidence 557888 9999999999999999999999999999999999999999999999997 89999999951
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 72 LANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 72 ~~~W~p~~~l~~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
.+.|+|+++|++||++|+++|.+|++++++|.+|+..|.
T Consensus 120 ~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~ 158 (172)
T 2awf_A 120 EERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWR 158 (172)
T ss_dssp TTSCCTTCCHHHHHHHHHHHHSCC---------------
T ss_pred CCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHH
Confidence 268999999999999999999999999999999999984
No 2
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=5e-38 Score=218.60 Aligned_cols=99 Identities=49% Similarity=0.966 Sum_probs=94.1
Q ss_pred CCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCee--eccCCCCCCCCCCCCCHHH
Q 033234 6 DILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV--EPSLFPMLANWQREYTMED 83 (124)
Q Consensus 6 d~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~i--cl~~l~~~~~W~p~~~l~~ 83 (124)
|++ +|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+..+|+| |+++| ++|+|++++++
T Consensus 38 nl~--~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l---~~W~p~~~i~~ 112 (138)
T 1jat_B 38 TMT--KWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTL---RDWKRAYTMET 112 (138)
T ss_dssp TCC--EEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHH---HTCCTTCCHHH
T ss_pred cce--EEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccC---CCCCCcCcHHH
Confidence 356 999999999999999999999999999999999999999999999999866999 88887 48999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 84 ILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 84 il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
||.+|+++|.+|++++++|++|++.|
T Consensus 113 vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 113 LLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp HHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred HHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99999999999999999999999987
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=8.7e-38 Score=219.81 Aligned_cols=103 Identities=23% Similarity=0.410 Sum_probs=98.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++|. ++|+|++++.
T Consensus 26 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~ 100 (149)
T 2r0j_A 26 VPENYR--HFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK-LGRICLDILK--DKWSPALQIR 100 (149)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TCBBCCGGGT--TTCCTTSCHH
T ss_pred CCCccc--EEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC-CCEEechhcC--CCCCCCCcHH
Confidence 457777 9999999999999999999999999999999999999999999999997 8999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||.+|+++|.+|++++++|.+++..|.
T Consensus 101 ~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 128 (149)
T 2r0j_A 101 TVLLSIQALLSSPEPDDPLDSKVAEHFK 128 (149)
T ss_dssp HHHHHHHHHHHSCCTTSCSSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHH
Confidence 9999999999999999999999998883
No 4
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=5.4e-38 Score=220.82 Aligned_cols=104 Identities=23% Similarity=0.425 Sum_probs=98.8
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+..+|.||+++| .++|+|++++.
T Consensus 27 ~~~~l~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL--~~~W~p~~~i~ 102 (149)
T 1fxt_A 27 SESDIH--HLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDIL--KNAWSPVITLK 102 (149)
T ss_dssp SSSCSS--EEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHH--HTSCCTTCCHH
T ss_pred CCCCce--EEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcC--CCCCCCCCcHH
Confidence 344888 99999999999999999999999999999999999999999999999976999999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||.+|+++|.+|++++++|.+++..|.
T Consensus 103 ~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 130 (149)
T 1fxt_A 103 SALISLQALLQSPEPNDPQDAEVAQHYL 130 (149)
T ss_dssp HHHHHHHHHHHSCCSSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 9999999999999999999999999883
No 5
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-37 Score=222.08 Aligned_cols=102 Identities=25% Similarity=0.510 Sum_probs=98.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|. ++|+|+++|.
T Consensus 46 ~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~-~G~ICL~iL~--~~WsP~~ti~ 120 (166)
T 2ayv_A 46 VGDDMF--HWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS-QGAICLDILK--DQWSPALTIS 120 (166)
T ss_dssp CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-TCBBCCGGGT--TTCCTTCCHH
T ss_pred cCCCcc--eeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC-CCeEEccccc--ccCCCCCcHH
Confidence 467888 9999999999999999999999999999999999999999999999997 9999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 121 ~vL~sI~sll~~pn~~~Pln~~aa~l~ 147 (166)
T 2ayv_A 121 KVLLSISSLLTDPNPDDPLVPEIAHLY 147 (166)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchhhHHHHHHH
Confidence 999999999999999999999999888
No 6
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-37 Score=220.25 Aligned_cols=102 Identities=22% Similarity=0.408 Sum_probs=96.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
++||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++|. ++|+|++++.
T Consensus 30 ~~~~l~--~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~ 104 (154)
T 2c2v_B 30 DESNAR--YFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK-LGRICLDILK--DKWSPALQIR 104 (154)
T ss_dssp CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT-TCBBCCHHHH--TSCCTTCCHH
T ss_pred CCCchh--eEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCcc-CCeEEchhcc--CCCCCCCcHH
Confidence 456888 9999999999999999999999999999999999999999999999996 8999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 105 ~vl~~i~~ll~~pn~~~p~n~~aa~~~ 131 (154)
T 2c2v_B 105 TVLLSIQALLSAPNPDDPLANDVAEQW 131 (154)
T ss_dssp HHHHHHHHHTTSCCCCCC--CHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 999999999999999999999999988
No 7
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-37 Score=222.15 Aligned_cols=105 Identities=24% Similarity=0.335 Sum_probs=99.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC-----------
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM----------- 71 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~----------- 71 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++|..
T Consensus 30 ~~~~l~--~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~-~G~iCl~iL~~~~~~~~~~~~~ 106 (165)
T 2ucz_A 30 SENNIF--IWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP-NGEVCISILHSPGDDPNMYELA 106 (165)
T ss_dssp SSSCCS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT-TSBBCCGGGSCCCSCTTSTTTT
T ss_pred CCCCcc--EEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC-CCcEeehhhCCccccccccCCC
Confidence 457888 9999999999999999999999999999999999999999999999997 89999999931
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 72 LANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 72 ~~~W~p~~~l~~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
.+.|+|+++|.+||++|+++|.+|++++++|.+++..|.
T Consensus 107 ~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~ 145 (165)
T 2ucz_A 107 EERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWR 145 (165)
T ss_dssp TTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHH
Confidence 479999999999999999999999999999999999883
No 8
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.9e-37 Score=220.93 Aligned_cols=105 Identities=22% Similarity=0.378 Sum_probs=98.8
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC-----------
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM----------- 71 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~----------- 71 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++|..
T Consensus 29 ~~~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~-~G~iCl~iL~~~~~~~~~~~~~ 105 (164)
T 3h8k_A 29 NEENFF--EWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP-DGRVCISILHAPGDDPMGYESS 105 (164)
T ss_dssp STTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT-TSBBCCGGGSCSCSCCCSCCTT
T ss_pred CCCCcc--EEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC-CCcEeeecccCccccccccccc
Confidence 456888 9999999999999999999999999999999999999999999999996 99999999941
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 72 LANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 72 ~~~W~p~~~l~~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
.+.|+|+++|++||.+|+++|.+|++++++|.+++..|.
T Consensus 106 ~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~ 144 (164)
T 3h8k_A 106 AERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWR 144 (164)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHH
Confidence 278999999999999999999999999999999999883
No 9
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-37 Score=218.92 Aligned_cols=102 Identities=30% Similarity=0.516 Sum_probs=98.4
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
++||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|.||+++| .++|+|++++.
T Consensus 34 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL--~~~W~p~~~i~ 108 (156)
T 2e2c_A 34 DGDNLF--KWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ-SGNICLDIL--KENWTASYDVR 108 (156)
T ss_dssp SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCBBCCGGG--TTTCCTTCCHH
T ss_pred CCCCcc--EEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc-CceEECccc--cccCCCCCcHH
Confidence 467888 9999999999999999999999999999999999999999999999997 999999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 109 ~vL~si~~ll~~pn~~~p~n~~aa~~~ 135 (156)
T 2e2c_A 109 TILLSLQSLLGEPNNASPLNAQAADMW 135 (156)
T ss_dssp HHHHHHHHHTTSCCCSSCSCHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHh
Confidence 999999999999999999999999988
No 10
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.3e-37 Score=219.71 Aligned_cols=104 Identities=27% Similarity=0.437 Sum_probs=98.9
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||++.+|.||+++|. ++|+|++++.
T Consensus 36 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~--~~W~p~~~i~ 111 (159)
T 2bep_A 36 VDENFT--ELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILK--DQWAAAMTLR 111 (159)
T ss_dssp CSSSSS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGT--TTCCTTCCHH
T ss_pred CCCchh--eEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhh--ccCCCCCcHH
Confidence 356787 999999999999999999999999999999999999999999999999769999999994 8899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||.+|+++|.+|++++++|.+++..|.
T Consensus 112 ~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 139 (159)
T 2bep_A 112 TVLLSLQALLAAAEPDDPQDAVVANQYK 139 (159)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 9999999999999999999999999883
No 11
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.5e-37 Score=217.85 Aligned_cols=102 Identities=25% Similarity=0.510 Sum_probs=98.4
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
++||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++|. ++|+|++++.
T Consensus 29 ~~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~ 103 (151)
T 4gpr_A 29 VGDDIF--HWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK-NGVICLDILK--DQWSPALTLS 103 (151)
T ss_dssp SSSCTT--EEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCBBCCGGGT--TTCCTTCCHH
T ss_pred cCCCce--EEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC-CCEEEccccc--CCCCCCCcHH
Confidence 457888 9999999999999999999999999999999999999999999999997 9999999994 9999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++.+|
T Consensus 104 ~vl~~i~~ll~~p~~~~p~n~~aa~~~ 130 (151)
T 4gpr_A 104 RVLLSISSLLTDPNPSDPLDPEVANVL 130 (151)
T ss_dssp HHHHHHHHHHHCCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCchhHHHHHHH
Confidence 999999999999999999999999988
No 12
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-37 Score=221.56 Aligned_cols=102 Identities=25% Similarity=0.463 Sum_probs=98.0
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++| .+.|+|+++|.
T Consensus 29 ~~~nl~--~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~-~G~ICl~iL--~~~WsP~~~i~ 103 (169)
T 1ayz_A 29 LPDNVM--VWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYA-NGEICLDIL--QNRWTPTYDVA 103 (169)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TSBBCCGGG--TTTCCTTCCHH
T ss_pred cCCccc--cceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCC-CCeEeehhh--ccCCCCcCcHH
Confidence 356777 9999999999999999999999999999999999999999999999997 999999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||++|+++|.+|++++++|.+++..|
T Consensus 104 ~vL~si~~ll~~Pn~~~P~n~~aa~~~ 130 (169)
T 1ayz_A 104 SILTSIQSLFNDPNPASPANVEAATLF 130 (169)
T ss_dssp HHHHHHHHHHTCCCCSSCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999988
No 13
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=3.3e-37 Score=223.40 Aligned_cols=107 Identities=27% Similarity=0.457 Sum_probs=100.0
Q ss_pred CCCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC----------
Q 033234 2 DDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM---------- 71 (124)
Q Consensus 2 ~~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~---------- 71 (124)
++++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++ +|+||+++|..
T Consensus 32 ~~~~nl~--~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~-~G~iClsiL~~~~~~~~~~~~ 108 (183)
T 3rz3_A 32 VDEGDLY--NWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE-TGDVCISILHPPVDDPQSGEL 108 (183)
T ss_dssp CTTCCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT-TSBBCCTTC------------
T ss_pred cCccchh--heeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC-CCcEehhhcCccccccccccc
Confidence 5678888 9999999999999999999999999999999999999999999999997 99999999941
Q ss_pred -CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCccCccccc
Q 033234 72 -LANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGNEDAR 111 (124)
Q Consensus 72 -~~~W~p~~~l~~il~~i~~~l~~P~~~~~~~~~~~~~~~~ 111 (124)
.+.|+|+++|++||++|+++|.+|++++++|.+|+..|+.
T Consensus 109 ~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~ 149 (183)
T 3rz3_A 109 PSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRK 149 (183)
T ss_dssp --CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHH
T ss_pred ccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHh
Confidence 2899999999999999999999999999999999998854
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=3.6e-37 Score=217.93 Aligned_cols=103 Identities=23% Similarity=0.417 Sum_probs=98.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|.||+++| .++|+|++++.
T Consensus 30 ~~~~l~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL--~~~W~p~~~i~ 104 (155)
T 1jat_A 30 HDDNLR--YFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR-LGRICLDVL--KTNWSPALQIR 104 (155)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TCCBCCGGG--TTTCCTTCCHH
T ss_pred CCCchh--EEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC-CCEEEchhh--ccCCCCCCCHH
Confidence 457777 9999999999999999999999999999999999999999999999995 999999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||.+|+++|.+|++++++|.+++..|.
T Consensus 105 ~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 132 (155)
T 1jat_A 105 TVLLSIQALLASPNPNDPLANDVAEDWI 132 (155)
T ss_dssp HHHHHHHHHHHSCCTTSTTCCTTHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 9999999999999999999999999883
No 15
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=4.2e-37 Score=219.69 Aligned_cols=102 Identities=26% Similarity=0.508 Sum_probs=98.1
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|. ++|+|+++|.
T Consensus 44 ~~~nl~--~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~-~G~ICl~iL~--~~W~P~~ti~ 118 (165)
T 2c4o_A 44 VGDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILR--SQWSPALTIS 118 (165)
T ss_dssp SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-TCBBCCGGGT--TTCCTTCCHH
T ss_pred cCCCcc--eeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC-CCeEeehhhc--CCCCCcCcHH
Confidence 457888 9999999999999999999999999999999999999999999999997 9999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 119 ~vL~si~~ll~~pn~~~P~n~~aa~~~ 145 (165)
T 2c4o_A 119 KVLLSICSLLCDPNPDDPLVPEIARIY 145 (165)
T ss_dssp HHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCccccHHHHHHH
Confidence 999999999999999999999999888
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.3e-37 Score=218.59 Aligned_cols=103 Identities=23% Similarity=0.411 Sum_probs=96.9
Q ss_pred CCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHHHH
Q 033234 5 DDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDI 84 (124)
Q Consensus 5 dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~~i 84 (124)
+|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++|...+.|+|+++|.+|
T Consensus 36 ~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~~~~~W~p~~~i~~v 112 (157)
T 2gjd_A 36 MDLQ--KWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYP-SGTICLSILNEDQDWRPAITLKQI 112 (157)
T ss_dssp EEEE--EEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCT-TSBBCCGGGCTTTTCCTTCCHHHH
T ss_pred Cccc--EEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCC-CCcEeeecccCCCCCCCCCcHHHH
Confidence 4677 9999999999999999999999999999999999999999999999996 999999999622379999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 85 LTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 85 l~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
|.+|+++|.+|++++++|.+++..|.
T Consensus 113 l~~i~~ll~~p~~~~p~n~~aa~~~~ 138 (157)
T 2gjd_A 113 VLGVQDLLDSPNPNSPAQEPAWRSFS 138 (157)
T ss_dssp HHHHHHHHTSCCTTCCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCccCHHHHHHHH
Confidence 99999999999999999999999983
No 17
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-37 Score=219.58 Aligned_cols=101 Identities=27% Similarity=0.447 Sum_probs=96.3
Q ss_pred CCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHHHHH
Q 033234 6 DILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDIL 85 (124)
Q Consensus 6 d~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~~il 85 (124)
|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++|...++|+|+++|++||
T Consensus 43 nl~--~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~-~G~iCl~iL~~~~~W~p~~ti~~vL 119 (163)
T 3rcz_B 43 DLM--NWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYP-SGTVCLSILNEEEGWKPAITIKQIL 119 (163)
T ss_dssp EEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT-TSBBCCGGGCTTTTCCTTCCHHHHH
T ss_pred Ccc--EEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCC-CCcEeccccCCCCCcCCcCcHHHHH
Confidence 666 9999999999999999999999999999999999999999999999996 9999999996334699999999999
Q ss_pred HHHHHHhcCCCCCCCCCCccCccc
Q 033234 86 TQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 86 ~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
.+|+++|.+|++++++|.+++..|
T Consensus 120 ~~i~~ll~~P~~~~p~n~~aa~~~ 143 (163)
T 3rcz_B 120 LGIQDLLDDPNIASPAQTEAYTMF 143 (163)
T ss_dssp HHHHHHHTSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHhCCCCCCccCHHHHHHH
Confidence 999999999999999999999988
No 18
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.8e-37 Score=217.32 Aligned_cols=102 Identities=27% Similarity=0.532 Sum_probs=97.7
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|. ++|+|++++.
T Consensus 29 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~ 103 (150)
T 1z2u_A 29 VGDDLF--HWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILR--SQWSPALTIS 103 (150)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCBBCCGGGT--TTCCTTCCHH
T ss_pred CCCcce--EEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC-CCeEeecccc--CCCCCCCCHH
Confidence 356777 9999999999999999999999999999999999999999999999997 9999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 104 ~vl~~i~~ll~~pn~~~p~n~~aa~~~ 130 (150)
T 1z2u_A 104 KVLLSICSLLCDPNPDDPLVPEIARIY 130 (150)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCccCHHHHHHH
Confidence 999999999999999999999999888
No 19
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.5e-37 Score=216.43 Aligned_cols=99 Identities=46% Similarity=0.946 Sum_probs=93.4
Q ss_pred CCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCee---eccCCCCCCCCCCCCCHH
Q 033234 6 DILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMV---EPSLFPMLANWQREYTME 82 (124)
Q Consensus 6 d~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~i---cl~~l~~~~~W~p~~~l~ 82 (124)
|++ +|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+. +|+| |+++| .+|+|+++++
T Consensus 53 nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~G~icisCL~iL---~~WsP~~ti~ 126 (156)
T 2q0v_A 53 TLS--NWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDN-CGRVIKNNLHIL---KNWNRNYTIE 126 (156)
T ss_dssp TCC--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCT-TSBBCGGGSHHH---HTCCTTCCHH
T ss_pred cce--eeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCcc-CCeEehhhcccc---cCCCCcCcHH
Confidence 466 9999999999999999999999999999999999999999999999997 7999 77777 3699999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||++|+++|.+|++++++|++|++.|.
T Consensus 127 ~vL~sI~~ll~~Pn~~~p~n~~aa~~y~ 154 (156)
T 2q0v_A 127 TILISLRQEMLSSANKRLPQPNEGEVYS 154 (156)
T ss_dssp HHHHHHHHHTTSTTTTTCCCCCTTCBC-
T ss_pred HHHHHHHHHHhCCCCCCcCChHHHHHhh
Confidence 9999999999999999999999999984
No 20
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.4e-36 Score=216.16 Aligned_cols=104 Identities=43% Similarity=0.840 Sum_probs=94.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
++||+++++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+..+|+||+++|...++|+|+++++
T Consensus 52 ~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~ 131 (160)
T 2a4d_A 52 DDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIK 131 (160)
T ss_dssp STTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHH
T ss_pred CCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCccCCCccCcHH
Confidence 55653344999999999999999999999999999999999999999999999999669999999984227999999999
Q ss_pred HHHHHHHHHhc-CCCCCCCCCCccC
Q 033234 83 DILTQLKKEMM-SPQNWKLAQPPEG 106 (124)
Q Consensus 83 ~il~~i~~~l~-~P~~~~~~~~~~~ 106 (124)
+||++|+++|. +|+.+++++.+|+
T Consensus 132 ~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 132 VVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp HHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred HHHHHHHHHHccCCCCCCCCChhhc
Confidence 99999999995 6999999998877
No 21
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5e-37 Score=219.98 Aligned_cols=104 Identities=22% Similarity=0.385 Sum_probs=98.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC--CCCCCCCCC
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM--LANWQREYT 80 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~--~~~W~p~~~ 80 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. .++|+|+++
T Consensus 29 ~~~~l~--~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~-~G~iCl~iL~~~~~~~W~p~~~ 105 (169)
T 1yh2_A 29 DKDQMD--DLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDS-AGRICLDVLKLPPKGAWRPSLN 105 (169)
T ss_dssp SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCBBCCGGGSCTTTSCCCTTSC
T ss_pred CCCchh--eEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCc-CCeEecccccCCcccCCCCCCc
Confidence 467888 9999999999999999999999999999999999999999999999995 99999999841 189999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 81 MEDILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 81 l~~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
|.+||.+|+++|.+|++++++|.+++.+|
T Consensus 106 i~~vL~si~~ll~~p~~~~p~n~~aa~~~ 134 (169)
T 1yh2_A 106 IATVLTSIQLLMSEPNPDDPLMADISSEF 134 (169)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcchHhHHHHHHH
Confidence 99999999999999999999999999888
No 22
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.1e-37 Score=217.53 Aligned_cols=102 Identities=25% Similarity=0.539 Sum_probs=98.0
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|.||+++| .++|+|++++.
T Consensus 29 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL--~~~W~p~~~i~ 103 (152)
T 2aak_A 29 QDNNIM--LWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDIL--QNQWSPIYDVA 103 (152)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TSBBCCGGG--TTSCCTTCCHH
T ss_pred CCCCcc--EEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCC-CCEEechhh--cCCCCCCCcHH
Confidence 457777 9999999999999999999999999999999999999999999999997 999999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 104 ~vl~~i~~ll~~p~~~~p~n~~aa~~~ 130 (152)
T 2aak_A 104 AILTSIQSLLCDPNPNSPANSEAARMY 130 (152)
T ss_dssp HHHHHHHHHHTSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCccccHHHHHHH
Confidence 999999999999999999999999888
No 23
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=5.1e-37 Score=220.50 Aligned_cols=106 Identities=21% Similarity=0.348 Sum_probs=100.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeee-ecccCCccCCCCeeeccCCCCCCCCCCCCCH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQT-RINMTCVNQETGMVEPSLFPMLANWQREYTM 81 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t-~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l 81 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.| +||||||+.++|.||+++|. .+.|+|++++
T Consensus 43 ~~~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~-~~~W~p~~~i 119 (172)
T 2y9m_A 43 DETDLS--KWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILK-PEEWTPVWDL 119 (172)
T ss_dssp STTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGS-TTTCCTTCCH
T ss_pred CCCchh--EEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccC-CCCCCCcCcH
Confidence 677888 9999999999999999999999999999999999999999 99999997569999999994 4899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCccCccccc
Q 033234 82 EDILTQLKKEMMSPQNWKLAQPPEGNEDAR 111 (124)
Q Consensus 82 ~~il~~i~~~l~~P~~~~~~~~~~~~~~~~ 111 (124)
.+||.+|+++|.+|++++++|.+++..|..
T Consensus 120 ~~vL~si~~ll~~p~~~~p~n~~aa~~~~~ 149 (172)
T 2y9m_A 120 LHCVHAVWRLLREPVCDSPLDVDIGNIIRC 149 (172)
T ss_dssp HHHHHHHHHHHHSCCTTSCSSHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCCCccCHHHHHHHHh
Confidence 999999999999999999999999988854
No 24
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-37 Score=222.54 Aligned_cols=102 Identities=25% Similarity=0.429 Sum_probs=98.1
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
++||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|+||+++| .+.|+|+++|.
T Consensus 55 ~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~-~G~ICL~iL--~~~WsP~~ti~ 129 (179)
T 1i7k_A 55 ESDNLF--KWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT-QGNISLDIL--KEKWSALYDVR 129 (179)
T ss_dssp ETTEEE--EEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT-TCBBCCGGG--TTTCCTTCCHH
T ss_pred cCCccc--ccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc-CCeEEcccC--cCcCCCCCCHH
Confidence 456777 9999999999999999999999999999999999999999999999997 899999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||++|+++|.+|++++++|.+++..|
T Consensus 130 ~vL~sI~sll~~Pn~~~Pln~~aa~l~ 156 (179)
T 1i7k_A 130 TILLSIQSLLGEPNIDSPLNTHAAELW 156 (179)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHT
T ss_pred HHHHHHHHHHhCCCCcchhhHHHHHHh
Confidence 999999999999999999999999988
No 25
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=6e-37 Score=224.82 Aligned_cols=103 Identities=27% Similarity=0.438 Sum_probs=98.9
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||++.+|.||+++| .++|+|++++.
T Consensus 33 ~~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL--~~~W~p~~~i~ 108 (201)
T 3k9o_A 33 VDENFT--ELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL--KDQWAAAMTLR 108 (201)
T ss_dssp CSTTSS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGG--TTTCCTTCCHH
T ss_pred CCCCcc--EEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCccc--ccCCCCCCCHH
Confidence 356888 99999999999999999999999999999999999999999999999976999999999 49999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++..|
T Consensus 109 ~vL~~i~~ll~~p~p~~p~n~~aa~~~ 135 (201)
T 3k9o_A 109 TVLLSLQALLAAAEPDDPQDAVVANQY 135 (201)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHH
Confidence 999999999999999999999999988
No 26
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-37 Score=219.21 Aligned_cols=103 Identities=24% Similarity=0.440 Sum_probs=98.7
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||+. +|+||+++|. +.|+|++++.
T Consensus 38 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~ 112 (158)
T 1zdn_A 38 NEEDLT--DLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGA-NGEICVNVLK--RDWTAELGIR 112 (158)
T ss_dssp CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TSBBCHHHHT--TTCCTTCCHH
T ss_pred CCCChh--heeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCC-CCEEehhhcC--CCCCCCCcHH
Confidence 567888 9999999999999999999999999999999999999999999999997 7999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||.+|+++|.+|++++++|.+++..|.
T Consensus 113 ~vL~~i~~ll~~pn~~~p~n~~aa~~~~ 140 (158)
T 1zdn_A 113 HVLLTIKCLLIHPNPESALNEEAGRLLL 140 (158)
T ss_dssp HHHHHHHHHHHSCCGGGCSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 9999999999999999999999999883
No 27
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.4e-37 Score=217.77 Aligned_cols=103 Identities=19% Similarity=0.372 Sum_probs=98.6
Q ss_pred CCCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCH
Q 033234 2 DDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTM 81 (124)
Q Consensus 2 ~~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l 81 (124)
++++|++ +|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|. ++|+|++++
T Consensus 29 ~~~~~l~--~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i 102 (160)
T 1y8x_A 29 SDPDDLL--NFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-EGNVCLNILR--EDWKPVLTI 102 (160)
T ss_dssp SSTTCTT--EEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TCBBCCGGGT--TTCCTTCCH
T ss_pred ccCCccc--eEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC-CCeEEcccch--hhccCCCCH
Confidence 5678888 999998 999999999999999999999999999999999999999997 8999999994 899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 82 EDILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 82 ~~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
.+||.+|+++|.+|++++++|.+++..|.
T Consensus 103 ~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~ 131 (160)
T 1y8x_A 103 NSIIYGLQYLFLEPNPEDPLNKEAAEVLQ 131 (160)
T ss_dssp HHHHHHHHHHHHSCCCSSCSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCccCHHHHHHHH
Confidence 99999999999999999999999999883
No 28
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-37 Score=221.49 Aligned_cols=105 Identities=24% Similarity=0.375 Sum_probs=98.5
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+..+|+||+++|...++|+|+++|.
T Consensus 48 ~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~ 125 (169)
T 1yrv_A 48 VSEDMM--EWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLS 125 (169)
T ss_dssp CSTTSC--EEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHH
T ss_pred cCCccc--cceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCCcCCCCcCCHH
Confidence 467888 999999999999999999999999999999999999999999999995459999999994127999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+|+..|
T Consensus 126 ~vL~sI~sll~~Pn~~~Pln~eaa~l~ 152 (169)
T 1yrv_A 126 SILLALQVMLSNPVLENPVNLEAARIL 152 (169)
T ss_dssp HHHHHHHHHHTSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHH
Confidence 999999999999999999999999988
No 29
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-37 Score=223.69 Aligned_cols=103 Identities=25% Similarity=0.460 Sum_probs=98.3
Q ss_pred CCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHHH
Q 033234 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMED 83 (124)
Q Consensus 4 ~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~~ 83 (124)
++|++ +|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|.||+++|. ++|+|+++|.+
T Consensus 71 ~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~--~~WsP~~ti~~ 146 (193)
T 2f4z_A 71 GGDIH--RWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILK--HEWSPALTIRT 146 (193)
T ss_dssp TTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGT--TTCCTTSCHHH
T ss_pred CCCcc--eEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECcccc--ccCCCCCCHHH
Confidence 46777 999999999999999999999999999999999999999999999999669999999994 88999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 84 ILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 84 il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
||++|+++|.+|++++++|.+++..|.
T Consensus 147 vL~sI~sll~~pnp~~P~n~~aa~l~~ 173 (193)
T 2f4z_A 147 ALLSIQAMLADPVPTDPQDAEVAKMMI 173 (193)
T ss_dssp HHHHHHHHHHSCCTTSCSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 999999999999999999999999883
No 30
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=7.9e-37 Score=217.41 Aligned_cols=103 Identities=23% Similarity=0.438 Sum_probs=97.4
Q ss_pred CCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHHH
Q 033234 4 ADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMED 83 (124)
Q Consensus 4 ~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~~ 83 (124)
++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|.||+++|...++|+|++++.+
T Consensus 38 ~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~~~~~W~p~~~i~~ 114 (161)
T 2grr_A 38 TMNLM--NWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSILEEDKDWRPAITIKQ 114 (161)
T ss_dssp CEEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCT-TSBBCCGGGCTTTTCCTTCCHHH
T ss_pred CCCcc--EEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCC-CCeEeehhcCCCCCcCCCCcHHH
Confidence 45777 9999999999999999999999999999999999999999999999996 99999999962258999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 84 ILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 84 il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
||.+|+++|.+|++++++|.+++..|
T Consensus 115 vl~~i~~ll~~p~~~~p~n~~aa~~~ 140 (161)
T 2grr_A 115 ILLGIQELLNEPNIQSPAQAEAYTIY 140 (161)
T ss_dssp HHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 99999999999999999999999988
No 31
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.9e-37 Score=228.08 Aligned_cols=103 Identities=24% Similarity=0.459 Sum_probs=98.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.++|++ +|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|.||+++|. +.|+|+++|.
T Consensus 48 ~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~--~~WsP~~ti~ 123 (216)
T 2pwq_A 48 KDSNFF--EWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLK--NEWSPALTIR 123 (216)
T ss_dssp CSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHH--HHCCTTCCHH
T ss_pred cCCccc--eeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhc--ccCCCCCcHH
Confidence 456788 999999999999999999999999999999999999999999999999669999999994 8899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||++|+++|.+|++++++|.+++..|
T Consensus 124 ~VL~sI~sLL~~Pnp~dPln~eaa~~~ 150 (216)
T 2pwq_A 124 TALLSIQALLSDPQPDDPQDAEVAKMY 150 (216)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 999999999999999999999999888
No 32
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-36 Score=219.89 Aligned_cols=102 Identities=20% Similarity=0.386 Sum_probs=98.4
Q ss_pred CCCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCH
Q 033234 2 DDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTM 81 (124)
Q Consensus 2 ~~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l 81 (124)
+++||++ +|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|. ++|+|++++
T Consensus 49 p~~~nl~--~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~G~iCl~iL~--~~W~p~~~i 122 (180)
T 2nvu_C 49 SDPDDLL--NFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-EGNVALNILR--EDWKPVLTI 122 (180)
T ss_dssp SSTTCTT--EEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TSBBCCGGGT--TSCCTTCCH
T ss_pred ccccccc--ceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC-CCcEEccccc--ccCCCCCCH
Confidence 5678888 999998 999999999999999999999999999999999999999997 8999999994 899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 82 EDILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 82 ~~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
.+||.+|+++|.+|++++++|.+++..|
T Consensus 123 ~~vL~si~~ll~~Pn~~~p~n~~aa~~~ 150 (180)
T 2nvu_C 123 NSIIYGLQYLFLEPNPEDPLNKEAAEVL 150 (180)
T ss_dssp HHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 9999999999999999999999999988
No 33
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.3e-36 Score=220.00 Aligned_cols=102 Identities=26% Similarity=0.511 Sum_probs=98.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||+||||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++| .++|+|+++|.
T Consensus 73 ~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~-~G~ICL~iL--~~~WsP~~ti~ 147 (194)
T 3bzh_A 73 KGDNIY--EWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS-QGVICLDIL--KDNWSPALTIS 147 (194)
T ss_dssp SSSCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT-TCBBCCGGG--TTTCCTTCCHH
T ss_pred ccCccc--cceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC-CCceechhh--hccCCCcCcHH
Confidence 467888 9999999999999999999999999999999999999999999999997 899999999 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||++|+++|.+|++++++|.+++..|
T Consensus 148 ~vL~sI~~ll~~pnp~~Pln~~aa~l~ 174 (194)
T 3bzh_A 148 KVLLSICSLLTDCNPADPLVGSIATQY 174 (194)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCccchhHHHHHHH
Confidence 999999999999999999999999888
No 34
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=215.80 Aligned_cols=104 Identities=43% Similarity=0.840 Sum_probs=93.8
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|+++++|+++|.||++||||||.|+++|.||++||++||+|+|.|+||||||+..+|+||+++|...+.|+|+++|+
T Consensus 62 ~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~ 141 (170)
T 2hlw_A 62 DDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIK 141 (170)
T ss_dssp STTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHH
T ss_pred CcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHH
Confidence 55553334999999999999999999999999999999999999999999999999669999999984227999999999
Q ss_pred HHHHHHHHHhc-CCCCCCCCCCccC
Q 033234 83 DILTQLKKEMM-SPQNWKLAQPPEG 106 (124)
Q Consensus 83 ~il~~i~~~l~-~P~~~~~~~~~~~ 106 (124)
+||.+|+++|. +|+.+++++.+|+
T Consensus 142 ~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 142 VVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp HHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred HHHHHHHHHHccCCCCCCCCCcccc
Confidence 99999999997 5999999988877
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=4.7e-37 Score=216.83 Aligned_cols=103 Identities=18% Similarity=0.339 Sum_probs=97.7
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.+||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+..+|.||+++|. +.|+|++++.
T Consensus 24 ~~~~l~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~--~~W~p~~~i~ 99 (152)
T 2onu_A 24 NNGSTQ--DFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVIN--QTWTPLYSLV 99 (152)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHH--HHCCTTCCHH
T ss_pred ccCccc--eEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEeccccc--ccCCCCCCHH
Confidence 357777 999999999999999999999999999999999999999999999999669999999994 8899999999
Q ss_pred HHHHH-HHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQ-LKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~-i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+ |+++|.+|++++++|.+++..|
T Consensus 100 ~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~ 127 (152)
T 2onu_A 100 NVFEVFLPQLLTYPNPSDPLNSDAASLL 127 (152)
T ss_dssp HHHHTHHHHHHHSCCCSSCSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 99999 6899999999999999999988
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=5.4e-37 Score=227.19 Aligned_cols=103 Identities=23% Similarity=0.437 Sum_probs=98.0
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
++++++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+..+|.||+++|. +.|+|++++.
T Consensus 28 ~~~~l~--~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~--~~WsP~~ti~ 103 (215)
T 1tte_A 28 SESDIH--HLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILR--NAWSPVITLK 103 (215)
T ss_dssp SSSSCC--EEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTT--CCSCTTCCHH
T ss_pred CCcccc--ccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCC--CCCCCcCcHH
Confidence 445677 999999999999999999999999999999999999999999999999769999999994 8999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|+++++++.+++..|
T Consensus 104 ~VL~sI~sLL~~Pnp~~Pln~eaa~~~ 130 (215)
T 1tte_A 104 SALISLQALLQSPEPNDPQDAEVAQHY 130 (215)
T ss_dssp HHHHHHHHHHTSCCCSSCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999999999999999999999999888
No 37
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-35 Score=203.30 Aligned_cols=93 Identities=25% Similarity=0.429 Sum_probs=82.8
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeec-ccCCccCCCCeeeccCCCCCCCCCCCCCH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRI-NMTCVNQETGMVEPSLFPMLANWQREYTM 81 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i-~Hpnv~~~~G~icl~~l~~~~~W~p~~~l 81 (124)
++||++ +|+++|.||++||||||.|+++|.||++||++||+|+|.|++ |||||+. +|+||+++| .++|+|++++
T Consensus 31 ~~~~l~--~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~-~G~iCl~iL--~~~W~P~~~i 105 (125)
T 2fo3_A 31 HPNNIR--IWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS-NGDICLSLL--GDDYNPSLSI 105 (125)
T ss_dssp CTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT-TSBBCCGGG--TTTCCTTCCH
T ss_pred Ccchhh--hhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC-CCEEEchhc--CCCCCCCCcH
Confidence 567888 999999999999999999999999999999999999999997 9999997 999999999 4899999999
Q ss_pred HHHHHHHHHHhcCCCCCCC
Q 033234 82 EDILTQLKKEMMSPQNWKL 100 (124)
Q Consensus 82 ~~il~~i~~~l~~P~~~~~ 100 (124)
++||.+|+++|.+|+.++.
T Consensus 106 ~~vl~si~~ll~~p~~~~~ 124 (125)
T 2fo3_A 106 SGLVLSIISMLSSAKEKKL 124 (125)
T ss_dssp HHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHhCcccccC
Confidence 9999999999999988754
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=7e-36 Score=211.02 Aligned_cols=103 Identities=21% Similarity=0.467 Sum_probs=97.9
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|.||+++|. .++|+|++++.
T Consensus 28 ~~~~l~--~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~iCl~iL~-~~~W~p~~~i~ 102 (154)
T 1c4z_D 28 DEANLL--TWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE-KGQVCLPVIS-AENWKPATKTD 102 (154)
T ss_dssp SCSSSS--EEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TCBBCCTTTS-SSSCCTTCCHH
T ss_pred CCCchh--eEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC-CCEEECCCCC-CCCCCCCCcHH
Confidence 567888 9999998 99999999999999999999999999999999999999997 9999999994 48999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCcccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNEDA 110 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~~ 110 (124)
+||.+|+++|.+|++++++|.+++..|.
T Consensus 103 ~vl~~i~~ll~~p~~~~p~n~~aa~~~~ 130 (154)
T 1c4z_D 103 QVIQSLIALVNDPQPEHPLRADLAEEYS 130 (154)
T ss_dssp HHHHHHHHHHHSCCCSSCSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCchhhHHHHHHHH
Confidence 9999999999999999999999998883
No 39
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=4.3e-36 Score=212.31 Aligned_cols=102 Identities=19% Similarity=0.370 Sum_probs=98.2
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+. +|.||+++|. .++|+|++++.
T Consensus 30 ~~~~l~--~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~-~G~iCl~iL~-~~~W~p~~~i~ 104 (155)
T 1wzv_A 30 DDANVL--VWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE-NGQICLPIIS-SENWKPCTKTC 104 (155)
T ss_dssp CSSCTT--EEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCBCCCGGGC-TTTCCTTCCHH
T ss_pred CCCchh--eEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCC-CCeEeecCCC-ccCCCCCCcHH
Confidence 567888 9999999 99999999999999999999999999999999999999997 9999999994 58999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++++|.+++.+|
T Consensus 105 ~vl~~i~~ll~~p~~~~p~n~~aa~~~ 131 (155)
T 1wzv_A 105 QVLEALNVLVNRPNIREPLRMDLADLL 131 (155)
T ss_dssp HHHHHHHHHHHSCCSSSCSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 999999999999999999999999988
No 40
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=6.8e-36 Score=225.87 Aligned_cols=103 Identities=27% Similarity=0.438 Sum_probs=98.9
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.+||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||++.+|.||+++| .+.|+|+++|.
T Consensus 85 ~~dnl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL--~~~WsP~~ti~ 160 (253)
T 3e46_A 85 VDENFT--ELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL--KDQWAAAMTLR 160 (253)
T ss_dssp CSTTSS--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGG--TTCCCTTCCHH
T ss_pred CCCccc--EEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccc--cCCCCCCCCHH
Confidence 357888 99999999999999999999999999999999999999999999999976999999999 49999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||++|+++|.+|++++++|.+++..|
T Consensus 161 ~vL~sI~~ll~~pnp~~Pln~eaa~l~ 187 (253)
T 3e46_A 161 TVLLSLQALLAAAEPDDPQDAVVANQY 187 (253)
T ss_dssp HHHHHHHHHHHSCCTTSCSCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCChhhHHHHHHH
Confidence 999999999999999999999999988
No 41
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-36 Score=216.86 Aligned_cols=103 Identities=21% Similarity=0.327 Sum_probs=97.9
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
.+||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+..+|.||+++|. ++|+|++++.
T Consensus 33 ~~~~l~--~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~--~~W~p~~~i~ 108 (171)
T 1yf9_A 33 PSDTVA--EFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVIN--QTWTPMYQLE 108 (171)
T ss_dssp ECSSTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHH--HHCCTTCCTH
T ss_pred CCCCce--EEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEeccccc--cCCCCCCcHH
Confidence 367888 999999999999999999999999999999999999999999999999659999999994 8999999999
Q ss_pred HHHHHH-HHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQL-KKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i-~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||++| +++|.+|++++++|.+++..|
T Consensus 109 ~vL~sil~~ll~~Pn~~~p~n~~aa~~~ 136 (171)
T 1yf9_A 109 NIFDVFLPQLLRYPNPSDPLNVQAAHLL 136 (171)
T ss_dssp HHHHTHHHHHHHSCCSSCCSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence 999997 799999999999999999888
No 42
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.9e-35 Score=211.23 Aligned_cols=104 Identities=18% Similarity=0.235 Sum_probs=97.2
Q ss_pred CCCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC----CCCCCC
Q 033234 2 DDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM----LANWQR 77 (124)
Q Consensus 2 ~~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~----~~~W~p 77 (124)
+++||++ +|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. .++|+|
T Consensus 39 ~~~~~l~--~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~iCl~iL~~~~~~~~~W~p 114 (167)
T 3fn1_B 39 PDPNKLH--CFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE-TGEICLSLLREHSIDGTGWAP 114 (167)
T ss_dssp SSSSCTT--EEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT-TCCBCCGGGSBCSSSTTSBCT
T ss_pred CCCCcce--eEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC-CCEEechhhccCCCCCCCCCC
Confidence 4678888 999999 899999999999999999999999999999999999999995 99999999951 138999
Q ss_pred CCCHHHHHHHHHHHhcC-CCCCCCCCCccCccc
Q 033234 78 EYTMEDILTQLKKEMMS-PQNWKLAQPPEGNED 109 (124)
Q Consensus 78 ~~~l~~il~~i~~~l~~-P~~~~~~~~~~~~~~ 109 (124)
+++|.+||.+|+++|.+ |++++++|.+++..|
T Consensus 115 ~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~ 147 (167)
T 3fn1_B 115 TRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHH 147 (167)
T ss_dssp TCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHH
T ss_pred cCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHH
Confidence 99999999999999999 799999999999988
No 43
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=217.36 Aligned_cols=101 Identities=18% Similarity=0.350 Sum_probs=96.9
Q ss_pred CCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHHHH
Q 033234 5 DDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDI 84 (124)
Q Consensus 5 dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~~i 84 (124)
||++ +|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|.||+++|. ++|+|++++.+|
T Consensus 48 ddl~--~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~--~~WsP~~ti~~i 123 (179)
T 2z5d_A 48 GGLN--EFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVIN--QTWTALYDLTNI 123 (179)
T ss_dssp EETT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHH--HHCCTTCCTTHH
T ss_pred CCCc--eeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEeccccc--cCCCCCCCHHHH
Confidence 4666 999999999999999999999999999999999999999999999999769999999994 899999999999
Q ss_pred HHH-HHHHhcCCCCCCCCCCccCccc
Q 033234 85 LTQ-LKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 85 l~~-i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
|++ |+++|.+|++++++|.+++..|
T Consensus 124 L~s~I~~Ll~~Pn~~~p~n~eaa~~~ 149 (179)
T 2z5d_A 124 FESFLPQLLAYPNPIDPLNGDAAAMY 149 (179)
T ss_dssp HHTHHHHHHHSCCCSSCSCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999 9999999999999999999988
No 44
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-34 Score=201.00 Aligned_cols=90 Identities=20% Similarity=0.415 Sum_probs=85.9
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeec-ccCCccCCCCeeeccCCCCCCCCCCCCCH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRI-NMTCVNQETGMVEPSLFPMLANWQREYTM 81 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i-~Hpnv~~~~G~icl~~l~~~~~W~p~~~l 81 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+. +|+||+++|. ++|+|++++
T Consensus 45 ~~~nl~--~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~-~G~ICl~iL~--~~WsP~~ti 119 (136)
T 2h2y_A 45 HPSNIR--IWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS-NGDICLSVLG--DDYNPSLSI 119 (136)
T ss_dssp CTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT-TCCBCCGGGT--TTCCTTCCH
T ss_pred cccccc--ccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC-CCEEECcccc--CCCCCCCcH
Confidence 467888 999999999999999999999999999999999999999997 9999997 9999999994 899999999
Q ss_pred HHHHHHHHHHhcCCCC
Q 033234 82 EDILTQLKKEMMSPQN 97 (124)
Q Consensus 82 ~~il~~i~~~l~~P~~ 97 (124)
++||.+|+++|.+|+.
T Consensus 120 ~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 120 SGLILSIISMLSSAKE 135 (136)
T ss_dssp HHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHhCcCc
Confidence 9999999999999875
No 45
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4.9e-35 Score=213.18 Aligned_cols=104 Identities=16% Similarity=0.192 Sum_probs=98.5
Q ss_pred CCCCCCccc-eEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCC
Q 033234 2 DDADDILMQ-SWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYT 80 (124)
Q Consensus 2 ~~~dd~~l~-~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~ 80 (124)
+++||++++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++|. ++|+|+++
T Consensus 55 p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~-~G~iCl~iL~--~~W~p~~~ 130 (190)
T 3o2u_A 55 PDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDL-KGNVCLNILR--EDWSPALD 130 (190)
T ss_dssp TTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCT-TSBBCCGGGT--TTCCTTCC
T ss_pred CCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCC-CCeEechhcc--CCCCCCCC
Confidence 567777666 9999997 88899999999999999999999999999999999999997 9999999994 99999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 81 MEDILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 81 l~~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+.+||.+|+++|.+|++++++|.+++..|
T Consensus 131 i~~vL~~i~~ll~~pn~~~pln~~aa~~~ 159 (190)
T 3o2u_A 131 LQSIITGLLFLFLEPNPNDPLNKDAAKLL 159 (190)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcchhHHHHHHH
Confidence 99999999999999999999999999988
No 46
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-33 Score=196.45 Aligned_cols=87 Identities=21% Similarity=0.398 Sum_probs=82.8
Q ss_pred CCCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecc--cCCccCCCCeeeccCCCCCCCCCCCC
Q 033234 2 DDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRIN--MTCVNQETGMVEPSLFPMLANWQREY 79 (124)
Q Consensus 2 ~~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~--Hpnv~~~~G~icl~~l~~~~~W~p~~ 79 (124)
+++||++ +|+++|.||+|||||||.|+++|.||++||++||+|+|.|++| ||||+. +|+||+++|. ++|+|++
T Consensus 48 ~~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~-~G~ICL~iL~--~~WsP~~ 122 (136)
T 2a7l_A 48 SVQNSIT--QWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYS-NGHICLSILT--EDWSPAL 122 (136)
T ss_dssp CCCCSCE--EEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCT-TCBBCCGGGT--TTCCTTS
T ss_pred eCccccc--eeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCC-CCeEEchhcC--CCCCCCC
Confidence 4678888 9999999999999999999999999999999999999999999 999997 9999999994 9999999
Q ss_pred CHHHHHHHHHHHhc
Q 033234 80 TMEDILTQLKKEMM 93 (124)
Q Consensus 80 ~l~~il~~i~~~l~ 93 (124)
++++||.+|+++|+
T Consensus 123 ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 123 SVQSVCLSIISMLS 136 (136)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHhC
Confidence 99999999999984
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=8.9e-34 Score=226.02 Aligned_cols=102 Identities=26% Similarity=0.514 Sum_probs=98.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTME 82 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~ 82 (124)
+++|++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||++ +|.||+++| .++|+|++++.
T Consensus 28 ~~~nl~--~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~iCl~il--~~~W~p~~~i~ 102 (399)
T 4ddg_A 28 VGDDMF--HWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSISLDIL--RSQWSPALTIS 102 (399)
T ss_dssp ETTEEE--EEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT-TCBBCCGGG--TTSCCTTCCHH
T ss_pred cCCcce--EEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC-CCeEeCccc--ccCCCccccHH
Confidence 457777 9999999999999999999999999999999999999999999999997 999999999 49999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCccCccc
Q 033234 83 DILTQLKKEMMSPQNWKLAQPPEGNED 109 (124)
Q Consensus 83 ~il~~i~~~l~~P~~~~~~~~~~~~~~ 109 (124)
+||.+|+++|.+|++++|+|.+++..|
T Consensus 103 ~vL~~i~~ll~~pnp~~p~n~~aa~~~ 129 (399)
T 4ddg_A 103 KVLLSICSLLCDPNPDDPLVPEIARIY 129 (399)
T ss_dssp HHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCchhhHHHHHHH
Confidence 999999999999999999999999988
No 48
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.98 E-value=1.6e-33 Score=201.35 Aligned_cols=102 Identities=25% Similarity=0.456 Sum_probs=94.4
Q ss_pred CCCCCccceEEEEEECCCCCCCC--CCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCC
Q 033234 3 DADDILMQSWTGTIIGPPNTVHE--GRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYT 80 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpye--gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~ 80 (124)
+++|++ +|+++|.||++|||+ ||.|+++|.||++||++||+|+|.|+||||||+. +|.||+++| .++|+|+++
T Consensus 45 ~~~nl~--~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~iCl~il--~~~W~p~~~ 119 (167)
T 4ds2_A 45 DTDTIY--NWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTG-EGGICDRMV--NDFWTPDQH 119 (167)
T ss_dssp EESSTT--EEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCT-TSCCCTHHH--HTTCCTTSC
T ss_pred CCCccc--EEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCC-CCEEEcccC--cCCCCCCCC
Confidence 467888 999999999999999 9999999999999999999999999999999995 999999999 499999999
Q ss_pred HHHHHH-HHHHHhcC--CCCCCCCCCccCccc
Q 033234 81 MEDILT-QLKKEMMS--PQNWKLAQPPEGNED 109 (124)
Q Consensus 81 l~~il~-~i~~~l~~--P~~~~~~~~~~~~~~ 109 (124)
+.++|+ .|++++.+ |++++++|.+|+..|
T Consensus 120 i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~ 151 (167)
T 4ds2_A 120 ASDVIKLVLDRVFSQYKSRRDDDVNPEARHYL 151 (167)
T ss_dssp HHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCcchHhHHHHHHH
Confidence 999765 56777774 899999999999988
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=3.3e-31 Score=205.73 Aligned_cols=100 Identities=18% Similarity=0.322 Sum_probs=92.1
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeee-----cccCCccCCCCeeeccCCCC-----C
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTR-----INMTCVNQETGMVEPSLFPM-----L 72 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~-----i~Hpnv~~~~G~icl~~l~~-----~ 72 (124)
++||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ +|||||+. +|.||+++|.. .
T Consensus 105 ~ednl~--~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~-~G~ICLsiL~~~~g~~~ 181 (323)
T 3ceg_A 105 DEERLD--IMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYN-DGKVCLSILNTWHGRPE 181 (323)
T ss_dssp ESSCTT--EEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCT-TCBBCCGGGTSSCCCGG
T ss_pred cCCCcc--ccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCc-CCeEechhhccccCCCc
Confidence 567888 99999999999999999999999999999999999999998 99999996 99999999941 1
Q ss_pred CCCCCCC-CHHHHHHHHHHHhc--CCCCCCCCCCcc
Q 033234 73 ANWQREY-TMEDILTQLKKEMM--SPQNWKLAQPPE 105 (124)
Q Consensus 73 ~~W~p~~-~l~~il~~i~~~l~--~P~~~~~~~~~~ 105 (124)
+.|+|++ +|.+||++|+++|. +|+.++|.+.++
T Consensus 182 e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a 217 (323)
T 3ceg_A 182 EKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERS 217 (323)
T ss_dssp GSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGG
T ss_pred CCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHH
Confidence 6899999 89999999999996 788899988765
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.96 E-value=1.9e-30 Score=188.53 Aligned_cols=91 Identities=25% Similarity=0.353 Sum_probs=78.3
Q ss_pred CCCCCccceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCC-CCCCCCCCCH
Q 033234 3 DADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPM-LANWQREYTM 81 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~-~~~W~p~~~l 81 (124)
++||++ +|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||+++ +|+||+++|+. .+.|+|+++|
T Consensus 39 ~~~nl~--~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~-~G~ICL~iL~~~~~~W~P~~ti 113 (187)
T 2f4w_A 39 LPSNIL--EWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC-NTRLCLSITDFHPDTWNPAWSV 113 (187)
T ss_dssp ETTEEE--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT-TSCBC----------CCTTCCH
T ss_pred cCCccc--eeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc-CCeEeeeccccCccCCCCcCcH
Confidence 467788 99999999999999999999999999999999999999999 999997 99999999942 3799999999
Q ss_pred HHHHHHHHHHhcCCCCC
Q 033234 82 EDILTQLKKEMMSPQNW 98 (124)
Q Consensus 82 ~~il~~i~~~l~~P~~~ 98 (124)
.+||.+|+++|.+|++.
T Consensus 114 ~~vL~si~sll~~p~p~ 130 (187)
T 2f4w_A 114 STILTGLLSFMVEKGPT 130 (187)
T ss_dssp HHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 99999999999998876
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.96 E-value=3.6e-31 Score=192.20 Aligned_cols=95 Identities=17% Similarity=0.320 Sum_probs=86.9
Q ss_pred CCCCCccceEEEEEECC-CCCCCCC-----------CEEEEEEEeCCCCCCCCCCceeeeecccC-CccCCCCeeeccCC
Q 033234 3 DADDILMQSWTGTIIGP-PNTVHEG-----------RIYQLKLFCGTDYPDNPPSVRFQTRINMT-CVNQETGMVEPSLF 69 (124)
Q Consensus 3 ~~dd~~l~~W~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~yP~~pP~v~f~t~i~Hp-nv~~~~G~icl~~l 69 (124)
++||++ +|+++|.|| ++|||+| |.|+++|.||++||++||+|+|.|++||| ||+. +|.||+++|
T Consensus 55 ~~dnl~--~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~-~G~ICL~iL 131 (186)
T 1zuo_A 55 INDSLY--DWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLG-GGALCMELL 131 (186)
T ss_dssp ETTEEE--EEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCG-GGBBCCGGG
T ss_pred cCCccc--eeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCC-CCcEEeccC
Confidence 356787 999999997 9999998 89999999999999999999999999999 6996 999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC
Q 033234 70 PMLANWQREYTMEDILTQLKKEMMSPQNWKLA 101 (124)
Q Consensus 70 ~~~~~W~p~~~l~~il~~i~~~l~~P~~~~~~ 101 (124)
. .+.|+|+++|++||++|+++|.+|+.....
T Consensus 132 ~-~~~WsP~~ti~~VL~sI~slL~~p~a~~~~ 162 (186)
T 1zuo_A 132 T-KQGWSSAYSIESVIMQINATLVKGKARVQF 162 (186)
T ss_dssp S-TTTCCTTSCHHHHHHHHHHHHHHTTCEECT
T ss_pred C-CCCCCCcCcHHHHHHHHHHHHcCCChhHhh
Confidence 5 579999999999999999999998765443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.88 E-value=3.9e-24 Score=151.69 Aligned_cols=79 Identities=9% Similarity=0.123 Sum_probs=71.6
Q ss_pred CCCCccceEEEEEECCCCCCCCCC----------EEEEEEEeCCCCCCCCCCceeeee-cccCCccCCCCeeeccCCCCC
Q 033234 4 ADDILMQSWTGTIIGPPNTVHEGR----------IYQLKLFCGTDYPDNPPSVRFQTR-INMTCVNQETGMVEPSLFPML 72 (124)
Q Consensus 4 ~dd~~l~~W~~~i~Gp~~tpyegg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~Hpnv~~~~G~icl~~l~~~ 72 (124)
++|++ .|.+++.||+||+|+|| .|++++.||++||.+||+|+|.++ ++|||||. +|+|||++|. .
T Consensus 52 k~n~~--~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~-~G~ICLdIL~-k 127 (172)
T 2z6o_A 52 KNADN--DWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYR-GGKICLTDHF-K 127 (172)
T ss_dssp HHTTC--CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCT-TSBBCCCTTH-H
T ss_pred ccccc--eeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCC-CCcEechhhc-c
Confidence 45777 99999999999999999 999999999999999999999998 99999997 9999999984 3
Q ss_pred C---CCCCCCCHHHHHH
Q 033234 73 A---NWQREYTMEDILT 86 (124)
Q Consensus 73 ~---~W~p~~~l~~il~ 86 (124)
. .|+|.+++..+|.
T Consensus 128 p~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 128 PLWARNVPKFGLAHLMA 144 (172)
T ss_dssp HHHHHHTTSCCHHHHHH
T ss_pred ccccccCCccCHHHHHh
Confidence 3 4559999999973
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.78 E-value=1.6e-19 Score=128.15 Aligned_cols=85 Identities=14% Similarity=0.316 Sum_probs=75.0
Q ss_pred eEEEEEECCCCCCCCCCE---EEEEEEeCCCCCCCCCCceeee-------e---cc-cCCccCCCCeeeccCCCCCCCCC
Q 033234 11 SWTGTIIGPPNTVHEGRI---YQLKLFCGTDYPDNPPSVRFQT-------R---IN-MTCVNQETGMVEPSLFPMLANWQ 76 (124)
Q Consensus 11 ~W~~~i~Gp~~tpyegg~---f~~~i~fp~~yP~~pP~v~f~t-------~---i~-Hpnv~~~~G~icl~~l~~~~~W~ 76 (124)
++-+.+.|.-.++|+|+. |.+.|-||.+||++||.|.|.+ + |+ |||||. +|+||++.| ++|+
T Consensus 62 ~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~-~G~I~lpyL---~~W~ 137 (162)
T 3r3q_A 62 QLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDS-NGWIALPIL---HAWD 137 (162)
T ss_dssp EEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCT-TSBBCCGGG---GSCC
T ss_pred heEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCC-CCcEeCccc---ccCC
Confidence 566666676669999999 8899999999999999998865 1 77 999997 999999998 5799
Q ss_pred C-CCCHHHHHHHHHHHhcCCCCCC
Q 033234 77 R-EYTMEDILTQLKKEMMSPQNWK 99 (124)
Q Consensus 77 p-~~~l~~il~~i~~~l~~P~~~~ 99 (124)
+ +.++.++|++|+++|.+|++++
T Consensus 138 p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 138 PAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp GGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred CCcCcHHHHHHHHHHHhcCCCCCC
Confidence 9 6899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.62 E-value=7e-17 Score=112.57 Aligned_cols=63 Identities=14% Similarity=0.266 Sum_probs=58.3
Q ss_pred eEEEEEECCCCCCCCCC----------EEEEEEEeCCCCCCCCCCceeeee-cccCCccCCCCeeeccCCCCCCCCCCCC
Q 033234 11 SWTGTIIGPPNTVHEGR----------IYQLKLFCGTDYPDNPPSVRFQTR-INMTCVNQETGMVEPSLFPMLANWQREY 79 (124)
Q Consensus 11 ~W~~~i~Gp~~tpyegg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~Hpnv~~~~G~icl~~l~~~~~W~p~~ 79 (124)
.|...+.||+||+|+|+ .|++++.||.+||..||+|+|.+. ++|||++. +|+|||+++ |+|.+
T Consensus 59 dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr-~GkICLdIh-----wkPlW 132 (168)
T 3kpa_A 59 HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYR-GGKICMTTH-----FFPLW 132 (168)
T ss_dssp CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEET-TTEECCCTT-----HHHHH
T ss_pred CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccC-CCcEEeccc-----cchhh
Confidence 79999999999999999 999999999999999999999995 89999997 999999875 76654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.50 E-value=1.6e-14 Score=100.92 Aligned_cols=76 Identities=21% Similarity=0.357 Sum_probs=67.4
Q ss_pred ceEEEEEECCCCCCCCCCEEEE--EEEeCCCCCCCCCCceeeee------cccCCccCCCCeeeccCCCCCCCCCC-CCC
Q 033234 10 QSWTGTIIGPPNTVHEGRIYQL--KLFCGTDYPDNPPSVRFQTR------INMTCVNQETGMVEPSLFPMLANWQR-EYT 80 (124)
Q Consensus 10 ~~W~~~i~Gp~~tpyegg~f~~--~i~fp~~yP~~pP~v~f~t~------i~Hpnv~~~~G~icl~~l~~~~~W~p-~~~ 80 (124)
..|.++|. .+|+|+.|.+ .|-||++||++||.+ |.++ ..|+|||. +|+||++.| ++|++ ..+
T Consensus 54 L~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL---~~W~~~~sn 124 (146)
T 3obq_A 54 MNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYL---HEWKHPQSD 124 (146)
T ss_dssp EEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHH---HTCCTTTCC
T ss_pred EEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccc---cccCCCCCC
Confidence 39999998 6899999995 899999999999999 6655 48999997 999999998 45987 899
Q ss_pred HHHHHHHHHHHhcC
Q 033234 81 MEDILTQLKKEMMS 94 (124)
Q Consensus 81 l~~il~~i~~~l~~ 94 (124)
|.++++.+++.|.+
T Consensus 125 L~~ll~~l~~~F~~ 138 (146)
T 3obq_A 125 LLGLIQVMIVVFGD 138 (146)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999874
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.41 E-value=0.056 Score=35.55 Aligned_cols=40 Identities=25% Similarity=0.314 Sum_probs=28.2
Q ss_pred eEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeee
Q 033234 11 SWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQT 50 (124)
Q Consensus 11 ~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 50 (124)
.+.+.|..-.+..-+.-.+.+.+.+|.+||..||.+....
T Consensus 39 ~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 39 SFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp EEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred EEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 5666665322222234578899999999999999988655
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.41 E-value=0.17 Score=33.63 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=28.8
Q ss_pred eEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeee
Q 033234 11 SWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQT 50 (124)
Q Consensus 11 ~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 50 (124)
.+.+.|....+ .-..-.+.+.+.+|.+||..+|.|....
T Consensus 47 ~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 47 IFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred EEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 67788874322 1123478899999999999999998754
No 58
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.08 E-value=0.27 Score=32.25 Aligned_cols=38 Identities=11% Similarity=0.174 Sum_probs=27.6
Q ss_pred eEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceee
Q 033234 11 SWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQ 49 (124)
Q Consensus 11 ~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~ 49 (124)
.+.+.|.. .+..=..-.+.+.+.+|.+||..+|.|...
T Consensus 41 ~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 41 VFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp EEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 67777773 321111347899999999999999999765
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.53 E-value=0.32 Score=31.79 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=21.7
Q ss_pred CEEEEEEEeCCCCCCCCCCceeeee
Q 033234 27 RIYQLKLFCGTDYPDNPPSVRFQTR 51 (124)
Q Consensus 27 g~f~~~i~fp~~yP~~pP~v~f~t~ 51 (124)
-.+.+.|.+|.+||..+|.|.....
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4788999999999999999987763
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=92.08 E-value=0.52 Score=33.60 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=45.7
Q ss_pred ceEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCCceeeeecccCCccCCCCeeeccCCCCCCCCCCCCCHHHHHHHHH
Q 033234 10 QSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLK 89 (124)
Q Consensus 10 ~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~~G~icl~~l~~~~~W~p~~~l~~il~~i~ 89 (124)
+..++.+.... |....++|.++.+||.++|.+...-+. | + .-.|++..+|.+++.+++
T Consensus 26 ~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~-------------~--~~~w~~~ssL~~v~~qF~ 83 (186)
T 3zqs_A 26 STIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--P-------------F--CASWTPQSSLISIYSQFL 83 (186)
T ss_dssp SEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--C-------------C--CCCCCTTCCHHHHHHHHH
T ss_pred cEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--C-------------c--ccccCCCccHHHHHHHHH
Confidence 37777777433 788999999999999999977544332 1 1 247999999999998877
Q ss_pred HHh
Q 033234 90 KEM 92 (124)
Q Consensus 90 ~~l 92 (124)
..+
T Consensus 84 ~~L 86 (186)
T 3zqs_A 84 AAI 86 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=89.82 E-value=0.23 Score=32.81 Aligned_cols=39 Identities=18% Similarity=0.333 Sum_probs=26.7
Q ss_pred eEEEEEECCCC-CCC-CCCEEEEEEEeCCCCCCCCCCceeee
Q 033234 11 SWTGTIIGPPN-TVH-EGRIYQLKLFCGTDYPDNPPSVRFQT 50 (124)
Q Consensus 11 ~W~~~i~Gp~~-tpy-egg~f~~~i~fp~~yP~~pP~v~f~t 50 (124)
.+.+.|. +.+ +-- ..-.+.+.|.||.+||..+|.|....
T Consensus 46 ~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 46 EINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred EEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 5666665 322 100 12468899999999999999998743
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=87.66 E-value=0.45 Score=32.19 Aligned_cols=24 Identities=17% Similarity=0.416 Sum_probs=21.0
Q ss_pred CEEEEEEEeCCCCCCCCCCceeee
Q 033234 27 RIYQLKLFCGTDYPDNPPSVRFQT 50 (124)
Q Consensus 27 g~f~~~i~fp~~yP~~pP~v~f~t 50 (124)
-.+.+.+.+|.+||..+|.+....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 368899999999999999998665
No 63
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=84.80 E-value=0.71 Score=31.43 Aligned_cols=23 Identities=13% Similarity=0.076 Sum_probs=20.7
Q ss_pred EEEEEEEeCCCCCCCCCCceeee
Q 033234 28 IYQLKLFCGTDYPDNPPSVRFQT 50 (124)
Q Consensus 28 ~f~~~i~fp~~yP~~pP~v~f~t 50 (124)
.+.+.|.+|.+||..+|.|.-..
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998654
No 64
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=39.90 E-value=23 Score=25.28 Aligned_cols=26 Identities=8% Similarity=0.213 Sum_probs=23.0
Q ss_pred CCCEEEEEEEeCCCCCC-----CCCCceeee
Q 033234 25 EGRIYQLKLFCGTDYPD-----NPPSVRFQT 50 (124)
Q Consensus 25 egg~f~~~i~fp~~yP~-----~pP~v~f~t 50 (124)
+.|.|.|+-.+|--||. .||.|+|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46999999999999998 899999874
No 65
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=37.47 E-value=69 Score=21.50 Aligned_cols=42 Identities=7% Similarity=0.259 Sum_probs=30.2
Q ss_pred CCCccceEE--EEEECCCCCCCC-CCEEEEEEEeCCCCCCCCCCcee
Q 033234 5 DDILMQSWT--GTIIGPPNTVHE-GRIYQLKLFCGTDYPDNPPSVRF 48 (124)
Q Consensus 5 dd~~l~~W~--~~i~Gp~~tpye-gg~f~~~i~fp~~yP~~pP~v~f 48 (124)
++..+++|. +.+.|+.|.... .-+=++...+.+.|+. |...+
T Consensus 28 eg~~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v 72 (140)
T 3qrl_A 28 ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTF 72 (140)
T ss_dssp TTBCCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEE
T ss_pred CCCcccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEE
Confidence 345567998 899999988664 4566688888888873 54433
No 66
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=31.95 E-value=21 Score=16.59 Aligned_cols=17 Identities=24% Similarity=0.200 Sum_probs=10.9
Q ss_pred CCCCCCceeeeecccCC
Q 033234 40 PDNPPSVRFQTRINMTC 56 (124)
Q Consensus 40 P~~pP~v~f~t~i~Hpn 56 (124)
|..-|.-.|...-|||-
T Consensus 4 pmtlpenyfserpyhpp 20 (26)
T 2jrw_A 4 PMTLPENYFSERPYHPP 20 (26)
T ss_dssp CCCCSSSSCCSSSCCSC
T ss_pred ccccchhhcccCCCCCC
Confidence 45556666777777763
No 67
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=26.26 E-value=1.4e+02 Score=20.75 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=25.9
Q ss_pred cceEEEEEECCCCCCCCCCEEEEEEEeCCCCCC
Q 033234 9 MQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPD 41 (124)
Q Consensus 9 l~~W~~~i~Gp~~tpyegg~f~~~i~fp~~yP~ 41 (124)
.++|.+.+.|+.+.-...-+=++.+.+.+.||.
T Consensus 32 TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n 64 (175)
T 3rls_A 32 THLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN 64 (175)
T ss_dssp CEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS
T ss_pred cEEEEEEEECCCCCChhheEEEEEEEcCCCCCC
Confidence 369999999987765555566788889999974
No 68
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=22.42 E-value=34 Score=25.03 Aligned_cols=26 Identities=19% Similarity=0.433 Sum_probs=22.4
Q ss_pred CCCEEEEEEEeCCCCC-------CCCCCceeee
Q 033234 25 EGRIYQLKLFCGTDYP-------DNPPSVRFQT 50 (124)
Q Consensus 25 egg~f~~~i~fp~~yP-------~~pP~v~f~t 50 (124)
+.|.|.|+-.+|--|| ..||.|+|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 4699999999999998 4799998874
No 69
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=21.23 E-value=49 Score=23.41 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=21.4
Q ss_pred CEEEEEEEeCCCCCCC-----CCCceeee
Q 033234 27 RIYQLKLFCGTDYPDN-----PPSVRFQT 50 (124)
Q Consensus 27 g~f~~~i~fp~~yP~~-----pP~v~f~t 50 (124)
|.|.|+-.+|--||.. ||.|+|.-
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~V 130 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINISL 130 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEEE
Confidence 8999999999999987 88888873
No 70
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=20.26 E-value=40 Score=25.40 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=22.1
Q ss_pred CCCEEEEEEEeCCCCC------------------CCCCCceeee
Q 033234 25 EGRIYQLKLFCGTDYP------------------DNPPSVRFQT 50 (124)
Q Consensus 25 egg~f~~~i~fp~~yP------------------~~pP~v~f~t 50 (124)
+.|.|.|+-.+|--|| ..||.|+|.-
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 226 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMV 226 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEEE
Confidence 4699999999999998 4589998873
No 71
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=20.25 E-value=40 Score=25.64 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=21.9
Q ss_pred CCCEEEEEEEeCCCCC------------------CCCCCceeee
Q 033234 25 EGRIYQLKLFCGTDYP------------------DNPPSVRFQT 50 (124)
Q Consensus 25 egg~f~~~i~fp~~yP------------------~~pP~v~f~t 50 (124)
+.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~V 230 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFV 230 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEEE
Confidence 4699999999999998 5688888873
No 72
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=20.22 E-value=39 Score=25.64 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=24.2
Q ss_pred CCCEEEEEEEeCCCCC------------------CCCCCceeeeecccCCc
Q 033234 25 EGRIYQLKLFCGTDYP------------------DNPPSVRFQTRINMTCV 57 (124)
Q Consensus 25 egg~f~~~i~fp~~yP------------------~~pP~v~f~t~i~Hpnv 57 (124)
+.|.|.|+-.+|--|| ..||.|+|. ++++..
T Consensus 183 ~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~--V~a~G~ 231 (311)
T 2azq_A 183 AEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF--ISAFGH 231 (311)
T ss_dssp TTCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE--EECTTB
T ss_pred CCceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE--EEcCCc
Confidence 3599999999999998 568999986 344443
Done!