Query 033236
Match_columns 124
No_of_seqs 111 out of 1142
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 11:28:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033236.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033236hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1502 Flavonol reductase/cin 99.9 4E-24 8.7E-29 146.7 11.8 116 3-120 6-132 (327)
2 COG1087 GalE UDP-glucose 4-epi 99.9 6E-23 1.3E-27 138.7 10.2 110 4-121 1-122 (329)
3 PF01073 3Beta_HSD: 3-beta hyd 99.9 2.2E-22 4.8E-27 137.7 9.4 109 7-122 1-121 (280)
4 PRK15181 Vi polysaccharide bio 99.9 2E-21 4.3E-26 136.5 12.4 119 2-121 14-145 (348)
5 CHL00194 ycf39 Ycf39; Provisio 99.9 6.4E-21 1.4E-25 132.5 12.4 106 4-118 1-111 (317)
6 PLN02214 cinnamoyl-CoA reducta 99.8 2.7E-20 5.9E-25 130.6 12.7 115 3-119 10-129 (342)
7 PLN00198 anthocyanidin reducta 99.8 3.8E-20 8.3E-25 129.4 12.4 120 1-122 7-136 (338)
8 PLN02662 cinnamyl-alcohol dehy 99.8 3.6E-20 7.9E-25 128.5 11.9 114 3-119 4-129 (322)
9 PLN02986 cinnamyl-alcohol dehy 99.8 5.3E-20 1.2E-24 127.9 12.6 115 3-120 5-131 (322)
10 PLN02650 dihydroflavonol-4-red 99.8 7.3E-20 1.6E-24 128.6 12.3 118 2-121 4-132 (351)
11 KOG1371 UDP-glucose 4-epimeras 99.8 1E-19 2.2E-24 124.1 12.5 118 3-122 2-133 (343)
12 TIGR03589 PseB UDP-N-acetylglu 99.8 1.7E-19 3.6E-24 125.8 12.8 115 1-120 2-128 (324)
13 TIGR01472 gmd GDP-mannose 4,6- 99.8 1.9E-19 4.1E-24 126.2 12.0 117 4-121 1-136 (343)
14 PLN02989 cinnamyl-alcohol dehy 99.8 2.7E-19 5.8E-24 124.5 12.5 117 3-121 5-133 (325)
15 PLN02657 3,8-divinyl protochlo 99.8 2.5E-19 5.5E-24 127.7 12.3 119 2-121 59-186 (390)
16 PLN02427 UDP-apiose/xylose syn 99.8 1.9E-19 4.2E-24 128.0 11.2 112 3-121 14-140 (386)
17 PLN02572 UDP-sulfoquinovose sy 99.8 4.1E-19 8.8E-24 128.4 12.5 119 2-121 46-195 (442)
18 PF13460 NAD_binding_10: NADH( 99.8 7.9E-19 1.7E-23 113.1 12.6 102 6-121 1-102 (183)
19 PLN02695 GDP-D-mannose-3',5'-e 99.8 4.3E-19 9.3E-24 125.8 11.4 110 3-121 21-141 (370)
20 PLN03209 translocon at the inn 99.8 7.7E-19 1.7E-23 128.7 13.0 117 2-120 79-211 (576)
21 PLN02896 cinnamyl-alcohol dehy 99.8 1.3E-18 2.9E-23 122.4 13.5 116 3-122 10-143 (353)
22 PLN02240 UDP-glucose 4-epimera 99.8 9.5E-19 2E-23 122.8 12.5 119 1-121 3-136 (352)
23 PLN02583 cinnamoyl-CoA reducta 99.8 1.8E-18 3.9E-23 119.3 12.7 116 3-120 6-131 (297)
24 TIGR03466 HpnA hopanoid-associ 99.8 6.7E-19 1.5E-23 122.2 10.6 109 4-121 1-117 (328)
25 TIGR02622 CDP_4_6_dhtase CDP-g 99.8 1.4E-18 3.1E-23 122.1 11.8 118 1-121 2-131 (349)
26 PRK11908 NAD-dependent epimera 99.8 1.6E-18 3.5E-23 121.7 11.5 109 4-121 2-122 (347)
27 PLN02686 cinnamoyl-CoA reducta 99.8 2.7E-18 5.9E-23 121.6 12.4 115 1-118 51-181 (367)
28 PLN02653 GDP-mannose 4,6-dehyd 99.8 1.6E-18 3.4E-23 121.4 10.9 119 2-121 5-143 (340)
29 PRK10675 UDP-galactose-4-epime 99.8 4.2E-18 9E-23 119.0 12.0 116 4-121 1-128 (338)
30 COG0300 DltE Short-chain dehyd 99.8 4.4E-18 9.5E-23 114.7 10.9 117 1-122 4-148 (265)
31 PRK06182 short chain dehydroge 99.8 7.8E-18 1.7E-22 114.6 11.6 110 1-119 1-135 (273)
32 PRK06180 short chain dehydroge 99.8 1.3E-17 2.8E-22 113.9 12.7 113 2-120 3-140 (277)
33 PRK08125 bifunctional UDP-gluc 99.8 6.1E-18 1.3E-22 127.4 11.9 110 3-121 315-436 (660)
34 PF01370 Epimerase: NAD depend 99.8 7.2E-18 1.6E-22 112.1 10.9 108 6-121 1-120 (236)
35 KOG1205 Predicted dehydrogenas 99.8 8.9E-18 1.9E-22 114.0 11.2 121 1-122 10-155 (282)
36 KOG1430 C-3 sterol dehydrogena 99.8 6.5E-18 1.4E-22 118.1 10.6 117 2-122 3-131 (361)
37 PLN00141 Tic62-NAD(P)-related 99.8 2.7E-17 5.8E-22 111.0 13.3 111 3-120 17-135 (251)
38 COG0451 WcaG Nucleoside-diphos 99.8 7.8E-18 1.7E-22 116.1 10.4 108 4-121 1-120 (314)
39 PF02719 Polysacc_synt_2: Poly 99.8 1.6E-18 3.5E-23 118.1 6.8 112 6-118 1-129 (293)
40 PF05368 NmrA: NmrA-like famil 99.8 3E-17 6.6E-22 109.5 12.2 107 6-121 1-107 (233)
41 PRK06482 short chain dehydroge 99.8 4.6E-17 1E-21 110.9 13.0 111 3-119 2-137 (276)
42 PRK10217 dTDP-glucose 4,6-dehy 99.8 2.2E-17 4.8E-22 116.1 11.7 114 4-121 2-138 (355)
43 PLN02260 probable rhamnose bio 99.7 2.3E-17 5E-22 124.5 12.1 117 3-121 6-136 (668)
44 PRK06194 hypothetical protein; 99.7 6.1E-17 1.3E-21 110.8 13.2 116 2-121 5-152 (287)
45 PRK12429 3-hydroxybutyrate deh 99.7 6.9E-17 1.5E-21 108.7 13.1 116 1-121 2-144 (258)
46 PRK09987 dTDP-4-dehydrorhamnos 99.7 1.3E-17 2.8E-22 115.2 9.6 96 4-121 1-108 (299)
47 PRK05993 short chain dehydroge 99.7 2.6E-17 5.7E-22 112.4 11.1 109 3-120 4-138 (277)
48 PRK06197 short chain dehydroge 99.7 3.6E-17 7.7E-22 113.1 11.3 116 2-119 15-154 (306)
49 PRK13394 3-hydroxybutyrate deh 99.7 3.5E-17 7.6E-22 110.5 10.9 115 2-119 6-146 (262)
50 PRK10084 dTDP-glucose 4,6 dehy 99.7 4.7E-17 1E-21 114.3 11.9 116 4-121 1-137 (352)
51 PRK07806 short chain dehydroge 99.7 1.3E-16 2.8E-21 107.1 13.4 117 1-118 4-136 (248)
52 PRK08263 short chain dehydroge 99.7 7E-17 1.5E-21 110.1 12.2 114 1-120 1-139 (275)
53 TIGR01181 dTDP_gluc_dehyt dTDP 99.7 4.8E-17 1E-21 112.3 11.4 115 5-121 1-129 (317)
54 PLN02206 UDP-glucuronate decar 99.7 3.8E-17 8.3E-22 118.1 11.0 109 3-121 119-237 (442)
55 PRK09186 flagellin modificatio 99.7 7.3E-17 1.6E-21 108.6 11.6 118 1-119 2-147 (256)
56 COG4221 Short-chain alcohol de 99.7 1.1E-16 2.3E-21 106.0 12.0 115 3-122 6-145 (246)
57 PRK06179 short chain dehydroge 99.7 4.9E-17 1.1E-21 110.4 10.6 107 3-120 4-135 (270)
58 PRK07201 short chain dehydroge 99.7 6.8E-17 1.5E-21 121.5 12.2 114 4-121 1-129 (657)
59 PLN02996 fatty acyl-CoA reduct 99.7 1.1E-16 2.4E-21 117.0 12.8 120 2-121 10-165 (491)
60 COG1086 Predicted nucleoside-d 99.7 5.3E-17 1.1E-21 117.8 10.4 116 2-118 249-377 (588)
61 PRK05653 fabG 3-ketoacyl-(acyl 99.7 1.6E-16 3.4E-21 106.1 11.9 114 1-119 3-143 (246)
62 PRK05865 hypothetical protein; 99.7 9.9E-17 2.1E-21 122.6 12.1 103 4-118 1-104 (854)
63 PRK12826 3-ketoacyl-(acyl-carr 99.7 2.4E-16 5.1E-21 105.7 12.4 115 1-120 4-145 (251)
64 PLN02166 dTDP-glucose 4,6-dehy 99.7 1.1E-16 2.4E-21 115.5 11.2 109 3-121 120-238 (436)
65 PRK12825 fabG 3-ketoacyl-(acyl 99.7 2.3E-16 5E-21 105.3 12.0 119 1-121 4-147 (249)
66 PRK06914 short chain dehydroge 99.7 1.4E-16 3E-21 108.8 11.1 116 1-119 1-142 (280)
67 PRK12828 short chain dehydroge 99.7 2.8E-16 6E-21 104.6 12.3 113 3-120 7-144 (239)
68 TIGR03649 ergot_EASG ergot alk 99.7 1.3E-16 2.8E-21 109.3 10.9 100 5-119 1-107 (285)
69 PF07993 NAD_binding_4: Male s 99.7 5E-17 1.1E-21 109.7 8.7 110 8-118 1-136 (249)
70 PRK06128 oxidoreductase; Provi 99.7 2.7E-16 5.9E-21 108.6 12.4 119 2-121 54-196 (300)
71 PRK12827 short chain dehydroge 99.7 3.8E-16 8.3E-21 104.5 12.8 119 2-121 5-151 (249)
72 PRK07231 fabG 3-ketoacyl-(acyl 99.7 1.5E-16 3.3E-21 106.7 10.8 115 2-121 4-145 (251)
73 PRK07063 short chain dehydroge 99.7 2.4E-16 5.2E-21 106.5 11.6 114 2-120 6-148 (260)
74 PRK05854 short chain dehydroge 99.7 1.6E-16 3.5E-21 110.4 10.9 117 1-119 12-152 (313)
75 PRK05876 short chain dehydroge 99.7 2.8E-16 6E-21 107.4 11.7 117 1-121 4-147 (275)
76 PRK07523 gluconate 5-dehydroge 99.7 3.5E-16 7.5E-21 105.5 12.0 113 2-119 9-148 (255)
77 PRK07326 short chain dehydroge 99.7 6.8E-16 1.5E-20 102.9 13.3 112 3-119 6-142 (237)
78 PRK07774 short chain dehydroge 99.7 4.4E-16 9.5E-21 104.5 12.4 116 2-121 5-149 (250)
79 PRK08219 short chain dehydroge 99.7 3.5E-16 7.5E-21 103.5 11.7 111 1-120 1-132 (227)
80 PRK07890 short chain dehydroge 99.7 3.3E-16 7.2E-21 105.6 11.8 116 1-120 3-144 (258)
81 PRK12829 short chain dehydroge 99.7 5.7E-16 1.2E-20 104.7 12.7 114 1-119 9-149 (264)
82 PRK07453 protochlorophyllide o 99.7 4.2E-16 9E-21 108.6 12.3 114 2-119 5-147 (322)
83 PRK08213 gluconate 5-dehydroge 99.7 5.1E-16 1.1E-20 104.9 12.4 113 2-119 11-151 (259)
84 PRK07825 short chain dehydroge 99.7 4.7E-16 1E-20 105.8 12.2 113 1-120 3-140 (273)
85 PRK07024 short chain dehydroge 99.7 4.6E-16 1E-20 105.1 11.8 112 3-119 2-140 (257)
86 PRK10538 malonic semialdehyde 99.7 8.3E-16 1.8E-20 103.4 12.9 110 4-119 1-136 (248)
87 PRK05866 short chain dehydroge 99.7 4.9E-16 1.1E-20 107.1 12.1 113 2-119 39-180 (293)
88 PRK08251 short chain dehydroge 99.7 4.5E-16 9.7E-21 104.4 11.5 117 2-119 1-142 (248)
89 PRK06138 short chain dehydroge 99.7 3.6E-16 7.8E-21 105.0 10.9 113 2-119 4-142 (252)
90 PRK07814 short chain dehydroge 99.7 8.8E-16 1.9E-20 104.1 12.9 114 1-119 8-149 (263)
91 COG1088 RfbB dTDP-D-glucose 4, 99.7 4.2E-16 9.1E-21 105.5 11.1 116 4-121 1-130 (340)
92 PRK05717 oxidoreductase; Valid 99.7 5.3E-16 1.1E-20 104.6 11.8 114 2-120 9-147 (255)
93 PRK08063 enoyl-(acyl carrier p 99.7 6.2E-16 1.4E-20 103.8 12.0 117 1-119 2-143 (250)
94 PRK08267 short chain dehydroge 99.7 4.6E-16 9.9E-21 105.2 11.4 111 4-119 2-138 (260)
95 PRK12320 hypothetical protein; 99.7 3.6E-16 7.9E-21 117.4 11.8 101 4-118 1-103 (699)
96 PLN02503 fatty acyl-CoA reduct 99.7 4.5E-16 9.8E-21 115.6 12.2 120 2-121 118-272 (605)
97 TIGR03206 benzo_BadH 2-hydroxy 99.7 6.6E-16 1.4E-20 103.6 11.9 116 1-121 1-143 (250)
98 PLN02253 xanthoxin dehydrogena 99.7 9.6E-16 2.1E-20 104.7 12.9 115 1-119 16-157 (280)
99 TIGR01179 galE UDP-glucose-4-e 99.7 5E-16 1.1E-20 107.5 11.6 113 5-121 1-125 (328)
100 PRK12481 2-deoxy-D-gluconate 3 99.7 6E-16 1.3E-20 104.4 11.6 116 1-120 6-146 (251)
101 PLN00016 RNA-binding protein; 99.7 2.8E-16 6E-21 111.7 10.4 109 3-121 52-169 (378)
102 PRK06196 oxidoreductase; Provi 99.7 6.6E-16 1.4E-20 107.3 12.1 111 2-119 25-158 (315)
103 PRK06398 aldose dehydrogenase; 99.7 7.4E-16 1.6E-20 104.3 12.0 106 2-121 5-135 (258)
104 PRK08265 short chain dehydroge 99.7 8E-16 1.7E-20 104.2 12.1 113 2-119 5-139 (261)
105 PRK09291 short chain dehydroge 99.7 5.1E-16 1.1E-20 104.6 11.1 114 3-119 2-134 (257)
106 TIGR01832 kduD 2-deoxy-D-gluco 99.7 8.8E-16 1.9E-20 103.0 12.2 117 1-121 3-144 (248)
107 PRK05875 short chain dehydroge 99.7 3.4E-16 7.4E-21 106.6 10.3 119 1-120 5-149 (276)
108 PRK12745 3-ketoacyl-(acyl-carr 99.7 1.1E-15 2.4E-20 102.9 12.7 118 2-120 1-150 (256)
109 PRK05557 fabG 3-ketoacyl-(acyl 99.7 1.1E-15 2.3E-20 102.1 12.5 116 2-119 4-144 (248)
110 TIGR01746 Thioester-redct thio 99.7 4.9E-16 1.1E-20 109.0 11.1 116 5-121 1-140 (367)
111 PRK12939 short chain dehydroge 99.7 1.1E-15 2.4E-20 102.4 12.3 115 2-120 6-146 (250)
112 PRK06841 short chain dehydroge 99.7 1.5E-15 3.2E-20 102.3 12.9 112 2-119 14-150 (255)
113 PRK07904 short chain dehydroge 99.7 1.1E-15 2.3E-20 103.4 12.1 116 3-119 8-148 (253)
114 PRK07062 short chain dehydroge 99.7 7.5E-16 1.6E-20 104.4 11.3 117 3-120 8-149 (265)
115 PRK07985 oxidoreductase; Provi 99.7 1.2E-15 2.6E-20 105.2 12.3 120 2-121 48-190 (294)
116 TIGR03325 BphB_TodD cis-2,3-di 99.7 9E-16 1.9E-20 103.9 11.6 114 2-120 4-145 (262)
117 PRK07478 short chain dehydroge 99.7 7.2E-16 1.6E-20 103.9 10.8 115 3-120 6-146 (254)
118 PRK06200 2,3-dihydroxy-2,3-dih 99.7 1.4E-15 3.1E-20 103.0 12.3 115 2-121 5-147 (263)
119 PRK07856 short chain dehydroge 99.7 1E-15 2.2E-20 103.1 11.4 109 2-120 5-138 (252)
120 COG3320 Putative dehydrogenase 99.7 6.4E-16 1.4E-20 107.7 10.7 117 4-121 1-139 (382)
121 PRK07074 short chain dehydroge 99.7 2.2E-15 4.8E-20 101.6 13.1 113 2-119 1-138 (257)
122 PRK09242 tropinone reductase; 99.7 9.4E-16 2E-20 103.5 11.2 119 1-120 7-150 (257)
123 PRK07666 fabG 3-ketoacyl-(acyl 99.7 1.9E-15 4.2E-20 100.9 12.6 114 3-119 7-145 (239)
124 PRK07067 sorbitol dehydrogenas 99.7 1.3E-15 2.9E-20 102.8 11.8 112 3-119 6-142 (257)
125 PRK06114 short chain dehydroge 99.7 1.4E-15 3E-20 102.6 11.8 118 1-120 6-148 (254)
126 PRK12746 short chain dehydroge 99.7 2.2E-15 4.8E-20 101.4 12.7 115 2-120 5-150 (254)
127 PRK06463 fabG 3-ketoacyl-(acyl 99.7 1.8E-15 4E-20 102.0 12.2 110 2-119 6-140 (255)
128 PRK08264 short chain dehydroge 99.7 1.3E-15 2.9E-20 101.6 11.4 109 3-121 6-137 (238)
129 PRK06701 short chain dehydroge 99.7 2.5E-15 5.5E-20 103.4 13.0 119 2-121 45-186 (290)
130 PRK12823 benD 1,6-dihydroxycyc 99.7 2.6E-15 5.7E-20 101.4 12.8 116 1-120 6-147 (260)
131 PRK08643 acetoin reductase; Va 99.7 2.9E-15 6.3E-20 101.0 12.7 115 2-120 1-142 (256)
132 PRK12936 3-ketoacyl-(acyl-carr 99.7 2.2E-15 4.8E-20 100.7 12.1 112 2-119 5-141 (245)
133 PRK08339 short chain dehydroge 99.7 4.4E-15 9.6E-20 100.8 13.5 117 2-120 7-147 (263)
134 PRK05693 short chain dehydroge 99.7 1.3E-15 2.8E-20 103.8 10.9 108 4-120 2-133 (274)
135 PRK09135 pteridine reductase; 99.7 2.5E-15 5.4E-20 100.6 11.9 115 3-117 6-143 (249)
136 PRK07102 short chain dehydroge 99.7 1.2E-15 2.5E-20 102.3 10.3 115 3-119 1-137 (243)
137 PRK06500 short chain dehydroge 99.7 2.9E-15 6.3E-20 100.4 12.0 111 2-118 5-138 (249)
138 PRK07775 short chain dehydroge 99.7 2.8E-15 6.1E-20 102.3 12.0 114 2-120 9-149 (274)
139 TIGR01963 PHB_DH 3-hydroxybuty 99.7 3.6E-15 7.8E-20 100.2 12.4 112 3-119 1-139 (255)
140 PRK07454 short chain dehydroge 99.7 2.4E-15 5.3E-20 100.6 11.5 113 3-120 6-145 (241)
141 PRK07109 short chain dehydroge 99.7 4.4E-15 9.5E-20 104.1 13.2 114 3-121 8-148 (334)
142 PRK12935 acetoacetyl-CoA reduc 99.7 2.4E-15 5.1E-20 100.9 11.4 115 1-119 4-145 (247)
143 PRK08416 7-alpha-hydroxysteroi 99.7 2.5E-15 5.5E-20 101.7 11.4 119 1-120 6-155 (260)
144 PRK08085 gluconate 5-dehydroge 99.7 3.6E-15 7.7E-20 100.5 12.0 113 2-119 8-147 (254)
145 PRK06935 2-deoxy-D-gluconate 3 99.7 4.3E-15 9.2E-20 100.4 12.4 115 2-120 14-153 (258)
146 PRK08589 short chain dehydroge 99.7 1.9E-15 4.1E-20 103.0 10.7 117 2-121 5-145 (272)
147 PRK08642 fabG 3-ketoacyl-(acyl 99.7 4.7E-15 1E-19 99.6 12.3 112 3-119 5-148 (253)
148 PRK05565 fabG 3-ketoacyl-(acyl 99.7 2.4E-15 5.3E-20 100.5 10.9 114 1-119 3-144 (247)
149 PRK08628 short chain dehydroge 99.7 4.4E-15 9.5E-20 100.2 12.2 115 1-119 5-142 (258)
150 TIGR01214 rmlD dTDP-4-dehydror 99.7 1E-15 2.2E-20 104.7 9.2 92 5-121 1-104 (287)
151 PRK06124 gluconate 5-dehydroge 99.6 4.7E-15 1E-19 100.0 12.1 113 2-119 10-149 (256)
152 PRK05867 short chain dehydroge 99.6 2.9E-15 6.3E-20 100.9 11.1 114 2-119 8-148 (253)
153 PRK12384 sorbitol-6-phosphate 99.6 3.7E-15 8E-20 100.6 11.6 117 2-119 1-143 (259)
154 PRK06523 short chain dehydroge 99.6 3.4E-15 7.5E-20 100.8 11.3 107 2-120 8-141 (260)
155 PRK08277 D-mannonate oxidoredu 99.6 4.6E-15 9.9E-20 101.2 12.0 115 2-121 9-165 (278)
156 PRK12824 acetoacetyl-CoA reduc 99.6 5E-15 1.1E-19 99.0 11.9 114 3-120 2-142 (245)
157 PRK12743 oxidoreductase; Provi 99.6 3.9E-15 8.4E-20 100.5 11.3 117 2-119 1-142 (256)
158 PRK05650 short chain dehydroge 99.6 3.4E-15 7.5E-20 101.5 11.0 112 4-120 1-139 (270)
159 PRK12938 acetyacetyl-CoA reduc 99.6 7.5E-15 1.6E-19 98.4 12.5 115 1-119 1-142 (246)
160 PRK05872 short chain dehydroge 99.6 3.6E-15 7.9E-20 102.8 11.2 116 2-121 8-147 (296)
161 PRK12937 short chain dehydroge 99.6 5.9E-15 1.3E-19 98.7 11.9 117 2-119 4-142 (245)
162 PRK08226 short chain dehydroge 99.6 6.7E-15 1.4E-19 99.6 12.2 114 2-119 5-143 (263)
163 PRK07097 gluconate 5-dehydroge 99.6 7.1E-15 1.5E-19 99.7 12.2 114 1-119 8-148 (265)
164 PRK07577 short chain dehydroge 99.6 6.5E-15 1.4E-19 98.0 11.7 105 1-119 1-129 (234)
165 PRK06171 sorbitol-6-phosphate 99.6 5.9E-15 1.3E-19 100.0 11.6 109 1-120 7-148 (266)
166 PRK08993 2-deoxy-D-gluconate 3 99.6 1.1E-14 2.4E-19 98.2 12.9 115 2-120 9-148 (253)
167 PRK12747 short chain dehydroge 99.6 5.9E-15 1.3E-19 99.3 11.5 120 1-121 2-149 (252)
168 PRK09072 short chain dehydroge 99.6 6.3E-15 1.4E-19 99.8 11.7 114 2-120 4-142 (263)
169 PRK06172 short chain dehydroge 99.6 6.1E-15 1.3E-19 99.3 11.5 115 3-120 7-147 (253)
170 PRK07023 short chain dehydroge 99.6 7E-15 1.5E-19 98.5 11.7 109 4-120 2-140 (243)
171 PRK07060 short chain dehydroge 99.6 3.1E-15 6.7E-20 100.1 9.9 112 2-120 8-140 (245)
172 PRK06139 short chain dehydroge 99.6 7.6E-15 1.6E-19 102.8 12.2 113 3-120 7-146 (330)
173 PRK11150 rfaD ADP-L-glycero-D- 99.6 5.9E-16 1.3E-20 107.0 6.5 102 6-121 2-120 (308)
174 KOG1208 Dehydrogenases with di 99.6 4.5E-15 9.8E-20 102.9 10.9 117 2-119 34-173 (314)
175 PRK06077 fabG 3-ketoacyl-(acyl 99.6 8E-15 1.7E-19 98.5 11.7 118 3-121 6-145 (252)
176 PRK06057 short chain dehydroge 99.6 8.5E-15 1.8E-19 98.8 11.8 111 1-119 5-142 (255)
177 PRK06947 glucose-1-dehydrogena 99.6 6.1E-15 1.3E-19 98.9 11.1 116 3-119 2-145 (248)
178 PRK07576 short chain dehydroge 99.6 4.8E-15 1E-19 100.6 10.6 113 3-119 9-146 (264)
179 PLN02725 GDP-4-keto-6-deoxyman 99.6 1.5E-15 3.2E-20 104.6 8.1 92 7-121 1-105 (306)
180 PF00106 adh_short: short chai 99.6 4.5E-15 9.7E-20 94.1 9.5 115 4-121 1-139 (167)
181 PRK07035 short chain dehydroge 99.6 1.2E-14 2.6E-19 97.8 12.0 114 1-119 6-147 (252)
182 PRK08220 2,3-dihydroxybenzoate 99.6 1.1E-14 2.4E-19 97.9 11.7 106 2-119 7-137 (252)
183 PRK06113 7-alpha-hydroxysteroi 99.6 1.5E-14 3.2E-19 97.6 12.3 117 1-120 9-149 (255)
184 PRK06079 enoyl-(acyl carrier p 99.6 1.8E-14 4E-19 97.2 12.6 114 1-119 5-146 (252)
185 PRK07792 fabG 3-ketoacyl-(acyl 99.6 8.9E-15 1.9E-19 101.4 11.3 118 2-120 11-158 (306)
186 PRK05855 short chain dehydroge 99.6 6.2E-15 1.3E-19 109.1 10.9 116 2-121 314-456 (582)
187 PRK06181 short chain dehydroge 99.6 2.1E-14 4.6E-19 97.1 12.7 115 3-120 1-140 (263)
188 PRK06101 short chain dehydroge 99.6 1.8E-14 3.9E-19 96.5 12.2 110 4-119 2-130 (240)
189 TIGR02197 heptose_epim ADP-L-g 99.6 3.8E-15 8.2E-20 103.0 9.1 105 6-121 1-118 (314)
190 PRK12748 3-ketoacyl-(acyl-carr 99.6 1.9E-14 4.2E-19 97.1 12.4 120 1-120 3-157 (256)
191 PRK07069 short chain dehydroge 99.6 8.8E-15 1.9E-19 98.2 10.6 116 5-121 1-142 (251)
192 PRK12742 oxidoreductase; Provi 99.6 2E-14 4.4E-19 95.8 12.2 112 2-119 5-134 (237)
193 PRK07677 short chain dehydroge 99.6 1.7E-14 3.8E-19 97.1 11.9 116 3-120 1-141 (252)
194 PRK08278 short chain dehydroge 99.6 2.7E-14 5.9E-19 97.4 13.0 116 3-118 6-150 (273)
195 PRK12367 short chain dehydroge 99.6 2E-14 4.3E-19 96.9 12.0 98 1-105 12-120 (245)
196 PRK09134 short chain dehydroge 99.6 1.3E-14 2.8E-19 98.1 11.1 115 3-118 9-147 (258)
197 PRK06924 short chain dehydroge 99.6 1.7E-14 3.7E-19 96.9 11.6 112 4-119 2-143 (251)
198 PRK08017 oxidoreductase; Provi 99.6 1.2E-14 2.5E-19 98.0 10.8 108 3-119 2-135 (256)
199 PRK06123 short chain dehydroge 99.6 1.5E-14 3.2E-19 97.0 11.2 117 2-119 1-145 (248)
200 PRK06949 short chain dehydroge 99.6 2.3E-14 4.9E-19 96.6 12.1 116 1-120 7-156 (258)
201 PRK09730 putative NAD(P)-bindi 99.6 1.2E-14 2.6E-19 97.2 10.6 114 4-119 2-144 (247)
202 PRK12744 short chain dehydroge 99.6 3.7E-14 8.1E-19 95.7 12.9 113 3-115 8-144 (257)
203 PF04321 RmlD_sub_bind: RmlD s 99.6 3E-15 6.5E-20 102.9 7.5 93 4-121 1-105 (286)
204 PRK07791 short chain dehydroge 99.6 1.4E-14 3.1E-19 99.5 10.8 118 2-119 5-159 (286)
205 PRK08936 glucose-1-dehydrogena 99.6 3.3E-14 7.1E-19 96.2 12.4 119 1-120 5-148 (261)
206 PRK07424 bifunctional sterol d 99.6 2E-14 4.4E-19 102.8 11.4 99 2-105 177-286 (406)
207 TIGR01289 LPOR light-dependent 99.6 3.5E-14 7.7E-19 98.7 12.1 115 2-120 2-146 (314)
208 PLN02778 3,5-epimerase/4-reduc 99.6 1.4E-14 3.1E-19 100.1 9.9 88 3-117 9-111 (298)
209 KOG1201 Hydroxysteroid 17-beta 99.6 2.9E-14 6.3E-19 96.8 10.9 117 2-122 37-178 (300)
210 PRK07201 short chain dehydroge 99.6 1.7E-14 3.6E-19 108.7 10.8 116 1-121 369-513 (657)
211 PRK06483 dihydromonapterin red 99.6 3.9E-14 8.5E-19 94.5 11.5 111 2-119 1-137 (236)
212 PRK06125 short chain dehydroge 99.6 6E-14 1.3E-18 94.8 12.4 116 2-119 6-142 (259)
213 PRK07831 short chain dehydroge 99.6 4.1E-14 8.8E-19 95.8 11.5 118 1-119 15-159 (262)
214 TIGR01830 3oxo_ACP_reduc 3-oxo 99.6 2.9E-14 6.4E-19 94.9 10.5 112 6-119 1-137 (239)
215 PRK07041 short chain dehydroge 99.6 2.9E-14 6.3E-19 94.7 10.4 110 7-121 1-128 (230)
216 PRK06198 short chain dehydroge 99.6 2.2E-14 4.7E-19 96.9 9.9 118 1-120 4-147 (260)
217 PRK06484 short chain dehydroge 99.6 4.4E-14 9.6E-19 103.9 12.2 114 3-121 269-405 (520)
218 PRK08340 glucose-1-dehydrogena 99.6 7.6E-14 1.6E-18 94.4 12.2 79 4-86 1-87 (259)
219 PRK08945 putative oxoacyl-(acy 99.6 4E-14 8.6E-19 95.1 10.7 116 2-119 11-154 (247)
220 PRK08177 short chain dehydroge 99.6 9.5E-14 2.1E-18 92.1 12.3 108 4-118 2-132 (225)
221 PLN02780 ketoreductase/ oxidor 99.6 3E-14 6.5E-19 99.4 10.2 116 3-120 53-196 (320)
222 PRK06953 short chain dehydroge 99.6 7.7E-14 1.7E-18 92.4 11.6 108 4-119 2-132 (222)
223 KOG2865 NADH:ubiquinone oxidor 99.6 3.5E-14 7.6E-19 96.0 9.9 110 5-119 63-179 (391)
224 PRK08415 enoyl-(acyl carrier p 99.6 1.1E-13 2.4E-18 94.6 12.6 116 1-119 3-146 (274)
225 PRK06550 fabG 3-ketoacyl-(acyl 99.6 4.3E-14 9.4E-19 94.1 10.2 107 1-119 3-129 (235)
226 PRK08594 enoyl-(acyl carrier p 99.6 1.7E-13 3.8E-18 92.8 13.2 117 2-119 6-150 (257)
227 PRK07832 short chain dehydroge 99.6 5.8E-14 1.3E-18 95.6 10.9 115 4-119 1-140 (272)
228 TIGR02632 RhaD_aldol-ADH rhamn 99.6 4.6E-14 9.9E-19 106.8 11.3 118 2-119 413-555 (676)
229 TIGR02415 23BDH acetoin reduct 99.6 9.4E-14 2E-18 93.4 11.7 112 4-119 1-139 (254)
230 TIGR01829 AcAcCoA_reduct aceto 99.6 1E-13 2.2E-18 92.5 11.6 112 4-119 1-139 (242)
231 PRK07370 enoyl-(acyl carrier p 99.6 1.9E-13 4E-18 92.6 12.8 117 2-119 5-150 (258)
232 PRK06505 enoyl-(acyl carrier p 99.6 1.3E-13 2.8E-18 94.1 12.0 116 1-119 5-148 (271)
233 PRK05884 short chain dehydroge 99.6 1.1E-13 2.4E-18 91.9 11.3 109 4-119 1-133 (223)
234 smart00822 PKS_KR This enzymat 99.5 1.3E-13 2.8E-18 87.4 10.9 114 4-119 1-138 (180)
235 PRK06940 short chain dehydroge 99.5 1.1E-13 2.4E-18 94.6 11.2 111 2-118 1-127 (275)
236 PRK08261 fabG 3-ketoacyl-(acyl 99.5 1E-13 2.2E-18 100.6 11.5 113 2-119 209-345 (450)
237 COG2910 Putative NADH-flavin r 99.5 1.3E-13 2.8E-18 87.7 10.4 107 4-121 1-109 (211)
238 TIGR01831 fabG_rel 3-oxoacyl-( 99.5 9.4E-14 2E-18 92.7 10.2 112 6-119 1-138 (239)
239 KOG1429 dTDP-glucose 4-6-dehyd 99.5 4E-14 8.8E-19 95.5 8.1 109 2-121 26-145 (350)
240 COG1091 RfbD dTDP-4-dehydrorha 99.5 6.3E-14 1.4E-18 95.3 9.1 92 4-121 1-104 (281)
241 PRK06484 short chain dehydroge 99.5 2E-13 4.2E-18 100.5 12.3 114 2-120 4-144 (520)
242 PRK08324 short chain dehydroge 99.5 1.8E-13 3.8E-18 103.8 12.3 115 2-120 421-561 (681)
243 TIGR01777 yfcH conserved hypot 99.5 3.2E-14 6.9E-19 97.3 7.6 99 6-118 1-113 (292)
244 PF08659 KR: KR domain; Inter 99.5 1E-13 2.2E-18 89.6 9.1 114 5-120 2-139 (181)
245 PRK05786 fabG 3-ketoacyl-(acyl 99.5 3.4E-13 7.4E-18 89.9 12.0 114 2-119 4-138 (238)
246 PRK08303 short chain dehydroge 99.5 5.4E-13 1.2E-17 92.5 13.4 116 2-118 7-160 (305)
247 PRK08862 short chain dehydroge 99.5 2.8E-13 6E-18 90.4 11.5 116 2-119 4-146 (227)
248 PRK08703 short chain dehydroge 99.5 3.8E-13 8.2E-18 89.9 12.2 117 1-119 4-149 (239)
249 PRK07533 enoyl-(acyl carrier p 99.5 3.8E-13 8.2E-18 91.1 11.8 116 1-119 8-151 (258)
250 PRK12859 3-ketoacyl-(acyl-carr 99.5 4E-13 8.6E-18 90.8 11.8 118 2-120 5-158 (256)
251 PRK08217 fabG 3-ketoacyl-(acyl 99.5 1.9E-13 4E-18 91.7 10.1 114 2-119 4-153 (253)
252 PRK06603 enoyl-(acyl carrier p 99.5 4.2E-13 9.1E-18 91.0 11.9 116 1-119 6-149 (260)
253 PRK08159 enoyl-(acyl carrier p 99.5 5E-13 1.1E-17 91.3 12.3 116 1-119 8-151 (272)
254 PRK08690 enoyl-(acyl carrier p 99.5 5E-13 1.1E-17 90.7 11.8 116 1-119 4-149 (261)
255 TIGR02685 pter_reduc_Leis pter 99.5 3.4E-13 7.4E-18 91.6 10.6 82 4-85 2-94 (267)
256 TIGR01500 sepiapter_red sepiap 99.5 2.7E-13 5.8E-18 91.6 10.0 115 5-120 2-154 (256)
257 PRK07984 enoyl-(acyl carrier p 99.5 7.9E-13 1.7E-17 89.9 12.3 116 1-119 4-148 (262)
258 PRK05599 hypothetical protein; 99.5 5.2E-13 1.1E-17 89.9 11.2 115 4-120 1-140 (246)
259 KOG1209 1-Acyl dihydroxyaceton 99.5 2.7E-13 5.7E-18 88.4 8.8 115 3-124 7-146 (289)
260 TIGR03443 alpha_am_amid L-amin 99.5 4.5E-13 9.8E-18 107.8 11.9 116 3-121 971-1113(1389)
261 PLN00015 protochlorophyllide r 99.5 5.8E-13 1.3E-17 92.4 11.0 110 7-120 1-140 (308)
262 COG3967 DltE Short-chain dehyd 99.5 4.1E-13 8.9E-18 87.0 9.3 115 2-122 4-144 (245)
263 PRK07889 enoyl-(acyl carrier p 99.5 1.1E-12 2.4E-17 88.8 11.8 112 3-117 7-146 (256)
264 PRK06997 enoyl-(acyl carrier p 99.5 1.8E-12 3.9E-17 88.0 11.4 116 1-119 4-148 (260)
265 PRK07578 short chain dehydroge 99.5 1.4E-12 2.9E-17 85.1 10.3 96 4-119 1-114 (199)
266 COG0702 Predicted nucleoside-d 99.5 1.8E-12 3.9E-17 87.9 11.2 104 4-118 1-108 (275)
267 KOG1200 Mitochondrial/plastidi 99.5 1.7E-12 3.7E-17 83.6 10.2 115 3-120 14-154 (256)
268 PLN02260 probable rhamnose bio 99.4 7.2E-13 1.6E-17 100.3 9.6 88 2-116 379-481 (668)
269 COG1089 Gmd GDP-D-mannose dehy 99.4 1.5E-12 3.3E-17 88.0 9.9 117 2-118 1-132 (345)
270 PRK09009 C factor cell-cell si 99.4 1.6E-12 3.5E-17 86.6 9.6 103 4-117 1-132 (235)
271 COG1090 Predicted nucleoside-d 99.4 7.6E-13 1.6E-17 89.1 7.5 102 6-122 1-115 (297)
272 KOG0725 Reductases with broad 99.4 6.6E-12 1.4E-16 85.8 12.1 118 2-120 7-153 (270)
273 COG1028 FabG Dehydrogenases wi 99.4 1.1E-11 2.3E-16 83.4 11.9 118 1-119 3-145 (251)
274 KOG4169 15-hydroxyprostaglandi 99.4 5.2E-12 1.1E-16 83.0 9.2 117 3-121 5-141 (261)
275 PRK08309 short chain dehydroge 99.4 1.4E-11 3E-16 79.4 10.8 99 4-116 1-111 (177)
276 KOG1611 Predicted short chain- 99.4 1.5E-11 3.3E-16 80.7 10.8 100 1-104 1-128 (249)
277 COG1748 LYS9 Saccharopine dehy 99.4 1.5E-11 3.3E-16 87.1 11.5 98 3-116 1-99 (389)
278 PRK06720 hypothetical protein; 99.4 5.6E-12 1.2E-16 80.6 8.5 83 2-86 15-104 (169)
279 KOG1221 Acyl-CoA reductase [Li 99.4 1.4E-11 3.1E-16 88.8 11.2 118 2-119 11-157 (467)
280 KOG1210 Predicted 3-ketosphing 99.3 1.2E-11 2.5E-16 84.7 8.9 116 4-119 34-174 (331)
281 KOG1610 Corticosteroid 11-beta 99.3 3.2E-11 6.9E-16 82.6 10.8 112 3-119 29-167 (322)
282 KOG4039 Serine/threonine kinas 99.3 3.1E-11 6.7E-16 76.8 9.8 108 1-118 16-132 (238)
283 PLN02730 enoyl-[acyl-carrier-p 99.3 2.9E-11 6.3E-16 83.9 10.6 118 1-119 7-181 (303)
284 TIGR02813 omega_3_PfaA polyket 99.3 3.7E-11 8.1E-16 100.5 11.4 118 3-121 1997-2180(2582)
285 KOG0747 Putative NAD+-dependen 99.3 1.3E-11 2.7E-16 83.5 7.0 117 3-121 6-136 (331)
286 KOG1203 Predicted dehydrogenas 99.3 7.1E-11 1.5E-15 84.1 10.4 113 2-119 78-203 (411)
287 PF03435 Saccharop_dh: Sacchar 99.2 2.2E-10 4.8E-15 81.8 12.1 95 6-115 1-97 (386)
288 KOG1207 Diacetyl reductase/L-x 99.2 7.8E-11 1.7E-15 74.9 8.6 112 3-119 7-139 (245)
289 KOG1014 17 beta-hydroxysteroid 99.2 2.2E-10 4.9E-15 78.4 10.3 115 5-121 51-191 (312)
290 KOG1478 3-keto sterol reductas 99.2 2.5E-10 5.3E-15 76.5 9.1 119 1-119 1-177 (341)
291 KOG2733 Uncharacterized membra 99.2 2.3E-10 5E-15 79.6 8.4 93 5-107 7-109 (423)
292 PTZ00325 malate dehydrogenase; 99.1 6.6E-10 1.4E-14 77.6 10.0 109 3-118 8-126 (321)
293 PF13561 adh_short_C2: Enoyl-( 99.1 9.8E-10 2.1E-14 73.7 8.3 106 10-119 1-136 (241)
294 PRK06300 enoyl-(acyl carrier p 99.0 1E-09 2.2E-14 76.1 7.3 35 2-36 7-43 (299)
295 cd01078 NAD_bind_H4MPT_DH NADP 99.0 4.6E-09 1E-13 68.5 9.2 79 2-84 27-106 (194)
296 PLN00106 malate dehydrogenase 99.0 7.6E-09 1.6E-13 72.4 9.3 108 3-117 18-135 (323)
297 PRK13656 trans-2-enoyl-CoA red 99.0 7.3E-09 1.6E-13 73.6 9.1 82 3-86 41-142 (398)
298 PRK09620 hypothetical protein; 99.0 3.7E-09 8E-14 70.7 7.2 83 1-89 1-101 (229)
299 PRK06732 phosphopantothenate-- 98.9 9.5E-09 2.1E-13 68.8 8.8 73 7-88 19-94 (229)
300 KOG1199 Short-chain alcohol de 98.9 2.6E-09 5.7E-14 68.0 5.4 95 5-104 11-132 (260)
301 TIGR00715 precor6x_red precorr 98.9 2.2E-08 4.7E-13 68.0 9.8 90 4-107 1-92 (256)
302 cd01336 MDH_cytoplasmic_cytoso 98.9 3.8E-08 8.2E-13 69.1 9.9 109 3-116 2-128 (325)
303 KOG1372 GDP-mannose 4,6 dehydr 98.9 4.5E-08 9.8E-13 65.7 9.5 104 4-107 29-148 (376)
304 PRK05086 malate dehydrogenase; 98.8 3.2E-08 6.9E-13 69.1 8.9 107 4-117 1-118 (312)
305 COG0569 TrkA K+ transport syst 98.8 1.3E-07 2.8E-12 63.2 10.9 72 4-84 1-75 (225)
306 PRK12428 3-alpha-hydroxysteroi 98.8 2.1E-08 4.6E-13 67.3 7.0 90 19-121 1-101 (241)
307 COG3268 Uncharacterized conser 98.8 2E-08 4.3E-13 69.6 6.9 77 4-87 7-83 (382)
308 PRK12548 shikimate 5-dehydroge 98.8 3.3E-08 7.2E-13 68.3 7.8 81 2-84 125-208 (289)
309 PRK05579 bifunctional phosphop 98.8 3.7E-08 8E-13 70.8 7.9 75 1-88 186-280 (399)
310 PF02254 TrkA_N: TrkA-N domain 98.7 1E-06 2.2E-11 52.7 11.3 92 6-113 1-93 (116)
311 KOG1431 GDP-L-fucose synthetas 98.7 3.9E-08 8.4E-13 65.2 5.0 92 3-117 1-107 (315)
312 PLN02968 Probable N-acetyl-gam 98.6 2.8E-07 6.1E-12 65.9 8.0 97 3-118 38-136 (381)
313 COG0623 FabI Enoyl-[acyl-carri 98.6 8.5E-07 1.8E-11 58.9 9.4 81 1-86 4-95 (259)
314 PRK09496 trkA potassium transp 98.5 1.8E-06 4E-11 62.9 11.0 72 4-84 1-74 (453)
315 cd00704 MDH Malate dehydrogena 98.5 1.2E-06 2.7E-11 61.4 9.7 98 5-116 2-126 (323)
316 PF01488 Shikimate_DH: Shikima 98.5 9.9E-07 2.2E-11 54.5 8.0 75 2-86 11-86 (135)
317 PLN02819 lysine-ketoglutarate 98.5 1.5E-06 3.3E-11 68.7 10.7 76 3-85 569-658 (1042)
318 PF00056 Ldh_1_N: lactate/mala 98.5 1.5E-06 3.2E-11 54.1 8.4 106 4-116 1-118 (141)
319 PRK12475 thiamine/molybdopteri 98.5 7E-06 1.5E-10 58.0 11.9 104 2-116 23-148 (338)
320 PRK07688 thiamine/molybdopteri 98.4 9.1E-06 2E-10 57.5 12.0 104 2-116 23-148 (339)
321 PRK14874 aspartate-semialdehyd 98.4 3.1E-06 6.6E-11 59.7 9.6 92 3-117 1-95 (334)
322 TIGR00521 coaBC_dfp phosphopan 98.4 1.5E-06 3.3E-11 62.3 7.9 75 1-88 183-278 (390)
323 PRK14982 acyl-ACP reductase; P 98.4 1.1E-06 2.5E-11 61.9 6.8 72 2-87 154-227 (340)
324 PRK14106 murD UDP-N-acetylmura 98.4 2.7E-06 5.9E-11 62.0 8.9 76 1-85 3-78 (450)
325 TIGR01758 MDH_euk_cyt malate d 98.4 4.2E-06 9E-11 58.8 9.4 98 5-116 1-125 (324)
326 PRK10669 putative cation:proto 98.4 6.6E-06 1.4E-10 61.7 10.9 72 4-84 418-490 (558)
327 PRK00436 argC N-acetyl-gamma-g 98.4 3.5E-06 7.6E-11 59.7 8.9 98 3-118 2-101 (343)
328 PF01118 Semialdhyde_dh: Semia 98.4 2.6E-05 5.7E-10 47.2 11.4 96 5-118 1-99 (121)
329 PRK09496 trkA potassium transp 98.4 1.3E-05 2.8E-10 58.5 11.6 99 3-116 231-330 (453)
330 PRK03659 glutathione-regulated 98.4 8E-06 1.7E-10 61.8 10.7 88 4-107 401-489 (601)
331 PRK11064 wecC UDP-N-acetyl-D-m 98.3 1.7E-05 3.8E-10 57.5 11.1 36 1-37 1-36 (415)
332 cd05294 LDH-like_MDH_nadp A la 98.3 7E-06 1.5E-10 57.4 8.5 112 4-119 1-124 (309)
333 PF04127 DFP: DNA / pantothena 98.3 7.7E-06 1.7E-10 53.1 8.0 78 1-89 1-96 (185)
334 TIGR02114 coaB_strep phosphopa 98.3 1.5E-06 3.2E-11 58.2 4.8 66 7-86 18-91 (227)
335 PF01113 DapB_N: Dihydrodipico 98.3 2.1E-05 4.5E-10 47.9 9.4 97 4-116 1-99 (124)
336 PRK04148 hypothetical protein; 98.2 5.5E-05 1.2E-09 46.5 10.7 90 3-112 17-106 (134)
337 PRK06129 3-hydroxyacyl-CoA deh 98.2 3.5E-06 7.6E-11 58.8 6.1 33 4-37 3-35 (308)
338 PRK08664 aspartate-semialdehyd 98.2 1.5E-05 3.1E-10 56.7 9.0 37 1-37 1-38 (349)
339 PF03721 UDPG_MGDP_dh_N: UDP-g 98.2 5.8E-06 1.3E-10 53.7 6.5 108 4-120 1-123 (185)
340 PF00899 ThiF: ThiF family; I 98.2 7.4E-05 1.6E-09 46.0 11.0 103 3-116 2-124 (135)
341 TIGR02356 adenyl_thiF thiazole 98.2 4.8E-05 1E-09 50.1 10.6 104 2-116 20-143 (202)
342 PRK08644 thiamine biosynthesis 98.2 7.8E-05 1.7E-09 49.5 11.4 103 3-116 28-150 (212)
343 PRK03562 glutathione-regulated 98.2 3E-05 6.4E-10 59.0 10.5 72 4-84 401-473 (621)
344 KOG1204 Predicted dehydrogenas 98.2 2.1E-06 4.6E-11 56.9 3.7 113 3-120 6-148 (253)
345 PRK05671 aspartate-semialdehyd 98.2 2.8E-05 6.1E-10 54.9 9.3 94 1-117 1-98 (336)
346 KOG4288 Predicted oxidoreducta 98.2 2.3E-06 4.9E-11 57.0 3.5 37 3-39 2-38 (283)
347 cd01065 NAD_bind_Shikimate_DH 98.1 1.7E-05 3.8E-10 49.6 7.3 74 2-86 18-92 (155)
348 TIGR02354 thiF_fam2 thiamine b 98.1 0.00017 3.6E-09 47.5 12.0 106 2-116 20-144 (200)
349 PRK00066 ldh L-lactate dehydro 98.1 0.00012 2.7E-09 51.3 12.0 106 3-116 6-122 (315)
350 cd05291 HicDH_like L-2-hydroxy 98.1 8.7E-05 1.9E-09 51.8 10.8 105 4-116 1-117 (306)
351 TIGR01296 asd_B aspartate-semi 98.1 3.2E-05 6.9E-10 54.8 8.6 90 5-117 1-93 (339)
352 TIGR01915 npdG NADPH-dependent 98.1 8.3E-05 1.8E-09 49.5 10.0 34 4-37 1-34 (219)
353 TIGR01850 argC N-acetyl-gamma- 98.1 3E-05 6.5E-10 55.0 8.2 98 4-118 1-101 (346)
354 cd00757 ThiF_MoeB_HesA_family 98.1 0.00013 2.8E-09 48.9 10.8 104 2-116 20-143 (228)
355 PF03446 NAD_binding_2: NAD bi 98.1 2.6E-05 5.6E-10 49.6 7.1 34 3-37 1-34 (163)
356 PRK08223 hypothetical protein; 98.1 0.00014 3E-09 50.3 11.0 105 3-116 27-151 (287)
357 PLN02353 probable UDP-glucose 98.0 7.3E-05 1.6E-09 55.1 9.6 108 4-120 2-130 (473)
358 cd01337 MDH_glyoxysomal_mitoch 98.0 0.00012 2.6E-09 51.3 10.1 107 4-116 1-117 (310)
359 TIGR02853 spore_dpaA dipicolin 98.0 5E-05 1.1E-09 52.6 8.1 69 2-84 150-218 (287)
360 COG1004 Ugd Predicted UDP-gluc 98.0 9E-05 1.9E-09 53.0 9.3 111 4-120 1-123 (414)
361 PRK08328 hypothetical protein; 98.0 0.00029 6.2E-09 47.4 11.3 103 3-116 27-150 (231)
362 PRK08293 3-hydroxybutyryl-CoA 98.0 4.1E-05 8.9E-10 52.9 7.5 36 1-37 1-36 (287)
363 TIGR02355 moeB molybdopterin s 98.0 0.00044 9.6E-09 46.7 12.2 102 3-115 24-145 (240)
364 cd01338 MDH_choloroplast_like 98.0 0.00012 2.6E-09 51.5 9.7 107 3-116 2-128 (322)
365 PRK08057 cobalt-precorrin-6x r 98.0 0.00023 5.1E-09 48.3 10.8 89 3-107 2-92 (248)
366 cd01487 E1_ThiF_like E1_ThiF_l 98.0 0.00026 5.6E-09 45.6 10.5 101 5-116 1-121 (174)
367 PRK08762 molybdopterin biosynt 98.0 0.00019 4.2E-09 51.5 10.8 103 3-116 135-257 (376)
368 TIGR01772 MDH_euk_gproteo mala 98.0 0.00012 2.5E-09 51.3 9.3 106 5-116 1-116 (312)
369 TIGR00518 alaDH alanine dehydr 98.0 6.8E-05 1.5E-09 53.7 8.1 73 3-84 167-239 (370)
370 PRK00258 aroE shikimate 5-dehy 98.0 5.4E-05 1.2E-09 52.1 7.4 70 3-84 123-194 (278)
371 cd01483 E1_enzyme_family Super 97.9 0.00073 1.6E-08 41.9 11.7 101 5-116 1-121 (143)
372 PRK10537 voltage-gated potassi 97.9 0.00031 6.8E-09 50.7 11.2 70 4-84 241-311 (393)
373 PRK07066 3-hydroxybutyryl-CoA 97.9 0.0001 2.2E-09 51.8 8.5 81 3-84 7-92 (321)
374 PRK08306 dipicolinate synthase 97.9 0.00011 2.3E-09 51.2 8.4 69 2-84 151-219 (296)
375 PRK02472 murD UDP-N-acetylmura 97.9 8.3E-05 1.8E-09 54.3 8.1 74 2-85 4-78 (447)
376 cd05290 LDH_3 A subgroup of L- 97.9 0.00045 9.8E-09 48.3 11.2 100 5-113 1-115 (307)
377 PRK05690 molybdopterin biosynt 97.9 0.00087 1.9E-08 45.5 12.3 102 3-115 32-153 (245)
378 cd01485 E1-1_like Ubiquitin ac 97.9 0.0005 1.1E-08 45.2 10.8 104 3-116 19-145 (198)
379 PLN02383 aspartate semialdehyd 97.9 0.0001 2.3E-09 52.3 8.0 92 3-117 7-101 (344)
380 KOG0172 Lysine-ketoglutarate r 97.9 0.00012 2.5E-09 52.3 7.9 74 3-85 2-78 (445)
381 TIGR00872 gnd_rel 6-phosphoglu 97.9 0.00038 8.2E-09 48.5 10.4 68 4-84 1-68 (298)
382 cd01492 Aos1_SUMO Ubiquitin ac 97.9 0.00063 1.4E-08 44.7 10.8 102 3-116 21-142 (197)
383 cd00650 LDH_MDH_like NAD-depen 97.9 0.00022 4.9E-09 48.7 9.0 98 6-107 1-110 (263)
384 TIGR01759 MalateDH-SF1 malate 97.9 0.00022 4.8E-09 50.2 9.1 107 3-116 3-129 (323)
385 cd00755 YgdL_like Family of ac 97.8 0.00068 1.5E-08 45.6 11.0 104 2-116 10-134 (231)
386 PRK05442 malate dehydrogenase; 97.8 0.00033 7.2E-09 49.4 9.9 107 3-116 4-130 (326)
387 COG0039 Mdh Malate/lactate deh 97.8 0.00045 9.7E-09 48.3 10.3 104 4-114 1-115 (313)
388 PRK05600 thiamine biosynthesis 97.8 0.00051 1.1E-08 49.3 10.9 96 3-107 41-156 (370)
389 TIGR03026 NDP-sugDHase nucleot 97.8 0.00022 4.8E-09 51.7 9.2 33 4-37 1-33 (411)
390 PRK05597 molybdopterin biosynt 97.8 0.00056 1.2E-08 48.8 10.9 103 3-116 28-150 (355)
391 PRK11559 garR tartronate semia 97.8 6E-05 1.3E-09 52.2 5.9 66 3-84 2-67 (296)
392 PRK00048 dihydrodipicolinate r 97.8 0.00042 9.1E-09 47.3 9.8 67 4-85 2-70 (257)
393 cd08295 double_bond_reductase_ 97.8 0.00032 6.9E-09 49.3 9.5 74 3-84 152-230 (338)
394 PRK08655 prephenate dehydrogen 97.8 0.00047 1E-08 50.5 10.6 68 4-85 1-68 (437)
395 cd08259 Zn_ADH5 Alcohol dehydr 97.8 0.0005 1.1E-08 47.7 10.4 72 3-85 163-236 (332)
396 PRK06223 malate dehydrogenase; 97.8 0.00052 1.1E-08 47.8 10.4 109 3-116 2-119 (307)
397 cd01075 NAD_bind_Leu_Phe_Val_D 97.8 0.00011 2.3E-09 48.4 6.5 36 1-37 26-61 (200)
398 PRK11863 N-acetyl-gamma-glutam 97.8 0.00033 7.2E-09 49.1 9.3 35 2-36 1-36 (313)
399 PTZ00117 malate dehydrogenase; 97.8 0.00029 6.4E-09 49.5 9.1 109 2-116 4-122 (319)
400 PRK13940 glutamyl-tRNA reducta 97.8 0.00019 4.1E-09 52.2 8.2 73 2-86 180-253 (414)
401 KOG2774 NAD dependent epimeras 97.8 4.2E-05 9E-10 51.4 4.4 102 4-116 45-159 (366)
402 PRK15116 sulfur acceptor prote 97.8 0.0013 2.8E-08 45.2 11.8 105 2-117 29-154 (268)
403 PF01210 NAD_Gly3P_dh_N: NAD-d 97.8 5.6E-05 1.2E-09 47.8 4.8 73 5-84 1-78 (157)
404 PRK07819 3-hydroxybutyryl-CoA 97.8 8.7E-05 1.9E-09 51.4 6.1 35 4-39 6-40 (286)
405 COG0169 AroE Shikimate 5-dehyd 97.8 0.00012 2.6E-09 50.5 6.7 73 3-84 126-199 (283)
406 PRK11880 pyrroline-5-carboxyla 97.8 0.00053 1.1E-08 46.8 9.7 34 3-37 2-38 (267)
407 PRK12549 shikimate 5-dehydroge 97.8 0.00011 2.4E-09 50.8 6.3 71 3-83 127-200 (284)
408 cd05293 LDH_1 A subgroup of L- 97.8 0.00026 5.7E-09 49.6 8.2 107 3-116 3-120 (312)
409 TIGR02825 B4_12hDH leukotriene 97.8 0.0004 8.7E-09 48.5 9.2 73 3-84 139-216 (325)
410 TIGR01809 Shik-DH-AROM shikima 97.8 0.00018 3.9E-09 49.7 7.3 75 3-85 125-200 (282)
411 TIGR00507 aroE shikimate 5-deh 97.8 0.00024 5.2E-09 48.8 7.9 34 3-37 117-150 (270)
412 TIGR01470 cysG_Nterm siroheme 97.8 0.0012 2.6E-08 43.7 10.9 87 2-107 8-94 (205)
413 PRK00094 gpsA NAD(P)H-dependen 97.7 0.00052 1.1E-08 48.0 9.7 33 4-37 2-34 (325)
414 cd01080 NAD_bind_m-THF_DH_Cycl 97.7 0.00019 4.2E-09 45.9 6.9 36 2-37 43-78 (168)
415 cd01489 Uba2_SUMO Ubiquitin ac 97.7 0.0011 2.3E-08 46.6 11.0 102 5-116 1-122 (312)
416 cd01484 E1-2_like Ubiquitin ac 97.7 0.0009 1.9E-08 45.1 10.2 102 5-116 1-123 (234)
417 cd05292 LDH_2 A subgroup of L- 97.7 0.0011 2.4E-08 46.4 11.0 96 4-107 1-107 (308)
418 PRK12749 quinate/shikimate deh 97.7 0.00038 8.3E-09 48.3 8.6 80 3-84 124-205 (288)
419 PLN02602 lactate dehydrogenase 97.7 0.0016 3.5E-08 46.4 11.8 106 4-116 38-154 (350)
420 COG2085 Predicted dinucleotide 97.7 0.0012 2.7E-08 43.5 10.3 68 4-84 2-69 (211)
421 PTZ00082 L-lactate dehydrogena 97.7 0.0027 5.8E-08 44.8 12.7 106 3-116 6-128 (321)
422 PRK14619 NAD(P)H-dependent gly 97.7 0.00053 1.2E-08 47.9 9.2 35 2-37 3-37 (308)
423 TIGR01763 MalateDH_bact malate 97.7 0.00089 1.9E-08 46.8 10.2 108 4-116 2-118 (305)
424 PRK07878 molybdopterin biosynt 97.7 0.0012 2.6E-08 47.7 11.1 103 3-116 42-164 (392)
425 PRK07531 bifunctional 3-hydrox 97.7 0.0003 6.6E-09 52.2 8.2 80 3-84 4-89 (495)
426 PRK06035 3-hydroxyacyl-CoA deh 97.7 0.00013 2.9E-09 50.5 5.8 36 1-37 1-36 (291)
427 PRK06019 phosphoribosylaminoim 97.7 0.0004 8.7E-09 49.8 8.3 68 3-81 2-69 (372)
428 PRK11199 tyrA bifunctional cho 97.7 0.00075 1.6E-08 48.5 9.6 35 3-37 98-132 (374)
429 PRK09260 3-hydroxybutyryl-CoA 97.7 0.00026 5.7E-09 48.9 7.1 33 4-37 2-34 (288)
430 COG0002 ArgC Acetylglutamate s 97.7 0.00054 1.2E-08 48.3 8.5 98 2-117 1-102 (349)
431 PRK14027 quinate/shikimate deh 97.7 0.0003 6.5E-09 48.7 7.1 74 3-84 127-203 (283)
432 PRK13302 putative L-aspartate 97.6 0.0012 2.5E-08 45.5 9.8 71 1-85 4-77 (271)
433 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.00046 9.9E-09 48.4 7.8 73 2-87 177-250 (311)
434 cd08266 Zn_ADH_like1 Alcohol d 97.6 0.002 4.2E-08 44.8 10.9 94 3-116 167-265 (342)
435 PRK07530 3-hydroxybutyryl-CoA 97.6 0.00039 8.4E-09 48.2 7.3 36 1-37 2-37 (292)
436 COG0373 HemA Glutamyl-tRNA red 97.6 0.001 2.2E-08 48.2 9.5 71 2-85 177-248 (414)
437 KOG1494 NAD-dependent malate d 97.6 0.00085 1.8E-08 46.2 8.5 107 4-116 29-145 (345)
438 PRK06522 2-dehydropantoate 2-r 97.6 0.00093 2E-08 46.3 9.1 33 4-37 1-33 (304)
439 PF02571 CbiJ: Precorrin-6x re 97.6 0.0021 4.5E-08 43.8 10.4 91 4-107 1-93 (249)
440 PRK07877 hypothetical protein; 97.6 0.0017 3.6E-08 50.4 11.0 102 3-116 107-228 (722)
441 PRK12921 2-dehydropantoate 2-r 97.6 0.001 2.2E-08 46.1 9.1 31 4-35 1-31 (305)
442 COG0604 Qor NADPH:quinone redu 97.6 0.0013 2.7E-08 46.5 9.6 74 3-85 143-221 (326)
443 TIGR00978 asd_EA aspartate-sem 97.6 0.0016 3.6E-08 46.2 10.0 33 4-36 1-34 (341)
444 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00051 1.1E-08 44.3 6.9 67 2-85 35-101 (178)
445 PRK06130 3-hydroxybutyryl-CoA 97.6 0.00058 1.3E-08 47.7 7.6 33 4-37 5-37 (311)
446 cd08293 PTGR2 Prostaglandin re 97.5 0.0025 5.3E-08 44.8 10.8 73 4-84 156-233 (345)
447 cd08253 zeta_crystallin Zeta-c 97.5 0.0015 3.2E-08 44.9 9.5 74 3-85 145-223 (325)
448 PLN02928 oxidoreductase family 97.5 0.00052 1.1E-08 48.8 7.2 79 2-85 158-236 (347)
449 PLN00112 malate dehydrogenase 97.5 0.0028 6.1E-08 46.5 11.1 106 4-116 101-226 (444)
450 cd08294 leukotriene_B4_DH_like 97.5 0.0017 3.6E-08 45.2 9.7 73 3-84 144-220 (329)
451 PRK07679 pyrroline-5-carboxyla 97.5 0.00072 1.6E-08 46.6 7.7 36 1-37 1-40 (279)
452 PRK15057 UDP-glucose 6-dehydro 97.5 0.0011 2.3E-08 47.9 8.8 108 4-119 1-119 (388)
453 PRK06598 aspartate-semialdehyd 97.5 0.0014 3.1E-08 46.9 9.3 92 4-116 2-98 (369)
454 PLN02520 bifunctional 3-dehydr 97.5 0.00047 1E-08 51.7 7.1 34 3-37 379-412 (529)
455 COG0677 WecC UDP-N-acetyl-D-ma 97.5 0.004 8.7E-08 44.9 11.4 92 4-106 10-117 (436)
456 TIGR01851 argC_other N-acetyl- 97.5 0.0014 3E-08 45.9 9.0 78 4-116 2-80 (310)
457 PRK05808 3-hydroxybutyryl-CoA 97.5 0.00025 5.3E-09 48.9 5.3 36 1-37 1-36 (282)
458 PRK06718 precorrin-2 dehydroge 97.5 0.0015 3.2E-08 43.1 8.7 35 2-37 9-43 (202)
459 PRK07411 hypothetical protein; 97.5 0.0036 7.7E-08 45.3 11.3 102 3-115 38-159 (390)
460 COG1064 AdhP Zn-dependent alco 97.5 0.003 6.4E-08 44.8 10.6 71 3-84 167-238 (339)
461 PRK15461 NADH-dependent gamma- 97.5 0.00023 5E-09 49.5 5.1 33 4-37 2-34 (296)
462 PLN00203 glutamyl-tRNA reducta 97.5 0.00082 1.8E-08 50.2 8.1 73 3-85 266-339 (519)
463 PF10727 Rossmann-like: Rossma 97.5 0.00056 1.2E-08 41.8 6.1 34 3-37 10-44 (127)
464 PTZ00142 6-phosphogluconate de 97.5 0.0034 7.4E-08 46.5 11.2 33 4-37 2-34 (470)
465 COG1179 Dinucleotide-utilizing 97.5 0.0039 8.3E-08 42.1 10.4 103 3-116 30-153 (263)
466 PRK14851 hypothetical protein; 97.5 0.0026 5.7E-08 49.0 10.9 104 3-115 43-166 (679)
467 PRK08040 putative semialdehyde 97.5 0.0013 2.8E-08 46.6 8.7 93 2-117 3-98 (336)
468 PRK07634 pyrroline-5-carboxyla 97.5 0.0054 1.2E-07 41.3 11.4 70 2-85 3-76 (245)
469 KOG1198 Zinc-binding oxidoredu 97.5 0.00093 2E-08 47.6 7.9 74 3-85 158-235 (347)
470 PRK07417 arogenate dehydrogena 97.5 0.0018 3.9E-08 44.7 9.2 33 4-37 1-33 (279)
471 PRK09599 6-phosphogluconate de 97.5 0.0033 7.2E-08 43.8 10.6 33 4-37 1-33 (301)
472 PRK00045 hemA glutamyl-tRNA re 97.5 0.00082 1.8E-08 49.0 7.8 72 2-86 181-253 (423)
473 PRK09424 pntA NAD(P) transhydr 97.5 0.0023 5E-08 47.7 10.1 74 3-85 165-258 (509)
474 TIGR01035 hemA glutamyl-tRNA r 97.5 0.00068 1.5E-08 49.4 7.3 71 3-86 180-251 (417)
475 PRK07502 cyclohexadienyl dehyd 97.5 0.003 6.4E-08 44.1 10.2 69 3-85 6-76 (307)
476 COG0026 PurK Phosphoribosylami 97.5 0.0008 1.7E-08 47.8 7.2 68 3-81 1-68 (375)
477 TIGR03693 ocin_ThiF_like putat 97.5 0.006 1.3E-07 46.3 12.0 97 4-107 130-231 (637)
478 PRK08229 2-dehydropantoate 2-r 97.5 0.0011 2.5E-08 46.7 8.1 34 3-37 2-35 (341)
479 COG0289 DapB Dihydrodipicolina 97.4 0.0043 9.4E-08 42.3 10.0 36 2-37 1-38 (266)
480 PF02737 3HCDH_N: 3-hydroxyacy 97.4 0.00036 7.9E-09 45.1 4.8 33 5-38 1-33 (180)
481 PRK14852 hypothetical protein; 97.4 0.0039 8.5E-08 49.6 11.1 105 3-116 332-456 (989)
482 PRK05476 S-adenosyl-L-homocyst 97.4 0.001 2.2E-08 48.5 7.4 35 2-37 211-245 (425)
483 PRK04308 murD UDP-N-acetylmura 97.4 0.0025 5.4E-08 46.7 9.5 75 2-86 4-78 (445)
484 PF03807 F420_oxidored: NADP o 97.4 0.0006 1.3E-08 39.2 5.2 69 5-87 1-73 (96)
485 TIGR01505 tartro_sem_red 2-hyd 97.4 0.00033 7.2E-09 48.5 4.7 32 5-37 1-32 (291)
486 PRK14194 bifunctional 5,10-met 97.4 0.00097 2.1E-08 46.5 6.8 36 2-37 158-193 (301)
487 PF00070 Pyr_redox: Pyridine n 97.4 0.002 4.4E-08 35.9 7.1 34 5-39 1-34 (80)
488 PRK15469 ghrA bifunctional gly 97.4 0.0013 2.8E-08 46.2 7.5 66 2-85 135-200 (312)
489 KOG0023 Alcohol dehydrogenase, 97.4 0.0028 6E-08 44.5 8.9 75 2-84 181-255 (360)
490 smart00859 Semialdhyde_dh Semi 97.4 0.0028 6E-08 38.2 8.1 30 5-34 1-31 (122)
491 PRK06728 aspartate-semialdehyd 97.4 0.0055 1.2E-07 43.6 10.6 92 3-117 5-100 (347)
492 PLN02948 phosphoribosylaminoim 97.4 0.0015 3.4E-08 49.4 8.3 71 1-82 20-90 (577)
493 COG0240 GpsA Glycerol-3-phosph 97.4 0.0026 5.7E-08 44.7 8.9 75 3-84 1-80 (329)
494 PLN03154 putative allyl alcoho 97.4 0.004 8.6E-08 44.2 10.0 35 3-37 159-193 (348)
495 PRK01438 murD UDP-N-acetylmura 97.4 0.0019 4.1E-08 47.7 8.6 74 2-85 15-88 (480)
496 cd00300 LDH_like L-lactate deh 97.4 0.0057 1.2E-07 42.7 10.4 95 6-107 1-106 (300)
497 PRK09310 aroDE bifunctional 3- 97.4 0.0012 2.6E-08 48.9 7.5 35 2-37 331-365 (477)
498 PF00670 AdoHcyase_NAD: S-aden 97.3 0.0019 4E-08 41.1 7.3 67 2-85 22-88 (162)
499 cd08250 Mgc45594_like Mgc45594 97.3 0.0054 1.2E-07 42.7 10.3 35 3-37 140-174 (329)
500 cd05188 MDR Medium chain reduc 97.3 0.0037 8.1E-08 41.9 9.2 73 3-85 135-211 (271)
No 1
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.92 E-value=4e-24 Score=146.70 Aligned_cols=116 Identities=26% Similarity=0.305 Sum_probs=99.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+++++||||+||||+++++.|+++||.|+++.|+++. +...+++..++ ..+...+.+|+.|+++++++++++|.|+
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~--~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED--EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch--hhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 5789999999999999999999999999999999854 22333444444 3458999999999999999999999999
Q ss_pred EeCccccc---------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 81 CTISGVHF---------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 81 ~~a~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
|.|.|..+ .++.+.|++|++++|.+.++++|+|++||+..
T Consensus 84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aA 132 (327)
T KOG1502|consen 84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAA 132 (327)
T ss_pred EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHH
Confidence 99998654 34568999999999999988999999998753
No 2
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=6e-23 Score=138.66 Aligned_cols=110 Identities=30% Similarity=0.465 Sum_probs=94.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 81 (124)
|+++||||+|+||++.+.+|++.|++|+++++-..+. .+.... ...+++++|+.|.+.++++|+. +|+|+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~----~~~v~~---~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH----KIALLK---LQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC----HHHhhh---ccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 6899999999999999999999999999999876332 122211 1168999999999999999984 999999
Q ss_pred eCc----------cccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 82 TIS----------GVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 82 ~a~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|+ |..|++.|+.|+.+++++|.+.+ ++++||+||+.+|
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavY 122 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVY 122 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhc
Confidence 998 34678999999999999999999 9999999999887
No 3
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.88 E-value=2.2e-22 Score=137.73 Aligned_cols=109 Identities=34% Similarity=0.485 Sum_probs=90.1
Q ss_pred EEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCC-eEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 7 LVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQG-AHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 7 li~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
+||||+|++|++++++|+++| ++|+++++.+.... .......+ .+++.+|++|++++.++++++|+|||+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~------~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A 74 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF------LKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTA 74 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc------chhhhcccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence 699999999999999999999 79999988763211 11112223 3499999999999999999999999999
Q ss_pred cccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236 84 SGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 84 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~ 122 (124)
++.. ++++|+.|+++++++|.+.+ ++|+||+||...++
T Consensus 75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~ 121 (280)
T PF01073_consen 75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVF 121 (280)
T ss_pred ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeE
Confidence 8653 24678999999999999998 99999999987664
No 4
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.87 E-value=2e-21 Score=136.54 Aligned_cols=119 Identities=19% Similarity=0.180 Sum_probs=94.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh---hccCCeEEEEcccCChHHHHHHhcccCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS---FKKQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
.+|+++||||+|++|++++++|+++|++|++++|............... ....++.++.+|+.|.+.+.++++++|+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~ 93 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDY 93 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCE
Confidence 4689999999999999999999999999999998753221111111111 1123578999999999999999999999
Q ss_pred EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|||+|+... +.+.|+.++.+++++|.+.+ ++++|++||...|
T Consensus 94 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vy 145 (348)
T PRK15181 94 VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTY 145 (348)
T ss_pred EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhh
Confidence 999997432 34578999999999999998 8999999987665
No 5
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.86 E-value=6.4e-21 Score=132.49 Aligned_cols=106 Identities=25% Similarity=0.323 Sum_probs=90.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+++||||+|++|++++++|+++|++|++++|+++ . .......+++++.+|+.|++++.++++++|+|||++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~-----~---~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~ 72 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLR-----K---ASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAS 72 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChH-----H---hhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence 58999999999999999999999999999999862 1 111123478999999999999999999999999987
Q ss_pred ccc-----cceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 84 SGV-----HFRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 84 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
+.. .+.+.|..++.++++++.+.+ ++|+|++|+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~ 111 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSIL 111 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccc
Confidence 632 234568899999999999999 8999999974
No 6
>PLN02214 cinnamoyl-CoA reductase
Probab=99.85 E-value=2.7e-20 Score=130.59 Aligned_cols=115 Identities=26% Similarity=0.224 Sum_probs=92.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
+|+++||||+|++|+++++.|+++|++|++++|+.+............ ...+++++.+|++|++++.++++++|+|||+
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 578999999999999999999999999999999863211111111111 1235889999999999999999999999999
Q ss_pred Ccccc-----ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 83 ISGVH-----FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 83 a~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
|++.. .++.|+.++.++++++.+.+ ++++|++||..
T Consensus 89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~ 129 (342)
T PLN02214 89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIG 129 (342)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccce
Confidence 98642 34678999999999999988 88999999853
No 7
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.84 E-value=3.8e-20 Score=129.43 Aligned_cols=120 Identities=21% Similarity=0.284 Sum_probs=93.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
|++++++||||+|+||++++++|+++|++|+++.|+++... .......+. ..+++++.+|++|++++.++++++|+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQK--KIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHH--HHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 45688999999999999999999999999998888863221 111111111 135889999999999999999999999
Q ss_pred EEeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236 80 ICTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 80 i~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~ 122 (124)
||+|+... +++.|+.++.++++++.+.+.++++|++||...|.
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 99998532 12468899999999998863378999999877653
No 8
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.84 E-value=3.6e-20 Score=128.50 Aligned_cols=114 Identities=24% Similarity=0.287 Sum_probs=92.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+|+++||||+|+||+++++.|+++|++|++++|++.... ......... ..+++++.+|+.|++.+.++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPK--KTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchh--hHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 578999999999999999999999999999998863321 111111111 2468899999999999999999999999
Q ss_pred EeCcccc---------ceecchHHHHHHHHHHHHh-CCccEEEEecCCc
Q 033236 81 CTISGVH---------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMI 119 (124)
Q Consensus 81 ~~a~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~ 119 (124)
|+|++.. .++.|+.++.++++++.+. + ++++|++||..
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~ 129 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMA 129 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHH
Confidence 9998532 2356899999999999887 6 78999999864
No 9
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.84 E-value=5.3e-20 Score=127.92 Aligned_cols=115 Identities=25% Similarity=0.321 Sum_probs=92.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+++++||||+|+||+++++.|+++|++|+++.|+.+..+ ........ ...+++++.+|+++++.+.++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK--KTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH--HHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 578999999999999999999999999999998874321 11111111 12468899999999999999999999999
Q ss_pred EeCcccc---------ceecchHHHHHHHHHHHHh-CCccEEEEecCCcc
Q 033236 81 CTISGVH---------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMIP 120 (124)
Q Consensus 81 ~~a~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~~ 120 (124)
|+|++.. ..+.|+.++.++++++.+. + ++|+|++||...
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~ 131 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAA 131 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhh
Confidence 9998642 2356789999999999885 5 789999998754
No 10
>PLN02650 dihydroflavonol-4-reductase
Probab=99.84 E-value=7.3e-20 Score=128.63 Aligned_cols=118 Identities=19% Similarity=0.227 Sum_probs=92.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
+.++++||||+|+||+++++.|+++|++|++++|+++..... ....... ..+++++.+|+.|++.+.++++++|+|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V 81 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV--KHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV 81 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH--HHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence 357899999999999999999999999999999876322111 1111111 135789999999999999999999999
Q ss_pred EEeCcccc---------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 80 ICTISGVH---------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 80 i~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
||+|+... .++.|+.++.++++++.+.+.++++|++||...|
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~ 132 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTV 132 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhc
Confidence 99997532 2356789999999999987646899999987543
No 11
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=1e-19 Score=124.05 Aligned_cols=118 Identities=21% Similarity=0.326 Sum_probs=99.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR--VDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--~d~ 78 (124)
.++++||||+|+||+|.+.+|+++|+.|++++.-...... ..+....+. .+.+.++++|++|.+.++++|+. .|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~-sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLE-SLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchh-HHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 5789999999999999999999999999999866543322 222233332 47899999999999999999984 899
Q ss_pred EEEeCc----------cccceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236 79 VICTIS----------GVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 79 vi~~a~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~ 122 (124)
|+|.|+ |..++..|+.|+.++++.+.+.+ ++.++++||+.+|-
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG 133 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYG 133 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeec
Confidence 999987 34578899999999999999999 99999999998874
No 12
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.83 E-value=1.7e-19 Score=125.83 Aligned_cols=115 Identities=20% Similarity=0.290 Sum_probs=92.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
|++|+++||||+|+||+++++.|+++| ++|++++|++.. ...........+++++.+|++|++++.++++++|+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~----~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK----QWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH----HHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 367899999999999999999999986 789999887521 11111111234688999999999999999999999
Q ss_pred EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
|||+||... .++.|+.++.++++++.+.+ ++++|++||..+
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~ 128 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA 128 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC
Confidence 999998532 23578899999999999988 789999997654
No 13
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.82 E-value=1.9e-19 Score=126.22 Aligned_cols=117 Identities=18% Similarity=0.223 Sum_probs=90.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh-h---hccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL-S---FKKQGAHLIEASFADHRSLVEAVKR--VD 77 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~~~~D~~~~~~~~~~~~~--~d 77 (124)
|+++||||+|+||+++++.|+++|++|++++|+++........... . ....+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999986422111111111 0 0124688999999999999999985 69
Q ss_pred EEEEeCccccc----------eecchHHHHHHHHHHHHhCCc---cEEEEecCCccc
Q 033236 78 VVICTISGVHF----------RSHNILMQLKLVDAIREAGNV---KKRKLNEGMIPF 121 (124)
Q Consensus 78 ~vi~~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~i~~ss~~~~ 121 (124)
+|||+|+.... .+.|+.++.+++++|.+.+ + .+++++||...|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vy 136 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELY 136 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhh
Confidence 99999985321 2457789999999999877 4 389999987665
No 14
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.82 E-value=2.7e-19 Score=124.50 Aligned_cols=117 Identities=24% Similarity=0.282 Sum_probs=91.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+|+++||||+|+||+++++.|+++|++|++++|++...... ....... ..+++++.+|++|++++.++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT--DHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH--HHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 57899999999999999999999999999988886432111 1111111 2468899999999999999999999999
Q ss_pred EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+||... .++.|+.++.++++++.+....+++|++||...|
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~ 133 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAV 133 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhe
Confidence 9998532 1356889999999999885326799999987554
No 15
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.82 E-value=2.5e-19 Score=127.68 Aligned_cols=119 Identities=25% Similarity=0.288 Sum_probs=93.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVD 77 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d 77 (124)
++++++||||+|++|+++++.|+++|++|++++|+++................+++++.+|++|++++.++++ ++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 3578999999999999999999999999999999874321110000001123478999999999999999998 589
Q ss_pred EEEEeCccc-----cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 78 VVICTISGV-----HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 78 ~vi~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+||||++.. ...+.|..++.++++++.+.+ ++++|++||...+
T Consensus 139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~ 186 (390)
T PLN02657 139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ 186 (390)
T ss_pred EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc
Confidence 999998742 234567889999999999998 8999999976543
No 16
>PLN02427 UDP-apiose/xylose synthase
Probab=99.82 E-value=1.9e-19 Score=127.99 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=89.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhh----ccCCeEEEEcccCChHHHHHHhcccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSF----KKQGAHLIEASFADHRSLVEAVKRVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~d 77 (124)
.|+++||||+|+||+++++.|+++ |++|++++|++.. ....... ...+++++.+|+.|.+.+.++++++|
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~-----~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK-----IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh-----hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 578999999999999999999998 5999999987521 1111111 12468999999999999999999999
Q ss_pred EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|||+|+... ....|+.++.+++++|.+.+ +++|++||...|
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vY 140 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVY 140 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeee
Confidence 9999997421 12367889999999998776 689999987655
No 17
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.81 E-value=4.1e-19 Score=128.37 Aligned_cols=119 Identities=23% Similarity=0.244 Sum_probs=90.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-c--------------hHHHHHhhhhccCCeEEEEcccCCh
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-D--------------IDKLQMLLSFKKQGAHLIEASFADH 66 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~D~~~~ 66 (124)
++|+++||||+|+||+++++.|+++|++|++++|..... + ....+........+++++.+|++|+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~ 125 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDF 125 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCH
Confidence 467899999999999999999999999999987532110 0 0001111111234688999999999
Q ss_pred HHHHHHhcc--cCEEEEeCcccc-------------ceecchHHHHHHHHHHHHhCCcc-EEEEecCCccc
Q 033236 67 RSLVEAVKR--VDVVICTISGVH-------------FRSHNILMQLKLVDAIREAGNVK-KRKLNEGMIPF 121 (124)
Q Consensus 67 ~~~~~~~~~--~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~ss~~~~ 121 (124)
+.+.+++++ +|+|||+|+... ..+.|+.++.++++++.+.+ ++ ++|++||...|
T Consensus 126 ~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vY 195 (442)
T PLN02572 126 EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEY 195 (442)
T ss_pred HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceec
Confidence 999999984 899999996421 13568999999999999988 65 89999988766
No 18
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.81 E-value=7.9e-19 Score=113.08 Aligned_cols=102 Identities=27% Similarity=0.407 Sum_probs=89.4
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeCcc
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISG 85 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 85 (124)
|+|+||+|++|+.++++|+++|++|+++.|+++ +.+. ..+++++.+|+.|++++.++++++|+||+++|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~--------~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPS--------KAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGG--------GHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCch--------hccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689999999999999999999999999999982 2222 688999999999999999999999999999986
Q ss_pred ccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 86 VHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
... +.....++++++.+++ ++|++++|+...|
T Consensus 71 ~~~---~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~ 102 (183)
T PF13460_consen 71 PPK---DVDAAKNIIEAAKKAG-VKRVVYLSSAGVY 102 (183)
T ss_dssp TTT---HHHHHHHHHHHHHHTT-SSEEEEEEETTGT
T ss_pred hcc---cccccccccccccccc-cccceeeeccccC
Confidence 443 3788899999999998 8999999976644
No 19
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.81 E-value=4.3e-19 Score=125.76 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=89.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
+|+++||||+|+||+++++.|.++|++|++++|..... ... .....+++.+|+.+.+.+.++++++|+|||+
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-------~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 92 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-------MSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNL 92 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-------ccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence 57899999999999999999999999999999865211 000 1123578899999999999999999999999
Q ss_pred Ccccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+... ....|+.++.++++++.+.+ ++++|++||...|
T Consensus 93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vY 141 (370)
T PLN02695 93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIY 141 (370)
T ss_pred ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhc
Confidence 97431 12357889999999999998 8999999987655
No 20
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.81 E-value=7.7e-19 Score=128.75 Aligned_cols=117 Identities=22% Similarity=0.250 Sum_probs=92.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--------ccCCeEEEEcccCChHHHHHHh
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--------KKQGAHLIEASFADHRSLVEAV 73 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~ 73 (124)
++++++|+||+|+||++++++|++.|++|++++|+....... ...+... ...+++++.+|+.|.+++.+++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l-~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL-VQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 567899999999999999999999999999999987221111 0111000 0135889999999999999999
Q ss_pred cccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 74 KRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 74 ~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
.++|+|||++|... .+..|..++.++++++.+.+ ++|||++||...
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga 211 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGT 211 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchh
Confidence 99999999998542 13457889999999999998 899999998653
No 21
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.81 E-value=1.3e-18 Score=122.40 Aligned_cols=116 Identities=24% Similarity=0.333 Sum_probs=90.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+|+++||||+|+||++++++|+++|++|++++|+++. .......+ ...+++++.+|+++++.+.++++++|+|||
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAK----SLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH 85 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHH----HHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 6899999999999999999999999999999887621 11111121 134688999999999999999999999999
Q ss_pred eCccccce------------ecc-----hHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236 82 TISGVHFR------------SHN-----ILMQLKLVDAIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 82 ~a~~~~~~------------~~~-----~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~ 122 (124)
+|+..... +.| +.++.++++++.+.+.++++|++||...|.
T Consensus 86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg 143 (353)
T PLN02896 86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLT 143 (353)
T ss_pred CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcc
Confidence 99853211 122 478999999998874368999999876663
No 22
>PLN02240 UDP-glucose 4-epimerase
Probab=99.80 E-value=9.5e-19 Score=122.80 Aligned_cols=119 Identities=21% Similarity=0.329 Sum_probs=92.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh---ccCCeEEEEcccCChHHHHHHhc--c
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF---KKQGAHLIEASFADHRSLVEAVK--R 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~--~ 75 (124)
|++++++||||+|++|+++++.|+++|++|++++|........ ....... ...+++++.+|++|++.+.++++ +
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEA-LRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHH-HHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 4467999999999999999999999999999998764322111 1111111 12468899999999999999987 5
Q ss_pred cCEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 76 VDVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 76 ~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|+|||+++... .++.|+.++.++++++.+.+ +++++++||...|
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vy 136 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVY 136 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHh
Confidence 899999997532 24567899999999999888 7899999986544
No 23
>PLN02583 cinnamoyl-CoA reductase
Probab=99.80 E-value=1.8e-18 Score=119.32 Aligned_cols=116 Identities=14% Similarity=0.251 Sum_probs=91.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+++++||||+|+||+++++.|+++|++|+++.|+++.. ........+ ...+++++.+|++|++++.+++.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET--EIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh--hHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 57899999999999999999999999999999864211 111111222 13468899999999999999999999999
Q ss_pred EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
|.+++.. .++.|+.++.++++++.+...++++|++||...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a 131 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTA 131 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHh
Confidence 9875432 246789999999999988632789999998654
No 24
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.80 E-value=6.7e-19 Score=122.16 Aligned_cols=109 Identities=28% Similarity=0.394 Sum_probs=91.6
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+++|||++|++|+++++.|+++|++|++++|++... ......+++++.+|+.|++++.++++++|+|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a 72 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR--------RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVA 72 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc--------cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence 4799999999999999999999999999999986221 11223468899999999999999999999999999
Q ss_pred cccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 84 SGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 84 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+... .++.|+.++.++++++.+.+ ++++|++||...|
T Consensus 73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~ 117 (328)
T TIGR03466 73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATL 117 (328)
T ss_pred eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhc
Confidence 7432 24568899999999999988 8999999987655
No 25
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.79 E-value=1.4e-18 Score=122.08 Aligned_cols=118 Identities=21% Similarity=0.193 Sum_probs=91.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV 78 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 78 (124)
+++|+++||||+|+||+++++.|+++|++|++++|++.... ....... ...++.++.+|++|++++.+++++ +|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP-NLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFKPEI 78 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch-hHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence 46789999999999999999999999999999998864321 1111111 123577899999999999999985 699
Q ss_pred EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|||+|+... .++.|+.++.++++++.+.+.++++|++||...|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vy 131 (349)
T TIGR02622 79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCY 131 (349)
T ss_pred EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhh
Confidence 999998431 2456889999999999876535799999986544
No 26
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.79 E-value=1.6e-18 Score=121.68 Aligned_cols=109 Identities=21% Similarity=0.308 Sum_probs=87.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC-ChHHHHHHhcccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA-DHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~d~vi~ 81 (124)
|+++||||+|++|+++++.|++. |++|++++|+. . ..... .....++++.+|+. +.+.+.++++++|+|||
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~----~-~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH 74 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT----D-RLGDL--VNHPRMHFFEGDITINKEWIEYHVKKCDVILP 74 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH----H-HHHHh--ccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence 68999999999999999999986 69999999865 1 11111 12346899999997 77888899999999999
Q ss_pred eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+++... .++.|+.++.+++++|.+.+ +++|++||...|
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vy 122 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVY 122 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceee
Confidence 987421 23457899999999999876 699999987665
No 27
>PLN02686 cinnamoyl-CoA reductase
Probab=99.79 E-value=2.7e-18 Score=121.55 Aligned_cols=115 Identities=21% Similarity=0.256 Sum_probs=90.0
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-----cCCeEEEEcccCChHHHHHHhcc
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-----KQGAHLIEASFADHRSLVEAVKR 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 75 (124)
|++|+++||||+|+||+++++.|+++|++|+++.|+.+.. .....+.... ..++.++.+|++|++++.+++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~--~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDK--EKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 4578999999999999999999999999999988875211 1111111100 13578999999999999999999
Q ss_pred cCEEEEeCcccc----------ceecchHHHHHHHHHHHHh-CCccEEEEecCC
Q 033236 76 VDVVICTISGVH----------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGM 118 (124)
Q Consensus 76 ~d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~ 118 (124)
+|+|+|+++... ..+.|+.++.++++++.+. + ++++|++||.
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~ 181 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSL 181 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccH
Confidence 999999987431 1346789999999999886 6 8999999985
No 28
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.79 E-value=1.6e-18 Score=121.38 Aligned_cols=119 Identities=20% Similarity=0.192 Sum_probs=91.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh---hhccCCeEEEEcccCChHHHHHHhcc--c
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL---SFKKQGAHLIEASFADHRSLVEAVKR--V 76 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~--~ 76 (124)
++|+++||||+|++|+++++.|+++|++|++++|+++.......+... .....+++++.+|++|.+++.+++++ +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 468899999999999999999999999999999876322111111111 01124588999999999999999885 6
Q ss_pred CEEEEeCcccc----------ceecchHHHHHHHHHHHHhCCcc-----EEEEecCCccc
Q 033236 77 DVVICTISGVH----------FRSHNILMQLKLVDAIREAGNVK-----KRKLNEGMIPF 121 (124)
Q Consensus 77 d~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~ss~~~~ 121 (124)
|+|||+|+... ..+.|+.++.++++++.+.+ ++ ++|++||...|
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vy 143 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMY 143 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHh
Confidence 99999998532 12568899999999999887 54 89999876554
No 29
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.78 E-value=4.2e-18 Score=118.97 Aligned_cols=116 Identities=24% Similarity=0.380 Sum_probs=90.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 81 (124)
|+++||||+|++|+++++.|+++|++|++++|...+.. ............++.++.+|++|++.+.++++ ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchH-hHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 57999999999999999999999999999876542221 11111222223457889999999999999987 5899999
Q ss_pred eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|+... ..+.|+.++.++++++.+.+ ++++|++||...|
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~y 128 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVY 128 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhh
Confidence 997432 23467889999999999988 8899999987554
No 30
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.78 E-value=4.4e-18 Score=114.70 Aligned_cols=117 Identities=19% Similarity=0.219 Sum_probs=87.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc---cCCeEEEEcccCChHHHHHHhc---
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK---KQGAHLIEASFADHRSLVEAVK--- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~--- 74 (124)
|++++++||||+++||..+++.|+++|++++++.|+.+.. .+....+. ...++++.+|+++++++.++.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL----~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKL----EALAKELEDKTGVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHH----HHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence 4567899999999999999999999999999999998222 22222222 2357899999999999999875
Q ss_pred ----ccCEEEEeCccccc--------------eecchHHHHHHHH----HHHHhCCccEEEEecCCcccc
Q 033236 75 ----RVDVVICTISGVHF--------------RSHNILMQLKLVD----AIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 75 ----~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~~~~ 122 (124)
.+|++|||||...+ ++.|+.+...+.+ .+.+.+ -.+||.++|...+.
T Consensus 80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~ 148 (265)
T COG0300 80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLI 148 (265)
T ss_pred hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcC
Confidence 49999999996533 3456666554444 445555 57899999877553
No 31
>PRK06182 short chain dehydrogenase; Validated
Probab=99.77 E-value=7.8e-18 Score=114.64 Aligned_cols=110 Identities=24% Similarity=0.286 Sum_probs=84.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++|||++|++|+++++.|+++|++|++++|++ ...+ .....++.++.+|++|++++.++++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~-----~~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV-----DKME---DLASLGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHH---HHHhCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 6788999999999999999999999999999999986 2222 2223458899999999999988886
Q ss_pred -ccCEEEEeCccccc--------------eecchHHH----HHHHHHHHHhCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVHF--------------RSHNILMQ----LKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
++|++||++|.... ++.|..+. ..+++.+.+.+ ..+++++||..
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~ 135 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMG 135 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchh
Confidence 58999999985421 24566664 44445555565 57899999754
No 32
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.3e-17 Score=113.86 Aligned_cols=113 Identities=17% Similarity=0.130 Sum_probs=87.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++++|++ ...+........++..+.+|++|++++.++++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE-----AARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH-----HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 357899999999999999999999999999999986 22222222223468889999999999988876
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|+||||+|.... ++.|+.++.++++++.+ .+ ..++|++||...
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~ 140 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGG 140 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccc
Confidence 37999999986421 45788889998888654 33 468999997653
No 33
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.77 E-value=6.1e-18 Score=127.43 Aligned_cols=110 Identities=18% Similarity=0.277 Sum_probs=88.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH-HHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS-LVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~d~vi 80 (124)
+|+++||||+|++|++++++|+++ |++|++++|.+.. .... ....+++++.+|++|.+. +.++++++|+||
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~----~~~~---~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi 387 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA----ISRF---LGHPRFHFVEGDISIHSEWIEYHIKKCDVVL 387 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh----hhhh---cCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence 578999999999999999999986 7999999997621 1111 123468899999998765 677889999999
Q ss_pred EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+|+... .++.|+.++.+++++|.+.+ +++|++||...|
T Consensus 388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vy 436 (660)
T PRK08125 388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVY 436 (660)
T ss_pred ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhc
Confidence 9997432 23568999999999999987 689999987655
No 34
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.77 E-value=7.2e-18 Score=112.09 Aligned_cols=108 Identities=29% Similarity=0.436 Sum_probs=89.7
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc--CEEEEeC
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV--DVVICTI 83 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~a 83 (124)
|+|+||+|++|++++++|+++|+.|+.+.|++.+.... . ...+++++.+|+.|++.+.++++.. |+|||++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----~---~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----E---KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----H---HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccc----c---ccceEEEEEeeccccccccccccccCceEEEEee
Confidence 68999999999999999999999999888887322111 1 1128899999999999999999865 9999999
Q ss_pred ccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 84 SGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 84 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+.. ...+.|+.++.++++++.+.+ +++++++||...|
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y 120 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVY 120 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGG
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence 864 224568999999999999999 7899999987655
No 35
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.77 E-value=8.9e-18 Score=114.05 Aligned_cols=121 Identities=15% Similarity=0.136 Sum_probs=92.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|.+|.++||||+++||.+++.+|++.|.+++.+.|..+..+.-..+..+.....++..+++|++|.+++.++++
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 35788999999999999999999999999988888764443332222222222358999999999999998874
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcccc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~~ 122 (124)
++|++|||||... .+++|+.|+..+.+++.+ .+ -.||+.+||...+.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM 155 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence 4899999999552 357888888777777654 44 46999999887654
No 36
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.76 E-value=6.5e-18 Score=118.06 Aligned_cols=117 Identities=25% Similarity=0.369 Sum_probs=93.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
++.+++||||+|++|+++++.|++.+ .++++++..+...... .....+.+..++++++|+.+..++.+++.++ .|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~--~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V 79 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLP--AELTGFRSGRVTVILGDLLDANSISNAFQGA-VV 79 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccc--hhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence 35679999999999999999999988 8999999887311101 1111113567899999999999999999999 77
Q ss_pred EEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236 80 ICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 80 i~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~ 122 (124)
+||++.. ...+.|+.|+.+++++|.+.| ++++||+||..+.|
T Consensus 80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVF 131 (361)
T ss_pred EEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEe
Confidence 7776522 235789999999999999999 99999999987665
No 37
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.76 E-value=2.7e-17 Score=110.98 Aligned_cols=111 Identities=28% Similarity=0.360 Sum_probs=88.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC-hHHHHHHh-cccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD-HRSLVEAV-KRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~-~~~d~vi 80 (124)
+|+++||||+|++|+++++.|++.|++|+++.|+++ ....... ...+++++.+|+++ .+.+.+.+ .++|+||
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~~~~~--~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD----KAKTSLP--QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH----HHHHhcc--cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 578999999999999999999999999999999872 1111111 13468899999998 46777777 6899999
Q ss_pred EeCcccc------ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 81 CTISGVH------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 81 ~~a~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
+++|... ....|..++.++++++.+.+ ++++|++||...
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v 135 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILV 135 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccc
Confidence 9987532 13567789999999999888 799999997653
No 38
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.76 E-value=7.8e-18 Score=116.12 Aligned_cols=108 Identities=32% Similarity=0.477 Sum_probs=89.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc-CEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV-DVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-d~vi~~ 82 (124)
|+|+|||++|++|+++++.|.+.|++|++++|...... ... .+++++.+|+++.+...++.+.. |+|+|+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~ 71 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD--------PLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHL 71 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc--------ccc-cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence 34999999999999999999999999999999872211 111 46789999999999999999888 999999
Q ss_pred Ccccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
++... +...|+.++.++++++.+.+ +++++++||...+
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~ 120 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVV 120 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceE
Confidence 97441 45689999999999999977 8999997765544
No 39
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.76 E-value=1.6e-18 Score=118.07 Aligned_cols=112 Identities=21% Similarity=0.260 Sum_probs=80.6
Q ss_pred EEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeE----EEEcccCChHHHHHHhc--ccCE
Q 033236 6 VLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAH----LIEASFADHRSLVEAVK--RVDV 78 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~D~~~~~~~~~~~~--~~d~ 78 (124)
|+||||+|.||+.++++|++.+ .+++++++++........+........++. .+.+|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 6899999999999999999987 789999999733222222222222334443 45899999999999999 7999
Q ss_pred EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
|+|.|+.-+ ....|+.|+.|+++++.+.+ ++++|++|+-
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTD 129 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTD 129 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEEC
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccc
Confidence 999998432 34689999999999999999 9999999964
No 40
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.75 E-value=3e-17 Score=109.52 Aligned_cols=107 Identities=33% Similarity=0.431 Sum_probs=87.9
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeCcc
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISG 85 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 85 (124)
|+|+||+|.+|+.+++.|++.+++|+++.|++ . .+..+.+...+++++.+|+.|++++.++++++|.|+++.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~----~--~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP----S--SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS----H--HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEecc----c--hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 68999999999999999999999999999997 1 12233344578899999999999999999999999999885
Q ss_pred ccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 86 VHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.. ........++++++.+.| +++||++|...++
T Consensus 75 ~~--~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~ 107 (233)
T PF05368_consen 75 SH--PSELEQQKNLIDAAKAAG-VKHFVPSSFGADY 107 (233)
T ss_dssp SC--CCHHHHHHHHHHHHHHHT--SEEEESEESSGT
T ss_pred ch--hhhhhhhhhHHHhhhccc-cceEEEEEecccc
Confidence 54 455777899999999999 9999998855443
No 41
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.75 E-value=4.6e-17 Score=110.94 Aligned_cols=111 Identities=17% Similarity=0.193 Sum_probs=86.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
.|+++||||+|+||++++++|+++|++|+++.|++ ...+........++.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRP-----DALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999986 22222222223468899999999999888765 3
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
+|+|||++|... .++.|+.++.++++++. +.+ ..++|++||..
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 137 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEG 137 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcc
Confidence 799999998542 13468899999999973 344 57899988754
No 42
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.75 E-value=2.2e-17 Score=116.10 Aligned_cols=114 Identities=19% Similarity=0.302 Sum_probs=85.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEE-EeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcc--cCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYV-LQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKR--VDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~--~d~v 79 (124)
++++||||+|++|+++++.|+++|+++++ ++|...... ....... ...+++++.+|+.|++++.+++++ +|+|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGN---LMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccc---hhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 68999999999999999999999987554 444331110 1111111 124678899999999999999985 8999
Q ss_pred EEeCcccc----------ceecchHHHHHHHHHHHHh---------CCccEEEEecCCccc
Q 033236 80 ICTISGVH----------FRSHNILMQLKLVDAIREA---------GNVKKRKLNEGMIPF 121 (124)
Q Consensus 80 i~~a~~~~----------~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~ss~~~~ 121 (124)
||+||... ..+.|+.++.++++++.+. + +++++++||...|
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vy 138 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVY 138 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhc
Confidence 99998542 2357899999999999863 3 5799999986654
No 43
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.75 E-value=2.3e-17 Score=124.45 Aligned_cols=117 Identities=15% Similarity=0.259 Sum_probs=90.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhC--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh--cccCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQ--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV--KRVDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~ 78 (124)
.|+|+||||+|+||+++++.|+++ +++|++++|........ .........+++++.+|+.|++.+..++ .++|+
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~--~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK--NLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh--hhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 589999999999999999999987 68999888753111111 1111112357899999999999888876 57999
Q ss_pred EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|||+|+... +.+.|+.++.++++++.+.+.++++|++||...|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vy 136 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY 136 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHh
Confidence 999998643 2357889999999999988657899999987654
No 44
>PRK06194 hypothetical protein; Provisional
Probab=99.75 E-value=6.1e-17 Score=110.83 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=85.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
++++++||||+|+||+++++.|+++|++|++++|+.... .+....+. ..++.++.+|++|++++.++++.
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL----DRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999976221 12222221 33577899999999999988864
Q ss_pred ---cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCC-----ccEEEEecCCccc
Q 033236 76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGN-----VKKRKLNEGMIPF 121 (124)
Q Consensus 76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~-----~~~~i~~ss~~~~ 121 (124)
+|+||||||... .++.|+.++.++++++ .+.+. ..+++++||...+
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 152 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL 152 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence 799999998542 1357788888877774 33431 1489998887544
No 45
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.75 E-value=6.9e-17 Score=108.72 Aligned_cols=116 Identities=14% Similarity=0.103 Sum_probs=85.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|.+++++|||++|++|++++++|+++|++|++++|++...+ +..... ...++.++.+|++|++++.++++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 77 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA----AAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE 77 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH----HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999873221 111111 23568899999999999988876
Q ss_pred ---ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236 75 ---RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ---~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~ 121 (124)
++|+|||+++.... ++.|+.++.++.+.+ .+.+ .++++++||...+
T Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~ 144 (258)
T PRK12429 78 TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGL 144 (258)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhc
Confidence 47999999985321 245667755544444 4455 6899999976543
No 46
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.75 E-value=1.3e-17 Score=115.22 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=80.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 81 (124)
|+++||||+|+||+++++.|+++| +|++++|.. ..+.+|++|++.+.++++ ++|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~-------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS-------------------TDYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc-------------------ccccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 579999999999999999999999 788888764 134689999999999998 5899999
Q ss_pred eCccccc----------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 82 TISGVHF----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 82 ~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|+.... ...|+.++.+++++|.+.+ + ++|++||..+|
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy 108 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVF 108 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEE
Confidence 9985421 2478899999999999998 4 79999987655
No 47
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.6e-17 Score=112.40 Aligned_cols=109 Identities=16% Similarity=0.280 Sum_probs=84.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------- 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------- 74 (124)
+++++||||+|++|+++++.|+++|++|++++|++ ...+ .+...+++++.+|++|++++.++++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~-----~~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKE-----EDVA---ALEAEGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHH---HHHHCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999999986 2222 2223467899999999998888765
Q ss_pred ccCEEEEeCcccc--------------ceecchHH----HHHHHHHHHHhCCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILM----QLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.+ +..+++.+.+.+ ..++|++||...
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~ 138 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILG 138 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhh
Confidence 3699999997532 13466666 455666666666 679999998654
No 48
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.6e-17 Score=113.15 Aligned_cols=116 Identities=16% Similarity=0.040 Sum_probs=84.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
++++++||||+|+||.++++.|+++|++|++++|+....+.. .+.+.. ....++.++.+|++|.+++.++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAA-AARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 467899999999999999999999999999999986222111 111111 123467899999999999988865
Q ss_pred -ccCEEEEeCcccc------------ceecchHH----HHHHHHHHHHhCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVH------------FRSHNILM----QLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|+.+ +..+++.+.+.+ ..++|++||..
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~ 154 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGG 154 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHH
Confidence 4899999998431 24567777 445555555555 46999998754
No 49
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.74 E-value=3.5e-17 Score=110.46 Aligned_cols=115 Identities=9% Similarity=0.073 Sum_probs=84.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
++++++|||++|++|+++++.|+++|++|++++|+++...+. .+.... ...++.++++|++|++++.+++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAV-ADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHHHHh-cCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999987322111 111111 134577899999999999888764
Q ss_pred -cCEEEEeCccccc--------------eecchHH----HHHHHHHH-HHhCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVHF--------------RSHNILM----QLKLVDAI-REAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~~--------------~~~~~~~----~~~~~~~~-~~~~~~~~~i~~ss~~ 119 (124)
+|+||||+|.... .+.|+.+ +..+++.+ .+.+ .++++++||..
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~ 146 (262)
T PRK13394 84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVH 146 (262)
T ss_pred CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchh
Confidence 8999999985421 2356666 55566666 5555 68999999753
No 50
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.74 E-value=4.7e-17 Score=114.33 Aligned_cols=116 Identities=20% Similarity=0.277 Sum_probs=85.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi 80 (124)
|+++||||+|++|+++++.|+++|++ |+.+++............. ....+++++.+|++|.+++.+++++ +|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADV--SDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhc--ccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 47999999999999999999999965 5555553211111111111 0124578899999999999999974 89999
Q ss_pred EeCcccc----------ceecchHHHHHHHHHHHHh--------CCccEEEEecCCccc
Q 033236 81 CTISGVH----------FRSHNILMQLKLVDAIREA--------GNVKKRKLNEGMIPF 121 (124)
Q Consensus 81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~ss~~~~ 121 (124)
|+|+... ..+.|+.++.+++++|.+. +.++++|++||...|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY 137 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc
Confidence 9998532 3567899999999999874 125689999987554
No 51
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.74 E-value=1.3e-16 Score=107.08 Aligned_cols=117 Identities=17% Similarity=0.095 Sum_probs=87.6
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||+++++.|+++|++|++++|+.+...+...+.+.. ...++.++++|+++++++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 34678999999999999999999999999999988752211111111111 13457889999999999988876
Q ss_pred -ccCEEEEeCccc--------cceecchHHHHHHHHHHHHhC-CccEEEEecCC
Q 033236 75 -RVDVVICTISGV--------HFRSHNILMQLKLVDAIREAG-NVKKRKLNEGM 118 (124)
Q Consensus 75 -~~d~vi~~a~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~ 118 (124)
++|++||+++.. ...+.|..++.++++++.+.- ...++|++||.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 489999999743 235678999999999998752 12489988874
No 52
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.74 E-value=7e-17 Score=110.12 Aligned_cols=114 Identities=19% Similarity=0.190 Sum_probs=86.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|++|+++++.|+++|++|++++|+++ ............+..+++|++|++++.++++
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTA-----TLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 77889999999999999999999999999999999862 1221212123457888999999999888765
Q ss_pred -ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~ 120 (124)
++|++|||+|.... ++.|+.++..+++.+ .+.+ .+++|++||...
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~ 139 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGG 139 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhh
Confidence 37999999985421 346788877777665 4455 578999997653
No 53
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.74 E-value=4.8e-17 Score=112.25 Aligned_cols=115 Identities=20% Similarity=0.308 Sum_probs=86.3
Q ss_pred eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVI 80 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi 80 (124)
+++||||+|++|++++++|++.| ++|++++|..........+.. ....+++++.+|++|++++.+++++ +|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADL--EDNPRYRFVKGDIGDRELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhh--ccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence 58999999999999999999887 789888764311111111111 1124688999999999999999987 89999
Q ss_pred EeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 81 CTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 81 ~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+++... +.+.|+.++.++++++.+.+...+++++||...|
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~ 129 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVY 129 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecccee
Confidence 9998543 2356889999999999887522389999976544
No 54
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.73 E-value=3.8e-17 Score=118.12 Aligned_cols=109 Identities=18% Similarity=0.305 Sum_probs=84.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
.|+|+||||+|+||++++++|+++|++|++++|......+ .....+...+++++.+|+.++. +.++|+|||+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHl 190 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHL 190 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh-----hcCCCEEEEe
Confidence 5789999999999999999999999999999876422111 1111223456888999987653 4579999999
Q ss_pred Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+... ..+.|+.++.+++++|.+.+ + ++|++||...|
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VY 237 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVY 237 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHh
Confidence 97431 23578999999999999998 5 89999988765
No 55
>PRK09186 flagellin modification protein A; Provisional
Probab=99.73 E-value=7.3e-17 Score=108.64 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=81.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
|.+|+++||||+|+||+++++.|+++|++|++++|++...+....+.........+.++.+|++|++++.+++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 346889999999999999999999999999999988632211111111111233466789999999999988864
Q ss_pred --cCEEEEeCcccc-----------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCc
Q 033236 76 --VDVVICTISGVH-----------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 --~d~vi~~a~~~~-----------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~ 119 (124)
+|++||||+... ..+.|..+...+++ .+.+.+ .++++++||..
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~ 147 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIY 147 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechh
Confidence 799999996421 12334555544444 444455 57999999754
No 56
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.73 E-value=1.1e-16 Score=105.96 Aligned_cols=115 Identities=13% Similarity=0.117 Sum_probs=88.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+|.++||||+++||.++++.|++.|++|++..|+. +.......++....+..+..|++|+++++++++ +
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~----drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARRE----ERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH----HHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence 46789999999999999999999999999999997 222222222233467899999999998777765 4
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcccc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~~ 122 (124)
+|++|||||... ..+.|+.|..+..+++.+ ++ ..++|.+||....+
T Consensus 82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~ 145 (246)
T COG4221 82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRY 145 (246)
T ss_pred ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccc
Confidence 899999998431 246789998888877754 44 45999999887443
No 57
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.73 E-value=4.9e-17 Score=110.43 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=85.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
+++++||||+|++|+++++.|+++|++|++++|++... . ...+++++++|++|++++++++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~--------~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA--------A--PIPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------c--ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 56799999999999999999999999999999986211 1 124678999999999999998874
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~ 120 (124)
+|++|||+|... .++.|..++.++++++ .+.+ .+++|++||...
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~ 135 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLG 135 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccc
Confidence 699999998642 1346777777777775 4455 679999998653
No 58
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.8e-17 Score=121.49 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=88.4
Q ss_pred ceEEEEccCChhcHHHHHHHh--hCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh------HHHHHHhcc
Q 033236 4 SKVLVVGGTGYIGRRIVKASL--AQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH------RSLVEAVKR 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~ 75 (124)
|+++||||+|+||+++++.|+ +.|++|++++|++.. .........+...+++++.+|+.|+ +.++++ ++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence 589999999999999999999 578999999996521 1111111112235789999999984 466666 88
Q ss_pred cCEEEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 76 VDVVICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 76 ~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|+|||+|+..+ ....|+.++.++++++.+.+ +++++++||...|
T Consensus 78 ~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~ 129 (657)
T PRK07201 78 IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVA 129 (657)
T ss_pred CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccc
Confidence 999999998543 24578999999999999998 7999999987654
No 59
>PLN02996 fatty acyl-CoA reductase
Probab=99.73 E-value=1.1e-16 Score=117.00 Aligned_cols=120 Identities=18% Similarity=0.228 Sum_probs=90.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHH-H-H------hh-----------hhccCCeEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKL-Q-M------LL-----------SFKKQGAHLI 59 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~-~-~------~~-----------~~~~~~~~~~ 59 (124)
.+++++||||+|++|+++++.|++.+ .+|+++.|.....+.... . . .. .+...+++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 46899999999999999999998764 478999998754332211 0 0 00 0112578999
Q ss_pred EcccC-------ChHHHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 60 EASFA-------DHRSLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 60 ~~D~~-------~~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.+|++ +.+.+..+++++|+|||+|+..+. ...|+.++.++++++.+.+.+++++++||..+|
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy 165 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC 165 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence 99998 445577888999999999986543 357899999999999886337899999987765
No 60
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.72 E-value=5.3e-17 Score=117.76 Aligned_cols=116 Identities=23% Similarity=0.283 Sum_probs=95.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 78 (124)
.+|+++||||+|.+|+.+++++++.+ .++++++|++.....-..+....++...+..+-+|+.|.+.+.+++++ +|+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 47899999999999999999999987 788999999733322233333333346788999999999999999998 999
Q ss_pred EEEeCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 79 VICTISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 79 vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
|+|.|+.-+ ....|+.|++|++++|.+.+ +++++.+|+-
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTD 377 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTD 377 (588)
T ss_pred EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecC
Confidence 999998432 24579999999999999999 9999999963
No 61
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.72 E-value=1.6e-16 Score=106.07 Aligned_cols=114 Identities=14% Similarity=0.144 Sum_probs=85.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR--- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~--- 75 (124)
|++++++|||++|++|+++++.|+++|++|++++|++... ....... ...++.++.+|++|++++.+++++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA----EALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVE 78 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4457899999999999999999999999999999987221 1111111 134578999999999998888764
Q ss_pred ----cCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 76 ----VDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
+|++||++|.... ++.|+.+..++++++. +.+ .++++++||..
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~ 143 (246)
T PRK05653 79 AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVS 143 (246)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHH
Confidence 5999999975421 3456777888887775 345 57999998754
No 62
>PRK05865 hypothetical protein; Provisional
Probab=99.72 E-value=9.9e-17 Score=122.58 Aligned_cols=103 Identities=23% Similarity=0.262 Sum_probs=89.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+++||||+|++|+++++.|+++|++|++++|+... . ...+++++.+|+.|++++.++++++|+|||+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~-------~----~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA 69 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD-------S----WPSSADFIAADIRDATAVESAMTGADVVAHCA 69 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh-------h----cccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence 579999999999999999999999999999987511 0 12357899999999999999999999999999
Q ss_pred cccc-ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 84 SGVH-FRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 84 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
+... ..+.|+.++.++++++.+.+ ++++|++||.
T Consensus 70 a~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~ 104 (854)
T PRK05865 70 WVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSG 104 (854)
T ss_pred CcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCc
Confidence 7543 45678999999999999998 8899999975
No 63
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.72 E-value=2.4e-16 Score=105.68 Aligned_cols=115 Identities=21% Similarity=0.175 Sum_probs=86.5
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++|+++||||+|++|.++++.|+++|++|++++|++... ......+ ....+.++.+|++|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA----AATAELVEAAGGKARARQVDVRDRAALKAAVAAGVE 79 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999986221 1111111 12458899999999999999886
Q ss_pred ---ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 75 ---RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ---~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++|+|||++|.... .+.|+.+..++++++. +.+ .++++++||...
T Consensus 80 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~ 145 (251)
T PRK12826 80 DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAG 145 (251)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHh
Confidence 58999999975431 2456777777887774 344 578998887654
No 64
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.72 E-value=1.1e-16 Score=115.54 Aligned_cols=109 Identities=18% Similarity=0.317 Sum_probs=83.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
.|+|+||||+|+||+++++.|+++|++|++++|...+.... .. ......+++++.+|+.++ .+.++|+|||+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~-~~--~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHl 191 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKEN-LV--HLFGNPRFELIRHDVVEP-----ILLEVDQIYHL 191 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhH-hh--hhccCCceEEEECccccc-----cccCCCEEEEC
Confidence 47899999999999999999999999999999864221111 11 111234678888998665 34679999999
Q ss_pred Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+... .++.|+.++.+++++|.+.+ + ++|++||..+|
T Consensus 192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VY 238 (436)
T PLN02166 192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVY 238 (436)
T ss_pred ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHh
Confidence 97432 23578999999999999988 4 89999987665
No 65
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=2.3e-16 Score=105.35 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=86.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++|+++||||+|++|++++++|+++|++|+++.|+.........+... ....++.++.+|+++++++.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE-ALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH-hcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 4467899999999999999999999999998877776221111111111 123568899999999999988875
Q ss_pred -ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236 75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~ 121 (124)
++|++||++|.... .+.|..+..++.+.+ .+.+ .++++++||...+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~ 147 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGL 147 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccC
Confidence 47999999984321 235667777777776 3455 6899999976543
No 66
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.4e-16 Score=108.77 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=84.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|++++++||||+|++|+++++.|+++|++|++++|++...+.. ........ +.+++++.+|++|++++.+ ++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~ 78 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENL-LSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE 78 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence 7788899999999999999999999999999999986221111 11111111 2468899999999998876 43
Q ss_pred --ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... ..+.|+.++.++++.+ .+.+ ..+++++||..
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~ 142 (280)
T PRK06914 79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSIS 142 (280)
T ss_pred cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccc
Confidence 3799999998532 1246777877777775 4455 57899988754
No 67
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.8e-16 Score=104.56 Aligned_cols=113 Identities=18% Similarity=0.155 Sum_probs=86.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++|+|++|++|+++++.|+++|++|++++|++. ...+..+.+...+.+++.+|+.|.+++.++++ +
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAA----PLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChH----hHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999999999872 22222223334567888999999999988876 4
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
+|+|+|++|... .+..|..++.++++++.+ .+ .++++++||...
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~ 144 (239)
T PRK12828 83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAA 144 (239)
T ss_pred cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHh
Confidence 899999998532 133567777777777753 44 679999997653
No 68
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.71 E-value=1.3e-16 Score=109.31 Aligned_cols=100 Identities=19% Similarity=0.243 Sum_probs=83.6
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHh------cc-cC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV------KR-VD 77 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~-~d 77 (124)
+++||||+|++|++++++|++.|++|++++|+++.. ...+++.+.+|+.|++++.+++ ++ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~-----------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS-----------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc-----------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 489999999999999999999999999999998321 1246778889999999999998 56 99
Q ss_pred EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
.++++++... .......++++++.+.| ++|+|++|+..
T Consensus 70 ~v~~~~~~~~---~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~ 107 (285)
T TIGR03649 70 AVYLVAPPIP---DLAPPMIKFIDFARSKG-VRRFVLLSASI 107 (285)
T ss_pred EEEEeCCCCC---ChhHHHHHHHHHHHHcC-CCEEEEeeccc
Confidence 9999987432 22456788999999999 89999999754
No 69
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.71 E-value=5e-17 Score=109.65 Aligned_cols=110 Identities=21% Similarity=0.300 Sum_probs=74.6
Q ss_pred EEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchH-HH-HHhh------h---hccCCeEEEEcccCCh------HH
Q 033236 8 VVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDID-KL-QMLL------S---FKKQGAHLIEASFADH------RS 68 (124)
Q Consensus 8 i~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~-~~-~~~~------~---~~~~~~~~~~~D~~~~------~~ 68 (124)
||||+|++|++++++|++.+. +|+|+.|..+..+.. +. +.+. . ....+++++.+|++++ ++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999875 999999987431111 11 0110 0 1257899999999975 57
Q ss_pred HHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 69 LVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 69 ~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
+..+.+++|+|||||+.+++ .+.|+.|++++++.|.+.+ .++++|+||.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa 136 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTA 136 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEG
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccc
Confidence 88888899999999987654 4679999999999999766 5699999984
No 70
>PRK06128 oxidoreductase; Provisional
Probab=99.71 E-value=2.7e-16 Score=108.56 Aligned_cols=119 Identities=15% Similarity=0.132 Sum_probs=87.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH-HHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID-KLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
++|+++||||+|+||+++++.|+++|++|++..++....... ..+.... ...++.++.+|+++++++.++++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999998887765221111 1111211 23457789999999999888875
Q ss_pred -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236 75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~ 121 (124)
++|++|||+|... .++.|+.++.++++++.+.- .-.++|++||...|
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~ 196 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY 196 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc
Confidence 4799999998531 24568889999999997642 12589999887654
No 71
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.71 E-value=3.8e-16 Score=104.55 Aligned_cols=119 Identities=16% Similarity=0.139 Sum_probs=88.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
++|+++||||+|+||+++++.|+++|++|+++.|..........+..... ....+.++.+|+++++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999998765422212211111111 13468899999999999988875
Q ss_pred --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH-----HhCCccEEEEecCCccc
Q 033236 75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR-----EAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ss~~~~ 121 (124)
++|+|||++|... .++.|..++.++++++. +.+ .++++++||...+
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~ 151 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGV 151 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhc
Confidence 4899999998643 13567888999998887 344 5789999876543
No 72
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.71 E-value=1.5e-16 Score=106.68 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=85.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
.+++++||||+|++|.++++.|+++|++|++++|++... ......+. ..++.++.+|++|++++.++++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA----ERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 468899999999999999999999999999999987221 11111111 3457899999999999998876
Q ss_pred -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236 75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~ 121 (124)
++|+|||++|... .++.|+.++.++.+.+.+ .+ .++++++||...+
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~ 145 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGL 145 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc
Confidence 3799999998531 134566776666666654 44 5789999876543
No 73
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.4e-16 Score=106.52 Aligned_cols=114 Identities=16% Similarity=0.072 Sum_probs=85.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh----ccCCeEEEEcccCChHHHHHHhc---
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF----KKQGAHLIEASFADHRSLVEAVK--- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~--- 74 (124)
++|+++|||++|+||+++++.|+++|++|++++|++.. ..+....+ ...++.++++|++|++++..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL----AERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999998622 11222222 23457899999999999988876
Q ss_pred ----ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 ----RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ----~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|++|||+|.... ++.|+.++..+++++.+ .+ ..++|++||...
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 148 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHA 148 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhh
Confidence 48999999985321 34577777777777654 33 468999987643
No 74
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.6e-16 Score=110.40 Aligned_cols=117 Identities=13% Similarity=0.136 Sum_probs=85.1
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
|++++++||||+++||.++++.|+++|++|++.+|+.+..+... +.+... ....+.++.+|++|.++++++++.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~-~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAV-AAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999863221111 111111 124578999999999999888753
Q ss_pred ---cCEEEEeCcccc-------------ceecchHHHHHHHHHHHH---hCCccEEEEecCCc
Q 033236 76 ---VDVVICTISGVH-------------FRSHNILMQLKLVDAIRE---AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ---~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~ 119 (124)
+|++|||||... .++.|+.+...+.+.+.+ .+ ..++|++||..
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~ 152 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIA 152 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechh
Confidence 899999998542 134577777776666653 22 35888888764
No 75
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.8e-16 Score=107.38 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=87.2
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc---
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR--- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--- 75 (124)
|++++++||||+|+||+++++.|+++|++|++.+|+++.. .+..+.+. ..++.++.+|++|++++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l----~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGL----RQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999886221 12222222 23577899999999999888764
Q ss_pred ----cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236 76 ----VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF 121 (124)
Q Consensus 76 ----~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~ 121 (124)
+|++|||||... .++.|+.+..++++++.+ .+...+++++||...+
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~ 147 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL 147 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc
Confidence 799999998531 135678888888888753 3313589999876543
No 76
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.71 E-value=3.5e-16 Score=105.49 Aligned_cols=113 Identities=19% Similarity=0.196 Sum_probs=86.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
++++++||||+|++|+++++.|+++|++|++++|++. ........+. +.++..+.+|++|++++.+++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPA----KLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999862 2111122222 23578899999999999988764
Q ss_pred ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236 76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI 119 (124)
Q Consensus 76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~ 119 (124)
+|++||++|... .+..|..++.++++++.+. + ..+++++||..
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~ 148 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQ 148 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccch
Confidence 799999998532 1246778888888887653 4 56899998754
No 77
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.71 E-value=6.8e-16 Score=102.86 Aligned_cols=112 Identities=21% Similarity=0.197 Sum_probs=84.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
+++++|+||+|++|+++++.|++.|++|++++|++. ...+....+. ..++.++++|+++++++.++++
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQK----ELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHH----HHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999862 2112222221 1568899999999999888776
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~ 119 (124)
++|+|||++|... .++.|+.+...+++++.+. + ..+++++||..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~ 142 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLA 142 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChh
Confidence 5899999998542 1345777778888777643 3 46788888764
No 78
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.4e-16 Score=104.52 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=87.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
++++++||||+|++|.++++.|+++|++|++++|++.. ..+..+.+ ...++..+.+|+++++++.++++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEG----AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999998621 11111111 12356789999999999888776
Q ss_pred --ccCEEEEeCcccc-----------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCccc
Q 033236 75 --RVDVVICTISGVH-----------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIPF 121 (124)
Q Consensus 75 --~~d~vi~~a~~~~-----------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~~ 121 (124)
++|+|||++|... ..+.|+.++.++++++.+.. ..++++++||...|
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW 149 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc
Confidence 4799999998531 13578888888888887541 13689999987654
No 79
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.70 E-value=3.5e-16 Score=103.52 Aligned_cols=111 Identities=22% Similarity=0.287 Sum_probs=80.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVD 77 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d 77 (124)
|++|+++||||+|++|+++++.|+++ ++|++++|++. . .+.... ....++++++|++|++++.++++ ++|
T Consensus 1 ~~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~----~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id 73 (227)
T PRK08219 1 MERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAE----R-LDELAA-ELPGATPFPVDLTDPEAIAAAVEQLGRLD 73 (227)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHH----H-HHHHHH-HhccceEEecCCCCHHHHHHHHHhcCCCC
Confidence 66789999999999999999999999 99999999861 1 111111 12357899999999999999887 599
Q ss_pred EEEEeCccccc--------------eecchHHH----HHHHHHHHHhCCccEEEEecCCcc
Q 033236 78 VVICTISGVHF--------------RSHNILMQ----LKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 78 ~vi~~a~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
+|||++|.... .+.|..+. .++++.+.+.+ .+++++||...
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~ 132 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAG 132 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHh
Confidence 99999985421 23445554 34444444443 68888887553
No 80
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.70 E-value=3.3e-16 Score=105.56 Aligned_cols=116 Identities=19% Similarity=0.186 Sum_probs=87.0
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++|+++||||+|+||+++++.|+++|++|++++|++... .+...... ..++..+.+|++|++++.++++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERL----DEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999986221 11111211 3467899999999999888775
Q ss_pred ---ccCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC--CccEEEEecCCcc
Q 033236 75 ---RVDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG--NVKKRKLNEGMIP 120 (124)
Q Consensus 75 ---~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~ 120 (124)
++|++||++|.... ++.|..+...+++++.+.. ...++|++||...
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~ 144 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL 144 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh
Confidence 47999999985321 3467788888888887531 1258999987653
No 81
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.70 E-value=5.7e-16 Score=104.67 Aligned_cols=114 Identities=18% Similarity=0.138 Sum_probs=84.1
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|++|+++++.|+++|++|++++|+++ ...+........++.++.+|++|++++.++++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA----ALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF 84 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999862 11121222222367889999999999888775
Q ss_pred -ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCc-cEEEEecCCc
Q 033236 75 -RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNV-KKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~-~~~i~~ss~~ 119 (124)
++|+|||++|... .++.|..++.++.+++.+ .+ . ++++++||..
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~ 149 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVA 149 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccc
Confidence 5899999998651 134567787777777643 33 3 5677777644
No 82
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.70 E-value=4.2e-16 Score=108.56 Aligned_cols=114 Identities=16% Similarity=0.161 Sum_probs=85.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
++++++||||+|+||.++++.|+++|++|++++|+... .....+.+ ....+.++.+|+++.+++.++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK----AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999998621 11112222 234688999999999999888763
Q ss_pred ---cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CC-ccEEEEecCCc
Q 033236 76 ---VDVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GN-VKKRKLNEGMI 119 (124)
Q Consensus 76 ---~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~-~~~~i~~ss~~ 119 (124)
+|++|||||... .++.|+.++.++++.+.+. +. ..|+|++||..
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~ 147 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVT 147 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccc
Confidence 899999998431 1357788888887777652 21 24899998754
No 83
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.70 E-value=5.1e-16 Score=104.89 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=86.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
++++++||||+|+||.++++.|+++|++|++++|+++ ........+ ...++.++.+|++|+++++++++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAE----ELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999762 111111111 23467789999999999977665
Q ss_pred --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh-----CCccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA-----GNVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~ss~~ 119 (124)
++|++||++|... .++.|..++.++++++.+. + ..+++++||..
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~ 151 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVA 151 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChh
Confidence 4799999998531 1347788899999987654 4 56899998754
No 84
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.7e-16 Score=105.83 Aligned_cols=113 Identities=12% Similarity=0.013 Sum_probs=83.5
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||+++++.|+++|++|++.+|++ ...+..... -.++.++.+|++|++++.++++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDE-----ALAKETAAE-LGLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHH-hccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568899999999999999999999999999999986 222111110 1257889999999998877765
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.+...+++.+. +.+ ..+++++||...
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 140 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAG 140 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccc
Confidence 3799999998542 13456777666666654 445 568999997654
No 85
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.6e-16 Score=105.09 Aligned_cols=112 Identities=18% Similarity=0.148 Sum_probs=83.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
+|+++||||+|+||+++++.|+++|++|++++|++. ...+..+.... .++.++.+|++|++++.++++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTD----ALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999999999862 21122222221 1688999999999999888764
Q ss_pred -cCEEEEeCcccc---------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVH---------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~---------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~ 119 (124)
+|++||++|... ..+.|+.++.++++ .+.+.+ ..+++++||..
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~ 140 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVA 140 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechh
Confidence 799999998532 12456777777666 444454 57899888754
No 86
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.70 E-value=8.3e-16 Score=103.36 Aligned_cols=110 Identities=18% Similarity=0.165 Sum_probs=81.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV 76 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 76 (124)
|+++||||+|++|.++++.|+++|++|++++|++ ...+........++.++.+|++|++++.++++ ++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ-----ERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999999999999986 22222222123468899999999999888775 58
Q ss_pred CEEEEeCcccc---------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 77 DVVICTISGVH---------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 77 d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
|++||++|... .++.|..++.++++.+ .+.+ ..+++++||..
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~ 136 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTA 136 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcc
Confidence 99999998531 1345666755555555 4455 57899998764
No 87
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.9e-16 Score=107.07 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=83.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
.+++++||||+|+||+++++.|+++|++|++++|+... ..+..+.+. ...+.++.+|++|++++.++++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~----l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL----LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999998622 111111111 2357789999999999988887
Q ss_pred --ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|..+..++++++. +.+ ..+++++||..
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~ 180 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWG 180 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChh
Confidence 5899999998531 12346667666666554 455 57899998753
No 88
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.5e-16 Score=104.43 Aligned_cols=117 Identities=19% Similarity=0.232 Sum_probs=85.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|++|+++++.|+++|++|++.+|++...+....+........++.++.+|+++++++.++++
T Consensus 1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999862211111111111123468899999999998888765
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
++|++||++|... .++.|+.+..++++++. +.+ ..+++++||..
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~ 142 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVS 142 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccc
Confidence 4899999998432 13467777777777764 345 57899888754
No 89
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.69 E-value=3.6e-16 Score=104.99 Aligned_cols=113 Identities=14% Similarity=0.088 Sum_probs=84.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
++++++||||+|++|+++++.|+++|++|+++.|+.+. ........ ...++..+++|++|++++.++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEA----AERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHH----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999998622 11111111 23457899999999999988876
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|+|||++|... .++.|+.++.++.+.+ .+.+ .++++++||..
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~ 142 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQL 142 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChh
Confidence 5899999998532 1346677776666555 3455 57899998753
No 90
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.69 E-value=8.8e-16 Score=104.10 Aligned_cols=114 Identities=17% Similarity=0.192 Sum_probs=86.6
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||+|++|.++++.|+++|++|++++|++.. ..+....+ ...++.++.+|+++++++.++++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ----LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999998621 11111111 13468899999999999988776
Q ss_pred ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH-----hCCccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE-----AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~ss~~ 119 (124)
++|+|||+||... .++.|..++.++.+++.+ .+ ..+++++||..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~ 149 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTM 149 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEcccc
Confidence 4799999998431 134678888888888864 33 46899888754
No 91
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.69 E-value=4.2e-16 Score=105.53 Aligned_cols=116 Identities=18% Similarity=0.235 Sum_probs=90.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 79 (124)
|+++||||+||||++.+++++++. .+|++++.-.-....+... .-..+++..++++|+.|.+.+.++++ ++|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~--~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~V 78 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA--DVEDSPRYRFVQGDICDRELVDRLFKEYQPDAV 78 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH--hhhcCCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence 679999999999999999999875 5577777654221122222 22235789999999999999999998 59999
Q ss_pred EEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 80 ICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 80 i~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|.|+.. .+.+.|+.|+.++++++++....-||+++|+-=+|
T Consensus 79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVY 130 (340)
T COG1088 79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVY 130 (340)
T ss_pred EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccc
Confidence 9999754 35689999999999999999822389999975444
No 92
>PRK05717 oxidoreductase; Validated
Probab=99.69 E-value=5.3e-16 Score=104.64 Aligned_cols=114 Identities=15% Similarity=0.127 Sum_probs=85.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
++|+++||||+|+||+++++.|+++|++|++++|++. ...+..+. ...++.++.+|+++++++.++++.
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~----~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE----RGSKVAKA-LGENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHH-cCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999988762 11111111 234678999999999988776543
Q ss_pred -cCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCcc
Q 033236 76 -VDVVICTISGVH----------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMIP 120 (124)
Q Consensus 76 -~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~~ 120 (124)
+|++|||+|... .++.|+.++.++++++.+. ....++|++||...
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~ 147 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRA 147 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhh
Confidence 799999998542 2346788999999998642 11357888887654
No 93
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.69 E-value=6.2e-16 Score=103.78 Aligned_cols=117 Identities=16% Similarity=0.077 Sum_probs=84.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|++++++||||+|+||+++++.|+++|++|++. .|++... +...+... ....++.++.+|++|++++.++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAA-EETAEEIE-ALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 557899999999999999999999999998764 5654111 11111111 123468899999999999988876
Q ss_pred --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~ 119 (124)
++|+|||++|... .++.|..++.++++++.+.. ..++++++||..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~ 143 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLG 143 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchh
Confidence 3799999998532 13467788888888886532 145999998754
No 94
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.6e-16 Score=105.17 Aligned_cols=111 Identities=14% Similarity=0.071 Sum_probs=84.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--------c
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--------R 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------~ 75 (124)
|+++||||+|++|+++++.|+++|++|++++|++. ...+........++.++.+|++|.+++.++++ +
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEA----GLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH----HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999872 21121122224568899999999998888765 3
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|+||||+|... .+..|+.++.++++++.+ .+ ..+++++||..
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~ 138 (260)
T PRK08267 78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSAS 138 (260)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchh
Confidence 699999998542 134677888888777753 33 46888888754
No 95
>PRK12320 hypothetical protein; Provisional
Probab=99.69 E-value=3.6e-16 Score=117.45 Aligned_cols=101 Identities=20% Similarity=0.184 Sum_probs=84.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+++||||+|+||+++++.|+++|++|++++|.+. . ....+++++.+|+.++. +.++++++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~--------~---~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA 68 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH--------D---ALDPRVDYVCASLRNPV-LQELAGEADAVIHLA 68 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh--------h---cccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence 47999999999999999999999999999998751 1 11346889999999985 788888999999999
Q ss_pred cccc--ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 84 SGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 84 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
+... ....|+.++.+++++|.+.+ + ++|++||.
T Consensus 69 a~~~~~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~ 103 (699)
T PRK12320 69 PVDTSAPGGVGITGLAHVANAAARAG-A-RLLFVSQA 103 (699)
T ss_pred ccCccchhhHHHHHHHHHHHHHHHcC-C-eEEEEECC
Confidence 8532 22468899999999999998 5 68888865
No 96
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.69 E-value=4.5e-16 Score=115.61 Aligned_cols=120 Identities=15% Similarity=0.159 Sum_probs=90.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHH--Hhh------h-----------hccCCeEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQ--MLL------S-----------FKKQGAHLI 59 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~--~~~------~-----------~~~~~~~~~ 59 (124)
.+++++||||+|++|+++++.|++.+ .+|+++.|.....+....- .+. . +...++..+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 46899999999999999999999865 3789999976432211111 100 0 012468899
Q ss_pred EcccCCh------HHHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 60 EASFADH------RSLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 60 ~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.+|++++ ++.+.+.+++|+|||+|+..++ .+.|+.++.++++.+.+.+.+++++++||..+|
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 9999987 4677777889999999987643 356899999999999887547899999987665
No 97
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.69 E-value=6.6e-16 Score=103.58 Aligned_cols=116 Identities=19% Similarity=0.192 Sum_probs=88.0
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||+|++|+++++.|+++|++|++++|+.. ...+..... ...++.++.+|++++++++++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 76 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNRE----AAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQ 76 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999998862 221111111 23568899999999999988875
Q ss_pred ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236 75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~ 121 (124)
++|++||++|... .++.|+.+..++++++. +.+ .++++++||...+
T Consensus 77 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~ 143 (250)
T TIGR03206 77 ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAAR 143 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhc
Confidence 4899999998431 13467788888777765 344 5789999976543
No 98
>PLN02253 xanthoxin dehydrogenase
Probab=99.69 E-value=9.6e-16 Score=104.65 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=85.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|++|+++||||+|+||+++++.|+++|++|++++|++. ...+....+. ..++.++++|++|++++.++++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDD----LGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999998762 2112222222 2468899999999999988876
Q ss_pred --ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|+.++.++++++.+.. ...+++++||..
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~ 157 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA 157 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh
Confidence 4899999998531 13567888888888776431 135788877644
No 99
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.69 E-value=5e-16 Score=107.55 Aligned_cols=113 Identities=28% Similarity=0.470 Sum_probs=87.2
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEEe
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVICT 82 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~ 82 (124)
+++|+||+|++|+++++.|+++|++|++++|...... ....... ...+++++.+|+++++++.++++ ++|+|||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP-EALKRGE--RITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch-hhhhhhc--cccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 5899999999999999999999999988876442111 1111111 11257889999999999999987 59999999
Q ss_pred Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|... .+..|+.++.++++++.+.+ +++++++||...|
T Consensus 78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~ 125 (328)
T TIGR01179 78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVY 125 (328)
T ss_pred ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhc
Confidence 98542 23568899999999999888 7899999976544
No 100
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.69 E-value=6e-16 Score=104.37 Aligned_cols=116 Identities=14% Similarity=0.171 Sum_probs=85.5
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++|+++||||+++||+++++.|+++|++|++++|+.. +......+. ...++.++.+|+++++++.++++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA---PETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH---HHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 34688999999999999999999999999999887641 111122211 23467899999999999998876
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.+...+.+.+.+. +...++|++||...
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 146 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS 146 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh
Confidence 3799999998532 1457788877777776542 21258999987653
No 101
>PLN00016 RNA-binding protein; Provisional
Probab=99.69 E-value=2.8e-16 Score=111.68 Aligned_cols=109 Identities=23% Similarity=0.277 Sum_probs=82.7
Q ss_pred CceEEEE----ccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHH---HHHhhhhccCCeEEEEcccCChHHHHHHh--
Q 033236 3 KSKVLVV----GGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDK---LQMLLSFKKQGAHLIEASFADHRSLVEAV-- 73 (124)
Q Consensus 3 ~~~ili~----Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-- 73 (124)
+++++|| ||+|++|+++++.|+++|++|++++|++....... ......+...+++++.+|+.| +.+++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence 4789999 99999999999999999999999999873211000 001112223468899999876 44443
Q ss_pred cccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 74 KRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 74 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.++|+|||+++ .+..++.++++++.+.| ++++|++||...|
T Consensus 129 ~~~d~Vi~~~~------~~~~~~~~ll~aa~~~g-vkr~V~~SS~~vy 169 (378)
T PLN00016 129 AGFDVVYDNNG------KDLDEVEPVADWAKSPG-LKQFLFCSSAGVY 169 (378)
T ss_pred CCccEEEeCCC------CCHHHHHHHHHHHHHcC-CCEEEEEccHhhc
Confidence 46999999986 34677899999999999 8999999987655
No 102
>PRK06196 oxidoreductase; Provisional
Probab=99.69 E-value=6.6e-16 Score=107.29 Aligned_cols=111 Identities=18% Similarity=0.186 Sum_probs=82.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||.++++.|+++|++|++++|++. ...+....+ .++.++++|++|.++++++++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~----~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPD----VAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence 4678999999999999999999999999999999862 211111111 247899999999999988774
Q ss_pred ccCEEEEeCcccc------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|+.+...+.+.+ .+.+ ..++|++||..
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~ 158 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAG 158 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHH
Confidence 4899999998531 1346777765555544 4444 46899998753
No 103
>PRK06398 aldose dehydrogenase; Validated
Probab=99.69 E-value=7.4e-16 Score=104.29 Aligned_cols=106 Identities=10% Similarity=0.158 Sum_probs=84.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++|+++||||+|+||+++++.|+++|++|++++|+... ..++.++++|++|++++.++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46889999999999999999999999999999998621 1257899999999999888775
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~ 121 (124)
++|++|||+|... .++.|..++..+++++.+ .+ ..++|++||...+
T Consensus 72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~ 135 (258)
T PRK06398 72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSF 135 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhc
Confidence 4899999998532 135678888888777754 33 4689999976543
No 104
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.69 E-value=8e-16 Score=104.25 Aligned_cols=113 Identities=18% Similarity=0.185 Sum_probs=84.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++++|++.. ..+.... ...++.++.+|+++++++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN----GAAVAAS-LGERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHH-hCCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 36789999999999999999999999999999998621 1111111 23467899999999999988876
Q ss_pred ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH-------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~ 119 (124)
.+|++|||+|... .++.|+.+..++++++.+. ..-.++|++||..
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 3799999998531 1345777777777776542 1135889888754
No 105
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.69 E-value=5.1e-16 Score=104.60 Aligned_cols=114 Identities=16% Similarity=0.187 Sum_probs=82.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~ 81 (124)
+++++||||+|++|+++++.|++.|++|++++|++... ............++.++.+|++|++++.++++ ++|+|||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV--TALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 57899999999999999999999999999999986211 11111111123458899999999999999887 7999999
Q ss_pred eCcccc--------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCc
Q 033236 82 TISGVH--------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 82 ~a~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~ 119 (124)
|+|... .++.|..+..++.+ .+.+.+ .+++|++||..
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~ 134 (257)
T PRK09291 80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMA 134 (257)
T ss_pred CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChh
Confidence 998542 12345666555544 444555 57999998754
No 106
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.69 E-value=8.8e-16 Score=103.02 Aligned_cols=117 Identities=16% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||.+++++|+++|++|++++|++. ....+.... ...++..+.+|+++++++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~---~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP---SETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH---HHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999998651 111111111 23468899999999999987765
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~ 121 (124)
++|++||++|... .++.|..+..++++++.+. +...+++++||...+
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 144 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF 144 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc
Confidence 3899999998532 1356788888888887642 212588988876543
No 107
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.69 E-value=3.4e-16 Score=106.61 Aligned_cols=119 Identities=16% Similarity=0.159 Sum_probs=85.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|++++++|||++|+||+++++.|+++|++|++++|++...... .+...... ..++.++.+|++|++++.++++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAA-AEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999986221111 11111111 2467899999999999988876
Q ss_pred --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|..+...+++++.+.. ...+++++||...
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~ 149 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA 149 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh
Confidence 5799999998431 12456777877877765532 1358999887643
No 108
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.69 E-value=1.1e-15 Score=102.86 Aligned_cols=118 Identities=19% Similarity=0.152 Sum_probs=85.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
|+|+++|||++|++|+++++.|+++|++|++++|+..+......+.... ...++.++.+|+++++++.++++
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3578999999999999999999999999999998752211111121111 23468899999999999888775
Q ss_pred ccCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh----CC-----ccEEEEecCCcc
Q 033236 75 RVDVVICTISGVH----------------FRSHNILMQLKLVDAIREA----GN-----VKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~----~~-----~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.++.++++++.+. .. ..+++++||...
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 150 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNA 150 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhh
Confidence 4799999998531 1356788888888877543 10 357899987654
No 109
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.69 E-value=1.1e-15 Score=102.14 Aligned_cols=116 Identities=17% Similarity=0.121 Sum_probs=85.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.+++++|||++|++|+++++.|+++|++|+++.|++........+... ....++..+.+|+++++++.++++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG-ALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999998888876221111111111 123568899999999999988876
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~ 119 (124)
++|+|||++|.... .+.|+.+..++.+++.+. + .++++++||..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~ 144 (248)
T PRK05557 83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVV 144 (248)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccc
Confidence 47999999985321 235677888888887653 3 46799988754
No 110
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.69 E-value=4.9e-16 Score=108.96 Aligned_cols=116 Identities=16% Similarity=0.290 Sum_probs=88.0
Q ss_pred eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCch-HHHH-Hhhhh-----c-c-CCeEEEEcccCCh------H
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDI-DKLQ-MLLSF-----K-K-QGAHLIEASFADH------R 67 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~-~~~~-~~~~~-----~-~-~~~~~~~~D~~~~------~ 67 (124)
+++||||+|++|+++++.|+++| ++|+++.|+.+.... .+.. ..+.. . . .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 789999998642110 0111 11110 0 1 4789999999754 5
Q ss_pred HHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 68 SLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 68 ~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.+..+.+++|+|||+++.... ...|+.++.++++++.+.+ +++++++||...|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~ 140 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVL 140 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEcccccc
Confidence 677778899999999986542 3578999999999999887 7889999987654
No 111
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.1e-15 Score=102.43 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=85.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
.+++++|||++|++|+++++.|+++|++|++++|++.. .......+. ..++..+.+|++|++++.++++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAE----ARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999887622 111111211 3468899999999999988875
Q ss_pred --ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~ 120 (124)
++|++||++|.... .+.|..+..++++++.+.. ...+++++||...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~ 146 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA 146 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh
Confidence 48999999985421 2467788888888876532 1348999987543
No 112
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.5e-15 Score=102.27 Aligned_cols=112 Identities=19% Similarity=0.197 Sum_probs=86.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.+++++||||+|+||.++++.|+++|++|++++|++. ............+..+.+|+++++++.++++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-----VAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3678999999999999999999999999999999862 1222222233456789999999999888875
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~ 119 (124)
++|++||++|... ..+.|+.+..++++++.+. + ..+++++||..
T Consensus 89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 150 (255)
T PRK06841 89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQA 150 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchh
Confidence 4799999998542 1346778888888887653 4 46899998754
No 113
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.1e-15 Score=103.38 Aligned_cols=116 Identities=18% Similarity=0.191 Sum_probs=83.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~ 75 (124)
.++++||||+|++|++++++|+++| ++|++++|+++.......+........+++++.+|++|++++.++++ +
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~ 87 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD 87 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence 4789999999999999999999985 99999999874311112222222223368899999999988766654 5
Q ss_pred cCEEEEeCccccc--------------eecchHHHHH----HHHHHHHhCCccEEEEecCCc
Q 033236 76 VDVVICTISGVHF--------------RSHNILMQLK----LVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~~--------------~~~~~~~~~~----~~~~~~~~~~~~~~i~~ss~~ 119 (124)
+|++||++|.... ++.|+.+... +.+.+.+.+ ..+++++||..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~ 148 (253)
T PRK07904 88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVA 148 (253)
T ss_pred CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechh
Confidence 9999999975421 2445555544 566666666 57999998764
No 114
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.68 E-value=7.5e-16 Score=104.38 Aligned_cols=117 Identities=14% Similarity=0.148 Sum_probs=81.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++||||+|+||+++++.|+++|++|++++|++...+....+..+.....++..+.+|++|++++.++++ +
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGG 87 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999999999999873222111111111112357789999999999888765 3
Q ss_pred cCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~ 120 (124)
+|++|||||.... ++.|..+...+.+.+ .+.+ ..+++++||...
T Consensus 88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 149 (265)
T PRK07062 88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLA 149 (265)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccc
Confidence 7999999985321 234555555555444 3344 468999987654
No 115
>PRK07985 oxidoreductase; Provisional
Probab=99.68 E-value=1.2e-15 Score=105.22 Aligned_cols=120 Identities=16% Similarity=0.142 Sum_probs=86.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++..|+..................++.++.+|+++++++.++++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999998877542211111111111123457789999999998887765
Q ss_pred ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236 75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~ 121 (124)
++|++||++|... .++.|+.++..+++++.+.- .-.++|++||...+
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~ 190 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY 190 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc
Confidence 3799999998421 24578889989998887641 12589998876543
No 116
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.68 E-value=9e-16 Score=103.95 Aligned_cols=114 Identities=24% Similarity=0.169 Sum_probs=84.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++++|+. ...+.........+..+++|+++++++.++++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA-----AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999976 22222222123457889999999998888775
Q ss_pred ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCcc
Q 033236 75 RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.++..+++++.+.- .-.++|+++|...
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~ 145 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAG 145 (262)
T ss_pred CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccce
Confidence 3799999998421 23567788888888886632 1246777776543
No 117
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.68 E-value=7.2e-16 Score=103.89 Aligned_cols=115 Identities=14% Similarity=0.107 Sum_probs=82.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++||||+|+||.++++.|+++|++|++++|++...+.. .+.... ...++.++.+|+++++++.++++ +
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQL-VAEIRA-EGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999986321111 111111 13457889999999999888876 4
Q ss_pred cCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
+|++||++|... .++.|+.+...+++++. +.+ ..+++++||...
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~ 146 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVG 146 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHh
Confidence 899999998531 13456666666655543 344 468999887543
No 118
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.68 E-value=1.4e-15 Score=102.97 Aligned_cols=115 Identities=22% Similarity=0.172 Sum_probs=85.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++++|++ ...+........++.++++|+++++++.++++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSA-----EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFG 79 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999986 22222222123467889999999998888775
Q ss_pred ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236 75 RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~ 121 (124)
++|++|||+|... .++.|+.+...+++++.+.- .-.++|++||...+
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 147 (263)
T PRK06200 80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF 147 (263)
T ss_pred CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence 4899999998532 13457777777777776431 12478888876544
No 119
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1e-15 Score=103.14 Aligned_cols=109 Identities=24% Similarity=0.221 Sum_probs=85.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
++++++||||+|+||+++++.|+++|++|++++|++.. .....++.++++|+++++++.++++.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----------TVDGRPAEFHAADVRDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46889999999999999999999999999999998621 11235678999999999999888764
Q ss_pred -cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 76 -VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
+|++|||+|... .++.|+.++..+++++.+. +...++|++||...
T Consensus 75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 138 (252)
T PRK07856 75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG 138 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 699999998532 1346788888888887642 11358999987653
No 120
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=6.4e-16 Score=107.67 Aligned_cols=117 Identities=18% Similarity=0.274 Sum_probs=92.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCc-hHHHHHh-------hhhccCCeEEEEcccCCh------HH
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLD-IDKLQML-------LSFKKQGAHLIEASFADH------RS 68 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~-~~~~~~~-------~~~~~~~~~~~~~D~~~~------~~ 68 (124)
+++++|||+||+|.+++.+|+.+- .+|+|++|.++... .++.++. .+....+++.+.+|++++ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999998875 69999999875311 1111111 112356899999999854 68
Q ss_pred HHHHhcccCEEEEeCcccc-------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 69 LVEAVKRVDVVICTISGVH-------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 69 ~~~~~~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
..++.+.+|.|||+++.++ ...+|+.|+.++++.|...+ .|.++|+||..++
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~ 139 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVG 139 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeec
Confidence 8889999999999998665 35789999999999998776 7899999977653
No 121
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.68 E-value=2.2e-15 Score=101.59 Aligned_cols=113 Identities=19% Similarity=0.204 Sum_probs=85.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
|+++++||||+|+||+++++.|+++|++|++++|+++ ......+.....+++.+.+|+.|++++.+++++
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAA----ALAAFADALGDARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999862 211222222345688999999999999888764
Q ss_pred -cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++||++|.... ...|..+..++++++.+ .+ ..+++++||..
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~ 138 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVN 138 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchh
Confidence 7999999985421 23567777777777743 34 46899998753
No 122
>PRK09242 tropinone reductase; Provisional
Probab=99.68 E-value=9.4e-16 Score=103.49 Aligned_cols=119 Identities=13% Similarity=0.187 Sum_probs=86.2
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|.+|+++|+|++|+||+++++.|+++|++|++++|++...+....+......+.++..+.+|+++++++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35688999999999999999999999999999999862211111111111123467889999999998877765
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|++||++|... .+..|+.+..++++++.+ .+ ..+++++||...
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~ 150 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSG 150 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECcccc
Confidence 3799999998531 134677888888777753 44 468999987654
No 123
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=1.9e-15 Score=100.92 Aligned_cols=114 Identities=16% Similarity=0.145 Sum_probs=84.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++|||++|++|.+++++|+++|++|++++|++...+. ..+.... ...++.++.+|+++++++.++++ +
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKA-VAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998622111 1111111 23468889999999999988876 5
Q ss_pred cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++||++|.... ++.|+.++.++.+++.+ .+ .++++++||..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~ 145 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTA 145 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchh
Confidence 8999999985421 34567777777777754 34 46888888754
No 124
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.67 E-value=1.3e-15 Score=102.76 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=85.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++|||++|++|.++++.|+++|++|++++|+.. . .+........++..+.+|++|++++.++++ +
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~----~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPA----R-ARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHH----H-HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999872 2 222111123457889999999999988876 4
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~ 119 (124)
+|++||++|... .++.|+.+..++++++.+.. ...++|++||..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 142 (257)
T PRK07067 81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA 142 (257)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH
Confidence 799999998532 13567888888988886532 114788888743
No 125
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.4e-15 Score=102.61 Aligned_cols=118 Identities=15% Similarity=0.089 Sum_probs=85.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
|++++++|||++|+||+++++.|+++|++|++++|+++.......+.+.. ...++..+.+|++|++++.++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34678999999999999999999999999999998763211111122211 134578899999999998887764
Q ss_pred --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
+|++|||+|... .++.|+.+...+++++.+ .+ ..+++++||...
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~ 148 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSG 148 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhh
Confidence 699999998542 134677777776666543 33 468898887543
No 126
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.67 E-value=2.2e-15 Score=101.40 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=84.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
++++++|||++|++|+++++.|+++|++|.+. .|+. .........+. ...+.++.+|++|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK----QAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999775 5654 11112222222 2457899999999999988876
Q ss_pred ---------ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEecCCcc
Q 033236 75 ---------RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMIP 120 (124)
Q Consensus 75 ---------~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~ 120 (124)
++|++||++|.... .+.|+.++.++++.+.+.- ...+++++||...
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~ 150 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV 150 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh
Confidence 48999999985421 2367888888888887631 1358998887543
No 127
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=1.8e-15 Score=102.03 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=81.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++|+++||||+|+||+++++.|+++|++|+++.++. +...+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA----ENEAKEL---REKGVFTIKCDVGNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc----HHHHHHH---HhCCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 358899999999999999999999999998887665 1222222 22357899999999999988876
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHH----HHHhCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDA----IREAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|+.++..+.+. +.+.+ ..++|++||..
T Consensus 79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~ 140 (255)
T PRK06463 79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNA 140 (255)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHH
Confidence 4799999998532 134577776555444 44344 46899998754
No 128
>PRK08264 short chain dehydrogenase; Validated
Probab=99.67 E-value=1.3e-15 Score=101.57 Aligned_cols=109 Identities=19% Similarity=0.205 Sum_probs=85.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~ 78 (124)
+++++||||+|++|+++++.|+++|+ +|++++|++.. ... ...++.++.+|++|++++.++++. +|+
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~--------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES--------VTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh--------hhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 46899999999999999999999998 99999998721 111 245688999999999999998874 899
Q ss_pred EEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCccc
Q 033236 79 VICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIPF 121 (124)
Q Consensus 79 vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~~ 121 (124)
|||++|... ..+.|..+..++++++.+ .+ ..+++++||...+
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~ 137 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSW 137 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhc
Confidence 999998621 134567888888888654 34 5689998876543
No 129
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.67 E-value=2.5e-15 Score=103.39 Aligned_cols=119 Identities=15% Similarity=0.119 Sum_probs=88.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++|+++||||+|+||.++++.|+++|++|++++|++........+... ....++.++.+|+++.+++.++++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE-KEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999876322112222221 123467889999999999888875
Q ss_pred ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHh-CCccEEEEecCCccc
Q 033236 75 RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~~~ 121 (124)
++|++||++|... .++.|+.+..++++++.+. ....++|++||...+
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~ 186 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGY 186 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccccc
Confidence 3799999998531 1356788899999988764 112589999876544
No 130
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.67 E-value=2.6e-15 Score=101.39 Aligned_cols=116 Identities=17% Similarity=0.203 Sum_probs=81.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||+++++.|+++|++|++++|++. . ....+.... ....+.++.+|+++++++.++++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-V-HEVAAELRA-AGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-H-HHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 34678999999999999999999999999999998751 1 111111111 13457789999999988888775
Q ss_pred -ccCEEEEeCcccc---------------ceecchHHHHHHH----HHHHHhCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH---------------FRSHNILMQLKLV----DAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~---------------~~~~~~~~~~~~~----~~~~~~~~~~~~i~~ss~~~ 120 (124)
++|++|||||... .++.|+.+...++ +.+.+.+ ..+++++||...
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~ 147 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIAT 147 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccc
Confidence 4799999997421 1234555555444 4444455 568999997653
No 131
>PRK08643 acetoin reductase; Validated
Probab=99.67 E-value=2.9e-15 Score=100.99 Aligned_cols=115 Identities=18% Similarity=0.132 Sum_probs=83.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|+++++||||+|+||.++++.|+++|++|++++|++.. ..+....+. ..++.++++|+++++++.++++
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEET----AQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT 76 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999998622 111111221 3467889999999998888776
Q ss_pred --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|..++..+++.+.+. +...+++++||...
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 142 (256)
T PRK08643 77 FGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG 142 (256)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc
Confidence 4799999998532 1245677766666666542 21257888887643
No 132
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.67 E-value=2.2e-15 Score=100.69 Aligned_cols=112 Identities=18% Similarity=0.208 Sum_probs=83.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|++|+++++.|+++|+.|++..|++ ...+........+++++.+|+++.++++++++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV-----EKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999988888775 11221111123467899999999999888764
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|+.+..++++++.+ .+ ..++|++||..
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 141 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVV 141 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHH
Confidence 4899999998532 135677787777777653 34 56899998754
No 133
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.67 E-value=4.4e-15 Score=100.84 Aligned_cols=117 Identities=15% Similarity=0.161 Sum_probs=83.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~ 75 (124)
++++++|||++|+||+++++.|+++|++|++++|++...+. ..+......+.++.++.+|++|++++.++++ +
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKK-AREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 46789999999999999999999999999999998622111 1111111123468899999999999988876 3
Q ss_pred cCEEEEeCccccc--------------eecchHHHHHHHHH----HHHhCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVHF--------------RSHNILMQLKLVDA----IREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~~ 120 (124)
+|++|||+|.... ++.|..+...++++ +.+.+ ..++|++||...
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~ 147 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAI 147 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccc
Confidence 8999999985321 23455554444444 44444 468999997653
No 134
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.3e-15 Score=103.79 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=82.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV 76 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 76 (124)
|+++||||+|++|+++++.|+++|++|++++|++ ...+ .....++.++.+|+++++++.++++ ++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKA-----EDVE---ALAAAGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHH---HHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999986 1122 1223457789999999999888764 47
Q ss_pred CEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCCcc
Q 033236 77 DVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGMIP 120 (124)
Q Consensus 77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~~~ 120 (124)
|++||++|... .++.|..+..++++++.+. + ..+++++||...
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~ 133 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSG 133 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccc
Confidence 99999998532 1346777887888877542 3 357888887553
No 135
>PRK09135 pteridine reductase; Provisional
Probab=99.66 E-value=2.5e-15 Score=100.61 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=82.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
+++++||||+|++|+++++.|+++|++|++++|+.....+...+.........+.++.+|++|++++.++++.
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999987522111111112121234578999999999999988763
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecC
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEG 117 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss 117 (124)
+|+|||++|... ..+.|+.++.++++++.+.- ...+++.+++
T Consensus 86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK09135 86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD 143 (249)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC
Confidence 799999998421 23468899999999986521 1235555554
No 136
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.2e-15 Score=102.28 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=85.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----cCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----VDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~ 78 (124)
+|+++||||+|++|.++++.|+++|++|++++|+++..+. ..+........+++++++|+++++++.++++. +|.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLER-LADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHH-HHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence 3689999999999999999999999999999998732211 11111111234788999999999999888764 699
Q ss_pred EEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 79 VICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+||++|... .++.|+.+..++++++.+ .+ ..+++++||..
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 137 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVA 137 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEeccc
Confidence 999998532 134677888888777654 34 57899888754
No 137
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.9e-15 Score=100.43 Aligned_cols=111 Identities=20% Similarity=0.174 Sum_probs=82.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|++|++++++|+++|++|++++|++ +...+..+. ...++.++++|+++.+++..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDP----ASLEAARAE-LGESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH----HHHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999875 111111111 13457789999999988776654
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh--CCccEEEEecCC
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGM 118 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~ 118 (124)
++|++||++|... .++.|+.++.++++++.+. . ..++++++|.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~i~~~S~ 138 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASIVLNGSI 138 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEech
Confidence 4799999998532 2356788899999999753 2 2466666653
No 138
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.8e-15 Score=102.26 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=85.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
++++++||||+|++|+++++.|+++|++|++++|+.. ...+..+.. ...++.++.+|+++++++.++++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVE----KCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999998762 111111111 12457888999999999988876
Q ss_pred --ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|++||++|.... ++.|..++.++.+.+.+ .+ ..+++++||...
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~ 149 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVA 149 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHh
Confidence 47999999985421 24677888888877653 33 467999998654
No 139
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.66 E-value=3.6e-15 Score=100.23 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=82.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
+++++|||++|++|+++++.|+++|++|++++|++. ........+ ...++.++.+|++|++++.++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEA----GAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF 76 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999999999999862 111111111 23468899999999997766554
Q ss_pred -ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|+|||+++.... .+.|..+...+++.+ .+.+ +++++++||..
T Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~ 139 (255)
T TIGR01963 77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAH 139 (255)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchh
Confidence 47999999985421 235677766777666 4455 67999998754
No 140
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.4e-15 Score=100.55 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=83.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
+++++|+|++|++|+.+++.|+++|++|++++|++. ...+..... ...++.++.+|+++++++.++++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQD----ALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467999999999999999999999999999999862 211111111 23468899999999999888876
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|..++.++.+.+. +.+ ..+++++||...
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~ 145 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAA 145 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHh
Confidence 3899999998532 13456677666666653 344 468999987654
No 141
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.66 E-value=4.4e-15 Score=104.10 Aligned_cols=114 Identities=17% Similarity=0.209 Sum_probs=82.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
+++++||||+|+||+++++.|+++|++|++++|++... .+..+.+ ...++.++.+|++|++++.++++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l----~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL----EALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 56899999999999999999999999999999986221 1111111 23467889999999999988865
Q ss_pred -ccCEEEEeCccccc--------------eecchHHHHH----HHHHHHHhCCccEEEEecCCccc
Q 033236 75 -RVDVVICTISGVHF--------------RSHNILMQLK----LVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -~~d~vi~~a~~~~~--------------~~~~~~~~~~----~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
++|++|||+|.... ++.|+.+..+ +++.+.+.+ ..++|++||...+
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~ 148 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAY 148 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhc
Confidence 48999999985321 2345444444 555555554 4789999986543
No 142
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.66 E-value=2.4e-15 Score=100.88 Aligned_cols=115 Identities=14% Similarity=0.145 Sum_probs=84.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc---
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR--- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~--- 75 (124)
|++++++||||+|++|++++++|+++|++|+++.++..+ ......... ...++.++.+|+++++++.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE---AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 346889999999999999999999999999876554311 111111122 134588999999999999988875
Q ss_pred ----cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 ----VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|+|||++|.... ++.|+.++.++++++.+ .+ ..+++++||..
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 145 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSII 145 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchh
Confidence 7999999986421 34677888888888864 33 46899998754
No 143
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.66 E-value=2.5e-15 Score=101.70 Aligned_cols=119 Identities=15% Similarity=0.062 Sum_probs=79.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
|++|+++||||+++||+++++.|+++|++|+++.|+..+......+........++.++++|++|+++++++++.
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 457899999999999999999999999999888765421111111111111234678999999999999888763
Q ss_pred --cCEEEEeCcccc---------c-----------eecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236 76 --VDVVICTISGVH---------F-----------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 --~d~vi~~a~~~~---------~-----------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~ 120 (124)
+|++|||||... + ++.|..+...+.+.+ .+.+ ..++|++||...
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 155 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGN 155 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccc
Confidence 799999997421 1 123444444333333 3333 368999987653
No 144
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.66 E-value=3.6e-15 Score=100.51 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=84.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
.+++++||||+|+||+++++.|+++|++|++.+|++. ...+....+. ..++..+.+|++|++++.++++.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAE----RAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHH----HHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999862 2112222222 34577889999999999888753
Q ss_pred ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++||++|... .++.|..+...+.+++.+ .+ ..+++++||..
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~ 147 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQ 147 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccch
Confidence 799999998532 235667777777777654 33 46899998754
No 145
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.65 E-value=4.3e-15 Score=100.39 Aligned_cols=115 Identities=14% Similarity=0.225 Sum_probs=84.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||.++++.|+++|++|+++.|+. .. +...+.... ...++.++++|+++++++.++++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NW-DETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HH-HHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468899999999999999999999999999998873 11 111122211 23468899999999999988876
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|+.+...+.+++. +.+ ..+++++||...
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 153 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLS 153 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHh
Confidence 4799999998532 12456677666665554 344 468999987653
No 146
>PRK08589 short chain dehydrogenase; Validated
Probab=99.65 E-value=1.9e-15 Score=103.01 Aligned_cols=117 Identities=9% Similarity=0.078 Sum_probs=83.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
++|+++||||+|+||+++++.|+++|++|++++|++ ..+ ...+.... ...++..+.+|+++++++.++++.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~-~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE-AVS-ETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH-HHH-HHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999973 211 11122211 234588999999999988887763
Q ss_pred -cCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236 76 -VDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF 121 (124)
Q Consensus 76 -~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~ 121 (124)
+|++|||+|.... ++.|..+...+++++.+.- .-.++|++||...+
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 145 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ 145 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc
Confidence 7999999985421 1345666666666655431 02589999876543
No 147
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=4.7e-15 Score=99.62 Aligned_cols=112 Identities=17% Similarity=0.147 Sum_probs=82.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
+++++||||+|+||+++++.|+++|++|++..++.. ...+........++.++.+|+++++++.+++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE----DAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH----HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999988765441 222222111224688999999999999888763
Q ss_pred -cCEEEEeCcccc--------------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVH--------------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~--------------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++||++|... .++.|+.+..++++++.+ .+ ..+++++||..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~ 148 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNL 148 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcc
Confidence 899999997420 145678888888888864 33 46899988653
No 148
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=2.4e-15 Score=100.53 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=84.5
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc---
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK--- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--- 74 (124)
+++++++|+||+|++|.++++.|+++|++|+++ .|++.. .......+ ...++.++.+|+++++++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEA----AQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHH----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999988 887521 11111111 23458899999999999988876
Q ss_pred ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
++|+|||++|... .++.|..+..++++.+.+ .+ .++++++||..
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~ 144 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIW 144 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHh
Confidence 6899999998642 124567777777777754 33 46799888754
No 149
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.65 E-value=4.4e-15 Score=100.22 Aligned_cols=115 Identities=16% Similarity=0.144 Sum_probs=85.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|++|+++++.|+++|++|++++|+++.. ...+.... ...++.++.+|+++++++.++++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999999999887322 11111111 23468899999999999988876
Q ss_pred -ccCEEEEeCcccc-------------ceecchHHHHHHHHHHHH---hCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVH-------------FRSHNILMQLKLVDAIRE---AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~-------------~~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~ 119 (124)
++|++||++|... ..+.|+.+..++.+.+.+ .+ ..+++++||..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~ 142 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKT 142 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHH
Confidence 4799999998431 134567777777777654 22 35899998754
No 150
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.65 E-value=1e-15 Score=104.71 Aligned_cols=92 Identities=21% Similarity=0.306 Sum_probs=78.5
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc--CEEEEe
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV--DVVICT 82 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~ 82 (124)
+++|+||+|++|++++++|+++|++|++++|+ .+|+.+++++.+++++. |+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 58999999999999999999999999998874 47999999999999865 999999
Q ss_pred Ccccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
++... .++.|+.++.++++++.+.+ . ++|++||...|
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy 104 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVF 104 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeee
Confidence 98542 23467889999999998887 4 89999986544
No 151
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.65 E-value=4.7e-15 Score=99.98 Aligned_cols=113 Identities=15% Similarity=0.210 Sum_probs=84.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
++++++||||+|+||+++++.|+++|++|++++|++. ........+ ...++.++.+|+++++++.+++++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAA----TLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHH----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999862 211111111 234588999999999999888763
Q ss_pred ---cCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 ---VDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ---~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++||++|... .++.|..+..++++.+.+ .+ ..+++++||..
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~ 149 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIA 149 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeech
Confidence 699999998532 134567777777766644 45 57899988754
No 152
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.9e-15 Score=100.94 Aligned_cols=114 Identities=14% Similarity=0.193 Sum_probs=84.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
++++++|||++|+||.++++.|+++|++|++++|+... ..+..+.+ ...++..+.+|++|++++.++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA----LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999998622 11111221 13457889999999999888775
Q ss_pred --ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236 75 --RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~ 119 (124)
++|++|||+|.... ++.|+.+...+.+++.+. +...+++++||..
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~ 148 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMS 148 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHH
Confidence 58999999985421 246778888888777543 2124688887643
No 153
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.65 E-value=3.7e-15 Score=100.64 Aligned_cols=117 Identities=13% Similarity=0.048 Sum_probs=83.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|+++++||||+|+||.++++.|+++|++|++++|+....+... +..... ...++.++.+|+++++++.++++
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVA-QEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999999999999863221111 111111 12458899999999998888765
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
++|++||++|... .++.|+.++.++++++.+ .+.-.+++++||..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~ 143 (259)
T PRK12384 80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS 143 (259)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc
Confidence 3799999998432 135677887777776654 33124888887643
No 154
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.4e-15 Score=100.83 Aligned_cols=107 Identities=20% Similarity=0.250 Sum_probs=81.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++++|+++. ....++.++.+|++|++++.++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----------DLPEGVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh-----------hcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46889999999999999999999999999999998621 013457899999999998887654
Q ss_pred ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|..+..++.+.+. +.+ ..++|++||...
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~ 141 (260)
T PRK06523 77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQR 141 (260)
T ss_pred CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccc
Confidence 4799999998421 13457777766655554 344 468999887654
No 155
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.65 E-value=4.6e-15 Score=101.22 Aligned_cols=115 Identities=21% Similarity=0.228 Sum_probs=82.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
.+++++||||+|++|+++++.|+++|++|++++|+.. ...+..+.+. ..++.++++|+++++++.++++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQE----KAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999862 2222222222 2457889999999998888765
Q ss_pred --ccCEEEEeCcccc-----------------------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH-----------------------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~-----------------------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|+.+...+++.+ .+.+ ..++|++||..
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~ 163 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMN 163 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccch
Confidence 4899999998421 1234666666555444 3344 46899998765
Q ss_pred cc
Q 033236 120 PF 121 (124)
Q Consensus 120 ~~ 121 (124)
.+
T Consensus 164 ~~ 165 (278)
T PRK08277 164 AF 165 (278)
T ss_pred hc
Confidence 44
No 156
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.65 E-value=5e-15 Score=99.00 Aligned_cols=114 Identities=17% Similarity=0.158 Sum_probs=83.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
+++++|||++|++|+++++.|+++|++|++++|++. +...+..... ...++.++.+|+++++++.++++.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN---DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999862 1111111111 234588999999999998887753
Q ss_pred --cCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcc
Q 033236 76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~ 120 (124)
+|++||++|... .++.|+.+..++.+++ .+.+ ..++|++||...
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~ 142 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNG 142 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhh
Confidence 899999998542 1246677777765444 4455 579999987654
No 157
>PRK12743 oxidoreductase; Provisional
Probab=99.64 E-value=3.9e-15 Score=100.54 Aligned_cols=117 Identities=11% Similarity=0.039 Sum_probs=84.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
|+++++||||+|+||.++++.|+++|++|+++.+++........+.... ...++.++.+|+++++++.++++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999988876542111111111111 23468899999999999888776
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~ 119 (124)
++|++||++|... .+..|+.+...+++++.+.. .-.++|++||..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 142 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH 142 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc
Confidence 3799999998542 13467788888888776532 124899988754
No 158
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3.4e-15 Score=101.50 Aligned_cols=112 Identities=14% Similarity=0.138 Sum_probs=82.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
|+++||||+|+||+++++.|+++|++|++++|+... ..+....+ ...++.++.+|+++++++.++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG----GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999988622 11111111 23467889999999998888775
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHH----HHHhCCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDA----IREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~~ 120 (124)
++|++||++|.... ++.|+.+..++.+. +.+.+ ..+++++||...
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~ 139 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAG 139 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhh
Confidence 58999999986421 23566666665555 44555 579999987654
No 159
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.64 E-value=7.5e-15 Score=98.39 Aligned_cols=115 Identities=18% Similarity=0.178 Sum_probs=81.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|+++.++|||++|++|+++++.|+++|++|++..+... ....+..+... ...+..+.+|++|.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA 77 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999888654331 11222222222 3356788999999998888765
Q ss_pred ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... ..+.|..+...+.+.+ .+.+ ..+++++||..
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~ 142 (246)
T PRK12938 78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVN 142 (246)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechh
Confidence 4899999998542 1245666766655554 3444 56899998754
No 160
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3.6e-15 Score=102.83 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=85.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
.+++++||||+|+||.++++.|+++|++|++++|++ ....+....+. ...+..+.+|++|++++.++++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE----AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999986 22122222222 2345667799999999888765
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCccc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~~~ 121 (124)
++|++|||+|... .++.|+.++.++++++.+.- ...+++++||...+
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~ 147 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAF 147 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhc
Confidence 4899999998642 13467888888888876531 13589998876543
No 161
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5.9e-15 Score=98.72 Aligned_cols=117 Identities=14% Similarity=0.110 Sum_probs=85.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++|||++|++|+++++.|+++|++++++.|+..+......+.... ...++.++.+|+++++++.++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999988877652211111122211 23568899999999999988887
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++||++|.... ++.|+.+..++++++.+.. ...+++++||..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 48999999985421 3467788888888887642 124888888654
No 162
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.64 E-value=6.7e-15 Score=99.58 Aligned_cols=114 Identities=16% Similarity=0.171 Sum_probs=84.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++||||+|+||+++++.|+++|++|++++|++. . ....+.... ...++.++.+|+++++++.++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPE-I-EKLADELCG-RGHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-H-HHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4688999999999999999999999999999998751 1 111111111 23457789999999999988876
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
++|++||++|... .++.|+.+..++++++.+ .+ ..+++++||..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~ 143 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVT 143 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHH
Confidence 4799999998532 134677888888887654 33 46888888644
No 163
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.64 E-value=7.1e-15 Score=99.72 Aligned_cols=114 Identities=16% Similarity=0.117 Sum_probs=84.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc---
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR--- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~--- 75 (124)
|++++++|||++|++|.+++++|+++|++|+++.|+++.. .+....+. ..++.++++|+++++++.++++.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV----DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999998876221 11122221 33588999999999999988763
Q ss_pred ----cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 ----VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ----~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++|||+|.... ++.|..+...+.+.+.+ .+ ..+++++||..
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~ 148 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMM 148 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCcc
Confidence 8999999986421 23566777666666543 44 56899988754
No 164
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.64 E-value=6.5e-15 Score=97.96 Aligned_cols=105 Identities=18% Similarity=0.159 Sum_probs=81.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++|+++|+||+|++|+++++.|+++|++|++++|++.. ....+++.+|+++++++.++++
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-------------DFPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-------------ccCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 677899999999999999999999999999999998721 0112578999999999888876
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
++|++||++|.... ++.|+.+..++.+++. +.+ ..+++++||..
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 129 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA 129 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc
Confidence 47999999985421 2355666666655553 455 57899998764
No 165
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.64 E-value=5.9e-15 Score=100.05 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=84.2
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++|||++|+||.++++.|+++|++|++++|++... ...++..+.+|++|++++.++++
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----------QHENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3468899999999999999999999999999999887221 12467889999999999988776
Q ss_pred -ccCEEEEeCcccc-----------------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH-----------------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~-----------------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|+.++..+++++.+.- ...++|++||...
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~ 148 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG 148 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc
Confidence 3799999998431 13467777888887776531 1357999887654
No 166
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.64 E-value=1.1e-14 Score=98.21 Aligned_cols=115 Identities=11% Similarity=0.122 Sum_probs=85.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++|||++|+||.+++++|+++|++|++++++.. ....+.... ....+..+++|++|++++.++++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP---TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFG 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch---HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4688999999999999999999999999988876541 122222222 13457889999999999998876
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
++|++|||||... .++.|..+..++++++.+. +.-.+++++||...
T Consensus 85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 148 (253)
T PRK08993 85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS 148 (253)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh
Confidence 3899999998532 1357888888888877543 21247888887643
No 167
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5.9e-15 Score=99.34 Aligned_cols=120 Identities=14% Similarity=0.056 Sum_probs=83.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++|+++||||+|+||.++++.|++.|++|++..++.............. .......+.+|+++.+++..+++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 34689999999999999999999999999988754331111111111111 23456788999999877665442
Q ss_pred -------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236 75 -------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF 121 (124)
Q Consensus 75 -------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~ 121 (124)
++|++|||||... .++.|+.++..+++++.+.- ...++|++||...+
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~ 149 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR 149 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence 5899999998431 12467888888888887642 12589999977643
No 168
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.64 E-value=6.3e-15 Score=99.83 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=85.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
++++++||||+|++|.++++.|+++|++|++++|++.. ..+....+ ...++.++.+|++|++++.++++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999998621 11111111 23468899999999999888765
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
.+|++||++|.... ++.|+.++.++++.+.+ .+ ..+++++||...
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~ 142 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFG 142 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhh
Confidence 37999999986421 34678888888888754 22 357888876543
No 169
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.64 E-value=6.1e-15 Score=99.27 Aligned_cols=115 Identities=15% Similarity=0.102 Sum_probs=82.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
+++++|+||+|++|.++++.|+++|++|++++|++...... .+.... ...++..+.+|+++++++.+++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEET-VALIRE-AGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999999999999987321111 111111 234688999999999999888764
Q ss_pred cCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
+|++||++|... .++.|+.+...+++++. +.+ ..+++++||...
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~ 147 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAG 147 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhh
Confidence 699999998531 12356666666555443 344 468888887653
No 170
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.64 E-value=7e-15 Score=98.48 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=80.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--------- 74 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------- 74 (124)
|+++||||+|+||++++++|+++|++|++++|+... .. ......++.++.+|+++++++.++++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP----SL---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD 74 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch----hh---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence 589999999999999999999999999999998621 11 11123468899999999998888542
Q ss_pred --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.+...+.+.+.+ .+ ..+++++||...
T Consensus 75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~ 140 (243)
T PRK07023 75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAA 140 (243)
T ss_pred CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhh
Confidence 3789999998532 245677776666555543 33 468999987653
No 171
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.63 E-value=3.1e-15 Score=100.08 Aligned_cols=112 Identities=17% Similarity=0.153 Sum_probs=84.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 78 (124)
++++++|+|++|++|+++++.|+++|++|++++|++ ...+.... ..+..++.+|+++++++.++++ ++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~-----~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~d~ 80 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA-----AALDRLAG--ETGCEPLRLDVGDDAAIRAALAAAGAFDG 80 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH--HhCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence 457899999999999999999999999999999986 22221111 1245688999999999999886 3899
Q ss_pred EEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 79 VICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 79 vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
+||++|.... ...|+.+..++++++.+. +...+++++||...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~ 140 (245)
T PRK07060 81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAA 140 (245)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHH
Confidence 9999985421 236778888888888653 11258999987653
No 172
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.6e-15 Score=102.78 Aligned_cols=113 Identities=13% Similarity=0.105 Sum_probs=83.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
+++++||||+|+||+++++.|+++|++|++++|++... .+..+.. ....+.++.+|++|++++.++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l----~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEAL----QAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999986221 1111111 13457788999999999998874
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++|++|||+|... .++.|+.++.++.+++. +.+ ..++|++||...
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~ 146 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGG 146 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhh
Confidence 4899999998432 13567777777766664 334 468888887653
No 173
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.63 E-value=5.9e-16 Score=107.03 Aligned_cols=102 Identities=18% Similarity=0.275 Sum_probs=72.1
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HH-HHHHhc-----cc
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RS-LVEAVK-----RV 76 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~~-----~~ 76 (124)
++||||+|++|+++++.|+++|++++++.|+..... . . ..+..+|+.|. ++ +.++++ ++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~----~-~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT----K-F-------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch----H-H-------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 799999999999999999999997777666542210 0 0 01223444443 33 333432 68
Q ss_pred CEEEEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 77 DVVICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 77 d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+|||+|+... ..+.|+.++.+++++|.+.+ + ++|++||...|
T Consensus 70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vy 120 (308)
T PRK11150 70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATY 120 (308)
T ss_pred cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHh
Confidence 99999997321 24568899999999999988 5 69999987655
No 174
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.63 E-value=4.5e-15 Score=102.92 Aligned_cols=117 Identities=16% Similarity=0.149 Sum_probs=89.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
.+++++|||++++||..+++.|+.+|.+|+...|+....++...+.........+.++++|+++.+++.++.+.
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 45789999999999999999999999999999999743333333333333456788999999999999988653
Q ss_pred -cCEEEEeCcccc------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVH------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
.|++|||||... .+++|+.|...+.+.+. ++. ..|+|++||..
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~ 173 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSIL 173 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCcc
Confidence 799999999542 24578877766666554 343 36999999854
No 175
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=8e-15 Score=98.45 Aligned_cols=118 Identities=13% Similarity=0.027 Sum_probs=83.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++||||+|++|++++++|+++|+++++..|+.............. ...++..+.+|+++++++.++++ +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999988776542111111111111 12356788999999998888776 4
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF 121 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~ 121 (124)
+|+|||++|... ..+.|+.+..++++++.+.- ...+++++||...+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 145 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI 145 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc
Confidence 799999998421 13456777888888887642 12479999886654
No 176
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.63 E-value=8.5e-15 Score=98.77 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=80.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||.+++++|+++|++|++++|++. ......+.. ...++.+|+++++++.++++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~----~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPE----AGKAAADEV---GGLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHc---CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999861 111111111 22578999999999988876
Q ss_pred -ccCEEEEeCccccc----------------eecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVHF----------------RSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~~----------------~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
++|++||++|.... ++.|..++..+++.+. +.+ ..+++++||..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~ 142 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFV 142 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchh
Confidence 47999999985321 2345666666666554 344 45788887643
No 177
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.63 E-value=6.1e-15 Score=98.93 Aligned_cols=116 Identities=14% Similarity=0.119 Sum_probs=79.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+|+++||||+|++|..+++.|+++|++|++..+++.+........... ...++.++.+|+++++++.++++ +
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999999987654431111111111111 23468899999999998887765 4
Q ss_pred cCEEEEeCccccc---------------eecchHHHHHHHHHHHHhCCc------cEEEEecCCc
Q 033236 76 VDVVICTISGVHF---------------RSHNILMQLKLVDAIREAGNV------KKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~~~------~~~i~~ss~~ 119 (124)
+|++||++|.... .+.|..+...+++.+.+.... .++|++||..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~ 145 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIA 145 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence 8999999985321 346677777777655442101 3588888653
No 178
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.63 E-value=4.8e-15 Score=100.64 Aligned_cols=113 Identities=18% Similarity=0.128 Sum_probs=84.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
+++++||||+|+||.++++.|++.|++|++++|++.. ..+....+ ...++.++.+|+++++++.+++++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEK----VDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998622 11111111 124567899999999999888764
Q ss_pred --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCc
Q 033236 76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMI 119 (124)
Q Consensus 76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~ 119 (124)
+|++||++|... .++.|+.++.++++++.+.- .-.+++++||..
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 699999997421 13478888888888876531 125888888754
No 179
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.63 E-value=1.5e-15 Score=104.64 Aligned_cols=92 Identities=25% Similarity=0.334 Sum_probs=76.7
Q ss_pred EEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEEeCc
Q 033236 7 LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVICTIS 84 (124)
Q Consensus 7 li~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~~a~ 84 (124)
+||||+|+||+++++.|++.|++|++..+.. .+|+.+.+++.++++. +|+|||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 5899999999999999999998877654321 4899999999998874 799999997
Q ss_pred ccc-----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 85 GVH-----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 85 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
... +.+.|..++.+++++|.+.+ ++++|+.||...|
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vy 105 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIY 105 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeec
Confidence 432 23568899999999999998 8999999987655
No 180
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.63 E-value=4.5e-15 Score=94.10 Aligned_cols=115 Identities=17% Similarity=0.236 Sum_probs=86.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
|+++||||++++|+.+++.|+++| +.|+++.|++ ..+...+....+ ...++.++++|++++++++++++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~--~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSE--DSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSC--HHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecc--ccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 6788888881 011222222222 246788999999999999888763
Q ss_pred --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|++|||+|... .++.|+.+...+.+++.+.+ -.+++++||....
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGV 139 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGT
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhc
Confidence 899999998653 23567788888888888855 5789988876543
No 181
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.2e-14 Score=97.80 Aligned_cols=114 Identities=17% Similarity=0.097 Sum_probs=83.6
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||+|+||.++++.|+++|++|++++|+... .....+.+. ...+..+++|+++.+++.++++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG----CQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356889999999999999999999999999999997621 111222221 2357789999999998887765
Q ss_pred ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
++|++||++|... .++.|+.+...+++++. +.+ ..+++++||..
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 147 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVN 147 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchh
Confidence 3799999998431 13456777777776664 333 46888888754
No 182
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.62 E-value=1.1e-14 Score=97.87 Aligned_cols=106 Identities=14% Similarity=0.101 Sum_probs=83.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
++++++|||++|++|+++++.|+++|++|++++|++ . .....++.++++|+++++++.+++++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----------~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----------L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETG 75 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----------h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999875 0 11245688999999999999998764
Q ss_pred -cCEEEEeCccccc--------------eecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|++|||+|.... ++.|..+...+++++.+ .+ ..+++++||..
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~ 137 (252)
T PRK08220 76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNA 137 (252)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCch
Confidence 7999999985421 34567777778877754 33 46899888754
No 183
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.62 E-value=1.5e-14 Score=97.58 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=85.4
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||.++++.|+++|+++++++|+....+. ....... ...++.++.+|+++.+++.++++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~-~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH-VVDEIQQ-LGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999999999999887622111 1111111 13457788999999999888765
Q ss_pred -ccCEEEEeCccccc-------------eecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVHF-------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|++||++|.... ++.|+.+..++++.+.+ .+ ..+++++||...
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~ 149 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAA 149 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccc
Confidence 37999999985321 35678888888888764 33 358998887553
No 184
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.62 E-value=1.8e-14 Score=97.22 Aligned_cols=114 Identities=15% Similarity=0.104 Sum_probs=83.3
Q ss_pred CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++|+++||||+ ++||+++++.|+++|++|++.+|+. ...+.........+.++++|++|+++++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-----RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKE 79 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-----HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHH
Confidence 346789999998 7999999999999999999998874 11122222233467889999999999888765
Q ss_pred ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|..+...+.+++.+.- .-.+++++||..
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 3899999998532 12456777777777776532 124788887654
No 185
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=8.9e-15 Score=101.38 Aligned_cols=118 Identities=12% Similarity=0.024 Sum_probs=85.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------c
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------R 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~ 75 (124)
++++++||||+|+||+++++.|+++|++|++.+++.....+...+.+.. ...++.++.+|++|++++.++++ +
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4688999999999999999999999999999887642211111222211 23467899999999998888875 4
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----------CccEEEEecCCcc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----------NVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~ss~~~ 120 (124)
+|++|||||... .++.|+.++.++++++.+.- .-.+++++||...
T Consensus 90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 158 (306)
T PRK07792 90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG 158 (306)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence 899999998542 13467788888888764321 0147888887543
No 186
>PRK05855 short chain dehydrogenase; Validated
Probab=99.62 E-value=6.2e-15 Score=109.08 Aligned_cols=116 Identities=14% Similarity=0.056 Sum_probs=87.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
.+++++|+||+|+||+++++.|+++|++|++++|+.+.. .+....+ ...++.++.+|++|++++.++++.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAA----ERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999986221 1111111 134678999999999999888764
Q ss_pred ---cCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----CCccEEEEecCCccc
Q 033236 76 ---VDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----GNVKKRKLNEGMIPF 121 (124)
Q Consensus 76 ---~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~~ 121 (124)
+|++|||||.... ++.|+.+..++++++.+. +...++|++||...+
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 456 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY 456 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 7999999986421 347888888888776542 212589999987654
No 187
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.62 E-value=2.1e-14 Score=97.11 Aligned_cols=115 Identities=15% Similarity=0.149 Sum_probs=84.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+++++||||+|++|.++++.|+++|++|++++|++...+. ..+.... ...++.++.+|++|++++.++++ +
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~-~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLAS-LAQELAD-HGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998622111 1111111 23467889999999999888876 4
Q ss_pred cCEEEEeCccccc---------------eecchHHHHHHHHHHHH---hCCccEEEEecCCcc
Q 033236 76 VDVVICTISGVHF---------------RSHNILMQLKLVDAIRE---AGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~---~~~~~~~i~~ss~~~ 120 (124)
+|+||||+|.... .+.|..++.++++.+.+ .+ ..+++++||...
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~ 140 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAG 140 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccc
Confidence 7999999985321 34577888888888754 23 367888876543
No 188
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.8e-14 Score=96.50 Aligned_cols=110 Identities=16% Similarity=0.205 Sum_probs=84.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc----cCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR----VDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~d~v 79 (124)
++++||||+|++|+++++.|+++|++|++++|++ ...+.... ...++.++.+|++|++++.+++++ .|.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~-----~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~ 75 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ-----SVLDELHT-QSANIFTLAFDVTDHPGTKAALSQLPFIPELW 75 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHH-hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence 6799999999999999999999999999999986 22222211 124578999999999999999875 5889
Q ss_pred EEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 80 ICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 80 i~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
+|++|... .++.|..++.++++++.+.- ...+++++||..
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~ 130 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA 130 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh
Confidence 99997431 24567888999999987631 135788777653
No 189
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.62 E-value=3.8e-15 Score=102.97 Aligned_cols=105 Identities=21% Similarity=0.308 Sum_probs=80.3
Q ss_pred EEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEEE
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVVI 80 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi 80 (124)
++||||+|++|+++++.|.++|+ +|++++|..+.. . ... .....+..|+.+++.++.+.+ ++|+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~---~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH---K---FLN---LADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch---h---hhh---hhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 58999999999999999999997 788887765211 0 111 111356788888888888765 799999
Q ss_pred EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+|+.... .+.|+.++.++++++.+.+ + ++|++||...|
T Consensus 72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy 118 (314)
T TIGR02197 72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATY 118 (314)
T ss_pred ECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhc
Confidence 99985422 3467899999999999988 5 79999987655
No 190
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=1.9e-14 Score=97.08 Aligned_cols=120 Identities=12% Similarity=0.055 Sum_probs=85.9
Q ss_pred CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCC-------chHHHHHhhhh--ccCCeEEEEcccCChHHH
Q 033236 1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGL-------DIDKLQMLLSF--KKQGAHLIEASFADHRSL 69 (124)
Q Consensus 1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~ 69 (124)
|++++++||||+| ++|.++++.|+++|++|++++|++.+. ........... ...+++++.+|+++++++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 3567899999995 899999999999999999999873211 11111111111 134588999999999988
Q ss_pred HHHhcc-------cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCcc
Q 033236 70 VEAVKR-------VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMIP 120 (124)
Q Consensus 70 ~~~~~~-------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~ 120 (124)
.++++. +|+|||++|... .++.|+.++..+++++.+.. ...+++++||...
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~ 157 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS 157 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence 887653 799999998531 13477888888888886531 1358999997654
No 191
>PRK07069 short chain dehydrogenase; Validated
Probab=99.62 E-value=8.8e-15 Score=98.20 Aligned_cols=116 Identities=13% Similarity=0.105 Sum_probs=81.1
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------cc
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-------RV 76 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~ 76 (124)
+++||||+|++|+++++.|+++|++|++++|++.+..+...+...... ...+..+++|++|++++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 389999999999999999999999999999984221111111111111 1234568899999999888775 37
Q ss_pred CEEEEeCccccc--------------eecchH----HHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 77 DVVICTISGVHF--------------RSHNIL----MQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 77 d~vi~~a~~~~~--------------~~~~~~----~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|++||++|.... ++.|.. .+..+++.+.+.+ .++++++||...+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~ 142 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAF 142 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhc
Confidence 999999985421 224444 5666777777666 6799999976543
No 192
>PRK12742 oxidoreductase; Provisional
Probab=99.61 E-value=2e-14 Score=95.77 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=81.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~ 78 (124)
++++++||||+|+||+++++.|+++|++|+++.++. ....+.+.. ..++.++.+|++|++++.++++. +|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS----KDAAERLAQ--ETGATAVQTDSADRDAVIDVVRKSGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC----HHHHHHHHH--HhCCeEEecCCCCHHHHHHHHHHhCCCcE
Confidence 468899999999999999999999999998876643 122222111 22467889999999988887753 899
Q ss_pred EEEeCcccc--------------ceecchHHHHHHHHHHHHh-CCccEEEEecCCc
Q 033236 79 VICTISGVH--------------FRSHNILMQLKLVDAIREA-GNVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ss~~ 119 (124)
+||++|... .++.|+.+...+++.+.+. ....+++++||..
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 999998532 1345677777777666654 1135888888654
No 193
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.7e-14 Score=97.11 Aligned_cols=116 Identities=13% Similarity=0.134 Sum_probs=85.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------c
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
+|+++|||++|++|+++++.|++.|++|++++|++...+.. .+.... ...++.++++|+++++++.++++ +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEA-KLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999986221111 111111 13468899999999999988775 4
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
+|++||++|... .++.|..+..++++++.+. +...+++++||...
T Consensus 79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 141 (252)
T PRK07677 79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA 141 (252)
T ss_pred ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh
Confidence 799999997421 2456788888888888542 21358888887653
No 194
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2.7e-14 Score=97.39 Aligned_cols=116 Identities=11% Similarity=0.086 Sum_probs=84.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchH--HH-HHhhhh--ccCCeEEEEcccCChHHHHHHhc---
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDID--KL-QMLLSF--KKQGAHLIEASFADHRSLVEAVK--- 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~--~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~--- 74 (124)
+++++||||+|++|.++++.|+++|++|++++|+....... .. +..... ...++.++.+|+++++++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 85 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV 85 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999986321110 01 111111 23467889999999999988876
Q ss_pred ----ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh---CCccEEEEecCC
Q 033236 75 ----RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA---GNVKKRKLNEGM 118 (124)
Q Consensus 75 ----~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~i~~ss~ 118 (124)
++|++||++|... .++.|+.++.++++++.+. ..-.+++++||.
T Consensus 86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 150 (273)
T PRK08278 86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP 150 (273)
T ss_pred HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 4899999998532 1346788888888888643 112478877754
No 195
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2e-14 Score=96.89 Aligned_cols=98 Identities=18% Similarity=0.233 Sum_probs=76.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
|++++++||||+|+||+++++.|+++|++|++++|++.. ..... .......+.+|++|.+++.+.+.++|++|
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~iDilV 84 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN----NSESN---DESPNEWIKWECGKEESLDKQLASLDVLI 84 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh----hhhhh---ccCCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence 346889999999999999999999999999999987611 11111 11122578999999999999999999999
Q ss_pred EeCcccc-----------ceecchHHHHHHHHHHHH
Q 033236 81 CTISGVH-----------FRSHNILMQLKLVDAIRE 105 (124)
Q Consensus 81 ~~a~~~~-----------~~~~~~~~~~~~~~~~~~ 105 (124)
||||... .++.|+.++.++++++.+
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 85 LNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred ECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9998531 246788888888888765
No 196
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.3e-14 Score=98.06 Aligned_cols=115 Identities=18% Similarity=0.105 Sum_probs=82.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
+|+++||||+|++|+++++.|++.|++|+++.+...+......+... ....++.++.+|++|++++.+++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIR-ALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999998877654211111111111 1234688899999999999888763
Q ss_pred cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCC
Q 033236 76 VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGM 118 (124)
Q Consensus 76 ~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~ 118 (124)
+|++|||+|... .++.|+.++.++++++.+.. .-.+++++++.
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~ 147 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQ 147 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECch
Confidence 799999998532 23568888888888877642 12477777654
No 197
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.7e-14 Score=96.94 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=79.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc-------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV------- 76 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------- 76 (124)
|+++||||+|++|++++++|+++|++|++++|++. ............+++++.+|+++++++.++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN----KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED 77 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch----HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 68999999999999999999999999999998762 2222222212356889999999999999888642
Q ss_pred --C--EEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 77 --D--VVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 77 --d--~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+ ++|+++|... .++.|..+...+++.+.+ .+...+++++||..
T Consensus 78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (251)
T PRK06924 78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGA 143 (251)
T ss_pred cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchh
Confidence 1 7888887531 134466665555555443 22135889888754
No 198
>PRK08017 oxidoreductase; Provisional
Probab=99.61 E-value=1.2e-14 Score=97.95 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=79.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
.++++||||+|++|+++++.|+++|++|++++|++ .+.+.. ...+++.+.+|++|++++.++++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~-----~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKP-----DDVARM---NSLGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHhHHH---HhCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999986 222222 223578899999999887776543
Q ss_pred -cCEEEEeCcccc--------------ceecchHHHHHH----HHHHHHhCCccEEEEecCCc
Q 033236 76 -VDVVICTISGVH--------------FRSHNILMQLKL----VDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~i~~ss~~ 119 (124)
+|.++|++|... ..+.|+.++.++ ++.+.+.+ .++++++||..
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~ 135 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVM 135 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcc
Confidence 589999998432 124455665554 55555566 67899998754
No 199
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.5e-14 Score=97.04 Aligned_cols=117 Identities=11% Similarity=0.067 Sum_probs=81.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
|+++++|||++|+||.+++++|+++|+.|++..+++.+........... ...++.++.+|++|++++.++++
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999998877765441111111111111 13457789999999999998876
Q ss_pred ccCEEEEeCccccc---------------eecchHHHHHHHHHHHHhC------CccEEEEecCCc
Q 033236 75 RVDVVICTISGVHF---------------RSHNILMQLKLVDAIREAG------NVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~~---------------~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~ 119 (124)
++|++||++|.... ++.|+.++.++++++.+.- .-.+++++||..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~ 145 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMA 145 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchh
Confidence 47999999985421 3467788888887776541 013688888754
No 200
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.61 E-value=2.3e-14 Score=96.61 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=84.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++|+||+|++|+++++.|+++|++|+++.|++. ...+....+ ...++..+.+|+++++++.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVE----RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999862 211111111 13467899999999999988876
Q ss_pred ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----C-------CccEEEEecCCcc
Q 033236 75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----G-------NVKKRKLNEGMIP 120 (124)
Q Consensus 75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~-------~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|+.+..++.+.+.+. . ...+++++||...
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~ 156 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG 156 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc
Confidence 4899999998432 1345677777777766532 1 0248888887643
No 201
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.61 E-value=1.2e-14 Score=97.24 Aligned_cols=114 Identities=14% Similarity=0.094 Sum_probs=79.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
++++||||+|++|+++++.|+++|++|+++ .|+++. ..+....... ....+.++.+|++|++++.+++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHA-AQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999875 454411 1111111111 133578899999999999988764
Q ss_pred cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC------CccEEEEecCCc
Q 033236 76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG------NVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~------~~~~~i~~ss~~ 119 (124)
+|++||++|... ..+.|+.++..+++.+.+.. ...+++++||..
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~ 144 (247)
T PRK09730 80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAA 144 (247)
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence 689999998531 23456777766666665431 124689988754
No 202
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.60 E-value=3.7e-14 Score=95.74 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=80.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
+++++|||++|+||.++++.|+++|++|+++.+++........+..+.+. +.++.++++|+++++++.++++
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 57899999999999999999999999977776654322222222222221 3467889999999999988875
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC-CccEEEEe
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG-NVKKRKLN 115 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 115 (124)
++|++||++|... .++.|..++..+++++.+.- ...+++++
T Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~ 144 (257)
T PRK12744 88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTL 144 (257)
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEE
Confidence 4899999998531 13468888888888887541 11355544
No 203
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.60 E-value=3e-15 Score=102.93 Aligned_cols=93 Identities=20% Similarity=0.324 Sum_probs=74.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 81 (124)
|+++|+|++|++|+++.+.|.+.|++++...|. ..|+.|.+.+.+.++. +|+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 789999999999999999999999999988664 6899999999999875 899999
Q ss_pred eCcccc----------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 82 TISGVH----------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 82 ~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
||+..+ .+..|+.++.++++.|.+.+ .++||+||..+|
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VF 105 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVF 105 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEE
Confidence 998643 24678999999999999998 489999987654
No 204
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.4e-14 Score=99.50 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=83.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC-----CCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI-----GLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~ 74 (124)
++++++||||+++||.++++.|++.|++|++.+|+.+ +......+....+ ...++.++.+|++|++++.++++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 4678999999999999999999999999999887641 0001111112222 13457789999999998888765
Q ss_pred -------ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CC-----ccEEEEecCCc
Q 033236 75 -------RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GN-----VKKRKLNEGMI 119 (124)
Q Consensus 75 -------~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~-----~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|+.+...+.+++.+. +. -.++|++||..
T Consensus 85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 159 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGA 159 (286)
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchh
Confidence 3799999998542 1356788887777776532 10 14789888754
No 205
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.60 E-value=3.3e-14 Score=96.22 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=81.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
|++++++||||+|+||.++++.|+++|++|++..|+..+......+.+.. ...++.++.+|++|++++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999999988888652111111111211 13457789999999999888775
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHH----HHHHhCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVD----AIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|+.+...+.+ .+.+.+.-.+++++||...
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~ 148 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHE 148 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 3799999998531 13456655554444 4444432358888887543
No 206
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.60 E-value=2e-14 Score=102.80 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=78.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
++|+++||||+|++|+++++.|+++|++|++++|++. ........ ...++..+.+|++|++++.+.+.++|++||
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~----~l~~~~~~-~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSD----KITLEING-EDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHhh-cCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 4688999999999999999999999999999998762 11111111 123467889999999999999999999999
Q ss_pred eCccc-----------cceecchHHHHHHHHHHHH
Q 033236 82 TISGV-----------HFRSHNILMQLKLVDAIRE 105 (124)
Q Consensus 82 ~a~~~-----------~~~~~~~~~~~~~~~~~~~ 105 (124)
|+|.. ..++.|..++.++++++.+
T Consensus 252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99853 2346788999888888764
No 207
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.59 E-value=3.5e-14 Score=98.74 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=84.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|+++++||||+++||.++++.|+++| ++|++.+|+... ..+....+ ....+.++.+|+++.++++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK----AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH----HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 57889999999999999999999999 999999998621 11112222 23457789999999998888764
Q ss_pred ---ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hC-CccEEEEecCCcc
Q 033236 75 ---RVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AG-NVKKRKLNEGMIP 120 (124)
Q Consensus 75 ---~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~-~~~~~i~~ss~~~ 120 (124)
++|++|||||... .++.|..+...+++.+.+ .+ ...++|++||...
T Consensus 78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~ 146 (314)
T TIGR01289 78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG 146 (314)
T ss_pred hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc
Confidence 3899999998531 135677777777666544 21 0258999997653
No 208
>PLN02778 3,5-epimerase/4-reductase
Probab=99.59 E-value=1.4e-14 Score=100.13 Aligned_cols=88 Identities=24% Similarity=0.273 Sum_probs=67.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 80 (124)
.|+++||||+|++|+++++.|+++|++|+...+ |+.+.+.+...++ ++|+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~Vi 62 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVF 62 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEE
Confidence 478999999999999999999999999865322 2334444555554 689999
Q ss_pred EeCcccc-------------ceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 81 CTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 81 ~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
|+|+... ++..|+.++.+++++|.+.+ +++++++|+
T Consensus 63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~ 111 (298)
T PLN02778 63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATG 111 (298)
T ss_pred ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecc
Confidence 9998642 13468999999999999998 776666553
No 209
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.59 E-value=2.9e-14 Score=96.81 Aligned_cols=117 Identities=16% Similarity=0.166 Sum_probs=87.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.++.++||||++++|+.++.+++++|..+.+.+.+.++-.+.. +..... ..+....||+++++++.+..+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv-~~~~~~--g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETV-KEIRKI--GEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHH-HHHHhc--CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3678999999999999999999999999999998885543332 222221 368899999999998887765
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCcccc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~~ 122 (124)
++|++|||||... .+++|+.+...++++. .+.+ -.|+|-++|...++
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~ 178 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLF 178 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhccc
Confidence 3899999999652 2466766665555554 4444 47999998876543
No 210
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.7e-14 Score=108.65 Aligned_cols=116 Identities=17% Similarity=0.186 Sum_probs=86.2
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||+|++|+++++.|+++|++|++++|++... .+..... ...++.++.+|++|++++.++++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL----DELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999986221 1111111 23468899999999999998876
Q ss_pred ---ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCccc
Q 033236 75 ---RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 75 ---~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~~ 121 (124)
++|++|||+|... .++.|+.++.++++++. +.+ ..++|++||...+
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~ 513 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQ 513 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhc
Confidence 4899999998531 12356777776666654 344 5789999986544
No 211
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.59 E-value=3.9e-14 Score=94.50 Aligned_cols=111 Identities=19% Similarity=0.228 Sum_probs=80.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
|+|+++||||+|+||+++++.|+++|++|++++|++.. ..+.. ...++.++.+|++|++++.++++.
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP----AIDGL---RQAGAQCIQADFSTNAGIMAFIDELKQHTD 73 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh----HHHHH---HHcCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence 45789999999999999999999999999999998632 11222 123467899999999988887653
Q ss_pred -cCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----C-CccEEEEecCCc
Q 033236 76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----G-NVKKRKLNEGMI 119 (124)
Q Consensus 76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~-~~~~~i~~ss~~ 119 (124)
+|++|||+|.... ++.|+.+...+.+.+.+. + ...+++++||..
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~ 137 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYV 137 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchh
Confidence 7999999985311 235566666665555442 1 024788888654
No 212
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.58 E-value=6e-14 Score=94.84 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=83.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 78 (124)
++++++|+|++|++|+++++.|++.|++|++++|++...+ ...+.+......++.++.+|+++++++.++++ ++|+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE-ALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 4578999999999999999999999999999999862111 11111111123467899999999999988876 4899
Q ss_pred EEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 79 VICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
+|||+|... .++.|+.+...+++.+. +.+ ..+++++||..
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~ 142 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAA 142 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCcc
Confidence 999998532 13456777777777664 333 35788888654
No 213
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.58 E-value=4.1e-14 Score=95.81 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=82.7
Q ss_pred CCCceEEEEccCC-hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTG-YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g-~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||+| +||+++++.|+++|++|++.+|+....+.. .+.... ....++.++++|+++++++.++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGET-ADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 3568899999996 899999999999999999998876221111 111111 122467899999999999988775
Q ss_pred ---ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|+.+...+++.+.+. +...+++++||..
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~ 159 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVL 159 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchh
Confidence 4799999998531 1245677777777776542 1124788877654
No 214
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.58 E-value=2.9e-14 Score=94.88 Aligned_cols=112 Identities=15% Similarity=0.153 Sum_probs=82.2
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------cCE
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------VDV 78 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d~ 78 (124)
++|||++|++|+++++.|+++|++|++++|++.+......+..+. ...++..+.+|++|++++++++++ +|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999999988752211111111111 123578999999999999888764 699
Q ss_pred EEEeCcccc--------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCc
Q 033236 79 VICTISGVH--------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~ 119 (124)
|||++|... .++.|..+..++++.+.+. + .++++++||..
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~ 137 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVV 137 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCcc
Confidence 999998642 1346778888888887653 3 46899998764
No 215
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.9e-14 Score=94.68 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=82.9
Q ss_pred EEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc---cCEEEEe
Q 033236 7 LVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR---VDVVICT 82 (124)
Q Consensus 7 li~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~---~d~vi~~ 82 (124)
+||||+|++|++++++|+++|++|++++|++. .......... ..+++++.+|+++++++.++++. +|++||+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRD----RLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 58999999999999999999999999999862 2111111111 35688999999999999999875 7999999
Q ss_pred Ccccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 83 ISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 83 a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|... .++.|..+..++.++....+ ..+++++||...+
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~ 128 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAV 128 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhc
Confidence 98532 13456778888888554444 5799999876543
No 216
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.2e-14 Score=96.86 Aligned_cols=118 Identities=17% Similarity=0.131 Sum_probs=84.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|++++++|+|++|+||+.+++.|+++|++ |++++|++.... ...+.... ....+.++.+|+++++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEA-LGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999988 999998762111 11111111 23457789999999999988876
Q ss_pred --ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC----CccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG----NVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ss~~~ 120 (124)
++|++||++|... .++.|..+..++++++.+.. ...+++++||...
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~ 147 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA 147 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc
Confidence 4799999998532 13467778888877775432 1247888887654
No 217
>PRK06484 short chain dehydrogenase; Validated
Probab=99.58 E-value=4.4e-14 Score=103.89 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=86.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
+++++||||+|+||.++++.|+++|++|++++|++ ...+............+.+|++|++++.++++.
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA-----EGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999986 222222221234567789999999999888763
Q ss_pred cCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236 76 VDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF 121 (124)
Q Consensus 76 ~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~ 121 (124)
+|++|||||... .++.|+.++.++++.+.+.- ...++|++||...+
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 405 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL 405 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence 799999998541 13568888888888887642 13589999976543
No 218
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.58 E-value=7.6e-14 Score=94.39 Aligned_cols=79 Identities=22% Similarity=0.296 Sum_probs=62.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------c
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK-------R 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-------~ 75 (124)
|+++||||+|+||+++++.|+++|++|++++|++.. ..+..+.+. ..++.++.+|++|+++++++++ +
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~ 76 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN----LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGG 76 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 589999999999999999999999999999998622 111112221 2357889999999999988875 4
Q ss_pred cCEEEEeCccc
Q 033236 76 VDVVICTISGV 86 (124)
Q Consensus 76 ~d~vi~~a~~~ 86 (124)
+|++|||+|..
T Consensus 77 id~li~naG~~ 87 (259)
T PRK08340 77 IDALVWNAGNV 87 (259)
T ss_pred CCEEEECCCCC
Confidence 89999999853
No 219
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.57 E-value=4e-14 Score=95.06 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=81.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC--ChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA--DHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~----- 74 (124)
++++++|||++|++|.++++.|++.|++|++++|++...+ ...+.+......++.++.+|++ +++++.++++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLE-AVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999872211 1111122222345677888886 5665555543
Q ss_pred --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~ 119 (124)
++|+|||+++... .++.|+.++.++++++. +.+ ..+++++||..
T Consensus 90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~ 154 (247)
T PRK08945 90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSV 154 (247)
T ss_pred hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHh
Confidence 4899999997531 13467778777777664 345 67899988754
No 220
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.57 E-value=9.5e-14 Score=92.14 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=81.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccCE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVDV 78 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~ 78 (124)
++++|||++|++|+++++.|+++|++|++++|++... +.... ..++.+..+|++|+++++++++ ++|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~ 74 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD-----TALQA--LPGVHIEKLDMNDPASLDQLLQRLQGQRFDL 74 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch-----HHHHh--ccccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence 6899999999999999999999999999999987322 11111 2356788899999998888876 4899
Q ss_pred EEEeCcccc----------------ceecchHHHHHHHHHHHHhC--CccEEEEecCC
Q 033236 79 VICTISGVH----------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGM 118 (124)
Q Consensus 79 vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~ 118 (124)
|||++|... .+..|..+...+.+++.+.- ...+++++||.
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~ 132 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ 132 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC
Confidence 999997531 13456777888888776431 02467777764
No 221
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.57 E-value=3e-14 Score=99.40 Aligned_cols=116 Identities=16% Similarity=0.083 Sum_probs=79.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCC--hHHHHHH---hcc-
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFAD--HRSLVEA---VKR- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~--~~~~~~~---~~~- 75 (124)
++.++||||+|+||++++++|+++|++|++++|+++..+... +..... ....+..+.+|+++ .+.++++ +.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~-~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVS-DSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 578999999999999999999999999999999873221111 111111 12356788899985 3444433 333
Q ss_pred -cCEEEEeCcccc----------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 76 -VDVVICTISGVH----------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 -~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
+|++|||||... .++.|+.++..+.+++.+ .+ ..++|++||...
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~ 196 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAA 196 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhh
Confidence 569999998531 124577788777777654 44 468999987654
No 222
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.57 E-value=7.7e-14 Score=92.42 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=81.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----ccCE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-----RVDV 78 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~d~ 78 (124)
++++|||++|++|+++++.|++.|++|++++|+++ ..+ .....+++++.+|+++++++.++++ ++|+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~-----~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~ 73 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAA-----ALA---ALQALGAEALALDVADPASVAGLAWKLDGEALDA 73 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH-----HHH---HHHhccceEEEecCCCHHHHHHHHHHhcCCCCCE
Confidence 68999999999999999999999999999999862 111 1222356789999999999988643 3899
Q ss_pred EEEeCcccc----------------ceecchHHHHHHHHHHHHh--CCccEEEEecCCc
Q 033236 79 VICTISGVH----------------FRSHNILMQLKLVDAIREA--GNVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~ 119 (124)
+||++|... .++.|+.++.++++++.+. ....+++++||..
T Consensus 74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~ 132 (222)
T PRK06953 74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM 132 (222)
T ss_pred EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc
Confidence 999998641 1346778888888888652 1124678877653
No 223
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.57 E-value=3.5e-14 Score=96.04 Aligned_cols=110 Identities=24% Similarity=0.300 Sum_probs=92.7
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
..-|+||+|++|+.+++.|.+.|.+|++-.|.+ +....++....+. .+.+...|+.|+++++++++..++|||..
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d----~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGD----EYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCC----ccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 467999999999999999999999999999876 2223333333333 47899999999999999999999999999
Q ss_pred cc------ccceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 84 SG------VHFRSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 84 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
|. .++.++|..+.+.+++-|++.| +.|+|++|...
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lg 179 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLG 179 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcc
Confidence 83 2567899999999999999999 99999999653
No 224
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.57 E-value=1.1e-13 Score=94.60 Aligned_cols=116 Identities=14% Similarity=0.071 Sum_probs=82.8
Q ss_pred CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---
Q 033236 1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--- 75 (124)
Q Consensus 1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 75 (124)
|++|+++||||+ ++||+++++.|+++|++|++.+|+... ....+......... ..+++|++|++++.++++.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 457899999997 799999999999999999999887411 11222221111222 5789999999998888753
Q ss_pred ----cCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 76 ----VDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 76 ----~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
+|++|||||... .++.|+.+...+.+.+.+.- .-.+++++||..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 799999998531 13567888888887776532 124788888654
No 225
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=4.3e-14 Score=94.13 Aligned_cols=107 Identities=21% Similarity=0.202 Sum_probs=81.0
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-HHHHHHhcccCEE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-RSLVEAVKRVDVV 79 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~d~v 79 (124)
|++++++|||++|+||+++++.|+++|++|++++|++... ...++..+.+|++++ +.+.+.+.++|++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~l 71 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDIL 71 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence 3567899999999999999999999999999999876211 124578999999987 4444555579999
Q ss_pred EEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 80 ICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 80 i~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
||++|... .++.|..++.++++++.+ .+ ..+++++||..
T Consensus 72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~ 129 (235)
T PRK06550 72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIA 129 (235)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChh
Confidence 99998431 134577788888887754 33 35899988754
No 226
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.57 E-value=1.7e-13 Score=92.77 Aligned_cols=117 Identities=9% Similarity=0.011 Sum_probs=81.5
Q ss_pred CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
++|+++||||+ ++||.++++.|+++|++|++.+|+.... ....+........++..+++|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 46789999997 8999999999999999999988764221 111122222223467889999999999888875
Q ss_pred --ccCEEEEeCcccc-------c-----------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH-------F-----------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~-------~-----------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||+|... . ++.|..+...+++++.+.- .-.++|++||..
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 3899999998431 1 1345566666666665432 125899888754
No 227
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.56 E-value=5.8e-14 Score=95.63 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=81.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------c
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------V 76 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~ 76 (124)
|+++||||+|++|.++++.|+++|++|++++|+++..+ ...+...........++.+|+++++++.++++. +
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLA-QTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999999998762111 111111111122345688999999988877653 7
Q ss_pred CEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 77 DVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 77 d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
|++||++|... .++.|+.+...+++++.+ .+...+++++||..
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 99999998532 235678888888888753 22135899888754
No 228
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.56 E-value=4.6e-14 Score=106.78 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=81.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.+++++||||+|+||+++++.|+++|++|++++|+....+....+.........+..+.+|++|++++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999999862211111111111122357789999999999998886
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|++|||||.... ++.|..+...+.+.+ .+.+...+++++||..
T Consensus 493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~ 555 (676)
T TIGR02632 493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKN 555 (676)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChh
Confidence 48999999985421 234555555554444 3333124799988754
No 229
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.56 E-value=9.4e-14 Score=93.42 Aligned_cols=112 Identities=17% Similarity=0.136 Sum_probs=81.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++|+|++|+||.++++.|++.|++|+++.|++. ...+....+ ...++.++.+|++|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEE----TAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999998752 221222222 13457899999999999988765
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
++|+|||++|... .++.|+.+...+++++.+ .+...+++++||..
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 139 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIA 139 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchh
Confidence 3799999998531 134667777666666543 23125888888643
No 230
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.56 E-value=1e-13 Score=92.50 Aligned_cols=112 Identities=19% Similarity=0.156 Sum_probs=79.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc-------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
|+++|||++|++|+++++.|+++|++|+++.|..+ ....+..... ...++.++.+|+++++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE---ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999888331 1111111111 23468899999999998888765
Q ss_pred ccCEEEEeCccccc--------------eecchHHHHHHHHHH----HHhCCccEEEEecCCc
Q 033236 75 RVDVVICTISGVHF--------------RSHNILMQLKLVDAI----REAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~ 119 (124)
++|+|||++|.... ...|..+...+.+.+ .+.+ ..+++++||..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~ 139 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVN 139 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchh
Confidence 37999999985421 234666666554444 4445 57899998754
No 231
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.56 E-value=1.9e-13 Score=92.65 Aligned_cols=117 Identities=15% Similarity=0.066 Sum_probs=82.2
Q ss_pred CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCC-CchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIG-LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
++++++||||+ ++||+++++.|+++|++|++..|++.. ...+..+.... ......++++|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 46789999986 899999999999999999888765421 11112222211 11346688999999999988875
Q ss_pred ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|..+...+.+++.+.- .-.+++++||..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 3899999998531 13567788877777776531 025888888754
No 232
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.55 E-value=1.3e-13 Score=94.09 Aligned_cols=116 Identities=14% Similarity=0.040 Sum_probs=80.5
Q ss_pred CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||++ +||+++++.|+++|++|++.+|+... ....+.... .......+++|++|++++.++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~--~~~~~~~~~-~~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL--GKRVKPLAE-SLGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH--HHHHHHHHH-hcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 3467899999996 99999999999999999998886411 111111111 11123478999999999988875
Q ss_pred ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|..+..++++++.+.- .-.++|++||..
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 3899999998531 12456777777777665431 014788888654
No 233
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.1e-13 Score=91.92 Aligned_cols=109 Identities=20% Similarity=0.192 Sum_probs=80.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~v 79 (124)
|+++||||+|++|+++++.|+++|++|++.+|++ ...+... ...++.++++|+++++++.++++ ++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~-----~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR-----DDLEVAA--KELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHH--HhccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 4799999999999999999999999999999986 1111111 11246788999999999998876 48999
Q ss_pred EEeCcccc-------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 80 ICTISGVH-------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 80 i~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
|||+|+.. .++.|..+..++++++.+.- .-.+++++||..
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 133 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN 133 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence 99987310 12456777778888776531 125888888654
No 234
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.55 E-value=1.3e-13 Score=87.43 Aligned_cols=114 Identities=16% Similarity=0.149 Sum_probs=84.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHH--HHhhhhccCCeEEEEcccCChHHHHHHhcc-----
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKL--QMLLSFKKQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
++++|+||+|++|.++++.|+++|+ .|+++.|++........ +.... ...++.++.+|+++++++.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999985 68888887643322111 11111 234677899999999888887654
Q ss_pred --cCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 76 --VDVVICTISGVH--------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 --~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
+|.++|++|... ..+.|+.+..++++++.+.+ .++++++||..
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~ 138 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVA 138 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHH
Confidence 699999998432 24567889999999997776 67888888654
No 235
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.1e-13 Score=94.57 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=80.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK----- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~----- 74 (124)
|+|+++|||+ |+||+++++.|. +|++|++++|++... .+..+.+. ..++.++++|++|++++.++++
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~ 74 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENL----EAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL 74 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence 4578899997 799999999996 799999999976221 11112222 3357889999999999988875
Q ss_pred -ccCEEEEeCcccc-------ceecchHHHHHHHHHHHHhC-CccEEEEecCC
Q 033236 75 -RVDVVICTISGVH-------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGM 118 (124)
Q Consensus 75 -~~d~vi~~a~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~ 118 (124)
++|++|||||... .++.|..++.++++.+.+.- .-.+++++||.
T Consensus 75 g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 75 GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred CCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 4899999998542 34678899999888887641 01345555543
No 236
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=1e-13 Score=100.57 Aligned_cols=113 Identities=18% Similarity=0.262 Sum_probs=84.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
++++++|||++|+||..+++.|+++|++|++++++... ....... ...+...+.+|+++++++.++++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~---~~l~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG---EALAAVA--NRVGGTALALDITAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH---HHHHHHH--HHcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999885311 1111111 12234688999999998888775
Q ss_pred ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHHhC---CccEEEEecCCc
Q 033236 75 RVDVVICTISGVH--------------FRSHNILMQLKLVDAIREAG---NVKKRKLNEGMI 119 (124)
Q Consensus 75 ~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|+.++.++.+++.+.. .-.++|++||..
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~ 345 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSIS 345 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChh
Confidence 4899999998542 13578889999999987643 125899888754
No 237
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.55 E-value=1.3e-13 Score=87.75 Aligned_cols=107 Identities=25% Similarity=0.381 Sum_probs=86.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
||+.|+||+|..|++++++..++|++|+++.|++ .+... -+++.+++.|+.|++++.+.+.+.|+||...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~--------~K~~~--~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~ 70 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNA--------SKLAA--RQGVTILQKDIFDLTSLASDLAGHDAVISAF 70 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeCh--------Hhccc--cccceeecccccChhhhHhhhcCCceEEEec
Confidence 6899999999999999999999999999999998 22222 1567899999999999999999999999988
Q ss_pred ccccc--eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 84 SGVHF--RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 84 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+.... .+........+++.+..++ +.|++.+.+....
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL 109 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSL 109 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccce
Confidence 75421 1222444666888888888 8999999865443
No 238
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.54 E-value=9.4e-14 Score=92.71 Aligned_cols=112 Identities=16% Similarity=0.096 Sum_probs=80.4
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------cCE
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------VDV 78 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d~ 78 (124)
++||||+|+||.++++.|+++|++|++++|+.++......+.+.. ...++.++.+|+++++++.++++. +|.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999998887652211111111111 234688999999999998887653 799
Q ss_pred EEEeCcccc--------------ceecchHHHHHHHHHHH-----HhCCccEEEEecCCc
Q 033236 79 VICTISGVH--------------FRSHNILMQLKLVDAIR-----EAGNVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ss~~ 119 (124)
++|++|... .++.|+.++.++++++. +.+ ..+++++||..
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~ 138 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVS 138 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchh
Confidence 999998432 13467788888877653 123 46889888754
No 239
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.54 E-value=4e-14 Score=95.52 Aligned_cols=109 Identities=19% Similarity=0.335 Sum_probs=85.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
++++|+||||+||||+|+++.|..+|++|++++.... .......++ ..++++.+.-|+..+ ++..+|.|+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ft----g~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~Iy 96 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFT----GRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIY 96 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccc----cchhhcchhccCcceeEEEeechhH-----HHHHhhhhh
Confidence 3578999999999999999999999999999987652 222333333 356788888777555 788899999
Q ss_pred EeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 81 CTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 81 ~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+|.+. +....|..++.+.+..|.+.+ +|+++.|++-+|
T Consensus 97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVY 145 (350)
T KOG1429|consen 97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVY 145 (350)
T ss_pred hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeeccccc
Confidence 998644 234578999999999999988 789988876655
No 240
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.54 E-value=6.3e-14 Score=95.27 Aligned_cols=92 Identities=22% Similarity=0.263 Sum_probs=79.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~vi~ 81 (124)
|+++|||++|.+|..|.+.|. .+++|+.++|.+ +|++|++.+.+++++ +|+|||
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~~PDvVIn 56 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRETRPDVVIN 56 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhhCCCEEEE
Confidence 349999999999999999998 678999988853 899999999999984 799999
Q ss_pred eCccccc----------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 82 TISGVHF----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 82 ~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
+|+.+.. +..|..+..+++++|.+.| -++|++|+-.+|
T Consensus 57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVF 104 (281)
T COG1091 57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVF 104 (281)
T ss_pred CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEe
Confidence 9986643 4589999999999999999 589999975543
No 241
>PRK06484 short chain dehydrogenase; Validated
Probab=99.53 E-value=2e-13 Score=100.51 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=84.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
++++++|||++++||.++++.|+++|++|++++|+... ..+.... ...++..+++|+++++++.++++.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER----ARERADS-LGPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHH-hCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999998621 1122211 134567899999999998888753
Q ss_pred -cCEEEEeCcccc----------------ceecchHHHHHHHHHHHHh----CCccEEEEecCCcc
Q 033236 76 -VDVVICTISGVH----------------FRSHNILMQLKLVDAIREA----GNVKKRKLNEGMIP 120 (124)
Q Consensus 76 -~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~~~----~~~~~~i~~ss~~~ 120 (124)
+|++|||+|... .++.|+.++..+++++.+. +.-.+++++||...
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~ 144 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAG 144 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCccc
Confidence 899999998521 1346778888777777653 31138999887653
No 242
>PRK08324 short chain dehydrogenase; Validated
Probab=99.53 E-value=1.8e-13 Score=103.78 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=85.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
.+++++||||+|+||+++++.|+++|++|++++|++.. .......+.. .++.++.+|+++++++.++++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~----~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA----AEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH----HHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999998722 1111111111 368899999999999888776
Q ss_pred -ccCEEEEeCcccc--------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGVH--------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|+||||+|... .++.|..+..++++++.+ .+.-.+++++||...
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 4899999998432 235678888888776653 331158998887643
No 243
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.53 E-value=3.2e-14 Score=97.32 Aligned_cols=99 Identities=28% Similarity=0.323 Sum_probs=70.4
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeCcc
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTISG 85 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 85 (124)
++||||+|+||+++++.|+++|++|++++|++..... . ... .+ .|... +...+.+.++|+|||+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~---~~~--~~--~~~~~-~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN-----T---KWE--GY--KPWAP-LAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc-----c---cce--ee--ecccc-cchhhhcCCCCEEEECCCC
Confidence 5899999999999999999999999999998733211 0 001 11 12222 4455677889999999985
Q ss_pred cc------------ceecchHHHHHHHHHHHHhCCcc--EEEEecCC
Q 033236 86 VH------------FRSHNILMQLKLVDAIREAGNVK--KRKLNEGM 118 (124)
Q Consensus 86 ~~------------~~~~~~~~~~~~~~~~~~~~~~~--~~i~~ss~ 118 (124)
.. +++.|+.++.++++++.+.+ ++ +++++|+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~ 113 (292)
T TIGR01777 68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAV 113 (292)
T ss_pred CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeE
Confidence 32 13457899999999999988 53 45555543
No 244
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.53 E-value=1e-13 Score=89.60 Aligned_cols=114 Identities=14% Similarity=0.193 Sum_probs=78.9
Q ss_pred eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcc------
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
+++|+|+.|++|..+++.|++++ .+++++.|++... ....+....+. ...+.++.+|++|++++.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~-~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS-AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS-TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc-HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 58999999999999999999998 6899999983111 12222333332 45688999999999999999864
Q ss_pred -cCEEEEeCccccc--------------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 76 -VDVVICTISGVHF--------------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 76 -~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
++.|||++|.... ..+-+.+..++.+.+.+.. ++.+++.||...
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~ 139 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISS 139 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhH
Confidence 6889999986421 1234678888888887776 789888887653
No 245
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=3.4e-13 Score=89.90 Aligned_cols=114 Identities=17% Similarity=0.210 Sum_probs=81.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc-----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR----- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~----- 75 (124)
++++++|+|++|++|.++++.|+++|++|++++|++. ......+... ..++.++++|+++++++.+++++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNEN----KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999862 1111111111 23678999999999988887653
Q ss_pred --cCEEEEeCcccc------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 76 --VDVVICTISGVH------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 76 --~d~vi~~a~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
+|.++++++... ..+.|..+...+++.+.+.- .-.+++++||..
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 699999997532 12455666666666665531 024788887653
No 246
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.53 E-value=5.4e-13 Score=92.54 Aligned_cols=116 Identities=16% Similarity=0.039 Sum_probs=79.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCc------hHHHHHhhhhc--cCCeEEEEcccCChHHHHHHh
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLD------IDKLQMLLSFK--KQGAHLIEASFADHRSLVEAV 73 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~------~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~ 73 (124)
.+|+++||||+++||.++++.|++.|++|++++|+..+.. +......+.+. ...+.++++|+++++++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4688999999999999999999999999999999853210 11111111111 234678999999999998887
Q ss_pred c-------ccCEEEEeC-ccc------c-c-----------eecchHHHHHHHHHHHH----hCCccEEEEecCC
Q 033236 74 K-------RVDVVICTI-SGV------H-F-----------RSHNILMQLKLVDAIRE----AGNVKKRKLNEGM 118 (124)
Q Consensus 74 ~-------~~d~vi~~a-~~~------~-~-----------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~ 118 (124)
+ ++|++|||+ |.. . . ++.|+.+...+++++.+ .+ -.+||++||.
T Consensus 87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~ 160 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDG 160 (305)
T ss_pred HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCc
Confidence 5 389999999 631 1 1 13355566666555543 32 3589888874
No 247
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.8e-13 Score=90.37 Aligned_cols=116 Identities=10% Similarity=0.011 Sum_probs=78.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.+++++|||+++++|+++++.|+++|++|+++.|++...++. .+.... ....+..+.+|++++++++++++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~-~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDT-YEQCSA-LTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999987322111 111211 13456788999999998887763
Q ss_pred -ccCEEEEeCcccc---c------------eecchHHHHHHHHH----HHHhCCccEEEEecCCc
Q 033236 75 -RVDVVICTISGVH---F------------RSHNILMQLKLVDA----IREAGNVKKRKLNEGMI 119 (124)
Q Consensus 75 -~~d~vi~~a~~~~---~------------~~~~~~~~~~~~~~----~~~~~~~~~~i~~ss~~ 119 (124)
++|++|||+|... . .+.|..+...+++. +.+.+.-.+++++||..
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~ 146 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHD 146 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 5899999997321 1 11233444444433 33332125888888754
No 248
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.53 E-value=3.8e-13 Score=89.91 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=80.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC--hHHHHHHh-----
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD--HRSLVEAV----- 73 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~----- 73 (124)
|++++++|||++|++|+++++.|+++|++|++++|++...+.. .+.+..........+.+|+++ .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV-YDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHH-HHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 4468899999999999999999999999999999987322111 111111122346678899875 34454443
Q ss_pred ---cccCEEEEeCcccc---------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 74 ---KRVDVVICTISGVH---------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 74 ---~~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
..+|++||++|... .++.|+.+..++++++.+ .+ ..+++++||..
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~ 149 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESH 149 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccc
Confidence 35799999998531 135678887777777754 33 36888888754
No 249
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=3.8e-13 Score=91.12 Aligned_cols=116 Identities=15% Similarity=0.036 Sum_probs=81.6
Q ss_pred CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++|+++||||+ ++||+++++.|+++|++|++.+|+... ....+.... +.....++++|++|++++.++++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~ 84 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAE-ELDAPIFLPLDVREPGQLEAVFARIAE 84 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHHH-hhccceEEecCcCCHHHHHHHHHHHHH
Confidence 356889999998 499999999999999999999987521 111121111 11234678999999999988865
Q ss_pred ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|..+...+.+.+.+.- .-.+++++||..
T Consensus 85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 3799999998531 13467778888777776532 014788887654
No 250
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=4e-13 Score=90.83 Aligned_cols=118 Identities=12% Similarity=0.089 Sum_probs=80.5
Q ss_pred CCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCC------CchH-HHHHhhhh--ccCCeEEEEcccCChHHHH
Q 033236 2 GKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIG------LDID-KLQMLLSF--KKQGAHLIEASFADHRSLV 70 (124)
Q Consensus 2 ~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~------~~~~-~~~~~~~~--~~~~~~~~~~D~~~~~~~~ 70 (124)
++++++||||+| +||.+++++|+++|++|++..|+... .... ..+..+.. ...++.++++|+++++++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 468899999984 89999999999999999887643210 0011 11111122 1345788999999999998
Q ss_pred HHhcc-------cCEEEEeCcccc--------------ceecchHHHHHHHHHHH----HhCCccEEEEecCCcc
Q 033236 71 EAVKR-------VDVVICTISGVH--------------FRSHNILMQLKLVDAIR----EAGNVKKRKLNEGMIP 120 (124)
Q Consensus 71 ~~~~~-------~d~vi~~a~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ss~~~ 120 (124)
++++. +|++||++|... .++.|+.+...+.+++. +.+ ..+++++||...
T Consensus 85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~ 158 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQF 158 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEccccc
Confidence 88753 799999998432 13457777666654443 333 358999987654
No 251
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=1.9e-13 Score=91.72 Aligned_cols=114 Identities=9% Similarity=0.057 Sum_probs=79.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~---- 75 (124)
.+++++|+|++|++|..+++.|+++|++|++++|++.. ........ ...++..+++|+++++++.++++.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEK----LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999988621 11111111 134678899999999888776653
Q ss_pred ---cCEEEEeCcccc-----------------------ceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 76 ---VDVVICTISGVH-----------------------FRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ---~d~vi~~a~~~~-----------------------~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+|+|||++|... .++.|+.+...+.+.+.+ .....+++++||..
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~ 153 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA 153 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc
Confidence 799999998422 123456666655554432 21124688887654
No 252
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=4.2e-13 Score=91.01 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=79.7
Q ss_pred CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++|+++||||++ +||.++++.|+++|++|++.+|+. .. .+..+.+.... ....++++|++|+++++++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~-~~~~~~l~~~~-g~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VL-EKRVKPLAEEI-GCNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HH-HHHHHHHHHhc-CCceEEEccCCCHHHHHHHHHHHHH
Confidence 4568899999997 899999999999999999888763 11 11122221111 122467899999999988875
Q ss_pred ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||+|... .++.|..+...+++++.+.- .-.++|++||..
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~ 149 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYG 149 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCc
Confidence 3899999998531 12456677777777665431 124888888754
No 253
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=5e-13 Score=91.27 Aligned_cols=116 Identities=15% Similarity=0.051 Sum_probs=81.9
Q ss_pred CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|.+|+++||||+ ++||.++++.|+++|++|++..|+... ....+.+.. +......+++|++|++++.++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~--~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL--KKRVEPLAA-ELGAFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH--HHHHHHHHH-hcCCceEEecCCCCHHHHHHHHHHHHH
Confidence 456889999996 899999999999999999888775310 111121111 11235578999999999998875
Q ss_pred ---ccCEEEEeCcccc------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|+.+...+++.+.+.- .-.+++++||..
T Consensus 85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 3899999998532 12467788888888776542 125788887653
No 254
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.51 E-value=5e-13 Score=90.71 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=78.3
Q ss_pred CCCceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++|||| +++||+++++.|+++|++|++..|+.. .....+.+.. .......+++|++|++++.++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK--LEERVRKMAA-ELDSELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH--HHHHHHHHHh-ccCCceEEECCCCCHHHHHHHHHHHHH
Confidence 34678999996 679999999999999999998877531 1112222211 11234578999999999998875
Q ss_pred ---ccCEEEEeCccccc-------------------eecchHHHHHHHHHHHHh--CCccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVHF-------------------RSHNILMQLKLVDAIREA--GNVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~ 119 (124)
++|++|||||.... .+.|..+...+.+.+.+. ....+++++||..
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~ 149 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLG 149 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccc
Confidence 38999999985421 123556666666655432 1125788888654
No 255
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.50 E-value=3.4e-13 Score=91.62 Aligned_cols=82 Identities=18% Similarity=0.205 Sum_probs=57.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHH----HHh------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLV----EAV------ 73 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~------ 73 (124)
+.++||||+|+||+++++.|+++|++|+++.|+..+......+.+..........+.+|++|++++. +++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999887654211111111121111234667899999987553 332
Q ss_pred -cccCEEEEeCcc
Q 033236 74 -KRVDVVICTISG 85 (124)
Q Consensus 74 -~~~d~vi~~a~~ 85 (124)
.++|++|||||.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 248999999984
No 256
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.50 E-value=2.7e-13 Score=91.63 Aligned_cols=115 Identities=16% Similarity=0.125 Sum_probs=78.6
Q ss_pred eEEEEccCChhcHHHHHHHhh----CCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhccc---
Q 033236 5 KVLVVGGTGYIGRRIVKASLA----QGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKRV--- 76 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~--- 76 (124)
.++||||+++||.+++++|++ .|++|+++.|++...+.. .+.+.. .....+.++.+|++++++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~-~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL-KAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH-HHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 579999999999999999997 799999999986322111 111111 11235788999999999988877531
Q ss_pred --------CEEEEeCcccc-----------------ceecchHHHHHHHHHHHHh-----CCccEEEEecCCcc
Q 033236 77 --------DVVICTISGVH-----------------FRSHNILMQLKLVDAIREA-----GNVKKRKLNEGMIP 120 (124)
Q Consensus 77 --------d~vi~~a~~~~-----------------~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~ss~~~ 120 (124)
|++|||||... .++.|+.+...+.+.+.+. +...+++++||...
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~ 154 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA 154 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHh
Confidence 58999998421 1234667776666666543 11247888887643
No 257
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.50 E-value=7.9e-13 Score=89.91 Aligned_cols=116 Identities=14% Similarity=0.088 Sum_probs=79.5
Q ss_pred CCCceEEEEccCC--hhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGGTG--YIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++||||++ +||+++++.|+++|++|++.+|+. .. ....+.... .......+.+|++|+++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hH-HHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 3467899999985 999999999999999999888863 11 112222211 12345688999999999998875
Q ss_pred ---ccCEEEEeCccccc-------------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVHF-------------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||||.... ++.|..+...+.+++.+.- .-.+++++||..
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~ 148 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLG 148 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCC
Confidence 37999999984210 2346666666777664421 124788888654
No 258
>PRK05599 hypothetical protein; Provisional
Probab=99.50 E-value=5.2e-13 Score=89.86 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=76.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------cc
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RV 76 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 76 (124)
|+++||||+++||.+++++|+ +|++|++++|++...+. ..+.++......+.++++|++|+++++++++ ++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQG-LASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHH-HHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999998 59999999998632211 1111222122347889999999998888764 38
Q ss_pred CEEEEeCccccc--------------eecchHHHHHHH----HHHHHhCCccEEEEecCCcc
Q 033236 77 DVVICTISGVHF--------------RSHNILMQLKLV----DAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 77 d~vi~~a~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~i~~ss~~~ 120 (124)
|++|||+|.... ...|..+...+. +.+.+.+.-.+++++||...
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~ 140 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG 140 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 999999986421 123444444443 33333321258998887653
No 259
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.49 E-value=2.7e-13 Score=88.45 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=86.7
Q ss_pred CceEEEEcc-CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 3 KSKVLVVGG-TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 3 ~~~ili~Ga-~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.++++|||. .|+||.++++++.++|+.|++..|+.+..+ .+. .+.++.....|+++++++.++..
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~-----~L~--~~~gl~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMA-----QLA--IQFGLKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHh-----hHH--HhhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence 467899985 599999999999999999999999873322 221 14568899999999998887643
Q ss_pred -ccCEEEEeCccc--------------cceecchHHHHHHHHHHHHh--CCccEEEEecCCcccccC
Q 033236 75 -RVDVVICTISGV--------------HFRSHNILMQLKLVDAIREA--GNVKKRKLNEGMIPFFLF 124 (124)
Q Consensus 75 -~~d~vi~~a~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~ss~~~~~~~ 124 (124)
++|+++||||.. ..+.+|+.|..++.+++.+. +....|+++.|...+..|
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf 146 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF 146 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc
Confidence 289999999843 23678888887777777542 112589999988876554
No 260
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.49 E-value=4.5e-13 Score=107.78 Aligned_cols=116 Identities=17% Similarity=0.267 Sum_probs=89.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhhh----------hccCCeEEEEcccCC---
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLLS----------FKKQGAHLIEASFAD--- 65 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~--- 65 (124)
.++++|||++|++|.++++.|++.+ ++|+++.|+....+. .+.... ....+++++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~--~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG--LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH--HHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence 3689999999999999999999876 899999997633211 111110 012368899999974
Q ss_pred ---hHHHHHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 66 ---HRSLVEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 66 ---~~~~~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.+.+..+.+++|+|||+|+..+. ...|+.++.++++++.+.+ +++++|+||...|
T Consensus 1049 gl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443 1049 GLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSAL 1113 (1389)
T ss_pred CcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeec
Confidence 46677788889999999987653 2468999999999999887 7899999987654
No 261
>PLN00015 protochlorophyllide reductase
Probab=99.49 E-value=5.8e-13 Score=92.39 Aligned_cols=110 Identities=16% Similarity=0.169 Sum_probs=79.4
Q ss_pred EEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhc-------cc
Q 033236 7 LVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVK-------RV 76 (124)
Q Consensus 7 li~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~ 76 (124)
+||||+++||.++++.|+++| ++|++.+|+.. ...+....+. ...+.++.+|++|.++++++++ ++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFL----KAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHH----HHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 589999999999999999999 99999998762 2112222221 2457788999999999888765 37
Q ss_pred CEEEEeCcccc---------------ceecchHHHHHHHHHHHHh----CC-ccEEEEecCCcc
Q 033236 77 DVVICTISGVH---------------FRSHNILMQLKLVDAIREA----GN-VKKRKLNEGMIP 120 (124)
Q Consensus 77 d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~----~~-~~~~i~~ss~~~ 120 (124)
|++|||||... .++.|+.+...+++.+.+. +. ..++|++||...
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~ 140 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG 140 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Confidence 99999998531 1346777777776665442 20 258999987643
No 262
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.49 E-value=4.1e-13 Score=86.95 Aligned_cols=115 Identities=19% Similarity=0.216 Sum_probs=84.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.+.+++||||+++||..+++.+.+.|-+|++..|+. .+.+.... ..+.+....||+.|.++..++.+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e-----~~L~e~~~-~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNE-----ERLAEAKA-ENPEIHTEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH-----HHHHHHHh-cCcchheeeecccchhhHHHHHHHHHhhCC
Confidence 367899999999999999999999999999999997 33332222 34678899999999987777765
Q ss_pred ccCEEEEeCccccc----------------eecchHHHHHHHHHHHHhC---CccEEEEecCCcccc
Q 033236 75 RVDVVICTISGVHF----------------RSHNILMQLKLVDAIREAG---NVKKRKLNEGMIPFF 122 (124)
Q Consensus 75 ~~d~vi~~a~~~~~----------------~~~~~~~~~~~~~~~~~~~---~~~~~i~~ss~~~~~ 122 (124)
..+++|||||..+- ...|..+..++...+.++- +-..+|.+||...+.
T Consensus 78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv 144 (245)
T COG3967 78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV 144 (245)
T ss_pred chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC
Confidence 27999999995421 1245666666666665431 135788888876543
No 263
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.48 E-value=1.1e-12 Score=88.82 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=78.9
Q ss_pred CceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
+++++|||+ +++||.++++.|+++|++|++.+|+... ...+.........+.++++|++|+++++++++
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL---RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch---hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 478999999 8999999999999999999999876411 11111111112357789999999999888765
Q ss_pred -ccCEEEEeCcccc-------c-----------eecchHHHHHHHHHHHHhC-CccEEEEecC
Q 033236 75 -RVDVVICTISGVH-------F-----------RSHNILMQLKLVDAIREAG-NVKKRKLNEG 117 (124)
Q Consensus 75 -~~d~vi~~a~~~~-------~-----------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss 117 (124)
++|++|||||... + ++.|..+...+.+.+.+.- .-.+++++|+
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~ 146 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF 146 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence 3899999998541 1 2456677777777765431 1247777663
No 264
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.46 E-value=1.8e-12 Score=87.95 Aligned_cols=116 Identities=13% Similarity=0.015 Sum_probs=79.8
Q ss_pred CCCceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----
Q 033236 1 MGKSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---- 74 (124)
Q Consensus 1 m~~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---- 74 (124)
|++++++|||| +++||.++++.|+++|++|++..|.... ....+..... ......+++|++|+++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAE-FGSDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHHHHHHHh-cCCcceeeccCCCHHHHHHHHHHHHH
Confidence 45688999996 6899999999999999999888664211 1111211111 1223478999999999998875
Q ss_pred ---ccCEEEEeCcccc-------------------ceecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 75 ---RVDVVICTISGVH-------------------FRSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 75 ---~~d~vi~~a~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
++|++|||||... .++.|..+...+.+++.+.- .-.+++++||..
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~ 148 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG 148 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 3899999998531 02356677777777776531 125788888654
No 265
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.4e-12 Score=85.11 Aligned_cols=96 Identities=26% Similarity=0.373 Sum_probs=76.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~vi 80 (124)
|+++|||++|++|+++++.|.++ ++|++++|++. .+++|++|+++++++++ ++|++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999998 99999999761 46899999999999887 589999
Q ss_pred EeCccccc--------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 81 CTISGVHF--------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 81 ~~a~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
|++|.... ++.|..++.++++++.+.- ...+++++||..
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 99985321 2456778888888876531 125788888654
No 266
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.8e-12 Score=87.92 Aligned_cols=104 Identities=29% Similarity=0.429 Sum_probs=80.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+++|+||+|++|++++++|+++|++|.+..|++ +....+. ..+++..+|+.++.++..++++.+.++++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~--------~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~ 71 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNP--------EAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS 71 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCH--------HHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence 5799999999999999999999999999999998 3333333 789999999999999999999999999988
Q ss_pred cccc----ceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 84 SGVH----FRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 84 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
+... ..........+..+++. .+ +++++.+|..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~ 108 (275)
T COG0702 72 GLLDGSDAFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVL 108 (275)
T ss_pred cccccccchhHHHHHHHHHHHHHhc-CC-ceEEEEeccC
Confidence 7443 22233444444444443 33 5778877744
No 267
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.45 E-value=1.7e-12 Score=83.59 Aligned_cols=115 Identities=12% Similarity=0.047 Sum_probs=85.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
.+..+|||++++||+++++.|+++|++|.+.+++.... ++....+.. ...-..+.||++++++++..++.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-~ata~~L~g--~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-EATAGDLGG--YGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-HHHHhhcCC--CCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999887322 222222222 13456899999999999887653
Q ss_pred cCEEEEeCccccc--------------eecchHHHHHHHHHHHHh----C-CccEEEEecCCcc
Q 033236 76 VDVVICTISGVHF--------------RSHNILMQLKLVDAIREA----G-NVKKRKLNEGMIP 120 (124)
Q Consensus 76 ~d~vi~~a~~~~~--------------~~~~~~~~~~~~~~~~~~----~-~~~~~i~~ss~~~ 120 (124)
+++++||||..+. ...|..|+..+.+++.+. + ..-+||.+||...
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVG 154 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVG 154 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhc
Confidence 8999999997642 346788888888777654 1 1238999998753
No 268
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.44 E-value=7.2e-13 Score=100.26 Aligned_cols=88 Identities=24% Similarity=0.272 Sum_probs=69.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV 79 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 79 (124)
+.|+++||||+|++|+++++.|.++|++|.. ..+|++|.+.+.+.++ ++|+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~~pd~V 432 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNVKPTHV 432 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhhCCCEE
Confidence 4578999999999999999999999987631 1135778888888876 68999
Q ss_pred EEeCcccc-------------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 80 ICTISGVH-------------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 80 i~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
||+|+... .+..|+.++.+++++|.+.+ +++++++|
T Consensus 433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss 481 (668)
T PLN02260 433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFAT 481 (668)
T ss_pred EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcc
Confidence 99998542 13578999999999999998 66554434
No 269
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.44 E-value=1.5e-12 Score=88.00 Aligned_cols=117 Identities=19% Similarity=0.209 Sum_probs=89.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHH--HHHhhhhccCCeEEEEcccCChHHHHHHhcc--cC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDK--LQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VD 77 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d 77 (124)
|+|..+|||-+|.-|..+++.|+++||.|+.+.|..+...... .-......+.++.++.+|++|...+.++++. +|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 4578999999999999999999999999999988865433332 2233333455688999999999999999985 78
Q ss_pred EEEEeCcccc----------ceecchHHHHHHHHHHHHhCCc-cEEEEecCC
Q 033236 78 VVICTISGVH----------FRSHNILMQLKLVDAIREAGNV-KKRKLNEGM 118 (124)
Q Consensus 78 ~vi~~a~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~i~~ss~ 118 (124)
-|+|.++... ..+.+..|+.+++++++-.+.. .||...||+
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS 132 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS 132 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH
Confidence 9999987432 2356688999999999988731 344444443
No 270
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.43 E-value=1.6e-12 Score=86.59 Aligned_cols=103 Identities=20% Similarity=0.268 Sum_probs=72.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---ccCE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK---RVDV 78 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~ 78 (124)
|+++||||+|+||+++++.|+++| ..+....|+... .....++.++++|++++++++++.+ ++|+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~ 70 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDW 70 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 589999999999999999999985 556555665411 1123567899999999998877654 5899
Q ss_pred EEEeCccccc--------------------eecchHHHHHHHHHHHH----hCCccEEEEecC
Q 033236 79 VICTISGVHF--------------------RSHNILMQLKLVDAIRE----AGNVKKRKLNEG 117 (124)
Q Consensus 79 vi~~a~~~~~--------------------~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss 117 (124)
+|||+|.... ...|+.+...+++.+.+ .+ ..+++++||
T Consensus 71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss 132 (235)
T PRK09009 71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISA 132 (235)
T ss_pred EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEee
Confidence 9999986421 13455566556665544 33 357777764
No 271
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.42 E-value=7.6e-13 Score=89.11 Aligned_cols=102 Identities=25% Similarity=0.337 Sum_probs=70.4
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEEEeCc
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVICTIS 84 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~a~ 84 (124)
|+||||+|+||++++..|.+.|++|++++|+++.. ... ....+. .-+.+.+..+ ++|+|||.||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~----~~~----~~~~v~-------~~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA----SQN----LHPNVT-------LWEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch----hhh----cCcccc-------ccchhhhcccCCCCEEEECCC
Confidence 58999999999999999999999999999998221 111 111111 2233444444 7999999999
Q ss_pred ccc------------ceecchHHHHHHHHHHHHhCCccEEEEecCCcccc
Q 033236 85 GVH------------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPFF 122 (124)
Q Consensus 85 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~~ 122 (124)
..= ..+..+..+..+.+...+.....+..+++|...|+
T Consensus 66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyY 115 (297)
T COG1090 66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYY 115 (297)
T ss_pred CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEe
Confidence 531 12445788899999998765334455555766664
No 272
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.42 E-value=6.6e-12 Score=85.77 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=83.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
.+|.++|||++.+||++++.+|++.|.+|++.+|+++..++.......... ...+..+.+|++++++.+++++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999998433222222222111 3458899999999887777654
Q ss_pred --ccCEEEEeCcccc---------------ceecchHH-HHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 --RVDVVICTISGVH---------------FRSHNILM-QLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 --~~d~vi~~a~~~~---------------~~~~~~~~-~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
++|+++||||... ....|..| ...+.+++.+ .+ -..++++|+...
T Consensus 87 ~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~ 153 (270)
T KOG0725|consen 87 FGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAG 153 (270)
T ss_pred CCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEecccc
Confidence 3899999998542 13456674 4444444433 23 467888886643
No 273
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.40 E-value=1.1e-11 Score=83.36 Aligned_cols=118 Identities=18% Similarity=0.137 Sum_probs=82.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCC-chHHHHHhhhhcc-CCeEEEEcccCC-hHHHHHHhcc--
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGL-DIDKLQMLLSFKK-QGAHLIEASFAD-HRSLVEAVKR-- 75 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~-- 75 (124)
|++++++|||+++++|.++++.|++.|+.|++..|+.... .+....... ... ..+....+|+++ +++++.+++.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 3568899999999999999999999999998888876331 111111111 111 356788899998 8888777652
Q ss_pred -----cCEEEEeCcccc----c-----------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 76 -----VDVVICTISGVH----F-----------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 -----~d~vi~~a~~~~----~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
+|+++||||... . ++.|+.+...+.+.+.+....++++.+||..
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~ 145 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVA 145 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCch
Confidence 899999999642 1 2456777777777444432112888888765
No 274
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.38 E-value=5.2e-12 Score=83.01 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=85.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhh-hccCCeEEEEcccCChHHHHHHhcc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLS-FKKQGAHLIEASFADHRSLVEAVKR------ 75 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~------ 75 (124)
+|+++++|+.|+||..+.++|+++|..+.++..+.+. .+...++.. .++..+.++++|+++..++++++++
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En--~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN--PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC--HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 7899999999999999999999999888777665522 122222222 2355688999999999999999875
Q ss_pred -cCEEEEeCccccc------eecch----HHHHHHHHHHHHh--CCccEEEEecCCccc
Q 033236 76 -VDVVICTISGVHF------RSHNI----LMQLKLVDAIREA--GNVKKRKLNEGMIPF 121 (124)
Q Consensus 76 -~d~vi~~a~~~~~------~~~~~----~~~~~~~~~~~~~--~~~~~~i~~ss~~~~ 121 (124)
+|++||+||.... ...|. .++...++++.+. |+..-++.+||...+
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL 141 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL 141 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence 8999999997642 33453 4455566666553 234578888877643
No 275
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.4e-11 Score=79.36 Aligned_cols=99 Identities=19% Similarity=0.200 Sum_probs=73.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcc-------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKR------- 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~------- 75 (124)
|+++|+||+|++| .+++.|++.|++|++.+|++ ........... ...+.++.+|++|++++.+++++
T Consensus 1 m~vlVtGGtG~gg-~la~~L~~~G~~V~v~~R~~----~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~ 75 (177)
T PRK08309 1 MHALVIGGTGMLK-RVSLWLCEKGFHVSVIARRE----VKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGP 75 (177)
T ss_pred CEEEEECcCHHHH-HHHHHHHHCcCEEEEEECCH----HHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5799999997665 59999999999999999876 22111111121 34678899999999999998864
Q ss_pred cCEEEEeCccccceecchHHHHHHHHHHHHhCCcc----EEEEec
Q 033236 76 VDVVICTISGVHFRSHNILMQLKLVDAIREAGNVK----KRKLNE 116 (124)
Q Consensus 76 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~s 116 (124)
+|.+|+..- ..+..++.++|++.+ ++ +++++-
T Consensus 76 id~lv~~vh--------~~~~~~~~~~~~~~g-v~~~~~~~~h~~ 111 (177)
T PRK08309 76 FDLAVAWIH--------SSAKDALSVVCRELD-GSSETYRLFHVL 111 (177)
T ss_pred CeEEEEecc--------ccchhhHHHHHHHHc-cCCCCceEEEEe
Confidence 566665443 557889999999998 77 787665
No 276
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.37 E-value=1.5e-11 Score=80.73 Aligned_cols=100 Identities=20% Similarity=0.203 Sum_probs=73.1
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhC-CCeEEE-EeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc--
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQ-GHETYV-LQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK-- 74 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~-- 74 (124)
|..+.++||||+++||-.++++|++. |.++++ ..|+++. ..+.++.+ .++++.+++.|+++.++++++.+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~----a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEK----AATELALKSKSDSRVHIIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHH----hhHHHHHhhccCCceEEEEEecccHHHHHHHHHHH
Confidence 77889999999999999999999875 555544 4565622 23333332 37899999999999988888765
Q ss_pred -------ccCEEEEeCcccc---------------ceecchHHHHHHHHHHH
Q 033236 75 -------RVDVVICTISGVH---------------FRSHNILMQLKLVDAIR 104 (124)
Q Consensus 75 -------~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~ 104 (124)
++|.+|||||... .+++|..+...+.+++.
T Consensus 77 ~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l 128 (249)
T KOG1611|consen 77 EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL 128 (249)
T ss_pred HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence 3799999999542 25677666665555553
No 277
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=99.37 E-value=1.5e-11 Score=87.14 Aligned_cols=98 Identities=22% Similarity=0.313 Sum_probs=79.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+|+++|.|+ |++|+.++..|++++ .+|++.+|+. .+..+.......+++..+.|+.|.+.+.+++++.|+|||
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~-----~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn 74 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSK-----EKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN 74 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCH-----HHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence 478999997 999999999999998 9999999997 333333332345899999999999999999999999999
Q ss_pred eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++++.. ..+++++|.+.| + +++-+|
T Consensus 75 ~~p~~~--------~~~i~ka~i~~g-v-~yvDts 99 (389)
T COG1748 75 AAPPFV--------DLTILKACIKTG-V-DYVDTS 99 (389)
T ss_pred eCCchh--------hHHHHHHHHHhC-C-CEEEcc
Confidence 998532 347888888888 3 565555
No 278
>PRK06720 hypothetical protein; Provisional
Probab=99.37 E-value=5.6e-12 Score=80.65 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=62.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
+++.++||||++++|..+++.|++.|++|.+.+|+....+ ........ ......++.+|+++++++.++++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ-ATVEEITN-LGGEALFVSYDMEKQGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999998762211 11111111 13346688999999998888664
Q ss_pred ccCEEEEeCccc
Q 033236 75 RVDVVICTISGV 86 (124)
Q Consensus 75 ~~d~vi~~a~~~ 86 (124)
++|.+|||+|..
T Consensus 93 ~iDilVnnAG~~ 104 (169)
T PRK06720 93 RIDMLFQNAGLY 104 (169)
T ss_pred CCCEEEECCCcC
Confidence 489999999854
No 279
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.36 E-value=1.4e-11 Score=88.77 Aligned_cols=118 Identities=18% Similarity=0.275 Sum_probs=90.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHH-------HHhhhhc------cCCeEEEEcccCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKL-------QMLLSFK------KQGAHLIEASFAD 65 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~-------~~~~~~~------~~~~~~~~~D~~~ 65 (124)
.+++++||||+||+|+.+++.|++.. -+++++.|...+.+.+.. +..+.+. -.++..+.||+++
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 36899999999999999999998753 488888888755433322 1111111 1357788999986
Q ss_pred h------HHHHHHhcccCEEEEeCccccce-------ecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 66 H------RSLVEAVKRVDVVICTISGVHFR-------SHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 66 ~------~~~~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
+ ++++.+.+.+|+|+|+|+.+++. ..|..|++++++.|.+..+.+-++++|+..
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy 157 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAY 157 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhh
Confidence 5 56777788999999999987653 468999999999999987789999999654
No 280
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.33 E-value=1.2e-11 Score=84.70 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=85.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------c
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------V 76 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~ 76 (124)
.+++|||++.++|..++.++..+|++|+++.|+.....+.............+.+..+|+.|.+++.+++++ +
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 479999999999999999999999999999999733222222211111122366888999999999999875 6
Q ss_pred CEEEEeCccc--------------cceecchHHHHHHHHHHHHhCC-c---cEEEEecCCc
Q 033236 77 DVVICTISGV--------------HFRSHNILMQLKLVDAIREAGN-V---KKRKLNEGMI 119 (124)
Q Consensus 77 d~vi~~a~~~--------------~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~~ss~~ 119 (124)
|.+++|||.. ...+.|..++.+++++.....+ . .+|+++||..
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~ 174 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL 174 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence 9999999843 1135788999999988876431 2 2788777544
No 281
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.33 E-value=3.2e-11 Score=82.61 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=85.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhc-------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVK------- 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~------- 74 (124)
.+.|+|||..++.|..++++|.++|+.|.+-+-.+++. +.+.... +++...++.|++++++++++.+
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga-----e~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA-----ESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG 103 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH-----HHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence 46699999999999999999999999999988665332 2222222 6788899999999999999875
Q ss_pred --ccCEEEEeCcccc---------------ceecchHHHHHHHHHHHHhC--CccEEEEecCCc
Q 033236 75 --RVDVVICTISGVH---------------FRSHNILMQLKLVDAIREAG--NVKKRKLNEGMI 119 (124)
Q Consensus 75 --~~d~vi~~a~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ss~~ 119 (124)
+...||||||... ..++|..|+.++.++..+.= .-.|+|++||..
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~ 167 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL 167 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc
Confidence 3789999998442 13578888877777765420 126999999765
No 282
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.32 E-value=3.1e-11 Score=76.80 Aligned_cols=108 Identities=22% Similarity=0.337 Sum_probs=89.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
|++|..+|.||+|-+|+.+++++.+.+ .+|+++.|.... + +.....+.....|.+.-+++...+.+.|+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d--------~at~k~v~q~~vDf~Kl~~~a~~~qg~dV 86 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-D--------PATDKVVAQVEVDFSKLSQLATNEQGPDV 86 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-C--------ccccceeeeEEechHHHHHHHhhhcCCce
Confidence 678899999999999999999999987 699998887411 1 11234567788999999999999999999
Q ss_pred EEEeCccc-------cceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 79 VICTISGV-------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 79 vi~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
.+++.|.+ .++.++.......++++++.| +++|+++||.
T Consensus 87 ~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~ 132 (238)
T KOG4039|consen 87 LFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSA 132 (238)
T ss_pred EEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEecc
Confidence 99997755 357788888999999999999 8999999865
No 283
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.32 E-value=2.9e-11 Score=83.87 Aligned_cols=118 Identities=13% Similarity=0.067 Sum_probs=76.4
Q ss_pred CCCceEEEEcc--CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHh-------hhhcc----CCeEEEEccc--CC
Q 033236 1 MGKSKVLVVGG--TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQML-------LSFKK----QGAHLIEASF--AD 65 (124)
Q Consensus 1 m~~~~ili~Ga--~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~----~~~~~~~~D~--~~ 65 (124)
|++|+++|||| +++||.++++.|++.|++|++ .|+....+....... ..... .....+.+|+ ++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 45789999999 799999999999999999988 665422211111110 00011 1145788888 33
Q ss_pred h------------------HHHHHHhc-------ccCEEEEeCcccc----------------ceecchHHHHHHHHHHH
Q 033236 66 H------------------RSLVEAVK-------RVDVVICTISGVH----------------FRSHNILMQLKLVDAIR 104 (124)
Q Consensus 66 ~------------------~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~~~~~~~~~~~ 104 (124)
+ +++.++++ ++|++|||||... .++.|+.+...+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3 36666654 3899999996311 13567888888887776
Q ss_pred HhC-CccEEEEecCCc
Q 033236 105 EAG-NVKKRKLNEGMI 119 (124)
Q Consensus 105 ~~~-~~~~~i~~ss~~ 119 (124)
+.- .-.++|++||..
T Consensus 166 p~m~~~G~II~isS~a 181 (303)
T PLN02730 166 PIMNPGGASISLTYIA 181 (303)
T ss_pred HHHhcCCEEEEEechh
Confidence 641 015899888654
No 284
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.29 E-value=3.7e-11 Score=100.47 Aligned_cols=118 Identities=18% Similarity=0.160 Sum_probs=88.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCC---------ch------------------------------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGL---------DI------------------------------ 42 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~---------~~------------------------------ 42 (124)
+++++||||+++||..++++|+++ |++|++++|++... +.
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence 568999999999999999999988 69999999983100 00
Q ss_pred ----HHHHHhhhh--ccCCeEEEEcccCChHHHHHHhc------ccCEEEEeCcccc--------------ceecchHHH
Q 033236 43 ----DKLQMLLSF--KKQGAHLIEASFADHRSLVEAVK------RVDVVICTISGVH--------------FRSHNILMQ 96 (124)
Q Consensus 43 ----~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~~~~--------------~~~~~~~~~ 96 (124)
+....+..+ ....+.++.+|++|.+++.++++ ++|.|||+||... .++.|+.|.
T Consensus 2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813 2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 000111111 12457889999999999988876 3899999999542 246789999
Q ss_pred HHHHHHHHHhCCccEEEEecCCccc
Q 033236 97 LKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 97 ~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
.++++++.... .++++++||...+
T Consensus 2157 ~~Ll~al~~~~-~~~IV~~SSvag~ 2180 (2582)
T TIGR02813 2157 LSLLAALNAEN-IKLLALFSSAAGF 2180 (2582)
T ss_pred HHHHHHHHHhC-CCeEEEEechhhc
Confidence 99999998776 6789988887644
No 285
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.3e-11 Score=83.55 Aligned_cols=117 Identities=21% Similarity=0.302 Sum_probs=91.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~ 78 (124)
.++++|||++|+||++.+..+.+.- ++.+.++.-.--.. .....+....++..++++|+.+...+..++. .+|.
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 3679999999999999999999863 67777665431111 1122222246789999999999999999886 5999
Q ss_pred EEEeCccc----------cceecchHHHHHHHHHHHHhCCccEEEEecCCccc
Q 033236 79 VICTISGV----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 79 vi~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~~ 121 (124)
|+|.|+.. .+.+.|+.++..+++++..+|++++++++|+.-+|
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVY 136 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVY 136 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccccee
Confidence 99998744 23568899999999999999779999999987766
No 286
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.27 E-value=7.1e-11 Score=84.06 Aligned_cols=113 Identities=33% Similarity=0.359 Sum_probs=81.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhh-hhccCCeEEEEcccCCh-HHHHHHhcc----
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLL-SFKKQGAHLIEASFADH-RSLVEAVKR---- 75 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~-~~~~~~~~~---- 75 (124)
+.++|+|+||+|.+|+.+++.|+++|+.|.++.|+. +...+... ...+.....+..|...+ +.+.++.+.
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~----~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDE----QKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccCh----hhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 346899999999999999999999999999999997 33333332 22344556666665544 444555543
Q ss_pred cCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 76 VDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
..+++-+++...- ..++..|++|++++|...| ++|++++++..
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~ 203 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIG 203 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeec
Confidence 3356666653322 2477899999999999999 99999997543
No 287
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=99.25 E-value=2.2e-10 Score=81.84 Aligned_cols=95 Identities=23% Similarity=0.277 Sum_probs=69.8
Q ss_pred EEEEccCChhcHHHHHHHhhCC-C-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 6 VLVVGGTGYIGRRIVKASLAQG-H-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+|.|+ |.+|+.+++.|++.+ . +|++.+|+. ....+....+...+++.+++|+.|++++.+++++.|+||||+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~----~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP----EKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCA 75 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH----HHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH----HHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence 689999 999999999999987 4 899999997 232333333356789999999999999999999999999999
Q ss_pred ccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236 84 SGVHFRSHNILMQLKLVDAIREAGNVKKRKLN 115 (124)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (124)
|+. ....++++|.+.| .+++-.
T Consensus 76 gp~--------~~~~v~~~~i~~g--~~yvD~ 97 (386)
T PF03435_consen 76 GPF--------FGEPVARACIEAG--VHYVDT 97 (386)
T ss_dssp SGG--------GHHHHHHHHHHHT---EEEES
T ss_pred ccc--------hhHHHHHHHHHhC--CCeecc
Confidence 964 2446777887777 355543
No 288
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.25 E-value=7.8e-11 Score=74.90 Aligned_cols=112 Identities=14% Similarity=0.098 Sum_probs=85.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc---cCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR---VDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~d~v 79 (124)
++.+++||+.-+||+.+++.|+..|.+|+++.|++ +....+-.....-++-+++|+++.+.+.+++-. +|.+
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~-----a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE-----ANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCCEEEEEecCH-----HHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 57899999999999999999999999999999998 333333333344488999999999988888764 7999
Q ss_pred EEeCccc--------------cceecchHHHHHHHHHHHH----hCCccEEEEecCCc
Q 033236 80 ICTISGV--------------HFRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMI 119 (124)
Q Consensus 80 i~~a~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~ 119 (124)
+||||.. +.+++|+++..++.+...+ ......++.+||-.
T Consensus 82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqa 139 (245)
T KOG1207|consen 82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQA 139 (245)
T ss_pred hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchh
Confidence 9999842 3467888888777777433 33234677777644
No 289
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.22 E-value=2.2e-10 Score=78.39 Aligned_cols=115 Identities=17% Similarity=0.170 Sum_probs=78.4
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH----HHHHhcc--cCE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS----LVEAVKR--VDV 78 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~----~~~~~~~--~d~ 78 (124)
=.+||||+.+||++.+++|+++|.+|++++|+++.++..+.+..+. .+-.+.++..|.++.+. +.+.+++ +.+
T Consensus 51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~-~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK-YKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred EEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH-hCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 3689999999999999999999999999999984443333333322 22446788999988764 4444554 558
Q ss_pred EEEeCcccc----------------ceecchHHHHHHHHHH----HHhCCccEEEEecCCccc
Q 033236 79 VICTISGVH----------------FRSHNILMQLKLVDAI----REAGNVKKRKLNEGMIPF 121 (124)
Q Consensus 79 vi~~a~~~~----------------~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ss~~~~ 121 (124)
+|||+|... ....|..++..+.+.. .+.+ ...++.++|....
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~ 191 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGL 191 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEecccccc
Confidence 999998442 1235555554444444 4444 4678888876643
No 290
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.19 E-value=2.5e-10 Score=76.47 Aligned_cols=119 Identities=14% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCC-C----eEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHHh
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQG-H----ETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEAV 73 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~----~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~ 73 (124)
|++|.++|||+++++|-+++..|++.. . .+.+.+|+-+..+..-....+..++ -+++++..|+++-.++.++.
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~ 80 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS 80 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence 778889999999999999999998754 3 3344567763332222222222232 35779999999998877775
Q ss_pred c-------ccCEEEEeCcccc-----------------------------------------ceecchHHHHHHHHHHHH
Q 033236 74 K-------RVDVVICTISGVH-----------------------------------------FRSHNILMQLKLVDAIRE 105 (124)
Q Consensus 74 ~-------~~d~vi~~a~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~ 105 (124)
+ ..|.++.|||... .++.|+.|...+++.+++
T Consensus 81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p 160 (341)
T KOG1478|consen 81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP 160 (341)
T ss_pred HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence 4 4899999998431 246788888888877766
Q ss_pred hC---CccEEEEecCCc
Q 033236 106 AG---NVKKRKLNEGMI 119 (124)
Q Consensus 106 ~~---~~~~~i~~ss~~ 119 (124)
.- ....+|++||..
T Consensus 161 ll~~~~~~~lvwtSS~~ 177 (341)
T KOG1478|consen 161 LLCHSDNPQLVWTSSRM 177 (341)
T ss_pred HhhcCCCCeEEEEeecc
Confidence 32 124788888654
No 291
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=99.16 E-value=2.3e-10 Score=79.61 Aligned_cols=93 Identities=24% Similarity=0.368 Sum_probs=70.2
Q ss_pred eEEEEccCChhcHHHHHHHhh----CCCeEEEEeCCCCCCchHHHHHhhhhc--c----CCeEEEEcccCChHHHHHHhc
Q 033236 5 KVLVVGGTGYIGRRIVKASLA----QGHETYVLQRPDIGLDIDKLQMLLSFK--K----QGAHLIEASFADHRSLVEAVK 74 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~--~----~~~~~~~~D~~~~~~~~~~~~ 74 (124)
.++|.||+|++|..+++++.+ .+..+-+..|++ ....+.++... . +...++.+|.+|++++.+..+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~----~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE----KKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH----HHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh
Confidence 589999999999999999998 677888888997 22222222221 1 123388999999999999999
Q ss_pred ccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236 75 RVDVVICTISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 75 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
++.+|+||+||.+++. ..++++|.++|
T Consensus 83 ~~~vivN~vGPyR~hG------E~VVkacienG 109 (423)
T KOG2733|consen 83 QARVIVNCVGPYRFHG------EPVVKACIENG 109 (423)
T ss_pred hhEEEEeccccceecC------cHHHHHHHHcC
Confidence 9999999999887643 34555666665
No 292
>PTZ00325 malate dehydrogenase; Provisional
Probab=99.14 E-value=6.6e-10 Score=77.56 Aligned_cols=109 Identities=17% Similarity=0.051 Sum_probs=79.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
++++.|+|++|.+|..++..|...+ .++.+++++. ......+... ........+.+|+++..+.++++|+||
T Consensus 8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~----~~~~~~v~~~td~~~~~~~l~gaDvVV 81 (321)
T PTZ00325 8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSH----IDTPAKVTGYADGELWEKALRGADLVL 81 (321)
T ss_pred CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchhh----cCcCceEEEecCCCchHHHhCCCCEEE
Confidence 5689999999999999999998665 6899999832 1111222211 111233455667666678999999999
Q ss_pred EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
+++|.... ...|...++++++++.+++ ++++++++|-
T Consensus 82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SN 126 (321)
T PTZ00325 82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSN 126 (321)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence 99986432 4568889999999999999 8899888753
No 293
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.08 E-value=9.8e-10 Score=73.65 Aligned_cols=106 Identities=19% Similarity=0.209 Sum_probs=73.2
Q ss_pred ccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChHHHHHHhc--------ccCE
Q 033236 10 GGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHRSLVEAVK--------RVDV 78 (124)
Q Consensus 10 Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~--------~~d~ 78 (124)
|++ ++||.++++.|+++|++|++++|++ +...+..+.+ ...+.+++++|++++++++++++ ++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~----~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNE----EKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSH----HHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 566 9999999999999999999999998 2211222222 12234579999999998888854 4799
Q ss_pred EEEeCccccc------------------eecchHHHHHHHHHHHHhC-CccEEEEecCCc
Q 033236 79 VICTISGVHF------------------RSHNILMQLKLVDAIREAG-NVKKRKLNEGMI 119 (124)
Q Consensus 79 vi~~a~~~~~------------------~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~ 119 (124)
+|||++.... ++.|..+...+++++.+.- .-.++|++||..
T Consensus 77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~ 136 (241)
T PF13561_consen 77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA 136 (241)
T ss_dssp EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG
T ss_pred EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh
Confidence 9999874421 2345666666776664421 025788887654
No 294
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.04 E-value=1e-09 Score=76.13 Aligned_cols=35 Identities=20% Similarity=0.072 Sum_probs=31.0
Q ss_pred CCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCC
Q 033236 2 GKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRP 36 (124)
Q Consensus 2 ~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~ 36 (124)
++|+++|||++ .+||+++++.|+++|++|++.++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 46789999995 899999999999999999997654
No 295
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.01 E-value=4.6e-09 Score=68.50 Aligned_cols=79 Identities=22% Similarity=0.267 Sum_probs=60.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
++++++|+|++|.+|+.+++.|++.|++|+++.|+. +......+.+. ..+.....+|..+.+++.++++++|+||
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL----ERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH----HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 457899999999999999999999999999999986 22222222221 1245566788889999999999999988
Q ss_pred EeCc
Q 033236 81 CTIS 84 (124)
Q Consensus 81 ~~a~ 84 (124)
++.+
T Consensus 103 ~at~ 106 (194)
T cd01078 103 AAGA 106 (194)
T ss_pred ECCC
Confidence 8664
No 296
>PLN00106 malate dehydrogenase
Probab=98.96 E-value=7.6e-09 Score=72.37 Aligned_cols=108 Identities=17% Similarity=0.057 Sum_probs=77.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
..||.|+|++|.+|..++..|...+ .++.++++++ +.....+.. +........++++.+++.+.++++|+||
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~----~~~~~~~i~~~~~~~d~~~~l~~aDiVV 91 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVS----HINTPAQVRGFLGDDQLGDALKGADLVI 91 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhh----hCCcCceEEEEeCCCCHHHHcCCCCEEE
Confidence 3589999999999999999998766 5899999876 211122221 1111223335455666888999999999
Q ss_pred EeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
++||.... ...|...++++.+.+.+.+ .+++++++|
T Consensus 92 itAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvS 135 (323)
T PLN00106 92 IPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIIS 135 (323)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeC
Confidence 99985422 3468889999999999998 677776663
No 297
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.96 E-value=7.3e-09 Score=73.62 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=59.0
Q ss_pred CceEEEEccCChhcHH--HHHHHhhCCCeEEEEeCCCCCCc----------h-HHHHHhhhhccCCeEEEEcccCChHHH
Q 033236 3 KSKVLVVGGTGYIGRR--IVKASLAQGHETYVLQRPDIGLD----------I-DKLQMLLSFKKQGAHLIEASFADHRSL 69 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~--l~~~l~~~g~~v~~~~r~~~~~~----------~-~~~~~~~~~~~~~~~~~~~D~~~~~~~ 69 (124)
+|+++|||+++++|.+ +++.| +.|++++++++...... . ...+.... ....+..+.+|+++++++
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~-~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA-AGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence 4789999999999999 89999 99999888875431111 0 11112211 123466889999999988
Q ss_pred HHHhc-------ccCEEEEeCccc
Q 033236 70 VEAVK-------RVDVVICTISGV 86 (124)
Q Consensus 70 ~~~~~-------~~d~vi~~a~~~ 86 (124)
+++++ ++|++||+++..
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccC
Confidence 88875 389999998743
No 298
>PRK09620 hypothetical protein; Provisional
Probab=98.95 E-value=3.7e-09 Score=70.69 Aligned_cols=83 Identities=23% Similarity=0.303 Sum_probs=58.1
Q ss_pred CCCceEEEEccC----------------ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236 1 MGKSKVLVVGGT----------------GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64 (124)
Q Consensus 1 m~~~~ili~Ga~----------------g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 64 (124)
|.+++++||+|. |++|.+++++|+++|++|+++++..+... .... .......+.+|..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~----~~~~--~~~~~~~V~s~~d 74 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP----NDIN--NQLELHPFEGIID 74 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC----cccC--CceeEEEEecHHH
Confidence 678999999886 99999999999999999999886532110 0000 0122344566444
Q ss_pred ChHHHHHHhc--ccCEEEEeCccccce
Q 033236 65 DHRSLVEAVK--RVDVVICTISGVHFR 89 (124)
Q Consensus 65 ~~~~~~~~~~--~~d~vi~~a~~~~~~ 89 (124)
..+.+.++++ ++|+|||+|+..+|.
T Consensus 75 ~~~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 75 LQDKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHHHHHhcccCCCEEEECcccccee
Confidence 4467788885 589999999876543
No 299
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.94 E-value=9.5e-09 Score=68.78 Aligned_cols=73 Identities=25% Similarity=0.308 Sum_probs=50.8
Q ss_pred EEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCC--hHHHHHHhcccCEEEEeC
Q 033236 7 LVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFAD--HRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 7 li~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~d~vi~~a 83 (124)
.|++ ++|++|.++++.|+++|++|++++|+... ......++.++.++..+ .+.+.+.++++|+|||+|
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~---------~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~A 89 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV---------KPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSM 89 (229)
T ss_pred eecCccchHHHHHHHHHHHhCCCEEEEEECcccc---------cCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCC
Confidence 3443 57899999999999999999999876410 01112356666654332 245666777899999999
Q ss_pred ccccc
Q 033236 84 SGVHF 88 (124)
Q Consensus 84 ~~~~~ 88 (124)
+...+
T Consensus 90 Avsd~ 94 (229)
T PRK06732 90 AVSDY 94 (229)
T ss_pred ccCCc
Confidence 97653
No 300
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.93 E-value=2.6e-09 Score=67.98 Aligned_cols=95 Identities=15% Similarity=0.177 Sum_probs=72.9
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc-------cC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR-------VD 77 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------~d 77 (124)
..+|||+.+++|++.++.|+++|..+.+++-.++.-. +..++ -..++.+..+|+++++++..++.. .|
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg~----~vake-lg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA----DVAKE-LGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch----HHHHH-hCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 4689999999999999999999999999988764332 11111 246788999999999999988753 79
Q ss_pred EEEEeCcccc--------------------ceecchHHHHHHHHHHH
Q 033236 78 VVICTISGVH--------------------FRSHNILMQLKLVDAIR 104 (124)
Q Consensus 78 ~vi~~a~~~~--------------------~~~~~~~~~~~~~~~~~ 104 (124)
+.+||+|..- ..++|+.|+.|+++...
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 9999998431 13567778877776553
No 301
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.91 E-value=2.2e-08 Score=68.00 Aligned_cols=90 Identities=24% Similarity=0.292 Sum_probs=64.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 81 (124)
|+++|+||||. |+.+++.|.+.|++|++..+++.+. +.+...+...+..+..+.+++.+++. ++|+||+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~--------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID 71 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK--------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD 71 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc--------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence 57999999999 9999999999999999999987321 11122333345566678888988886 4999999
Q ss_pred eCccccceecchHHHHHHHHHHHHhC
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
.+.|+. ..-+.++.++|.+.+
T Consensus 72 AtHPfA-----~~is~~a~~a~~~~~ 92 (256)
T TIGR00715 72 ATHPFA-----AQITTNATAVCKELG 92 (256)
T ss_pred cCCHHH-----HHHHHHHHHHHHHhC
Confidence 887653 233445555555554
No 302
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.86 E-value=3.8e-08 Score=69.06 Aligned_cols=109 Identities=19% Similarity=0.108 Sum_probs=70.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-------CeEEEEeCCCCC--CchHHHHHhhhhccCCeEEEEcccCChHHHHHHh
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-------HETYVLQRPDIG--LDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAV 73 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (124)
..+++|+||+|++|++++..|+..+ .+++++++++.. ......+. .+. ......|+....++.+.+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl----~d~-~~~~~~~~~~~~~~~~~l 76 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMEL----QDC-AFPLLKSVVATTDPEEAF 76 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeeh----hhc-cccccCCceecCCHHHHh
Confidence 4579999999999999999998744 589999987521 11000010 010 001123555456778888
Q ss_pred cccCEEEEeCccccc--------eecchHHHHHHHHHHHHhC-CccEEEEec
Q 033236 74 KRVDVVICTISGVHF--------RSHNILMQLKLVDAIREAG-NVKKRKLNE 116 (124)
Q Consensus 74 ~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~i~~s 116 (124)
+++|+|||+||.... ...|..-...+.+.+.+.. +-..++.+|
T Consensus 77 ~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (325)
T cd01336 77 KDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG 128 (325)
T ss_pred CCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 999999999986432 3456666777878887774 222344444
No 303
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.85 E-value=4.5e-08 Score=65.71 Aligned_cols=104 Identities=21% Similarity=0.263 Sum_probs=83.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeEEEEcccCChHHHHHHhcc--cC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAHLIEASFADHRSLVEAVKR--VD 77 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~--~d 77 (124)
|..+|||-+|.=|+.+++.|+.+||+|..+.|..+....++..++-..+ .......-+|++|.+.+.++++. .+
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 4579999999999999999999999999999988776666666554432 23467889999999999999874 67
Q ss_pred EEEEeCccccc----------eecchHHHHHHHHHHHHhC
Q 033236 78 VVICTISGVHF----------RSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 78 ~vi~~a~~~~~----------~~~~~~~~~~~~~~~~~~~ 107 (124)
-|+|.|+..+. -+++..|+.+++++....+
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~ 148 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR 148 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC
Confidence 78888764321 2466789999999998876
No 304
>PRK05086 malate dehydrogenase; Provisional
Probab=98.84 E-value=3.2e-08 Score=69.06 Aligned_cols=107 Identities=18% Similarity=0.111 Sum_probs=71.3
Q ss_pred ceEEEEccCChhcHHHHHHHhh-C--CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLA-Q--GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~-~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
|+++|+||+|.+|++++..+.. . ++++.+++|++. ......+.. ..+....+.+ .+.+++.+.++++|+||
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~---~~~~~~~i~~--~~~~d~~~~l~~~DiVI 74 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLS---HIPTAVKIKG--FSGEDPTPALEGADVVL 74 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccceehhhh---cCCCCceEEE--eCCCCHHHHcCCCCEEE
Confidence 6899999999999999988854 2 468888888752 111111211 1121122333 22445566778899999
Q ss_pred EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
.++|..+ ....|.....++++++.+.+ .++++.+.|
T Consensus 75 itaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvs 118 (312)
T PRK05086 75 ISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIIT 118 (312)
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcc
Confidence 9998543 23457788999999999998 677776653
No 305
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.82 E-value=1.3e-07 Score=63.20 Aligned_cols=72 Identities=22% Similarity=0.498 Sum_probs=60.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHH-hcccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEA-VKRVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~-~~~~d~vi 80 (124)
|+++|.|+ |.+|..+++.|.+.|++|+++++++ +...... ......+.+|.++++.+.++ ++++|+++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~--------~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vv 71 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDE--------ERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVV 71 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCH--------HHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEE
Confidence 57889985 9999999999999999999999998 3322322 25678999999999999999 78899999
Q ss_pred EeCc
Q 033236 81 CTIS 84 (124)
Q Consensus 81 ~~a~ 84 (124)
-..+
T Consensus 72 a~t~ 75 (225)
T COG0569 72 AATG 75 (225)
T ss_pred EeeC
Confidence 8887
No 306
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.81 E-value=2.1e-08 Score=67.31 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=69.1
Q ss_pred HHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCEEEEeCcccc------c
Q 033236 19 IVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDVVICTISGVH------F 88 (124)
Q Consensus 19 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~vi~~a~~~~------~ 88 (124)
+++.|+++|++|++++|+++.. . ..+++++|++|.+++.++++ ++|++|||||... .
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~-----~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~ 67 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGM-----T--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV 67 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchh-----h--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence 4678999999999999987221 1 12468999999999999887 4899999998542 3
Q ss_pred eecchHHHHHHHHHHHHhC-CccEEEEecCCccc
Q 033236 89 RSHNILMQLKLVDAIREAG-NVKKRKLNEGMIPF 121 (124)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~ss~~~~ 121 (124)
++.|+.++..+++.+.+.- .-.++|++||...+
T Consensus 68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~ 101 (241)
T PRK12428 68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGA 101 (241)
T ss_pred hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence 5788999999999987641 12589999976543
No 307
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=2e-08 Score=69.59 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=60.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
..++|.||+||.|..++++|.++|.+-.+-.|++ .+.+.+.....+. +-..++-+++.+....++.++|+||+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~-----~kl~~l~~~LG~~--~~~~p~~~p~~~~~~~~~~~VVlncv 79 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS-----AKLDALRASLGPE--AAVFPLGVPAALEAMASRTQVVLNCV 79 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCH-----HHHHHHHHhcCcc--ccccCCCCHHHHHHHHhcceEEEecc
Confidence 4689999999999999999999998887778987 4444443323333 44444445999999999999999999
Q ss_pred cccc
Q 033236 84 SGVH 87 (124)
Q Consensus 84 ~~~~ 87 (124)
||..
T Consensus 80 GPyt 83 (382)
T COG3268 80 GPYT 83 (382)
T ss_pred cccc
Confidence 9764
No 308
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.80 E-value=3.3e-08 Score=68.31 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=58.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
++++++|+|+ |++|++++..|++.|++ |+++.|++...+. ..+..+.+. ...+.+..+|+.+.+++.+.++.+|+
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~-a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYER-AEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHH-HHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 3578999998 89999999999999975 9999998621111 111222222 12345667899888888888889999
Q ss_pred EEEeCc
Q 033236 79 VICTIS 84 (124)
Q Consensus 79 vi~~a~ 84 (124)
+||+.+
T Consensus 203 lINaTp 208 (289)
T PRK12548 203 LVNATL 208 (289)
T ss_pred EEEeCC
Confidence 999875
No 309
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.78 E-value=3.7e-08 Score=70.77 Aligned_cols=75 Identities=17% Similarity=0.378 Sum_probs=58.3
Q ss_pred CCCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236 1 MGKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64 (124)
Q Consensus 1 m~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 64 (124)
|.+++++|||| +|.+|.+++++|.++|++|++++++.+. + ...+ +...|++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~------~-----~~~~--~~~~dv~ 252 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL------P-----TPAG--VKRIDVE 252 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc------c-----CCCC--cEEEccC
Confidence 45789999999 7889999999999999999999887510 0 0112 3467999
Q ss_pred ChHHHHHHhc----ccCEEEEeCccccc
Q 033236 65 DHRSLVEAVK----RVDVVICTISGVHF 88 (124)
Q Consensus 65 ~~~~~~~~~~----~~d~vi~~a~~~~~ 88 (124)
+.+++.++++ ++|++||+||..++
T Consensus 253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 253 SAQEMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred CHHHHHHHHHHhcCCCCEEEEccccccc
Confidence 9888877764 58999999986543
No 310
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=98.70 E-value=1e-06 Score=52.67 Aligned_cols=92 Identities=22% Similarity=0.305 Sum_probs=66.9
Q ss_pred EEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEeCc
Q 033236 6 VLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICTIS 84 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~ 84 (124)
++|.|. |.+|+.+++.|.+.+++|+++++++ +..+.....++.++.+|.++++.++++ +++++.++.+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~--------~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP--------ERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSH--------HHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc--------HHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 578885 8999999999999778999999997 333344456688999999999999998 678998888776
Q ss_pred cccceecchHHHHHHHHHHHHhCCccEEE
Q 033236 85 GVHFRSHNILMQLKLVDAIREAGNVKKRK 113 (124)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 113 (124)
+-.....++..+++.++..+++
T Consensus 72 -------~d~~n~~~~~~~r~~~~~~~ii 93 (116)
T PF02254_consen 72 -------DDEENLLIALLARELNPDIRII 93 (116)
T ss_dssp -------SHHHHHHHHHHHHHHTTTSEEE
T ss_pred -------CHHHHHHHHHHHHHHCCCCeEE
Confidence 2233445556666544223444
No 311
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=3.9e-08 Score=65.18 Aligned_cols=92 Identities=28% Similarity=0.361 Sum_probs=69.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcc--cCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKR--VDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~d~ 78 (124)
+++|+|+|++|-+|+++.+.+.+.|. +=.++. ..-.+|+++.++.+++|+. ..+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~----------------------~skd~DLt~~a~t~~lF~~ekPth 58 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI----------------------GSKDADLTNLADTRALFESEKPTH 58 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe----------------------ccccccccchHHHHHHHhccCCce
Confidence 37899999999999999999887764 111111 1225799999999999974 789
Q ss_pred EEEeCccc-----------cceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 79 VICTISGV-----------HFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 79 vi~~a~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
|||.|+-+ .+...|..-.-|++..+.+.| +++++++-|
T Consensus 59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclS 107 (315)
T KOG1431|consen 59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLS 107 (315)
T ss_pred eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcc
Confidence 99988632 345677777889999999999 777776553
No 312
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.60 E-value=2.8e-07 Score=65.92 Aligned_cols=97 Identities=20% Similarity=0.278 Sum_probs=62.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi 80 (124)
++++.|.||+|++|+.+++.|.++ ..++..+.+.++.. +.. ..........|..+.++++.. ++++|+||
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-----~~i---~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf 109 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-----QSF---GSVFPHLITQDLPNLVAVKDADFSDVDAVF 109 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-----CCc---hhhCccccCccccceecCCHHHhcCCCEEE
Confidence 468999999999999999999988 57998888764211 110 111111222343333333322 57899999
Q ss_pred EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
.+.+. ....++++.+ +.+ .++|-.|+.
T Consensus 110 ~Alp~--------~~s~~i~~~~-~~g--~~VIDlSs~ 136 (381)
T PLN02968 110 CCLPH--------GTTQEIIKAL-PKD--LKIVDLSAD 136 (381)
T ss_pred EcCCH--------HHHHHHHHHH-hCC--CEEEEcCch
Confidence 98872 3567777776 455 578877754
No 313
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.60 E-value=8.5e-07 Score=58.86 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=62.6
Q ss_pred CCCceEEEEccC--ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cC-CeEEEEcccCChHHHHHHhcc-
Q 033236 1 MGKSKVLVVGGT--GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQ-GAHLIEASFADHRSLVEAVKR- 75 (124)
Q Consensus 1 m~~~~ili~Ga~--g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~- 75 (124)
|++|+.+|+|-. ..|+..+++.|.++|.++.....++ ...++.+++. .. ...+++||+++.++++++|+.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-----~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-----RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence 578999999943 7899999999999999999988876 2223333332 22 245899999999999999864
Q ss_pred ------cCEEEEeCccc
Q 033236 76 ------VDVVICTISGV 86 (124)
Q Consensus 76 ------~d~vi~~a~~~ 86 (124)
+|.++|+.+..
T Consensus 79 ~~~~g~lD~lVHsIaFa 95 (259)
T COG0623 79 KKKWGKLDGLVHSIAFA 95 (259)
T ss_pred HHhhCcccEEEEEeccC
Confidence 89999998743
No 314
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.54 E-value=1.8e-06 Score=62.86 Aligned_cols=72 Identities=17% Similarity=0.331 Sum_probs=60.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEA-VKRVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~ 81 (124)
|+++|.|+ |.+|+.+++.|.+.|++|+++++++ +..+... ..+++++.+|.++++.+.++ ++++|.++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~--------~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~ 71 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE--------ERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIA 71 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH--------HHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence 57999996 9999999999999999999999987 2222222 25688999999999999998 888999988
Q ss_pred eCc
Q 033236 82 TIS 84 (124)
Q Consensus 82 ~a~ 84 (124)
+.+
T Consensus 72 ~~~ 74 (453)
T PRK09496 72 VTD 74 (453)
T ss_pred ecC
Confidence 775
No 315
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.54 E-value=1.2e-06 Score=61.43 Aligned_cols=98 Identities=19% Similarity=0.141 Sum_probs=65.9
Q ss_pred eEEEEccCChhcHHHHHHHhhCC-C------eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-----------
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG-H------ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH----------- 66 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g-~------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----------- 66 (124)
++.|+||+|.+|..++..|...+ . ++.++++++.. ...+....|+.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEe
Confidence 68999999999999999998765 2 58888887510 0111222222222
Q ss_pred HHHHHHhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236 67 RSLVEAVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREA-GNVKKRKLNE 116 (124)
Q Consensus 67 ~~~~~~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s 116 (124)
....+.++++|+||+.||..+ ....|..-.+.+.+.+.+. ++-..++.+|
T Consensus 68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 345678889999999998542 2345777788888888888 4323445554
No 316
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.53 E-value=9.9e-07 Score=54.45 Aligned_cols=75 Identities=24% Similarity=0.293 Sum_probs=53.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCe-EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHE-TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
.+++++|.|+ |+.|+.++..|...|.+ |+++.|+. +...+..+.+....+.++.. +++.+...++|+||
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~----~ra~~l~~~~~~~~~~~~~~-----~~~~~~~~~~DivI 80 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTP----ERAEALAEEFGGVNIEAIPL-----EDLEEALQEADIVI 80 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSH----HHHHHHHHHHTGCSEEEEEG-----GGHCHHHHTESEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCH----HHHHHHHHHcCccccceeeH-----HHHHHHHhhCCeEE
Confidence 4689999996 99999999999999964 99999987 33334444443445555554 33447777899999
Q ss_pred EeCccc
Q 033236 81 CTISGV 86 (124)
Q Consensus 81 ~~a~~~ 86 (124)
++.+..
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 987643
No 317
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=98.53 E-value=1.5e-06 Score=68.74 Aligned_cols=76 Identities=22% Similarity=0.264 Sum_probs=57.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-Ce-------------EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HE-------------TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS 68 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 68 (124)
+++|+|.|+ |.+|+..++.|.+.+ .+ |.+.+++. ....+.... .++++.+..|++|.++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~----~~a~~la~~--~~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL----KDAKETVEG--IENAEAVQLDVSDSES 641 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH----HHHHHHHHh--cCCCceEEeecCCHHH
Confidence 468999996 999999999998753 33 66666665 122222211 2367889999999999
Q ss_pred HHHHhcccCEEEEeCcc
Q 033236 69 LVEAVKRVDVVICTISG 85 (124)
Q Consensus 69 ~~~~~~~~d~vi~~a~~ 85 (124)
+.++++++|+|+++.++
T Consensus 642 L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPA 658 (1042)
T ss_pred HHHhhcCCCEEEECCCc
Confidence 99999999999999874
No 318
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.51 E-value=1.5e-06 Score=54.13 Aligned_cols=106 Identities=17% Similarity=0.191 Sum_probs=68.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCC--eEEEEcccCChHHHHHHhcccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQG--AHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
||+.|+|++|.+|.+++..|...+ .++.++++++........+......... ..+.. .+. +.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence 689999999999999999999887 6899999986322222222221111222 22222 223 345679999
Q ss_pred EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+..+|..+ ..+.|..-.+.+.+.+.+.++-..++.+|
T Consensus 74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99998542 23567777888888888887323444444
No 319
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=98.47 E-value=7e-06 Score=58.03 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC--------------------CchHHHHHhhhhc-cCCeEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG--------------------LDIDKLQMLLSFK-KQGAHLI 59 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~--------------------~~~~~~~~~~~~~-~~~~~~~ 59 (124)
+.++|+|.|+ |++|.++++.|++.|. ++++++++.-+ ......+.+..+. .-.++.+
T Consensus 23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 3568999995 9999999999999996 88888887411 1111123333332 2346677
Q ss_pred EcccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 60 EASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 60 ~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
..|++ ++.+.++++++|+||.+... ...-..+-+.|.+.+ + .+|+.+
T Consensus 102 ~~~~~-~~~~~~~~~~~DlVid~~D~-------~~~r~~in~~~~~~~-i-p~i~~~ 148 (338)
T PRK12475 102 VTDVT-VEELEELVKEVDLIIDATDN-------FDTRLLINDLSQKYN-I-PWIYGG 148 (338)
T ss_pred eccCC-HHHHHHHhcCCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 77775 56788889999999998752 233344667777777 3 455544
No 320
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=98.44 E-value=9.1e-06 Score=57.47 Aligned_cols=104 Identities=18% Similarity=0.264 Sum_probs=69.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC--------------------CchHHHHHhhhhc-cCCeEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG--------------------LDIDKLQMLLSFK-KQGAHLI 59 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~--------------------~~~~~~~~~~~~~-~~~~~~~ 59 (124)
+..+|+|.|+ |++|..++..|+..|. ++++++.+.-+ ......+.+..+. .-.++.+
T Consensus 23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~ 101 (339)
T PRK07688 23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI 101 (339)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 3568999996 9999999999999996 88999876310 1111112222222 2235666
Q ss_pred EcccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 60 EASFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 60 ~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
..+++ ++.+.+++++.|+|+.+.. |...-..+-+.|.+.+ + .+|+.+
T Consensus 102 ~~~~~-~~~~~~~~~~~DlVid~~D-------n~~~r~~ln~~~~~~~-i-P~i~~~ 148 (339)
T PRK07688 102 VQDVT-AEELEELVTGVDLIIDATD-------NFETRFIVNDAAQKYG-I-PWIYGA 148 (339)
T ss_pred eccCC-HHHHHHHHcCCCEEEEcCC-------CHHHHHHHHHHHHHhC-C-CEEEEe
Confidence 66764 5667788999999998865 3444456778888887 3 455544
No 321
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=98.44 E-value=3.1e-06 Score=59.75 Aligned_cols=92 Identities=23% Similarity=0.253 Sum_probs=58.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
++++.|.||+|++|+.+++.|.++++ ++..+.+.++..+. . .+. +.+....|+.+. .++++|+|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~-----l-~~~--g~~i~v~d~~~~-----~~~~vDvV 67 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKE-----L-SFK--GKELKVEDLTTF-----DFSGVDIA 67 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCe-----e-eeC--CceeEEeeCCHH-----HHcCCCEE
Confidence 36899999999999999999999775 44667665422111 1 011 223444455432 23689999
Q ss_pred EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
|.+.| .......++...+.| + .+|-.|+
T Consensus 68 f~A~g--------~g~s~~~~~~~~~~G-~-~VIDlS~ 95 (334)
T PRK14874 68 LFSAG--------GSVSKKYAPKAAAAG-A-VVIDNSS 95 (334)
T ss_pred EECCC--------hHHHHHHHHHHHhCC-C-EEEECCc
Confidence 99887 223556666666677 3 5665554
No 322
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.43 E-value=1.5e-06 Score=62.35 Aligned_cols=75 Identities=20% Similarity=0.385 Sum_probs=55.8
Q ss_pred CCCceEEEEcc---------------C-ChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236 1 MGKSKVLVVGG---------------T-GYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64 (124)
Q Consensus 1 m~~~~ili~Ga---------------~-g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 64 (124)
|.+++++|||| + |.+|.++++++...|++|+++.++.+.. .... +...|++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~--~~~~~v~ 249 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPG--VKSIKVS 249 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCC--cEEEEec
Confidence 45789999998 2 5699999999999999999988765110 1122 3567888
Q ss_pred ChHHH-HHHh----cccCEEEEeCccccc
Q 033236 65 DHRSL-VEAV----KRVDVVICTISGVHF 88 (124)
Q Consensus 65 ~~~~~-~~~~----~~~d~vi~~a~~~~~ 88 (124)
+.+++ ..++ .++|++|++|+..++
T Consensus 250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 250 TAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred cHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 88887 5444 358999999997644
No 323
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.41 E-value=1.1e-06 Score=61.85 Aligned_cols=72 Identities=33% Similarity=0.409 Sum_probs=50.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
.+++++|+||+|.+|+.+++.|+++ | .+++++.|+. .+...+.. ++..+|+ .++.+++.++|+|
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~-----~rl~~La~------el~~~~i---~~l~~~l~~aDiV 219 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ-----ERLQELQA------ELGGGKI---LSLEEALPEADIV 219 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH-----HHHHHHHH------HhccccH---HhHHHHHccCCEE
Confidence 4689999999999999999999864 5 6889988876 11221111 1112333 3466888899999
Q ss_pred EEeCcccc
Q 033236 80 ICTISGVH 87 (124)
Q Consensus 80 i~~a~~~~ 87 (124)
+++++...
T Consensus 220 v~~ts~~~ 227 (340)
T PRK14982 220 VWVASMPK 227 (340)
T ss_pred EECCcCCc
Confidence 99998543
No 324
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.40 E-value=2.7e-06 Score=62.01 Aligned_cols=76 Identities=21% Similarity=0.265 Sum_probs=55.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
|++++++|+|+++ +|..+++.|++.|++|++++++.... ..+....+...++.++.+|..+ ....++|+||
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~---~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv 73 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQ---LKEALEELGELGIELVLGEYPE-----EFLEGVDLVV 73 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEE
Confidence 3468999999755 99999999999999999998875211 1111222334467788888765 3345799999
Q ss_pred EeCcc
Q 033236 81 CTISG 85 (124)
Q Consensus 81 ~~a~~ 85 (124)
+++|.
T Consensus 74 ~~~g~ 78 (450)
T PRK14106 74 VSPGV 78 (450)
T ss_pred ECCCC
Confidence 99884
No 325
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.40 E-value=4.2e-06 Score=58.84 Aligned_cols=98 Identities=18% Similarity=0.077 Sum_probs=65.3
Q ss_pred eEEEEccCChhcHHHHHHHhhCC-C------eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChH----------
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG-H------ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHR---------- 67 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g-~------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------- 67 (124)
++.|+|++|.+|..++..|...+ . ++.++++++.. ...+....|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence 58999999999999999998755 2 58899886521 01222233333322
Q ss_pred -HHHHHhcccCEEEEeCccccc--------eecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236 68 -SLVEAVKRVDVVICTISGVHF--------RSHNILMQLKLVDAIREA-GNVKKRKLNE 116 (124)
Q Consensus 68 -~~~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~i~~s 116 (124)
+..+.++++|+||++||...- ...|..-.+.+.+.+.+. ++-..++.+|
T Consensus 67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 345678899999999985321 235677778888888887 3323444544
No 326
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=98.39 E-value=6.6e-06 Score=61.71 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=59.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 82 (124)
.+++|.| .|.+|+.+++.|.++|++++++++++ ++.+...+.+..++.+|.+|++.++++ .+++|.++-+
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~--------~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSR--------TRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 4688888 59999999999999999999999987 233333346788999999999999987 5789988776
Q ss_pred Cc
Q 033236 83 IS 84 (124)
Q Consensus 83 a~ 84 (124)
.+
T Consensus 489 ~~ 490 (558)
T PRK10669 489 IP 490 (558)
T ss_pred cC
Confidence 54
No 327
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=98.39 E-value=3.5e-06 Score=59.66 Aligned_cols=98 Identities=18% Similarity=0.178 Sum_probs=60.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhC-CCeEEEEeCCCCCCchHHHHHhhhhccCCeEE-EEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQRPDIGLDIDKLQMLLSFKKQGAHL-IEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~d~vi 80 (124)
++++.|.||+|++|+.+++.|.+. +.++.++.++.+.. +..... .+.+.. ...++.+.+.. ..+++|+|+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g-----~~l~~~-~~~~~~~~~~~~~~~~~~--~~~~vD~Vf 73 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAG-----KPLSDV-HPHLRGLVDLVLEPLDPE--ILAGADVVF 73 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccC-----cchHHh-CcccccccCceeecCCHH--HhcCCCEEE
Confidence 378999999999999999999886 57887776643111 001000 011111 12233333332 456799999
Q ss_pred EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
.|.+. ....+++..+.+.| .++|-.|+.
T Consensus 74 ~alP~--------~~~~~~v~~a~~aG--~~VID~S~~ 101 (343)
T PRK00436 74 LALPH--------GVSMDLAPQLLEAG--VKVIDLSAD 101 (343)
T ss_pred ECCCc--------HHHHHHHHHHHhCC--CEEEECCcc
Confidence 98863 23456777777777 577777743
No 328
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.37 E-value=2.6e-05 Score=47.16 Aligned_cols=96 Identities=25% Similarity=0.325 Sum_probs=57.3
Q ss_pred eEEEEccCChhcHHHHHHHhhCC-CeEEEE-eCCC-CCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG-HETYVL-QRPD-IGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~-~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
++.|.||+|++|+.+++.|.+.. .++..+ .+++ .+.. .....+. .....-+..+-.+.+.+ +++|+||.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~--~~~~~~~--~~~~~~~~~~~~~~~~~----~~~Dvvf~ 72 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKP--LSEVFPH--PKGFEDLSVEDADPEEL----SDVDVVFL 72 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSB--HHHTTGG--GTTTEEEBEEETSGHHH----TTESEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCe--eehhccc--cccccceeEeecchhHh----hcCCEEEe
Confidence 68999999999999999999865 565544 4444 1111 1111111 11222221111344444 78999999
Q ss_pred eCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
|.+ ......+.+.+.+.| + ++|-.|+.
T Consensus 73 a~~--------~~~~~~~~~~~~~~g-~-~ViD~s~~ 99 (121)
T PF01118_consen 73 ALP--------HGASKELAPKLLKAG-I-KVIDLSGD 99 (121)
T ss_dssp -SC--------HHHHHHHHHHHHHTT-S-EEEESSST
T ss_pred cCc--------hhHHHHHHHHHhhCC-c-EEEeCCHH
Confidence 987 334567788888888 3 67766644
No 329
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.37 E-value=1.3e-05 Score=58.50 Aligned_cols=99 Identities=21% Similarity=0.269 Sum_probs=69.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~ 81 (124)
+++++|.|+ |.+|+.+++.|.+.|++|+++++++ +..+.... ...++.++.+|.++++.+.++ ++++|.++.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~-----~~~~~~~~-~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP-----ERAEELAE-ELPNTLVLHGDGTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH-----HHHHHHHH-HCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence 478999996 9999999999999999999999987 22222211 123577999999999999776 578999887
Q ss_pred eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+.+.. ..|. .+...+++.+ ..+++...
T Consensus 304 ~~~~~---~~n~----~~~~~~~~~~-~~~ii~~~ 330 (453)
T PRK09496 304 LTNDD---EANI----LSSLLAKRLG-AKKVIALV 330 (453)
T ss_pred CCCCc---HHHH----HHHHHHHHhC-CCeEEEEE
Confidence 66521 2333 2333445555 45555443
No 330
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=98.36 E-value=8e-06 Score=61.80 Aligned_cols=88 Identities=19% Similarity=0.240 Sum_probs=68.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 82 (124)
++++|.| .|.+|+.+++.|.++|++++++++++ +..+.....+..++.+|.++++.++++ ++++|.++.+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDI--------SAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 5788888 59999999999999999999999997 333333346788999999999999998 6789998887
Q ss_pred CccccceecchHHHHHHHHHHHHhC
Q 033236 83 ISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 83 a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
.+. ......+++.+++.+
T Consensus 472 ~~d-------~~~n~~i~~~~r~~~ 489 (601)
T PRK03659 472 CNE-------PEDTMKIVELCQQHF 489 (601)
T ss_pred eCC-------HHHHHHHHHHHHHHC
Confidence 652 233445666666655
No 331
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=98.31 E-value=1.7e-05 Score=57.52 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=33.5
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|..|++.|.| .|++|..++..|++.|++|+++++++
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~ 36 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQ 36 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCH
Confidence 6778999998 59999999999999999999999987
No 332
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=98.29 E-value=7e-06 Score=57.37 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=66.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCC--CCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPD--IGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
|++.|+|++|.+|..++..|+..|. +|++++|++ ........+..+.....+... ....+ .+.. .++++|+|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d~~-~l~~aDiV 76 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SDLS-DVAGSDIV 76 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CCHH-HhCCCCEE
Confidence 6899999999999999999999985 599999854 112112222211111111111 11111 1233 48899999
Q ss_pred EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
|.++|... ....|..-.+.+++.+.+.++-..++..++-.
T Consensus 77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npv 124 (309)
T cd05294 77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPV 124 (309)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 99998432 12345566777777777776323555555433
No 333
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.29 E-value=7.7e-06 Score=53.13 Aligned_cols=78 Identities=22% Similarity=0.408 Sum_probs=47.9
Q ss_pred CCCceEEEEcc----------------CChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccC
Q 033236 1 MGKSKVLVVGG----------------TGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFA 64 (124)
Q Consensus 1 m~~~~ili~Ga----------------~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 64 (124)
+.+++++||+| +|..|.++++++..+|++|+++....+- + .+.+++.+...-.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~---------~--~p~~~~~i~v~sa 69 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL---------P--PPPGVKVIRVESA 69 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-SSH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc---------c--ccccceEEEecch
Confidence 35677777765 6899999999999999999999876410 0 1346777765432
Q ss_pred Ch--HHHHHHhcccCEEEEeCccccce
Q 033236 65 DH--RSLVEAVKRVDVVICTISGVHFR 89 (124)
Q Consensus 65 ~~--~~~~~~~~~~d~vi~~a~~~~~~ 89 (124)
+. +.+.+.+++.|++|++|+..+|.
T Consensus 70 ~em~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 70 EEMLEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp HHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred hhhhhhhccccCcceeEEEecchhhee
Confidence 21 34444556689999999877653
No 334
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.28 E-value=1.5e-06 Score=58.19 Aligned_cols=66 Identities=18% Similarity=0.275 Sum_probs=47.2
Q ss_pred EEEc-cCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-------ccCE
Q 033236 7 LVVG-GTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-------RVDV 78 (124)
Q Consensus 7 li~G-a~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~ 78 (124)
.|+. ++|++|.++++.|+++|++|+++++... .. .. ....+|+.+.+++.++++ ++|+
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~---------l~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi 83 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA---------LK---PE--PHPNLSIREIETTKDLLITLKELVQEHDI 83 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh---------cc---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence 4555 4799999999999999999999876320 00 00 123578888877766543 4899
Q ss_pred EEEeCccc
Q 033236 79 VICTISGV 86 (124)
Q Consensus 79 vi~~a~~~ 86 (124)
+|||||..
T Consensus 84 LVnnAgv~ 91 (227)
T TIGR02114 84 LIHSMAVS 91 (227)
T ss_pred EEECCEec
Confidence 99999854
No 335
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=98.28 E-value=2.1e-05 Score=47.90 Aligned_cols=97 Identities=23% Similarity=0.176 Sum_probs=55.7
Q ss_pred ceEEEEccCChhcHHHHHHHhh-CCCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLA-QGHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~-~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
|++.|.|++|..|+.+++.+.+ .+.++... +|+++....+...........+ +.-.+++.++++.+|++|-
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~-------~~v~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLG-------VPVTDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-S-------SBEBS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcc-------cccchhHHHhcccCCEEEE
Confidence 5899999999999999999998 67887554 5555222111111111111111 1122667777777888887
Q ss_pred eCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+.. .......++.+.+.+ +.-++-++
T Consensus 74 fT~--------p~~~~~~~~~~~~~g-~~~ViGTT 99 (124)
T PF01113_consen 74 FTN--------PDAVYDNLEYALKHG-VPLVIGTT 99 (124)
T ss_dssp ES---------HHHHHHHHHHHHHHT--EEEEE-S
T ss_pred cCC--------hHHhHHHHHHHHhCC-CCEEEECC
Confidence 664 344566777777777 44444333
No 336
>PRK04148 hypothetical protein; Provisional
Probab=98.25 E-value=5.5e-05 Score=46.54 Aligned_cols=90 Identities=14% Similarity=0.175 Sum_probs=65.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
+++++..|. | .|..++..|.+.|++|++++.++ . ..+......+.++.+|+.+++ -+..+++|.++.+
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~-----~---aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysi 84 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINE-----K---AVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSI 84 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCH-----H---HHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence 467999984 6 89999999999999999999998 2 222223456789999999876 3456678988777
Q ss_pred CccccceecchHHHHHHHHHHHHhCCccEE
Q 033236 83 ISGVHFRSHNILMQLKLVDAIREAGNVKKR 112 (124)
Q Consensus 83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (124)
-.+ .+-...+++-+.+.+ +.-+
T Consensus 85 rpp-------~el~~~~~~la~~~~-~~~~ 106 (134)
T PRK04148 85 RPP-------RDLQPFILELAKKIN-VPLI 106 (134)
T ss_pred CCC-------HHHHHHHHHHHHHcC-CCEE
Confidence 654 333556777777776 4433
No 337
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.24 E-value=3.5e-06 Score=58.77 Aligned_cols=33 Identities=27% Similarity=0.438 Sum_probs=30.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+++.|+| .|.+|..++..|++.|++|++.+|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence 5799999 69999999999999999999999987
No 338
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.23 E-value=1.5e-05 Score=56.67 Aligned_cols=37 Identities=32% Similarity=0.448 Sum_probs=31.8
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~ 37 (124)
||++++.|+||+|++|+.+++.|.+.. .++..+.+++
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 778899999999999999999999876 5888875554
No 339
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.22 E-value=5.8e-06 Score=53.70 Aligned_cols=108 Identities=19% Similarity=0.307 Sum_probs=56.6
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEc-------------ccCChHHHH
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEA-------------SFADHRSLV 70 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------D~~~~~~~~ 70 (124)
|+|.|.| .|++|..++..|++.|++|++++.++ .+.+ .+......+.+- .+.-..+..
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~-----~~v~---~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~ 71 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDE-----EKVE---ALNNGELPIYEPGLDELLKENVSAGRLRATTDIE 71 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H-----HHHH---HHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCCh-----HHHH---HHhhccccccccchhhhhccccccccchhhhhhh
Confidence 6899998 69999999999999999999999987 2222 222111111111 111112334
Q ss_pred HHhcccCEEEEeCcccc--ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 71 EAVKRVDVVICTISGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 71 ~~~~~~d~vi~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
.+.+++|++|.|.+... ....+.......++.+.+.-+...++.+-|+.+
T Consensus 72 ~ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~~~lvV~~STvp 123 (185)
T PF03721_consen 72 EAIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLRPGDLVVIESTVP 123 (185)
T ss_dssp HHHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHCSCEEEEESSSSS
T ss_pred hhhhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHhhcceEEEccEEE
Confidence 44556899999987322 223455556666666655421235655555543
No 340
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=98.21 E-value=7.4e-05 Score=45.97 Aligned_cols=103 Identities=19% Similarity=0.241 Sum_probs=68.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCC--------C----------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDI--------G----------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~--------~----------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
.++++|.|+ |++|..+++.|+..|. ++++++.+.- . ..+...+.+.... .-+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 467999985 9999999999999995 7888886620 0 1111112222222 3346677777
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+ +.+...++++++|+||.+... ...-..+.+.|.+.+ .++|+.+
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~-------~~~~~~l~~~~~~~~--~p~i~~~ 124 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDS-------LAARLLLNEICREYG--IPFIDAG 124 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSS-------HHHHHHHHHHHHHTT---EEEEEE
T ss_pred c-ccccccccccCCCEEEEecCC-------HHHHHHHHHHHHHcC--CCEEEEE
Confidence 7 567788888999999998762 344456777888887 3666665
No 341
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=98.21 E-value=4.8e-05 Score=50.09 Aligned_cols=104 Identities=16% Similarity=0.164 Sum_probs=65.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCC------------------chHHHHHhhhhc-cCCeEEEEc
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGL------------------DIDKLQMLLSFK-KQGAHLIEA 61 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~------------------~~~~~~~~~~~~-~~~~~~~~~ 61 (124)
.+.+++|.| .|++|..+++.|+..|. ++++++.+.-+. .....+.+..+. .-.++.+..
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 98 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE 98 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence 356899998 59999999999999995 889988773110 011112222221 123444444
Q ss_pred ccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 62 D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ +.+.+.+.+++.|+||.+... ...-..+-+.|.+.+ . .+++.+
T Consensus 99 ~i-~~~~~~~~~~~~D~Vi~~~d~-------~~~r~~l~~~~~~~~-i-p~i~~~ 143 (202)
T TIGR02356 99 RV-TAENLELLINNVDLVLDCTDN-------FATRYLINDACVALG-T-PLISAA 143 (202)
T ss_pred cC-CHHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 44 346677888999999988752 333445667777776 3 455544
No 342
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=98.19 E-value=7.8e-05 Score=49.47 Aligned_cols=103 Identities=21% Similarity=0.202 Sum_probs=65.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC---CC--------------CchHHHHHhhhhc-cCCeEEEEccc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD---IG--------------LDIDKLQMLLSFK-KQGAHLIEASF 63 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~---~~--------------~~~~~~~~~~~~~-~~~~~~~~~D~ 63 (124)
..+++|.|+ |++|..+++.|++.|. ++++++.+. +. ..+...+.+..+. .-.++.+...+
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i 106 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI 106 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence 567999995 9999999999999995 688888772 11 0111112222221 22455555555
Q ss_pred CChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236 64 ADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREA-GNVKKRKLNE 116 (124)
Q Consensus 64 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s 116 (124)
++ +.+.+.++++|+||.+.. |...-..+.+.+.+. + ..+|+.+
T Consensus 107 ~~-~~~~~~~~~~DvVI~a~D-------~~~~r~~l~~~~~~~~~--~p~I~~~ 150 (212)
T PRK08644 107 DE-DNIEELFKDCDIVVEAFD-------NAETKAMLVETVLEHPG--KKLVAAS 150 (212)
T ss_pred CH-HHHHHHHcCCCEEEECCC-------CHHHHHHHHHHHHHhCC--CCEEEee
Confidence 44 567788899999998853 333344566777777 6 3455543
No 343
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=98.19 E-value=3e-05 Score=58.98 Aligned_cols=72 Identities=21% Similarity=0.332 Sum_probs=59.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 82 (124)
++++|.|. |.+|+.+++.|.++|+++++++.++ +..+.....+..++.+|.++++.++++ +++++.++.+
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDP--------DHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 57889984 9999999999999999999999998 333333345788999999999999987 5789988887
Q ss_pred Cc
Q 033236 83 IS 84 (124)
Q Consensus 83 a~ 84 (124)
.+
T Consensus 472 ~~ 473 (621)
T PRK03562 472 ID 473 (621)
T ss_pred eC
Confidence 65
No 344
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.18 E-value=2.1e-06 Score=56.89 Aligned_cols=113 Identities=15% Similarity=0.135 Sum_probs=67.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEE--eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc------
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVL--QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK------ 74 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------ 74 (124)
++.+++||++.+||..++..+..++.+.... .|...+. +.+..-.........+|.++...+..+++
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~-----~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~ 80 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAEL-----EGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG 80 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccc-----cceEEEecCCcceechHHHHHHHHHHHHhhhhhcC
Confidence 4568999999999999999888877544333 3333110 11100011233455566666665555554
Q ss_pred -ccCEEEEeCccc-----------------cceecchHHHHHHHHHHHH----hCCccEEEEecCCcc
Q 033236 75 -RVDVVICTISGV-----------------HFRSHNILMQLKLVDAIRE----AGNVKKRKLNEGMIP 120 (124)
Q Consensus 75 -~~d~vi~~a~~~-----------------~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ss~~~ 120 (124)
+.|.+|||||.. ++++.|..+...+.+.+.+ ....+-++++||...
T Consensus 81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa 148 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA 148 (253)
T ss_pred CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh
Confidence 279999999843 2355666666665555543 211256788887654
No 345
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.16 E-value=2.8e-05 Score=54.92 Aligned_cols=94 Identities=17% Similarity=0.223 Sum_probs=55.3
Q ss_pred CCC-ceEEEEccCChhcHHHHHHHhhCCCe---EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhccc
Q 033236 1 MGK-SKVLVVGGTGYIGRRIVKASLAQGHE---TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRV 76 (124)
Q Consensus 1 m~~-~~ili~Ga~g~iG~~l~~~l~~~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (124)
|++ +++.|+||+|++|+.+++.|.++++. +..+....+. .+.. ...+ ...++.+.+... ++++
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-----G~~l---~~~~---~~l~~~~~~~~~--~~~v 67 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESA-----GHSV---PFAG---KNLRVREVDSFD--FSQV 67 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-----CCee---ccCC---cceEEeeCChHH--hcCC
Confidence 443 68999999999999999999976643 3334332210 0111 1111 123333333222 4789
Q ss_pred CEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 77 DVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 77 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
|++|.+.+. .....+++.+.+.| + ++|-.|+
T Consensus 68 D~vFla~p~--------~~s~~~v~~~~~~G-~-~VIDlS~ 98 (336)
T PRK05671 68 QLAFFAAGA--------AVSRSFAEKARAAG-C-SVIDLSG 98 (336)
T ss_pred CEEEEcCCH--------HHHHHHHHHHHHCC-C-eEEECch
Confidence 999998862 22345777777777 3 5666654
No 346
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.16 E-value=2.3e-06 Score=56.98 Aligned_cols=37 Identities=27% Similarity=0.647 Sum_probs=32.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG 39 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~ 39 (124)
.++..++|++||+|.++++.+...||.+.-+.|+.-+
T Consensus 2 i~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas 38 (283)
T KOG4288|consen 2 IPKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGAS 38 (283)
T ss_pred CccceeecccccchhhhhHHHHhcCceEEEeccccCC
Confidence 4678899999999999999999999999999888633
No 347
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.15 E-value=1.7e-05 Score=49.62 Aligned_cols=74 Identities=23% Similarity=0.289 Sum_probs=48.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
.+++++|+|+ |.+|..+++.|.+.| ++|++.+|++ +...+..+...... +..+..+. .++.+++|+|+
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~----~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~Dvvi 86 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTL----EKAKALAERFGELG---IAIAYLDL---EELLAEADLII 86 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH----HHHHHHHHHHhhcc---cceeecch---hhccccCCEEE
Confidence 3578999996 999999999999986 8899999986 22222222211111 22233333 33478899999
Q ss_pred EeCccc
Q 033236 81 CTISGV 86 (124)
Q Consensus 81 ~~a~~~ 86 (124)
++.++.
T Consensus 87 ~~~~~~ 92 (155)
T cd01065 87 NTTPVG 92 (155)
T ss_pred eCcCCC
Confidence 998754
No 348
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=98.14 E-value=0.00017 Score=47.50 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=64.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCC---CCCCchH--------------HHHHhhhhc-cCCeEEEEcc
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRP---DIGLDID--------------KLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~---~~~~~~~--------------~~~~~~~~~-~~~~~~~~~D 62 (124)
+.++++|.|+ |++|+.++..|++.|. ++++++++ .+....+ ..+.+..+. .-.++.+..+
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 3568999995 9999999999999997 69998887 2211110 111222221 1245555566
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ .+.+.++++++|+||-+.. |...-..+.+.+.+.-+...++..+
T Consensus 99 i~-~~~~~~~~~~~DlVi~a~D-------n~~~k~~l~~~~~~~~~~~~ii~~~ 144 (200)
T TIGR02354 99 IT-EENIDKFFKDADIVCEAFD-------NAEAKAMLVNAVLEKYKDKYLIAAS 144 (200)
T ss_pred CC-HhHHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHHcCCCcEEEEe
Confidence 64 5678888999999998742 2333344556665543123444433
No 349
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=98.14 E-value=0.00012 Score=51.31 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=67.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
++|+.|+|+ |.+|..++..|+..|. ++.+++++.........+....... .++.+... + . +.++++|+|
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~adiv 77 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDADLV 77 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCCCCEE
Confidence 358999997 9999999999998884 8999999774433333333322111 22223221 2 2 346789999
Q ss_pred EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
|..+|..+ ..+.|..-.+.+++.+.+.++-..++..|
T Consensus 78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99998532 23456777788888888876322344443
No 350
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=98.11 E-value=8.7e-05 Score=51.81 Aligned_cols=105 Identities=17% Similarity=0.242 Sum_probs=66.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhh--ccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSF--KKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
+++.|.|+ |.+|+.++..|+..| .++.++++++...+....+..... .......... +.+ .++++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~~~----~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---DYS----DCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---CHH----HhCCCCEE
Confidence 47899995 999999999999998 689999998743322222221111 1122223222 222 35789999
Q ss_pred EEeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 80 ICTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 80 i~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
|+++|..+ ..+.|..-.+.+.+.+.+.++-..++.+|
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 99998532 23456666778888888876322344443
No 351
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=98.10 E-value=3.2e-05 Score=54.77 Aligned_cols=90 Identities=17% Similarity=0.234 Sum_probs=55.5
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeE---EEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHET---YVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
++.|.||+|++|+.+++.|.++++++ ..+.+.++.. + .+...+......|+. . ..++++|++|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-----~---~~~~~~~~~~~~~~~-~----~~~~~~D~v~~ 67 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-----R---KVTFKGKELEVNEAK-I----ESFEGIDIALF 67 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-----C---eeeeCCeeEEEEeCC-h----HHhcCCCEEEE
Confidence 57899999999999999999877654 3344544111 0 111122345555553 1 23478999999
Q ss_pred eCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
++|. ......++.+.+.| + ++|-.|+
T Consensus 68 a~g~--------~~s~~~a~~~~~~G-~-~VID~ss 93 (339)
T TIGR01296 68 SAGG--------SVSKEFAPKAAKCG-A-IVIDNTS 93 (339)
T ss_pred CCCH--------HHHHHHHHHHHHCC-C-EEEECCH
Confidence 9982 23455666666667 3 4554443
No 352
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.09 E-value=8.3e-05 Score=49.48 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=31.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|++.|+|++|.+|..++..|.+.|++|.+.+|++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence 5799999889999999999999999999998887
No 353
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=98.08 E-value=3e-05 Score=55.04 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=57.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhC-CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEE-EcccCChHHHHHHhcccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLI-EASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~d~vi 80 (124)
+++.|.||+|++|..+++.|.+. +.++..+ +++++..+ ...+.. +.+... ..++.+. +..++.+++|+||
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk-~~~~~~-----~~l~~~~~~~~~~~-~~~~~~~~~DvVf 73 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGK-PVSEVH-----PHLRGLVDLNLEPI-DEEEIAEDADVVF 73 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCC-ChHHhC-----ccccccCCceeecC-CHHHhhcCCCEEE
Confidence 47999999999999999999987 4777744 43321110 000101 111111 1112111 2233445799999
Q ss_pred EeCccccceecchHHHHHHHHHHHHhCCccEEEEecCC
Q 033236 81 CTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEGM 118 (124)
Q Consensus 81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~ 118 (124)
.+.+. ....+++..+.+.| .++|-.|+.
T Consensus 74 ~alP~--------~~s~~~~~~~~~~G--~~VIDlS~~ 101 (346)
T TIGR01850 74 LALPH--------GVSAELAPELLAAG--VKVIDLSAD 101 (346)
T ss_pred ECCCc--------hHHHHHHHHHHhCC--CEEEeCChh
Confidence 98872 24567777777777 578877743
No 354
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=98.08 E-value=0.00013 Score=48.92 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=66.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCC------------------CCchHHHHHhhhhc-cCCeEEEEc
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDI------------------GLDIDKLQMLLSFK-KQGAHLIEA 61 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~ 61 (124)
++.+++|.| +|++|..+++.|+..| -++++++.+.- ...+...+.+.... .-+++.+..
T Consensus 20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 98 (228)
T cd00757 20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE 98 (228)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence 356899998 5999999999999999 47777765420 01111122222222 224566666
Q ss_pred ccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 62 D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ +.+.+.++++++|+||.+... ...-..+-+.|.+.+ + .+|+.+
T Consensus 99 ~i-~~~~~~~~~~~~DvVi~~~d~-------~~~r~~l~~~~~~~~-i-p~i~~g 143 (228)
T cd00757 99 RL-DAENAEELIAGYDLVLDCTDN-------FATRYLINDACVKLG-K-PLVSGA 143 (228)
T ss_pred ee-CHHHHHHHHhCCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 66 456778888999999998762 233345667777776 3 455543
No 355
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=98.07 E-value=2.6e-05 Score=49.57 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=29.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+++|.+.|- |-.|+.+++.|++.|++|++.+|++
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~ 34 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSP 34 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccch
Confidence 378999995 9999999999999999999999987
No 356
>PRK08223 hypothetical protein; Validated
Probab=98.07 E-value=0.00014 Score=50.27 Aligned_cols=105 Identities=11% Similarity=0.042 Sum_probs=65.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCC------------------CCchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDI------------------GLDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
+.+|+|.|+ |++|..+++.|+..| -++.+++.+.- ...+...+.+..+. .-+++.+...
T Consensus 27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~ 105 (287)
T PRK08223 27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEG 105 (287)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 467999985 999999999999999 57788776631 01111122232222 2245566655
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ ++...++++++|+|+.+... .+...-..+-++|.+.+ ..+|+.+
T Consensus 106 l~-~~n~~~ll~~~DlVvD~~D~-----~~~~~r~~ln~~c~~~~--iP~V~~~ 151 (287)
T PRK08223 106 IG-KENADAFLDGVDVYVDGLDF-----FEFDARRLVFAACQQRG--IPALTAA 151 (287)
T ss_pred cC-ccCHHHHHhCCCEEEECCCC-----CcHHHHHHHHHHHHHcC--CCEEEEe
Confidence 54 55678888999999866542 11233455667888877 3455543
No 357
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.03 E-value=7.3e-05 Score=55.13 Aligned_cols=108 Identities=13% Similarity=0.216 Sum_probs=66.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcc------------cCChHHH
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEAS------------FADHRSL 69 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D------------~~~~~~~ 69 (124)
|+|.|.| .|++|..++..|++.| ++|++++.++ . +.+.+......+.+-+ +.-..++
T Consensus 2 m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~-----~---~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~ 72 (473)
T PLN02353 2 VKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISV-----P---RIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDV 72 (473)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCH-----H---HHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCH
Confidence 6799998 5999999999999884 8899999987 2 2222222211111111 1111234
Q ss_pred HHHhcccCEEEEeCccccc-------eecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 70 VEAVKRVDVVICTISGVHF-------RSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 70 ~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
.++++++|++|.|.+.... ..++.......++.+.+.-+-..+|...|+.|
T Consensus 73 ~~~i~~advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp 130 (473)
T PLN02353 73 EKHVAEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVP 130 (473)
T ss_pred HHHHhcCCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCC
Confidence 5566779999999873221 14566666777776665432345666666654
No 358
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.02 E-value=0.00012 Score=51.27 Aligned_cols=107 Identities=18% Similarity=0.062 Sum_probs=68.6
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
|++.|+|++|.+|..++..|...+ .++.+++.+ .......+..... ....+... ...+++-+.++++|+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~--~~~~i~~~--~~~~~~y~~~~daDivvi 74 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN--TPAKVTGY--LGPEELKKALKGADVVVI 74 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC--CcceEEEe--cCCCchHHhcCCCCEEEE
Confidence 589999999999999999998887 578888876 2222222322211 11122211 122345677889999999
Q ss_pred eCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 82 TISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 82 ~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+||..+ ..+.|..-.+.+++.+.+.++-..++.+|
T Consensus 75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt 117 (310)
T cd01337 75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS 117 (310)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 998542 23467777888888888887322334444
No 359
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.01 E-value=5e-05 Score=52.58 Aligned_cols=69 Identities=30% Similarity=0.380 Sum_probs=49.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.+++++|+|. |.+|+.+++.|...|++|++..|++ .+.... ...+...+ ..+++.++++++|+|++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~-----~~~~~~---~~~g~~~~-----~~~~l~~~l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS-----ADLARI---TEMGLIPF-----PLNKLEEKVAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHH---HHCCCeee-----cHHHHHHHhccCCEEEE
Confidence 3678999996 8899999999999999999999986 111111 11122221 24567778889999999
Q ss_pred eCc
Q 033236 82 TIS 84 (124)
Q Consensus 82 ~a~ 84 (124)
+.+
T Consensus 216 t~P 218 (287)
T TIGR02853 216 TIP 218 (287)
T ss_pred CCC
Confidence 875
No 360
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.01 E-value=9e-05 Score=53.02 Aligned_cols=111 Identities=23% Similarity=0.279 Sum_probs=72.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeE-EEEcc-----cCChHHHHHHh
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAH-LIEAS-----FADHRSLVEAV 73 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~-~~~~D-----~~~~~~~~~~~ 73 (124)
|++.|.| +|++|...+.-|++.||+|++++.++ .+.+.+..-. .++++ +++-+ ++=..+.++++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~-----~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~ 74 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDE-----SKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV 74 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence 6789998 69999999999999999999999987 3333222211 11221 11111 22234677888
Q ss_pred cccCEEEEeCcccc--ceecchHHHHHHHHHHHHhCCccEEEEecCCcc
Q 033236 74 KRVDVVICTISGVH--FRSHNILMQLKLVDAIREAGNVKKRKLNEGMIP 120 (124)
Q Consensus 74 ~~~d~vi~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~~ 120 (124)
+..|++|.+.|... ....+.......++...+...-.++|.+=|++|
T Consensus 75 ~~adv~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVP 123 (414)
T COG1004 75 KDADVVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKSTVP 123 (414)
T ss_pred hcCCEEEEEcCCCCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcCCCC
Confidence 88999999987432 223346666777777776652236776667765
No 361
>PRK08328 hypothetical protein; Provisional
Probab=98.00 E-value=0.00029 Score=47.37 Aligned_cols=103 Identities=22% Similarity=0.262 Sum_probs=63.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCC------------c--h-HH----HHHhhhhc-cCCeEEEEc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGL------------D--I-DK----LQMLLSFK-KQGAHLIEA 61 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~------------~--~-~~----~~~~~~~~-~~~~~~~~~ 61 (124)
+.+++|.| +|++|..+++.|+..| -++++++.+.-+. + . .+ .+.+..+. .-.++.+..
T Consensus 27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~ 105 (231)
T PRK08328 27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG 105 (231)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence 46799998 4999999999999999 5788887553110 0 0 01 11122222 223555555
Q ss_pred ccCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 62 SFADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 62 D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.+ +++.+.+++++.|+|+.+... ...-..+-+.|.+.+ + .+|+.+
T Consensus 106 ~~-~~~~~~~~l~~~D~Vid~~d~-------~~~r~~l~~~~~~~~-i-p~i~g~ 150 (231)
T PRK08328 106 RL-SEENIDEVLKGVDVIVDCLDN-------FETRYLLDDYAHKKG-I-PLVHGA 150 (231)
T ss_pred cC-CHHHHHHHHhcCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEe
Confidence 55 456678889999999998752 222334556677776 3 455443
No 362
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.00 E-value=4.1e-05 Score=52.90 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=32.6
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|..++|.|.|+ |..|..++..|++.|++|++.++++
T Consensus 1 ~~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 36 (287)
T PRK08293 1 MDIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISD 36 (287)
T ss_pred CCccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 55678999985 9999999999999999999999987
No 363
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=98.00 E-value=0.00044 Score=46.74 Aligned_cols=102 Identities=20% Similarity=0.179 Sum_probs=64.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+++|.|+ |++|..+++.|++.| -++++++.+.-+ ..+...+.+..+. .-+++.+...
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~ 102 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK 102 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence 467999985 999999999999999 578888766311 0111112222222 2234555444
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN 115 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (124)
+ +.+.+.+++++.|+||.+... ...-..+-+.|.+.+ + .+|+.
T Consensus 103 i-~~~~~~~~~~~~DlVvd~~D~-------~~~r~~ln~~~~~~~-i-p~v~~ 145 (240)
T TIGR02355 103 L-DDAELAALIAEHDIVVDCTDN-------VEVRNQLNRQCFAAK-V-PLVSG 145 (240)
T ss_pred C-CHHHHHHHhhcCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEE
Confidence 4 446678889999999998752 233344667777776 3 45543
No 364
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.99 E-value=0.00012 Score=51.52 Aligned_cols=107 Identities=14% Similarity=0.032 Sum_probs=67.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-------eEEEEeCCCCC--CchHHHHHhhhh-c-cCCeEEEEcccCChHHHHH
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-------ETYVLQRPDIG--LDIDKLQMLLSF-K-KQGAHLIEASFADHRSLVE 71 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~ 71 (124)
.+++.|+|++|.+|..++..|+..|. ++.+++.++.. ......+..... . ..++.+. ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHH
Confidence 46899999999999999999998773 68888885422 222222222111 0 0112211 12246
Q ss_pred HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCC-ccEEEEec
Q 033236 72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGN-VKKRKLNE 116 (124)
Q Consensus 72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~s 116 (124)
.++++|+||.+||..+ ....|..-.+.+.+.+.+.++ -..++.+|
T Consensus 75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (322)
T cd01338 75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG 128 (322)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Confidence 6778999999998542 234567777888888888762 23455554
No 365
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.99 E-value=0.00023 Score=48.29 Aligned_cols=89 Identities=19% Similarity=0.241 Sum_probs=66.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi 80 (124)
+++++|.|||+- |+.+++.|.+.|+++++..-...+. ....+..+..+-+.+.+.+.++++ ++++||
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI 70 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI 70 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC----------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence 467999999876 8999999999999888876655211 123466788888889999999987 599999
Q ss_pred EeCccccceecchHHHHHHHHHHHHhC
Q 033236 81 CTISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 81 ~~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
...-|+. ..-+.++.++|.+.+
T Consensus 71 DATHPfA-----~~is~~a~~ac~~~~ 92 (248)
T PRK08057 71 DATHPYA-----AQISANAAAACRALG 92 (248)
T ss_pred ECCCccH-----HHHHHHHHHHHHHhC
Confidence 8766543 333567777777776
No 366
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.99 E-value=0.00026 Score=45.59 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=63.2
Q ss_pred eEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCC---CC--------------CchHHHHHhhhhc-cCCeEEEEcccCC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPD---IG--------------LDIDKLQMLLSFK-KQGAHLIEASFAD 65 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~---~~--------------~~~~~~~~~~~~~-~~~~~~~~~D~~~ 65 (124)
+++|.|+ |++|..+++.|++.|. ++++++.+. +. ..+...+.+..+. .-+++.+...++
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~- 78 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID- 78 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence 4789984 9999999999999996 688888774 11 0111112222221 234555555554
Q ss_pred hHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHh-CCccEEEEec
Q 033236 66 HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREA-GNVKKRKLNE 116 (124)
Q Consensus 66 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~s 116 (124)
.+.+.+.++++|+||.+.. |...-..+.+.+.+. + ..+|+.+
T Consensus 79 ~~~~~~~l~~~DlVi~~~d-------~~~~r~~i~~~~~~~~~--ip~i~~~ 121 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFD-------NAETKAMLAESLLGNKN--KPVVCAS 121 (174)
T ss_pred hhhHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHHCC--CCEEEEe
Confidence 3667888999999999854 233334566777766 5 3455443
No 367
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.98 E-value=0.00019 Score=51.49 Aligned_cols=103 Identities=17% Similarity=0.174 Sum_probs=64.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCC------------------CCchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDI------------------GLDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
.++++|.| +|++|..++..|+..|. ++++++++.- ...+...+.+.... .-.++.+...
T Consensus 135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 56799997 49999999999999995 7888887721 01111122222222 1234444444
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ .+.+..++++.|+||++... ...-..+-+.|.+.+ + .+|+.+
T Consensus 214 ~~-~~~~~~~~~~~D~Vv~~~d~-------~~~r~~ln~~~~~~~-i-p~i~~~ 257 (376)
T PRK08762 214 VT-SDNVEALLQDVDVVVDGADN-------FPTRYLLNDACVKLG-K-PLVYGA 257 (376)
T ss_pred CC-hHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 43 45677788899999998762 222334667777776 3 455443
No 368
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.97 E-value=0.00012 Score=51.34 Aligned_cols=106 Identities=21% Similarity=0.113 Sum_probs=67.1
Q ss_pred eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
|+.|+|++|.+|..++..|...+ .++.++++++ ......+.... . ....+.... +.+++.+.++++|+||.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~-~-~~~~i~~~~--~~~~~~~~~~daDivvit 74 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI-P-TAASVKGFS--GEEGLENALKGADVVVIP 74 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC-C-cCceEEEec--CCCchHHHcCCCCEEEEe
Confidence 58899999999999999998877 4788888876 22222222211 1 112222111 122356788999999999
Q ss_pred Ccccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 83 ISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 83 a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+|..+ ..+.|..-.+.+.+.+.+.++-..++.+|
T Consensus 75 aG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 75 AGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred CCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 98542 23456777788888888877322334444
No 369
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.95 E-value=6.8e-05 Score=53.70 Aligned_cols=73 Identities=25% Similarity=0.377 Sum_probs=53.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
..+++|+|+ |.+|...++.+...|.+|++++|++ .+.+.+...... .+..+..+++.+.+.+.++|+||++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~-----~~~~~l~~~~g~---~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI-----DRLRQLDAEFGG---RIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH-----HHHHHHHHhcCc---eeEeccCCHHHHHHHHccCCEEEEc
Confidence 356899986 9999999999999999999999886 222222111111 2334566788899999999999998
Q ss_pred Cc
Q 033236 83 IS 84 (124)
Q Consensus 83 a~ 84 (124)
++
T Consensus 238 ~~ 239 (370)
T TIGR00518 238 VL 239 (370)
T ss_pred cc
Confidence 74
No 370
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.95 E-value=5.4e-05 Score=52.14 Aligned_cols=70 Identities=24% Similarity=0.383 Sum_probs=46.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCC-eEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQG-AHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+++++|+|+ |++|++++..|...| .+|+++.|+. +...+..+.+.... +.+ +. +..+.+.++|+||
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~----~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivI 190 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV----ERAEELAKLFGALGKAEL---DL----ELQEELADFDLII 190 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHhhhccceee---cc----cchhccccCCEEE
Confidence 578999996 999999999999999 7999999987 22222222222111 111 11 2235567799999
Q ss_pred EeCc
Q 033236 81 CTIS 84 (124)
Q Consensus 81 ~~a~ 84 (124)
|+.+
T Consensus 191 naTp 194 (278)
T PRK00258 191 NATS 194 (278)
T ss_pred ECCc
Confidence 9875
No 371
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.94 E-value=0.00073 Score=41.90 Aligned_cols=101 Identities=20% Similarity=0.209 Sum_probs=64.2
Q ss_pred eEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcccC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEASFA 64 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D~~ 64 (124)
+++|.|+ |++|..+++.|+..|. ++++++.+.-+ ..+...+.+..+. .-.++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4789985 9999999999999995 78888766210 1111112222222 223445555554
Q ss_pred ChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 65 DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 65 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+. .....+++.|+||.+... ......+.+.|.+.+ ..++...
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~-------~~~~~~l~~~~~~~~--i~~i~~~ 121 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDN-------IAVRRALNRACKELG--IPVIDAG 121 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCC-------HHHHHHHHHHHHHcC--CCEEEEc
Confidence 43 346778899999988762 444566788888887 3455554
No 372
>PRK10537 voltage-gated potassium channel; Provisional
Probab=97.93 E-value=0.00031 Score=50.72 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=55.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH-hcccCEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA-VKRVDVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~ 82 (124)
.+++|.|. |.+|+.+++.|.++|.++++++.+. . +.....+..++.+|.+|++.++++ +++++.++.+
T Consensus 241 ~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~----~------~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 241 DHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG----L------EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch----h------hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 56889985 8999999999999999998888653 1 111234577999999999999997 6789998876
Q ss_pred Cc
Q 033236 83 IS 84 (124)
Q Consensus 83 a~ 84 (124)
.+
T Consensus 310 t~ 311 (393)
T PRK10537 310 RD 311 (393)
T ss_pred CC
Confidence 64
No 373
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.93 E-value=0.0001 Score=51.80 Aligned_cols=81 Identities=16% Similarity=0.168 Sum_probs=50.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH---HHhhhhccCCeE--EEEcccCChHHHHHHhcccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL---QMLLSFKKQGAH--LIEASFADHRSLVEAVKRVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~~d 77 (124)
.+++.|.|+ |-+|..++..++..|++|++.++++...+.... +.++.+...+.. .....++-..++..+++++|
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 467999985 999999999999999999999998732211111 111111111110 01112222235677888999
Q ss_pred EEEEeCc
Q 033236 78 VVICTIS 84 (124)
Q Consensus 78 ~vi~~a~ 84 (124)
.|+-+..
T Consensus 86 lViEavp 92 (321)
T PRK07066 86 FIQESAP 92 (321)
T ss_pred EEEECCc
Confidence 9998876
No 374
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.91 E-value=0.00011 Score=51.16 Aligned_cols=69 Identities=28% Similarity=0.357 Sum_probs=50.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.+++++|+|. |.+|+.++..|...|.+|++.+|++ .+..... ..+...+ ..+++.+.+.++|+||+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~-----~~~~~~~---~~G~~~~-----~~~~l~~~l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKS-----AHLARIT---EMGLSPF-----HLSELAEEVGKIDIIFN 216 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHH---HcCCeee-----cHHHHHHHhCCCCEEEE
Confidence 3678999996 8899999999999999999999986 2222221 2233322 23567778889999999
Q ss_pred eCc
Q 033236 82 TIS 84 (124)
Q Consensus 82 ~a~ 84 (124)
+.+
T Consensus 217 t~p 219 (296)
T PRK08306 217 TIP 219 (296)
T ss_pred CCC
Confidence 875
No 375
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.91 E-value=8.3e-05 Score=54.28 Aligned_cols=74 Identities=19% Similarity=0.148 Sum_probs=48.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc-ccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK-RVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi 80 (124)
++++++|+|+++ +|.+.++.|++.|++|.+.+++...... ....+...++.+..++. +..+ .+ ++|.||
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~----~~~~l~~~g~~~~~~~~--~~~~---~~~~~d~vV 73 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENP----EAQELLEEGIKVICGSH--PLEL---LDEDFDLMV 73 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchh----HHHHHHhcCCEEEeCCC--CHHH---hcCcCCEEE
Confidence 367899999865 9999999999999999999876522111 11122334555554432 2222 23 489999
Q ss_pred EeCcc
Q 033236 81 CTISG 85 (124)
Q Consensus 81 ~~a~~ 85 (124)
+++|.
T Consensus 74 ~s~gi 78 (447)
T PRK02472 74 KNPGI 78 (447)
T ss_pred ECCCC
Confidence 99874
No 376
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.90 E-value=0.00045 Score=48.35 Aligned_cols=100 Identities=14% Similarity=0.201 Sum_probs=66.5
Q ss_pred eEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc--c-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK--K-QGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
|+.|.|+ |.+|..++..|+..+ -++.+++.++........+...... . .++.+..+| -+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence 5789997 999999999998887 4789999876444334444333222 1 234444333 3567789999
Q ss_pred EEeCccccc----------eecchHHHHHHHHHHHHhCCccEEE
Q 033236 80 ICTISGVHF----------RSHNILMQLKLVDAIREAGNVKKRK 113 (124)
Q Consensus 80 i~~a~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i 113 (124)
|..||..+- .+.|..-.+.+.+.+.+.+ .+-++
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ 115 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVI 115 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence 999985321 2456677788888888887 34443
No 377
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.90 E-value=0.00087 Score=45.45 Aligned_cols=102 Identities=21% Similarity=0.173 Sum_probs=65.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCC------------------chHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGL------------------DIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~------------------~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+++|.|+ |++|..+++.|+..| -++++++.+.-+. .+...+.+..+. .-+++.+...
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 568999996 999999999999999 5788887663111 011112222222 2345566665
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN 115 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (124)
++ ++.+..++++.|+||.+.. |...-..+-+.|.+.+ ..+|+.
T Consensus 111 i~-~~~~~~~~~~~DiVi~~~D-------~~~~r~~ln~~~~~~~--ip~v~~ 153 (245)
T PRK05690 111 LD-DDELAALIAGHDLVLDCTD-------NVATRNQLNRACFAAK--KPLVSG 153 (245)
T ss_pred CC-HHHHHHHHhcCCEEEecCC-------CHHHHHHHHHHHHHhC--CEEEEe
Confidence 54 4567788899999999875 2333345667777776 345543
No 378
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.89 E-value=0.0005 Score=45.17 Aligned_cols=104 Identities=18% Similarity=0.276 Sum_probs=66.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC---Cc-----------------hHHHHHhhhhc-cCCeEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG---LD-----------------IDKLQMLLSFK-KQGAHLIE 60 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~---~~-----------------~~~~~~~~~~~-~~~~~~~~ 60 (124)
..+++|.|+ |++|..+++.|+..| .++++++.+.-+ .. +...+++.... .-+++.+.
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~ 97 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVE 97 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 468999985 779999999999999 578888766311 00 00112222222 23456666
Q ss_pred cccCC-hHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 61 ASFAD-HRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 61 ~D~~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.++.+ .+.....+++.|+|+.+... ......+-+.|.+.+ + .+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~dvVi~~~d~-------~~~~~~ln~~c~~~~-i-p~i~~~ 145 (198)
T cd01485 98 EDSLSNDSNIEEYLQKFTLVIATEEN-------YERTAKVNDVCRKHH-I-PFISCA 145 (198)
T ss_pred cccccchhhHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 66643 45667778899999977542 334455677888877 3 455555
No 379
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.89 E-value=0.0001 Score=52.27 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=52.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC---eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH---ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
.+++.|.||+|++|+.+++.|.++++ ++..+....+.- +. . ...+.....-++ +++ .++++|+|
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaG--k~---~---~~~~~~~~v~~~-~~~----~~~~~D~v 73 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAG--KK---V---TFEGRDYTVEEL-TED----SFDGVDIA 73 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCC--Ce---e---eecCceeEEEeC-CHH----HHcCCCEE
Confidence 46899999999999999999998775 343333222110 00 0 011122222222 222 34679999
Q ss_pred EEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 80 ICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
|.+++. .....+++.+.+.| .++|-.|+
T Consensus 74 f~a~p~--------~~s~~~~~~~~~~g--~~VIDlS~ 101 (344)
T PLN02383 74 LFSAGG--------SISKKFGPIAVDKG--AVVVDNSS 101 (344)
T ss_pred EECCCc--------HHHHHHHHHHHhCC--CEEEECCc
Confidence 998872 23455555555566 35665554
No 380
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=97.87 E-value=0.00012 Score=52.32 Aligned_cols=74 Identities=23% Similarity=0.310 Sum_probs=60.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhh-ccCCeEEEEcccCChH-HHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSF-KKQGAHLIEASFADHR-SLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-~~~~~~~~~d~v 79 (124)
++.+++.| +|++.+.++..|.+++ .+|++-+|.. ...+.+ +..+++.+..|+.+++ .+.+..++.|.+
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~--------~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~v 72 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTL--------KDAEALVKGINIKAVSLDVADEELALRKEVKPLDLV 72 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcCCceEEEehhhH--------HHHHHHhcCCCccceEEEccchHHHHHhhhccccee
Confidence 57799998 5999999999999886 7888888876 222222 3456899999999998 999999999999
Q ss_pred EEeCcc
Q 033236 80 ICTISG 85 (124)
Q Consensus 80 i~~a~~ 85 (124)
+...+.
T Consensus 73 iSLlP~ 78 (445)
T KOG0172|consen 73 ISLLPY 78 (445)
T ss_pred eeeccc
Confidence 998763
No 381
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.86 E-value=0.00038 Score=48.45 Aligned_cols=68 Identities=19% Similarity=0.316 Sum_probs=45.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|+|.+.| .|..|..++..|.+.|++|.+.+|++ .+.+.+. ..+... ..+.+++.+..+++|+|+.+.
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~-----~~~~~l~---~~g~~~----~~s~~~~~~~~~~~dvIi~~v 67 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQ-----DAVKAMK---EDRTTG----VANLRELSQRLSAPRVVWVMV 67 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHH---HcCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence 4789998 59999999999999999999999987 2222221 122111 134455555556677777776
Q ss_pred c
Q 033236 84 S 84 (124)
Q Consensus 84 ~ 84 (124)
+
T Consensus 68 p 68 (298)
T TIGR00872 68 P 68 (298)
T ss_pred C
Confidence 5
No 382
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=97.86 E-value=0.00063 Score=44.66 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=63.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+++|.|+ |++|..+++.|+..| .++++++.+.-+ ..+...+.+..+. .-.++.....
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~ 99 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD 99 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC
Confidence 568999985 779999999999999 578888766311 0111122233332 2245555555
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ +...+.+++.|+|+.+... ...-..+-+.|.+.+ + .+++.+
T Consensus 100 ~~--~~~~~~~~~~dvVi~~~~~-------~~~~~~ln~~c~~~~-i-p~i~~~ 142 (197)
T cd01492 100 IS--EKPEEFFSQFDVVVATELS-------RAELVKINELCRKLG-V-KFYATG 142 (197)
T ss_pred cc--ccHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 54 2345667899999987642 334455667788877 4 455554
No 383
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.85 E-value=0.00022 Score=48.68 Aligned_cols=98 Identities=18% Similarity=0.136 Sum_probs=64.4
Q ss_pred EEEEccCChhcHHHHHHHhhCC----CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 6 VLVVGGTGYIGRRIVKASLAQG----HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+.|+|++|.+|..++..|+..| .++.++++++........+ +.+..... ....++-.+++.+.++++|+|+.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d-l~~~~~~~---~~~~i~~~~d~~~~~~~aDiVv~ 76 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD-LQDAVEPL---ADIKVSITDDPYEAFKDADVVII 76 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH-HHHhhhhc---cCcEEEECCchHHHhCCCCEEEE
Confidence 4689998999999999999888 7899999887443333332 21211111 11222223345677889999999
Q ss_pred eCccccc--------eecchHHHHHHHHHHHHhC
Q 033236 82 TISGVHF--------RSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 82 ~a~~~~~--------~~~~~~~~~~~~~~~~~~~ 107 (124)
.++.... ...|..-.+.+++.+.+..
T Consensus 77 t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~ 110 (263)
T cd00650 77 TAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS 110 (263)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8875322 2345666777888888776
No 384
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.85 E-value=0.00022 Score=50.22 Aligned_cols=107 Identities=18% Similarity=0.065 Sum_probs=67.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC--C-----eEEEEeCCCCC--CchHHHHHhhhhc--cCCeEEEEcccCChHHHHH
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG--H-----ETYVLQRPDIG--LDIDKLQMLLSFK--KQGAHLIEASFADHRSLVE 71 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~-----~v~~~~r~~~~--~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~ 71 (124)
..++.|+|++|.+|..++..|...+ - ++.+++.++.. ......+...... ..+..+. ..--+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHH
Confidence 4689999999999999999998877 3 78888886421 2222333222110 0112111 22346
Q ss_pred HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhCC-ccEEEEec
Q 033236 72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAGN-VKKRKLNE 116 (124)
Q Consensus 72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~i~~s 116 (124)
.++++|+||.+||..+ ....|..-.+.+.+.+.+.++ -..++.+|
T Consensus 76 ~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 76 AFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 6778999999998542 234567778888888888873 23444444
No 385
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.85 E-value=0.00068 Score=45.61 Aligned_cols=104 Identities=14% Similarity=0.124 Sum_probs=64.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEc
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEA 61 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~ 61 (124)
++.+++|.| .|++|.++++.|++.| -++++++.+.-. ..+...+.+..+. .-.++.+..
T Consensus 10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~ 88 (231)
T cd00755 10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE 88 (231)
T ss_pred hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence 356899998 5999999999999999 588888765311 1111112222222 223455555
Q ss_pred ccCChHHHHHHhc-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 62 SFADHRSLVEAVK-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 62 D~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.++ ++....++. +.|+||.+... ...-..+.+.|.+.+ + .+|.+.
T Consensus 89 ~i~-~~~~~~l~~~~~D~VvdaiD~-------~~~k~~L~~~c~~~~-i-p~I~s~ 134 (231)
T cd00755 89 FLT-PDNSEDLLGGDPDFVVDAIDS-------IRAKVALIAYCRKRK-I-PVISSM 134 (231)
T ss_pred ecC-HhHHHHHhcCCCCEEEEcCCC-------HHHHHHHHHHHHHhC-C-CEEEEe
Confidence 443 455666664 69999998752 334456888888877 3 455544
No 386
>PRK05442 malate dehydrogenase; Provisional
Probab=97.84 E-value=0.00033 Score=49.41 Aligned_cols=107 Identities=17% Similarity=0.070 Sum_probs=65.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC--C-----eEEEEeCCCCC--CchHHHHHhhhh-c-cCCeEEEEcccCChHHHHH
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG--H-----ETYVLQRPDIG--LDIDKLQMLLSF-K-KQGAHLIEASFADHRSLVE 71 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~-----~v~~~~r~~~~--~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~ 71 (124)
++++.|+|++|.+|..++..|...+ - ++.+++.++.. ......+..... . ..++.+. ...-+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHH
Confidence 4689999999999999999988766 2 68888886421 122222222111 0 0122221 12346
Q ss_pred HhcccCEEEEeCcccc--------ceecchHHHHHHHHHHHHhC-CccEEEEec
Q 033236 72 AVKRVDVVICTISGVH--------FRSHNILMQLKLVDAIREAG-NVKKRKLNE 116 (124)
Q Consensus 72 ~~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~s 116 (124)
.++++|+||.+||..+ ....|..-.+.+.+.+.+.. +-..++.+|
T Consensus 77 ~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 77 AFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 6778999999998532 13456677788888888844 223455555
No 387
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.84 E-value=0.00045 Score=48.34 Aligned_cols=104 Identities=22% Similarity=0.242 Sum_probs=67.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCe-EEEEcccCChHHHHHHhcccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGA-HLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+|+.|+|+ |.+|+.++..|+.++ .++.+++.....++-...+.......... ..+.+| .+ -+.++++|+|+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv 74 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV 74 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence 57999999 999999999998776 48999999853333233332222111111 222232 12 45677899999
Q ss_pred EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEE
Q 033236 81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKL 114 (124)
Q Consensus 81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~ 114 (124)
..||..+ ....|..-.+.+.+.+.+.+ .+-+++
T Consensus 75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivl 115 (313)
T COG0039 75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVL 115 (313)
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEE
Confidence 9998442 24567777888888888887 344443
No 388
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=97.84 E-value=0.00051 Score=49.27 Aligned_cols=96 Identities=17% Similarity=0.254 Sum_probs=63.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+++|.|+ |++|..++..|+..| -++++++.+.-+ ......+++..+. .-+++.+...
T Consensus 41 ~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 119 (370)
T PRK05600 41 NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRER 119 (370)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeee
Confidence 467999985 999999999999999 588888876210 1111122222222 2345666665
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhC
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
++ ++.+.++++++|+|+.|... ...-..+-+.|.+.+
T Consensus 120 i~-~~~~~~~~~~~DlVid~~Dn-------~~~r~~in~~~~~~~ 156 (370)
T PRK05600 120 LT-AENAVELLNGVDLVLDGSDS-------FATKFLVADAAEITG 156 (370)
T ss_pred cC-HHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC
Confidence 64 56677889999999988752 333344556777776
No 389
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.84 E-value=0.00022 Score=51.70 Aligned_cols=33 Identities=27% Similarity=0.447 Sum_probs=30.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|+|.|.| .|++|..++..|++.|++|++.++++
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~ 33 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQ 33 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCH
Confidence 4788998 59999999999999999999999987
No 390
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.82 E-value=0.00056 Score=48.81 Aligned_cols=103 Identities=12% Similarity=0.163 Sum_probs=65.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+++|.|+ |++|..+++.|+..| -++++++.+.-+ ..+...+.+..+. .-+++.+...
T Consensus 28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~ 106 (355)
T PRK05597 28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRR 106 (355)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEee
Confidence 568999985 999999999999999 578888766310 1111222232222 2245555566
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ ++...+++++.|+|+.+... ...-..+-++|.+.+ + .+|+.+
T Consensus 107 i~-~~~~~~~~~~~DvVvd~~d~-------~~~r~~~n~~c~~~~-i-p~v~~~ 150 (355)
T PRK05597 107 LT-WSNALDELRDADVILDGSDN-------FDTRHLASWAAARLG-I-PHVWAS 150 (355)
T ss_pred cC-HHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-C-CEEEEE
Confidence 54 45667788999999998752 222334566777776 3 355443
No 391
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.82 E-value=6e-05 Score=52.20 Aligned_cols=66 Identities=23% Similarity=0.347 Sum_probs=44.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
.|++.|.| .|.+|..+++.|.+.|++|.+.+|++ ...+.. ...++.. .++..++++++|+|+.+
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~-----~~~~~~---~~~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNP-----EAVAEV---IAAGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCH-----HHHHHH---HHCCCee-------cCCHHHHHhcCCEEEEe
Confidence 46899998 59999999999999999999988886 222211 1122211 12344456678888877
Q ss_pred Cc
Q 033236 83 IS 84 (124)
Q Consensus 83 a~ 84 (124)
.+
T Consensus 66 vp 67 (296)
T PRK11559 66 LP 67 (296)
T ss_pred CC
Confidence 65
No 392
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.82 E-value=0.00042 Score=47.29 Aligned_cols=67 Identities=27% Similarity=0.252 Sum_probs=43.4
Q ss_pred ceEEEEccCChhcHHHHHHHhhC-CCeEEEEe-CCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQ-GHETYVLQ-RPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++.|+|++|.+|+.+++.+.+. +.++..+. +++... ... -..++...++++++++++|+|+.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~-----~~~----------~~~~i~~~~dl~~ll~~~DvVid 66 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPL-----VGQ----------GALGVAITDDLEAVLADADVLID 66 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc-----ccc----------CCCCccccCCHHHhccCCCEEEE
Confidence 68999999999999999888764 67877654 443111 000 11123233456666667898888
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
++.|
T Consensus 67 ~t~p 70 (257)
T PRK00048 67 FTTP 70 (257)
T ss_pred CCCH
Confidence 7753
No 393
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.82 E-value=0.00032 Score=49.28 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=47.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh----HHHHHHh-cccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH----RSLVEAV-KRVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~-~~~d 77 (124)
+.+++|+|++|.+|..+++.+...|.+|+++++++ .+.+.+.. ..++..+ .|..+. +.+.+.. .++|
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~-----~~~~~~~~--~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd 223 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD-----EKVDLLKN--KLGFDDA-FNYKEEPDLDAALKRYFPNGID 223 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH--hcCCcee-EEcCCcccHHHHHHHhCCCCcE
Confidence 56899999999999999998888899998888876 23333322 0222211 222222 2233332 3589
Q ss_pred EEEEeCc
Q 033236 78 VVICTIS 84 (124)
Q Consensus 78 ~vi~~a~ 84 (124)
+++.+.|
T Consensus 224 ~v~d~~g 230 (338)
T cd08295 224 IYFDNVG 230 (338)
T ss_pred EEEECCC
Confidence 9999887
No 394
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.81 E-value=0.00047 Score=50.49 Aligned_cols=68 Identities=24% Similarity=0.365 Sum_probs=46.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|++.|+||.|.+|..++..|.+.|++|++.+|++. ...+.... .++.. ..+...+++++|+||.+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~----~~~~~a~~---~gv~~-------~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPK----KGKEVAKE---LGVEY-------ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChH----HHHHHHHH---cCCee-------ccCHHHHhccCCEEEEec
Confidence 57999998999999999999999999999999861 11111111 12211 112344566788888877
Q ss_pred cc
Q 033236 84 SG 85 (124)
Q Consensus 84 ~~ 85 (124)
++
T Consensus 67 p~ 68 (437)
T PRK08655 67 PI 68 (437)
T ss_pred CH
Confidence 63
No 395
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.81 E-value=0.0005 Score=47.73 Aligned_cols=72 Identities=26% Similarity=0.378 Sum_probs=47.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccCC-hHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFAD-HRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~-~~~~~~~~~~~d~vi 80 (124)
+.+++|+|++|.+|..+++.+...|.+|+++++++ ...+.... .+.. ++ |..+ .+.+.+. .++|.++
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~---~~~~~~~--~~~~~~~~~~~~-~~~d~v~ 231 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP-----EKLKILKE---LGADYVI--DGSKFSEDVKKL-GGADVVI 231 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHHH---cCCcEEE--ecHHHHHHHHhc-cCCCEEE
Confidence 46799999999999999999999999999988876 22222222 1221 22 2211 2223332 2689999
Q ss_pred EeCcc
Q 033236 81 CTISG 85 (124)
Q Consensus 81 ~~a~~ 85 (124)
+++|.
T Consensus 232 ~~~g~ 236 (332)
T cd08259 232 ELVGS 236 (332)
T ss_pred ECCCh
Confidence 99873
No 396
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.81 E-value=0.00052 Score=47.85 Aligned_cols=109 Identities=12% Similarity=0.137 Sum_probs=62.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
++++.|+|+ |.+|..++..++..|. +|.+++++++.......+.......... ...+....+. +.++++|+||.
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~---~~~i~~~~d~-~~~~~aDiVii 76 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGF---DTKITGTNDY-EDIAGSDVVVI 76 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCC---CcEEEeCCCH-HHHCCCCEEEE
Confidence 378999998 9999999999998764 8999999764322222221111111111 1111111223 34689999999
Q ss_pred eCccccce--------ecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 82 TISGVHFR--------SHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 82 ~a~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++|..... ..|..-...+++.+.+..+-..++..+
T Consensus 77 ~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 77 TAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 98743211 234555666777776665222344444
No 397
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.81 E-value=0.00011 Score=48.39 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=32.0
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|.+|+++|.|. |.+|+++++.|.+.|++|++.++++
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~ 61 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE 61 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35689999996 7999999999999999999888875
No 398
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=97.80 E-value=0.00033 Score=49.06 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=28.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRP 36 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~ 36 (124)
|+.++.|.||+|++|..+++.|.++. .++..+..+
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 45789999999999999999998887 455555544
No 399
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.80 E-value=0.00029 Score=49.51 Aligned_cols=109 Identities=13% Similarity=0.094 Sum_probs=66.3
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
..+++.|+|| |.+|..++..++..| .++.++++++...+....+........... ..+....+++ .++++|+||
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~---~~i~~~~d~~-~l~~ADiVV 78 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN---INILGTNNYE-DIKDSDVVV 78 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCC---eEEEeCCCHH-HhCCCCEEE
Confidence 3578999996 999999999998888 788899988743322222221111101110 1111112344 668999999
Q ss_pred EeCccccc--------eecchHHHHHHHHHHHHhCCccE-EEEec
Q 033236 81 CTISGVHF--------RSHNILMQLKLVDAIREAGNVKK-RKLNE 116 (124)
Q Consensus 81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~i~~s 116 (124)
.++|.... ...|..-.+.+++.+.+.. .+. ++..|
T Consensus 79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvs 122 (319)
T PTZ00117 79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVT 122 (319)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 99975432 2345555677777777776 344 44544
No 400
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.79 E-value=0.00019 Score=52.17 Aligned_cols=73 Identities=18% Similarity=0.326 Sum_probs=51.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
.+++++|.|+ |+.|+.++..|...| .++++..|+. .......+.+. ... ....+++...+.++|+||
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~----~ra~~La~~~~--~~~-----~~~~~~l~~~l~~aDiVI 247 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTI----EKAQKITSAFR--NAS-----AHYLSELPQLIKKADIII 247 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCH----HHHHHHHHHhc--CCe-----EecHHHHHHHhccCCEEE
Confidence 3578999996 999999999999999 5789999986 22222222221 112 223456788888999999
Q ss_pred EeCccc
Q 033236 81 CTISGV 86 (124)
Q Consensus 81 ~~a~~~ 86 (124)
++.+..
T Consensus 248 ~aT~a~ 253 (414)
T PRK13940 248 AAVNVL 253 (414)
T ss_pred ECcCCC
Confidence 998743
No 401
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=97.79 E-value=4.2e-05 Score=51.44 Aligned_cols=102 Identities=18% Similarity=0.148 Sum_probs=71.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhC-C-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQ-G-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~v 79 (124)
.+++|||+-|.+|..+++.|... | ..|++.+....+ +.. -..=.++-.|+.|...+++.+- .+|-+
T Consensus 45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp------~~V----~~~GPyIy~DILD~K~L~eIVVn~RIdWL 114 (366)
T KOG2774|consen 45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP------ANV----TDVGPYIYLDILDQKSLEEIVVNKRIDWL 114 (366)
T ss_pred CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc------hhh----cccCCchhhhhhccccHHHhhccccccee
Confidence 57999999999999999988764 6 455554432200 000 1122477889999999988753 58999
Q ss_pred EEeCccc------c---ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 80 ICTISGV------H---FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 80 i~~a~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+|..+.. + ..++|+.|..|+++.+++++ .+-|+-++
T Consensus 115 ~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPST 159 (366)
T KOG2774|consen 115 VHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPST 159 (366)
T ss_pred eeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeeccc
Confidence 9965422 1 24689999999999999998 65554433
No 402
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.79 E-value=0.0013 Score=45.19 Aligned_cols=105 Identities=15% Similarity=0.204 Sum_probs=65.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC---C-------ch--------HHHHHhhhhc-cCCeEEEEc
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG---L-------DI--------DKLQMLLSFK-KQGAHLIEA 61 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~---~-------~~--------~~~~~~~~~~-~~~~~~~~~ 61 (124)
.+.+++|.| .|++|.++++.|++.| -++++++.+.-. . .+ ...+.+..+. .-.++.+.
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~- 106 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD- 106 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-
Confidence 356899998 4999999999999999 688888766311 0 00 1112222221 11244443
Q ss_pred ccCChHHHHHHhc-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 62 SFADHRSLVEAVK-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 62 D~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
+..+++....++. ++|+||.+.+. ...-..+.+.|.+.+ + .+|.+.+
T Consensus 107 ~~i~~e~~~~ll~~~~D~VIdaiD~-------~~~k~~L~~~c~~~~-i-p~I~~gG 154 (268)
T PRK15116 107 DFITPDNVAEYMSAGFSYVIDAIDS-------VRPKAALIAYCRRNK-I-PLVTTGG 154 (268)
T ss_pred cccChhhHHHHhcCCCCEEEEcCCC-------HHHHHHHHHHHHHcC-C-CEEEECC
Confidence 2335667777764 69999998863 233456788888777 3 4555543
No 403
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.79 E-value=5.6e-05 Score=47.77 Aligned_cols=73 Identities=22% Similarity=0.413 Sum_probs=46.0
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc-----cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK-----KQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
||.|.|| |..|.+++..|.++|++|++..|++ ...+.+.... -+++..- ..+.-..+++++++++|++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~-----~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~I 73 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDE-----EQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADII 73 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCH-----HHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEE
Confidence 5889996 9999999999999999999999987 2222221111 0111111 1222234677888999998
Q ss_pred EEeCc
Q 033236 80 ICTIS 84 (124)
Q Consensus 80 i~~a~ 84 (124)
+.+.+
T Consensus 74 iiavP 78 (157)
T PF01210_consen 74 IIAVP 78 (157)
T ss_dssp EE-S-
T ss_pred Eeccc
Confidence 88776
No 404
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.78 E-value=8.7e-05 Score=51.37 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=31.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG 39 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~ 39 (124)
+++.|.|+ |..|..++..++..|++|++.+++++.
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 47899986 999999999999999999999999843
No 405
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.78 E-value=0.00012 Score=50.54 Aligned_cols=73 Identities=25% Similarity=0.324 Sum_probs=46.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++++|.|| |+.+++++..|++.| .+|+++.|+. +...+..+.+..........+..+.+... ..|.+||
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~----~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliIN 196 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTR----ERAEELADLFGELGAAVEAAALADLEGLE----EADLLIN 196 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHhhhccccccccccccccccc----ccCEEEE
Confidence 478999996 999999999999999 6899999997 23333333333222211122222222222 6899999
Q ss_pred eCc
Q 033236 82 TIS 84 (124)
Q Consensus 82 ~a~ 84 (124)
+.+
T Consensus 197 aTp 199 (283)
T COG0169 197 ATP 199 (283)
T ss_pred CCC
Confidence 764
No 406
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.77 E-value=0.00053 Score=46.82 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=30.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~ 37 (124)
+|++.|.|+ |.+|..++..|.+.| ++|.+.+|++
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~ 38 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP 38 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence 477999984 999999999999988 7888889886
No 407
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.76 E-value=0.00011 Score=50.83 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=47.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
.++++|.|+ |+.|++++..|...|. +|++++|+. +......+.+.. ....+... +++.+.++++|+|
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~----~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~~~aDiV 196 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDP----ARAAALADELNARFPAARATAG-----SDLAAALAAADGL 196 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCH----HHHHHHHHHHHhhCCCeEEEec-----cchHhhhCCCCEE
Confidence 468999995 8999999999999995 899999987 222222222221 12222221 2344556789999
Q ss_pred EEeC
Q 033236 80 ICTI 83 (124)
Q Consensus 80 i~~a 83 (124)
||+.
T Consensus 197 InaT 200 (284)
T PRK12549 197 VHAT 200 (284)
T ss_pred EECC
Confidence 9984
No 408
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.76 E-value=0.00026 Score=49.62 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=65.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
.+|+.|+|+ |.+|..++..|+..| .++.+++.++........+....... ....+... .|. + .++++|+|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy---~-~~~~adiv 75 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY---S-VTANSKVV 75 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH---H-HhCCCCEE
Confidence 468999996 999999999998877 57888888773332333332222111 11123321 122 3 36889999
Q ss_pred EEeCccccc--------eecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 80 ICTISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 80 i~~a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
|.++|...- ...|..-.+.+.+.+.+.++-..++.+|
T Consensus 76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 999985321 2345666777778887776322344444
No 409
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.76 E-value=0.0004 Score=48.49 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=47.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HH-HHHHh-cccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RS-LVEAV-KRVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~-~~~~~-~~~d 77 (124)
+.+++|+|++|.+|...++.+...|.+|+++++++ .+.+.... .++..+ .|..+. +. +.... .++|
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~-----~~~~~~~~---lGa~~v-i~~~~~~~~~~~~~~~~~~gvd 209 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD-----EKVAYLKK---LGFDVA-FNYKTVKSLEETLKKASPDGYD 209 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH---cCCCEE-EeccccccHHHHHHHhCCCCeE
Confidence 46899999999999999988888899999888876 33333322 222211 222222 22 22222 2589
Q ss_pred EEEEeCc
Q 033236 78 VVICTIS 84 (124)
Q Consensus 78 ~vi~~a~ 84 (124)
+++.+.|
T Consensus 210 vv~d~~G 216 (325)
T TIGR02825 210 CYFDNVG 216 (325)
T ss_pred EEEECCC
Confidence 9999887
No 410
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.76 E-value=0.00018 Score=49.72 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=48.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++++|.|+ |+.|++++..|.+.|. +|+++.|+. +...+..+.+... ..+.. +...+++.....++|+|||
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~----~ka~~La~~~~~~-~~~~~--~~~~~~~~~~~~~~DiVIn 196 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNP----DKLSRLVDLGVQV-GVITR--LEGDSGGLAIEKAAEVLVS 196 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCH----HHHHHHHHHhhhc-Cccee--ccchhhhhhcccCCCEEEE
Confidence 568999985 9999999999999994 799999987 2222222222211 11111 1122344555677999999
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
+.+.
T Consensus 197 aTp~ 200 (282)
T TIGR01809 197 TVPA 200 (282)
T ss_pred CCCC
Confidence 8753
No 411
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.76 E-value=0.00024 Score=48.75 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=30.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+++++|+|+ |++|++++..|.+.|++|++..|++
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~ 150 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV 150 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567999997 8999999999999999999999886
No 412
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.75 E-value=0.0012 Score=43.65 Aligned_cols=87 Identities=23% Similarity=0.324 Sum_probs=59.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.+++++|.|| |.+|.+-++.|++.|.+|++++.... .....+. ...+++++..++. +++ +++++.||-
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~----~~l~~l~--~~~~i~~~~~~~~-~~d----l~~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE----SELTLLA--EQGGITWLARCFD-ADI----LEGAFLVIA 75 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC----HHHHHHH--HcCCEEEEeCCCC-HHH----hCCcEEEEE
Confidence 5789999996 99999999999999999999987652 1111111 2347888888876 332 467887776
Q ss_pred eCccccceecchHHHHHHHHHHHHhC
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
+.+. ..-...+.+.|.+.+
T Consensus 76 at~d-------~~ln~~i~~~a~~~~ 94 (205)
T TIGR01470 76 ATDD-------EELNRRVAHAARARG 94 (205)
T ss_pred CCCC-------HHHHHHHHHHHHHcC
Confidence 6552 112345666776655
No 413
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.75 E-value=0.00052 Score=47.97 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|++.|.|+ |.+|..++..|++.|++|.+.+|++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~ 34 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP 34 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence 57999985 9999999999999999999999986
No 414
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.75 E-value=0.00019 Score=45.92 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=31.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.+++++|.|+++.+|..+++.|.++|.+|++..|+.
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 468999999855679999999999999998888864
No 415
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=97.75 E-value=0.0011 Score=46.59 Aligned_cols=102 Identities=25% Similarity=0.246 Sum_probs=65.1
Q ss_pred eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcccC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEASFA 64 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D~~ 64 (124)
+++|.|+ |++|..+++.|+..| -++++++.+.-+ .++...+.+..+. .-.++....++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5789985 999999999999999 578888766311 1111112222222 234667777787
Q ss_pred ChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 65 DHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 65 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+.+.....+++.|+|+.+.. |...-..+-+.|...+ ..+|...
T Consensus 80 ~~~~~~~f~~~~DvVv~a~D-------n~~ar~~in~~c~~~~--ip~I~~g 122 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALD-------NLAARRHVNKMCLAAD--VPLIESG 122 (312)
T ss_pred CccchHHHHhcCCEEEECCC-------CHHHHHHHHHHHHHCC--CCEEEEe
Confidence 65445677889999998765 2334455666777666 3455443
No 416
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=97.74 E-value=0.0009 Score=45.12 Aligned_cols=102 Identities=14% Similarity=0.112 Sum_probs=63.2
Q ss_pred eEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcccC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEASFA 64 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D~~ 64 (124)
+++|.| .|++|..+++.|+..| -++++++.+.-+ ..+...+.+.... .-+++.+..++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 478898 5999999999999999 578888766311 0001112222222 234667777776
Q ss_pred ChHHH-HHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 65 DHRSL-VEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 65 ~~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+.++. ...+++.|+|+.+.. |...-..+-+.|.+.+ ..+|..+
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~D-------n~~aR~~ln~~c~~~~--iplI~~g 123 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALD-------NIIARRYVNGMLIFLI--VPLIESG 123 (234)
T ss_pred hhhhchHHHHhCCCEEEECCC-------CHHHHHHHHHHHHHcC--CCEEEEc
Confidence 54443 457889999998764 3444455666676666 3455443
No 417
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.73 E-value=0.0011 Score=46.37 Aligned_cols=96 Identities=19% Similarity=0.267 Sum_probs=60.9
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhc-cCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFK-KQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
|++.|.|+ |.+|..++..|+..| .++.++++++........+...... ......... +. +.++++|+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CH----HHhCCCCEEE
Confidence 47999997 999999999999998 6899999987332222222221110 011222222 22 3478899999
Q ss_pred EeCccccc--------eecchHHHHHHHHHHHHhC
Q 033236 81 CTISGVHF--------RSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 81 ~~a~~~~~--------~~~~~~~~~~~~~~~~~~~ 107 (124)
.+++...- ...|..-.+.+++.+.+.+
T Consensus 73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~ 107 (308)
T cd05292 73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA 107 (308)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99985321 2335666677777777776
No 418
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.73 E-value=0.00038 Score=48.27 Aligned_cols=80 Identities=16% Similarity=0.245 Sum_probs=48.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccC-CeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQ-GAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+++++|.|+ |+.+++++..|...| .+++++.|++... +...+..+.+... .......++.+.+.+...+.++|+||
T Consensus 124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~-~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFF-DKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHH-HHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 578999996 777999999999988 5899999986211 1112222222211 11111122222333555667899999
Q ss_pred EeCc
Q 033236 81 CTIS 84 (124)
Q Consensus 81 ~~a~ 84 (124)
|+.+
T Consensus 202 NaTp 205 (288)
T PRK12749 202 NGTK 205 (288)
T ss_pred ECCC
Confidence 9764
No 419
>PLN02602 lactate dehydrogenase
Probab=97.72 E-value=0.0016 Score=46.40 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=65.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
+|+.|+|+ |.+|..++..|+..+ .++.+++.++........+....... ....+... .+ .. .++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---y~-~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS--TD---YA-VTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC--CC---HH-HhCCCCEEE
Confidence 58999996 999999999998877 47899998764333333333322111 11222221 12 22 378899999
Q ss_pred EeCcccc--------ceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 81 CTISGVH--------FRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 81 ~~a~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.+||..+ ....|..-.+.+++.+.+.++-..++.+|
T Consensus 111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9998542 12345666677888887776323344444
No 420
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.71 E-value=0.0012 Score=43.52 Aligned_cols=68 Identities=21% Similarity=0.198 Sum_probs=45.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICTI 83 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 83 (124)
|++.|.| +|.+|..++..|...|++|++-.|+.++ ............ -...+...+.+.+|+|+-..
T Consensus 2 ~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~----~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLAV 68 (211)
T COG2085 2 MIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPK----ALAAAAAALGPL--------ITGGSNEDAAALADVVVLAV 68 (211)
T ss_pred cEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChh----HHHHHHHhhccc--------cccCChHHHHhcCCEEEEec
Confidence 5566665 7999999999999999999988666632 222222211222 22344566777899888877
Q ss_pred c
Q 033236 84 S 84 (124)
Q Consensus 84 ~ 84 (124)
+
T Consensus 69 P 69 (211)
T COG2085 69 P 69 (211)
T ss_pred c
Confidence 6
No 421
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.71 E-value=0.0027 Score=44.80 Aligned_cols=106 Identities=15% Similarity=0.140 Sum_probs=66.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhc--cCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFK--KQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
.+++.|+|+ |.+|..++..++..| .++.+++.++........+...... .....+... .| + +.++++|+|
T Consensus 6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDiV 78 (321)
T PTZ00082 6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDVV 78 (321)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCEE
Confidence 357999995 999999999999888 4899999987543222333222211 112222221 12 3 356899999
Q ss_pred EEeCcccc-------------ceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236 80 ICTISGVH-------------FRSHNILMQLKLVDAIREAGNVK-KRKLNE 116 (124)
Q Consensus 80 i~~a~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s 116 (124)
|.++|... ....|..-.+.+++.+.+.. .+ .++..|
T Consensus 79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~s 128 (321)
T PTZ00082 79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVIT 128 (321)
T ss_pred EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 99997532 12345666677788887776 34 455555
No 422
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.71 E-value=0.00053 Score=47.89 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
++|++.|.|+ |.+|.+++..|.+.|++|++.+|++
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678999985 9999999999999999999999876
No 423
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.70 E-value=0.00089 Score=46.83 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=63.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
|++.|.|+ |.+|..++..++..|. +|++++.++.-......+..+....... ...+.-..++.. ++++|+||.+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~---~~~i~~t~d~~~-~~~aDiVIit 76 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGF---DTKVTGTNNYAD-TANSDIVVIT 76 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCC---CcEEEecCCHHH-hCCCCEEEEc
Confidence 67999996 9999999999999875 8999998653211111112111111111 111211122333 5789999999
Q ss_pred Cccccc--------eecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 83 ISGVHF--------RSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 83 a~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+|...- ...|..-.+.+++.+.+.++-..++..|
T Consensus 77 ag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t 118 (305)
T TIGR01763 77 AGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS 118 (305)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 984321 1256677777888887776222344444
No 424
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=97.70 E-value=0.0012 Score=47.72 Aligned_cols=103 Identities=18% Similarity=0.198 Sum_probs=63.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+|+|.|+ |++|..+++.|+..|. ++++++.+.-+ ..+...+.+..+. .-+++.+..+
T Consensus 42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~ 120 (392)
T PRK07878 42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFR 120 (392)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEecc
Confidence 467999985 9999999999999994 77777755210 1111112222222 1235556666
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ .+...++++++|+|+.+.. |...-..+-++|.+.+ ..+|+.+
T Consensus 121 i~-~~~~~~~~~~~D~Vvd~~d-------~~~~r~~ln~~~~~~~--~p~v~~~ 164 (392)
T PRK07878 121 LD-PSNAVELFSQYDLILDGTD-------NFATRYLVNDAAVLAG--KPYVWGS 164 (392)
T ss_pred CC-hhHHHHHHhcCCEEEECCC-------CHHHHHHHHHHHHHcC--CCEEEEE
Confidence 54 4556778899999998764 2333334667777776 3455543
No 425
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.70 E-value=0.0003 Score=52.24 Aligned_cols=80 Identities=20% Similarity=0.123 Sum_probs=48.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHH--H----HhhhhccCCeEEEEcccCChHHHHHHhccc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKL--Q----MLLSFKKQGAHLIEASFADHRSLVEAVKRV 76 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~--~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (124)
.|+|.|.| +|.+|..++..|++.|++|++.++++...+.... + ....+..... ...+.+.-.+++..+++++
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~g~i~~~~~~~ea~~~a 81 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPL-PPEGRLTFCASLAEAVAGA 81 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchh-hhhhceEeeCCHHHHhcCC
Confidence 36899998 5999999999999999999999998722111000 0 0000000000 0001122234566778899
Q ss_pred CEEEEeCc
Q 033236 77 DVVICTIS 84 (124)
Q Consensus 77 d~vi~~a~ 84 (124)
|+|+-+..
T Consensus 82 D~Vieavp 89 (495)
T PRK07531 82 DWIQESVP 89 (495)
T ss_pred CEEEEcCc
Confidence 99998776
No 426
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.68 E-value=0.00013 Score=50.46 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=32.5
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|..+++.|.|+ |.+|..++..|+..|++|++.++++
T Consensus 1 ~~i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 36 (291)
T PRK06035 1 MDIKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSE 36 (291)
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 55578999985 9999999999999999999999987
No 427
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=97.68 E-value=0.0004 Score=49.76 Aligned_cols=68 Identities=24% Similarity=0.371 Sum_probs=53.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++++|.|+ |.+|+.++.+..+.|++|++++.++..+... . .-..+.+|+.|++.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~----~------ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ----V------ADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhH----h------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 368999996 8999999999999999999998876322110 0 113666889999999999999998754
No 428
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.67 E-value=0.00075 Score=48.50 Aligned_cols=35 Identities=31% Similarity=0.541 Sum_probs=31.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.+++.|.||.|.+|..++..|.+.|+.|++.+|++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 36899999899999999999999999999999864
No 429
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.67 E-value=0.00026 Score=48.93 Aligned_cols=33 Identities=30% Similarity=0.494 Sum_probs=30.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
++|.|.|+ |.+|..++..|++.|++|++.++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~ 34 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQ 34 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCH
Confidence 57899996 9999999999999999999999987
No 430
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.00054 Score=48.30 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=56.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccC--ChHHHHHHhcccC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFA--DHRSLVEAVKRVD 77 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~--~~~~~~~~~~~~d 77 (124)
+++++.|.||+|+.|..+++.|.... .++...+.+...- ....+. .++.. .+...+. +++.+ ..+++|
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g-~~~~~~-----~p~l~g~~~l~~~~~~~~~~--~~~~~D 72 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAG-KPVSDV-----HPNLRGLVDLPFQTIDPEKI--ELDECD 72 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcC-CchHHh-----CcccccccccccccCChhhh--hcccCC
Confidence 35789999999999999999999886 5665554433100 011111 11111 1112222 22222 445699
Q ss_pred EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
+||.+.+. .....++..+...+ + ++|-.|.
T Consensus 73 vvFlalPh--------g~s~~~v~~l~~~g-~-~VIDLSa 102 (349)
T COG0002 73 VVFLALPH--------GVSAELVPELLEAG-C-KVIDLSA 102 (349)
T ss_pred EEEEecCc--------hhHHHHHHHHHhCC-C-eEEECCc
Confidence 99998762 22456666776666 3 4666663
No 431
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.65 E-value=0.0003 Score=48.70 Aligned_cols=74 Identities=16% Similarity=0.259 Sum_probs=46.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccC-Ce-EEEEcccCChHHHHHHhcccCEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQ-GA-HLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
+++++|.|+ |+.|++++..|.+.| .+++++.|+. +...+..+.+... +. .....+ ..++......+|+|
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~----~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~div 198 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT----SRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGV 198 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH----HHHHHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEE
Confidence 468999996 999999999999999 4788999986 2222222222111 11 111122 22333344678999
Q ss_pred EEeCc
Q 033236 80 ICTIS 84 (124)
Q Consensus 80 i~~a~ 84 (124)
||+.+
T Consensus 199 INaTp 203 (283)
T PRK14027 199 VNATP 203 (283)
T ss_pred EEcCC
Confidence 99764
No 432
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.63 E-value=0.0012 Score=45.48 Aligned_cols=71 Identities=17% Similarity=0.182 Sum_probs=42.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhC--CCeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQ--GHETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD 77 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~--g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 77 (124)
|+++++.|.| .|.+|+.+++.|.+. ++++..+ +|++ .+.+.... ..+... -..+ ++++++++|
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~-----~~a~~~a~--~~g~~~---~~~~---~eell~~~D 69 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDP-----QRHADFIW--GLRRPP---PVVP---LDQLATHAD 69 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCH-----HHHHHHHH--hcCCCc---ccCC---HHHHhcCCC
Confidence 4567899998 599999999999863 6788755 4544 22221111 011000 0123 344456789
Q ss_pred EEEEeCcc
Q 033236 78 VVICTISG 85 (124)
Q Consensus 78 ~vi~~a~~ 85 (124)
+|+-+++.
T Consensus 70 ~Vvi~tp~ 77 (271)
T PRK13302 70 IVVEAAPA 77 (271)
T ss_pred EEEECCCc
Confidence 98888864
No 433
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.62 E-value=0.00046 Score=48.36 Aligned_cols=73 Identities=26% Similarity=0.335 Sum_probs=51.1
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
.+++++|.|+ |.+|..+++.|...| .+|++++|++ +........+. ... .+.+++.+.+.++|+||
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~----~ra~~la~~~g---~~~-----~~~~~~~~~l~~aDvVi 243 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTY----ERAEELAKELG---GNA-----VPLDELLELLNEADVVI 243 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH----HHHHHHHHHcC---CeE-----EeHHHHHHHHhcCCEEE
Confidence 3678999996 999999999998866 7899999986 22222222221 122 23346777788899999
Q ss_pred EeCcccc
Q 033236 81 CTISGVH 87 (124)
Q Consensus 81 ~~a~~~~ 87 (124)
.+.+...
T Consensus 244 ~at~~~~ 250 (311)
T cd05213 244 SATGAPH 250 (311)
T ss_pred ECCCCCc
Confidence 9988533
No 434
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.61 E-value=0.002 Score=44.76 Aligned_cols=94 Identities=19% Similarity=0.245 Sum_probs=58.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH---h--cccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA---V--KRVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~---~--~~~d 77 (124)
+.+++|+|+++.+|..+++.+...|.+++++++++ ...+.+... ... ...|..+.+....+ . .++|
T Consensus 167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~d 237 (342)
T cd08266 167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE-----DKLERAKEL---GAD-YVIDYRKEDFVREVRELTGKRGVD 237 (342)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHc---CCC-eEEecCChHHHHHHHHHhCCCCCc
Confidence 45799999999999999999999999999888876 222222221 111 12344444433332 2 2589
Q ss_pred EEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 78 VVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 78 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.+++++|. ......++.+.+.| +++.++
T Consensus 238 ~~i~~~g~--------~~~~~~~~~l~~~G---~~v~~~ 265 (342)
T cd08266 238 VVVEHVGA--------ATWEKSLKSLARGG---RLVTCG 265 (342)
T ss_pred EEEECCcH--------HHHHHHHHHhhcCC---EEEEEe
Confidence 99999873 12234445554433 666665
No 435
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.61 E-value=0.00039 Score=48.17 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=32.3
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|+.+++.|.|+ |..|..++..|++.|++|++.++++
T Consensus 2 ~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~ 37 (292)
T PRK07530 2 MAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSA 37 (292)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34578999985 9999999999999999999999987
No 436
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.61 E-value=0.001 Score=48.24 Aligned_cols=71 Identities=27% Similarity=0.357 Sum_probs=55.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
..++++|.|+ |-+|.-++++|.++| .+|++..|+. +...+....+. +++...+++...+..+|+||
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~----erA~~La~~~~--------~~~~~l~el~~~l~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTL----ERAEELAKKLG--------AEAVALEELLEALAEADVVI 243 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCH----HHHHHHHHHhC--------CeeecHHHHHHhhhhCCEEE
Confidence 3578999996 999999999999999 7888889987 23333333222 55666788999999999999
Q ss_pred EeCcc
Q 033236 81 CTISG 85 (124)
Q Consensus 81 ~~a~~ 85 (124)
.+.+.
T Consensus 244 ssTsa 248 (414)
T COG0373 244 SSTSA 248 (414)
T ss_pred EecCC
Confidence 98774
No 437
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=97.60 E-value=0.00085 Score=46.18 Aligned_cols=107 Identities=19% Similarity=0.105 Sum_probs=65.6
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
-++.|.||+|+||+.+...|-... .+..+.+-...+-...... +-+-.......+-++.+.++++++|+|+.
T Consensus 29 ~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlS------HI~T~s~V~g~~g~~~L~~al~~advVvI 102 (345)
T KOG1494|consen 29 LKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLS------HINTNSSVVGFTGADGLENALKGADVVVI 102 (345)
T ss_pred ceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccc------ccCCCCceeccCChhHHHHHhcCCCEEEe
Confidence 479999999999999966554332 2334444332111111111 11112233345557799999999999999
Q ss_pred eCccc--------cceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 82 TISGV--------HFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 82 ~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
-||.- +.+..|..-.+.+..++.+.-+-.++.++|
T Consensus 103 PAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs 145 (345)
T KOG1494|consen 103 PAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS 145 (345)
T ss_pred cCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence 99854 346677777788888887764233444555
No 438
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.60 E-value=0.00093 Score=46.26 Aligned_cols=33 Identities=27% Similarity=0.448 Sum_probs=30.2
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|++.|.|+ |.+|..++..|.+.|++|++++|++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence 47999996 9999999999999999999999975
No 439
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=97.60 E-value=0.0021 Score=43.78 Aligned_cols=91 Identities=25% Similarity=0.357 Sum_probs=62.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc--ccCEEEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--RVDVVIC 81 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~ 81 (124)
|+|+|.|||+- |+.++..|.+.|+ |++..-.+.+ .+.. ........+..+-+.+.+.+.++++ +++.||.
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g-----~~~~-~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID 72 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYG-----GELL-KPELPGLEVRVGRLGDEEGLAEFLRENGIDAVID 72 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhh-----Hhhh-ccccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 78999999876 8999999999998 6555444311 1111 1112456788888889999999986 5999998
Q ss_pred eCccccceecchHHHHHHHHHHHHhC
Q 033236 82 TISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
..-|+. ..-+.++.++|.+.|
T Consensus 73 ATHPfA-----~~is~na~~a~~~~~ 93 (249)
T PF02571_consen 73 ATHPFA-----AEISQNAIEACRELG 93 (249)
T ss_pred CCCchH-----HHHHHHHHHHHhhcC
Confidence 776543 233455666665555
No 440
>PRK07877 hypothetical protein; Provisional
Probab=97.59 E-value=0.0017 Score=50.37 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=68.3
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCC-----------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIG-----------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~-----------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
+.+|+|.|. | +|+.++..|+..|. ++++++.+.-+ +.....+++..+. .-+++.+...
T Consensus 107 ~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~ 184 (722)
T PRK07877 107 RLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDG 184 (722)
T ss_pred cCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 468999998 7 99999999999984 78888765210 1111112222222 3356777777
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
++ ++.+.++++++|+|+.|.. |...-..+-++|.+.+ ..+|+-+
T Consensus 185 i~-~~n~~~~l~~~DlVvD~~D-------~~~~R~~ln~~a~~~~--iP~i~~~ 228 (722)
T PRK07877 185 LT-EDNVDAFLDGLDVVVEECD-------SLDVKVLLREAARARR--IPVLMAT 228 (722)
T ss_pred CC-HHHHHHHhcCCCEEEECCC-------CHHHHHHHHHHHHHcC--CCEEEEc
Confidence 75 7889999999999999886 2333344557777777 3566555
No 441
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.58 E-value=0.001 Score=46.13 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=28.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQR 35 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r 35 (124)
|++.|.|+ |.+|..++..|.+.|++|++++|
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence 57999985 99999999999999999999999
No 442
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.58 E-value=0.0013 Score=46.49 Aligned_cols=74 Identities=27% Similarity=0.435 Sum_probs=47.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHhc--ccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAVK--RVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~--~~d 77 (124)
+.+++|+||+|++|...++.+...|..+++++.++ .+.+.+.. .+...+ .|+.+. +.+.++.. ++|
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~-----~k~~~~~~---lGAd~v-i~y~~~~~~~~v~~~t~g~gvD 213 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS-----EKLELLKE---LGADHV-INYREEDFVEQVRELTGGKGVD 213 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH-----HHHHHHHh---cCCCEE-EcCCcccHHHHHHHHcCCCCce
Confidence 46899999999999999999999997666666554 22222322 222211 123332 34444443 499
Q ss_pred EEEEeCcc
Q 033236 78 VVICTISG 85 (124)
Q Consensus 78 ~vi~~a~~ 85 (124)
+|+...|.
T Consensus 214 vv~D~vG~ 221 (326)
T COG0604 214 VVLDTVGG 221 (326)
T ss_pred EEEECCCH
Confidence 99999883
No 443
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.56 E-value=0.0016 Score=46.18 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=27.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRP 36 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~ 36 (124)
+++.|+|++|++|+.+++.|.+.+ .++..+.++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 479999999999999999998876 688777444
No 444
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.56 E-value=0.00051 Score=44.27 Aligned_cols=67 Identities=22% Similarity=0.243 Sum_probs=45.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.++++.|.| .|.||+.+++.+..-|++|++.+|+. .... ......+ ...+++++++++|+|++
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~----~~~~----~~~~~~~--------~~~~l~ell~~aDiv~~ 97 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP----KPEE----GADEFGV--------EYVSLDELLAQADIVSL 97 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC----HHHH----HHHHTTE--------EESSHHHHHHH-SEEEE
T ss_pred CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC----Chhh----hcccccc--------eeeehhhhcchhhhhhh
Confidence 468999998 59999999999999999999999998 1111 0111111 12346667777888888
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
+.+.
T Consensus 98 ~~pl 101 (178)
T PF02826_consen 98 HLPL 101 (178)
T ss_dssp -SSS
T ss_pred hhcc
Confidence 7763
No 445
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.55 E-value=0.00058 Score=47.68 Aligned_cols=33 Identities=15% Similarity=0.365 Sum_probs=30.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
++|.|.|+ |.+|..++..|++.|++|+++++++
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~ 37 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME 37 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence 57999985 9999999999999999999999886
No 446
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.55 E-value=0.0025 Score=44.78 Aligned_cols=73 Identities=22% Similarity=0.265 Sum_probs=46.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHh-cccCE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAV-KRVDV 78 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~ 78 (124)
.+++|+|++|.+|...++.+...|. +|+++++++ .+.+.+.. ..++..+ .|..+. +.+.++. .++|+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~-----~~~~~~~~--~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~ 227 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD-----EKCQLLKS--ELGFDAA-INYKTDNVAERLRELCPEGVDV 227 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH-----HHHHHHHH--hcCCcEE-EECCCCCHHHHHHHHCCCCceE
Confidence 6899999999999999988888898 799888876 22222221 1222221 222222 3333332 35899
Q ss_pred EEEeCc
Q 033236 79 VICTIS 84 (124)
Q Consensus 79 vi~~a~ 84 (124)
++.+.|
T Consensus 228 vid~~g 233 (345)
T cd08293 228 YFDNVG 233 (345)
T ss_pred EEECCC
Confidence 999887
No 447
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.54 E-value=0.0015 Score=44.92 Aligned_cols=74 Identities=22% Similarity=0.334 Sum_probs=49.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHH---HHHHhc--ccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRS---LVEAVK--RVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~--~~d 77 (124)
+++++|+|++|.+|..+++.+...|.+|+++++++ ...+.+..+ ++.. ..|..+++. +.+... ++|
T Consensus 145 g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d 215 (325)
T cd08253 145 GETVLVHGGSGAVGHAAVQLARWAGARVIATASSA-----EGAELVRQA---GADA-VFNYRAEDLADRILAATAGQGVD 215 (325)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHc---CCCE-EEeCCCcCHHHHHHHHcCCCceE
Confidence 56899999999999999999989999999988876 223333222 2221 133444333 333332 589
Q ss_pred EEEEeCcc
Q 033236 78 VVICTISG 85 (124)
Q Consensus 78 ~vi~~a~~ 85 (124)
.++++++.
T Consensus 216 ~vi~~~~~ 223 (325)
T cd08253 216 VIIEVLAN 223 (325)
T ss_pred EEEECCch
Confidence 99998873
No 448
>PLN02928 oxidoreductase family protein
Probab=97.54 E-value=0.00052 Score=48.85 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=50.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.++++.|.|. |.||+.+++.|..-|++|++.+|+.... ..... ..+......+........++.++++++|+|+.
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl 232 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSE---PEDGL-LIPNGDVDDLVDEKGGHEDIYEFAGEADIVVL 232 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChh---hhhhh-ccccccccccccccCcccCHHHHHhhCCEEEE
Confidence 4688999995 9999999999999999999998864110 00000 00011111111111145678899999999998
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
+.+.
T Consensus 233 ~lPl 236 (347)
T PLN02928 233 CCTL 236 (347)
T ss_pred CCCC
Confidence 8763
No 449
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.54 E-value=0.0028 Score=46.51 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=69.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhC-------CC--eEEEEeCCCCCCchHHHHHhhhhcc--CCeEEEEcccCChHHHHHH
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQ-------GH--ETYVLQRPDIGLDIDKLQMLLSFKK--QGAHLIEASFADHRSLVEA 72 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~ 72 (124)
-+|.|+|++|.+|.+++..|+.. +. ++..++++.+..+....+....... .++.+ ..+ + -+.
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~~--~----ye~ 173 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GID--P----YEV 173 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ecC--C----HHH
Confidence 37899999999999999999887 63 7888888875554444444433211 12211 121 2 356
Q ss_pred hcccCEEEEeCcccc--------ceecchHHHHHHHHHHHH-hCCccEEEEec
Q 033236 73 VKRVDVVICTISGVH--------FRSHNILMQLKLVDAIRE-AGNVKKRKLNE 116 (124)
Q Consensus 73 ~~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~i~~s 116 (124)
++++|+||..+|..+ ..+.|..-.+.+.+.+.+ .++-..+|.+|
T Consensus 174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 778999999998532 234567778888888888 45223444444
No 450
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.53 E-value=0.0017 Score=45.20 Aligned_cols=73 Identities=21% Similarity=0.298 Sum_probs=47.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh---HHHHHHh-cccCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH---RSLVEAV-KRVDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~-~~~d~ 78 (124)
+.+++|+||+|.+|..+++.+...|.+|+++++++ .+.+.+.. .++..+ .|..++ +.+.++. .++|+
T Consensus 144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~-----~~~~~l~~---~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~ 214 (329)
T cd08294 144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD-----DKVAWLKE---LGFDAV-FNYKTVSLEEALKEAAPDGIDC 214 (329)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHH---cCCCEE-EeCCCccHHHHHHHHCCCCcEE
Confidence 46899999999999999998888999999888876 33333332 222211 233322 2333332 25899
Q ss_pred EEEeCc
Q 033236 79 VICTIS 84 (124)
Q Consensus 79 vi~~a~ 84 (124)
++.+.|
T Consensus 215 vld~~g 220 (329)
T cd08294 215 YFDNVG 220 (329)
T ss_pred EEECCC
Confidence 999887
No 451
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.53 E-value=0.00072 Score=46.58 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=32.0
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCC----CeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQG----HETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g----~~v~~~~r~~ 37 (124)
|+.|++.+.| +|.+|.++++.|++.| ++|++.+|++
T Consensus 1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN 40 (279)
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence 7889999998 6999999999999987 7888888865
No 452
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.53 E-value=0.0011 Score=47.94 Aligned_cols=108 Identities=19% Similarity=0.155 Sum_probs=57.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhc----cCCeE-E---EEcccCChHHHHHHhcc
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFK----KQGAH-L---IEASFADHRSLVEAVKR 75 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~-~---~~~D~~~~~~~~~~~~~ 75 (124)
|+|.|.| .|++|..++..++ .|++|+++++++ .+.+.+..-. .+.++ . ..+.++...+...+.++
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~-----~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ 73 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILP-----SRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRD 73 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCH-----HHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcC
Confidence 4688998 5999999997666 599999999997 2222221100 00100 0 01111111223445578
Q ss_pred cCEEEEeCccc-cc--eecchHHHHHHHHHHHHhCCccEEEEecCCc
Q 033236 76 VDVVICTISGV-HF--RSHNILMQLKLVDAIREAGNVKKRKLNEGMI 119 (124)
Q Consensus 76 ~d~vi~~a~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~ss~~ 119 (124)
+|++|-+.+.. +. ...+......+++.+.+.. ...++...|+.
T Consensus 74 ad~vii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~-~g~lVV~~STv 119 (388)
T PRK15057 74 ADYVIIATPTDYDPKTNYFNTSSVESVIKDVVEIN-PYAVMVIKSTV 119 (388)
T ss_pred CCEEEEeCCCCCccCCCCcChHHHHHHHHHHHhcC-CCCEEEEeeec
Confidence 99999988743 11 1234445555555554433 23444444443
No 453
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.53 E-value=0.0014 Score=46.90 Aligned_cols=92 Identities=17% Similarity=0.185 Sum_probs=54.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhC-CCe---EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQ-GHE---TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVV 79 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~-g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 79 (124)
+++.|.||+|++|+.+++.++++ ..+ +..+..+.++ .....+.... ....+..+++. ++++|++
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg------~~~~~f~g~~--~~v~~~~~~~~----~~~~Div 69 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG------GAAPSFGGKE--GTLQDAFDIDA----LKKLDII 69 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC------CcccccCCCc--ceEEecCChhH----hcCCCEE
Confidence 68999999999999999966554 455 5554443211 1112222222 22233334443 3679999
Q ss_pred EEeCccccceecchHHHHHHHHHHHHhCCcc-EEEEec
Q 033236 80 ICTISGVHFRSHNILMQLKLVDAIREAGNVK-KRKLNE 116 (124)
Q Consensus 80 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~s 116 (124)
+.++| ......+...+.+.| .+ .+|-.|
T Consensus 70 f~a~~--------~~~s~~~~~~~~~aG-~~~~VID~S 98 (369)
T PRK06598 70 ITCQG--------GDYTNEVYPKLRAAG-WQGYWIDAA 98 (369)
T ss_pred EECCC--------HHHHHHHHHHHHhCC-CCeEEEECC
Confidence 99887 223566677776677 33 344444
No 454
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.52 E-value=0.00047 Score=51.68 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=31.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+++++|+|+ |++|++++..|++.|++|+++.|+.
T Consensus 379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~ 412 (529)
T PLN02520 379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY 412 (529)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 578999997 8999999999999999999988875
No 455
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.52 E-value=0.004 Score=44.88 Aligned_cols=92 Identities=17% Similarity=0.277 Sum_probs=62.7
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc---------
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK--------- 74 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------- 74 (124)
+++.|.| -|++|..++-.++++|++|+.++-++ ...+.+......+.+.| ..+.++++.+
T Consensus 10 ~~I~ViG-LGYVGLPlA~~fA~~G~~ViG~DIn~--------~~Vd~ln~G~~~i~e~~--~~~~v~~~v~~g~lraTtd 78 (436)
T COG0677 10 ATIGVIG-LGYVGLPLAAAFASAGFKVIGVDINQ--------KKVDKLNRGESYIEEPD--LDEVVKEAVESGKLRATTD 78 (436)
T ss_pred eEEEEEc-cccccHHHHHHHHHcCCceEeEeCCH--------HHHHHHhCCcceeecCc--HHHHHHHHHhcCCceEecC
Confidence 6788998 59999999999999999999999997 33434443433344333 3333444432
Q ss_pred -----ccCEEEEeCcc-c-cceecchHHHHHHHHHHHHh
Q 033236 75 -----RVDVVICTISG-V-HFRSHNILMQLKLVDAIREA 106 (124)
Q Consensus 75 -----~~d~vi~~a~~-~-~~~~~~~~~~~~~~~~~~~~ 106 (124)
.+|+.+.|.+. . .+.+++.....+.++...+.
T Consensus 79 ~~~l~~~dv~iI~VPTPl~~~~~pDls~v~~aa~sIa~~ 117 (436)
T COG0677 79 PEELKECDVFIICVPTPLKKYREPDLSYVESAARSIAPV 117 (436)
T ss_pred hhhcccCCEEEEEecCCcCCCCCCChHHHHHHHHHHHHh
Confidence 37988888752 2 34567777777777766654
No 456
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=97.52 E-value=0.0014 Score=45.88 Aligned_cols=78 Identities=14% Similarity=0.107 Sum_probs=48.8
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
.++.|.|++|+.|..+++.|.+.. .++..+.-++. .+ +.+..++++++|++|.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------------~~---~~~~~~~~~~~D~vFla 56 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------------KD---AAERAKLLNAADVAILC 56 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------------cC---cCCHhHhhcCCCEEEEC
Confidence 478999999999999999999886 56655543330 01 11233455678888777
Q ss_pred CccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 83 ISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.+. .....+++.+.+.+ .++|-.|
T Consensus 57 lp~--------~~s~~~~~~~~~~g--~~VIDlS 80 (310)
T TIGR01851 57 LPD--------DAAREAVSLVDNPN--TCIIDAS 80 (310)
T ss_pred CCH--------HHHHHHHHHHHhCC--CEEEECC
Confidence 651 22344555554455 3566555
No 457
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.52 E-value=0.00025 Score=48.91 Aligned_cols=36 Identities=28% Similarity=0.511 Sum_probs=32.7
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|+.+++.|.|+ |.+|..++..++..|++|+++++++
T Consensus 1 ~~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~ 36 (282)
T PRK05808 1 MGIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISD 36 (282)
T ss_pred CCccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCH
Confidence 56678999985 9999999999999999999999887
No 458
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.52 E-value=0.0015 Score=43.07 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=31.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.+++++|.|| |.+|...++.|++.|++|+++.+..
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 5789999996 9999999999999999999987653
No 459
>PRK07411 hypothetical protein; Validated
Probab=97.52 E-value=0.0036 Score=45.32 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=63.7
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
..+|+|.| +|++|..+++.|+..| -++++++.+.-+ ......+.+..+. .-+++.+...
T Consensus 38 ~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~ 116 (390)
T PRK07411 38 AASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETR 116 (390)
T ss_pred cCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecc
Confidence 45799998 5999999999999999 577777755210 1111122232222 2245666665
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN 115 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (124)
++ ++...+++++.|+|+.+... ...-..+-++|.+.+ ..+|+.
T Consensus 117 ~~-~~~~~~~~~~~D~Vvd~~d~-------~~~r~~ln~~~~~~~--~p~v~~ 159 (390)
T PRK07411 117 LS-SENALDILAPYDVVVDGTDN-------FPTRYLVNDACVLLN--KPNVYG 159 (390)
T ss_pred cC-HHhHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC--CCEEEE
Confidence 54 45667788999999998762 222334556777666 344443
No 460
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.51 E-value=0.003 Score=44.77 Aligned_cols=71 Identities=31% Similarity=0.436 Sum_probs=52.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeE-EEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAH-LIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++++|+|+ |++|...++.....|.+|++++|++ .+.+...+ .+.. ++... |++.+..+.+.+|+++.
T Consensus 167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~-----~K~e~a~~---lGAd~~i~~~--~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSE-----EKLELAKK---LGADHVINSS--DSDALEAVKEIADAIID 235 (339)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCCh-----HHHHHHHH---hCCcEEEEcC--CchhhHHhHhhCcEEEE
Confidence 568999997 5999999988888999999999998 33333333 2333 33332 66666666666999999
Q ss_pred eCc
Q 033236 82 TIS 84 (124)
Q Consensus 82 ~a~ 84 (124)
+++
T Consensus 236 tv~ 238 (339)
T COG1064 236 TVG 238 (339)
T ss_pred CCC
Confidence 988
No 461
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.51 E-value=0.00023 Score=49.49 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=30.1
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+++.+.| .|.+|..++..|++.|++|++.+|++
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~ 34 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNP 34 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 4788998 59999999999999999999999987
No 462
>PLN00203 glutamyl-tRNA reductase
Probab=97.50 E-value=0.00082 Score=50.21 Aligned_cols=73 Identities=23% Similarity=0.444 Sum_probs=50.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++++|.|+ |.+|..+++.|...|. +|+++.|+. .........+. +..+. +...+++..++.++|+||.
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~----era~~La~~~~--g~~i~---~~~~~dl~~al~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSE----ERVAALREEFP--DVEII---YKPLDEMLACAAEADVVFT 335 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCH----HHHHHHHHHhC--CCceE---eecHhhHHHHHhcCCEEEE
Confidence 578999997 9999999999999995 799999987 22222222221 22211 2233456677889999999
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
+.+.
T Consensus 336 AT~s 339 (519)
T PLN00203 336 STSS 339 (519)
T ss_pred ccCC
Confidence 8763
No 463
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.50 E-value=0.00056 Score=41.83 Aligned_cols=34 Identities=26% Similarity=0.488 Sum_probs=28.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEe-CCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQ-RPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~-r~~ 37 (124)
.+++.|+|+ |.+|.++++.|.+.|+.|..+. |++
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~ 44 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP 44 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence 468999996 9999999999999999998874 443
No 464
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=97.49 E-value=0.0034 Score=46.47 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=30.5
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.++.|.| .|-.|..++..|++.|++|.+.+|++
T Consensus 2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~ 34 (470)
T PTZ00142 2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRTY 34 (470)
T ss_pred CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4789998 59999999999999999999999987
No 465
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.49 E-value=0.0039 Score=42.13 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=66.1
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCC------------------CchHHHHHhhhhccCCeEEEE-cc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIG------------------LDIDKLQMLLSFKKQGAHLIE-AS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~D 62 (124)
..+++|.|. |++|++.++.|++.| -++++++.+.-. ..+...++...+ .+..++.. -|
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I-nP~c~V~~~~~ 107 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI-NPECEVTAIND 107 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh-CCCceEeehHh
Confidence 357899985 999999999999999 477777755310 000111112111 23444333 34
Q ss_pred cCChHHHHHHhc-ccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVK-RVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
.-.++.+..++. +.|+||-+.. ++..-..++..|.+++ . .+|-+.
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD-------~v~~Kv~Li~~c~~~k-i-~vIss~ 153 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAID-------SVRAKVALIAYCRRNK-I-PVISSM 153 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchh-------hhHHHHHHHHHHHHcC-C-CEEeec
Confidence 567888888876 4999998774 3555567888998887 3 444443
No 466
>PRK14851 hypothetical protein; Provisional
Probab=97.49 E-value=0.0026 Score=49.03 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=65.9
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
+.+|+|.| .|++|..++..|+..|. ++++++.+.-+ +.+...+.+..+. .-+++.+...
T Consensus 43 ~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~ 121 (679)
T PRK14851 43 EAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAG 121 (679)
T ss_pred cCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 56899998 59999999999999994 67777644200 1111112222222 3356777777
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEe
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLN 115 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (124)
++ ++.+..+++++|+||.+.... ....-..+.+.|.+.+ + .+|..
T Consensus 122 i~-~~n~~~~l~~~DvVid~~D~~-----~~~~r~~l~~~c~~~~-i-P~i~~ 166 (679)
T PRK14851 122 IN-ADNMDAFLDGVDVVLDGLDFF-----QFEIRRTLFNMAREKG-I-PVITA 166 (679)
T ss_pred CC-hHHHHHHHhCCCEEEECCCCC-----cHHHHHHHHHHHHHCC-C-CEEEe
Confidence 74 567888999999999777521 1222345667787776 3 34443
No 467
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=97.49 E-value=0.0013 Score=46.61 Aligned_cols=93 Identities=13% Similarity=0.142 Sum_probs=54.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC---CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG---HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
+.+++.|.||+|++|..+++.|.++. .++..+....+.- +... +....+.+- ++ +. ..++++|+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG-----~~~~-~~~~~~~v~--~~---~~--~~~~~~Dv 69 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAG-----ETLR-FGGKSVTVQ--DA---AE--FDWSQAQL 69 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCC-----ceEE-ECCcceEEE--eC---ch--hhccCCCE
Confidence 45789999999999999999999843 4665554433110 0000 111111111 22 11 22367899
Q ss_pred EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
+|.+++ ......+++.+.+.| .++|-.|+
T Consensus 70 vf~a~p--------~~~s~~~~~~~~~~g--~~VIDlS~ 98 (336)
T PRK08040 70 AFFVAG--------REASAAYAEEATNAG--CLVIDSSG 98 (336)
T ss_pred EEECCC--------HHHHHHHHHHHHHCC--CEEEECCh
Confidence 999887 223556666666666 35666654
No 468
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.49 E-value=0.0054 Score=41.28 Aligned_cols=70 Identities=21% Similarity=0.387 Sum_probs=43.0
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCC----eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGH----ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVD 77 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d 77 (124)
+.+++.|.| +|.+|.+++..|.+.+. ++++..|+. ..+.+.... ..++... .+..++++++|
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~----~~~~~~~~~--~~~~~~~-------~~~~~~~~~~D 68 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSN----VEKLDQLQA--RYNVSTT-------TDWKQHVTSVD 68 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCC----HHHHHHHHH--HcCcEEe-------CChHHHHhcCC
Confidence 367899998 59999999999988762 255666643 122222211 1122211 12344567899
Q ss_pred EEEEeCcc
Q 033236 78 VVICTISG 85 (124)
Q Consensus 78 ~vi~~a~~ 85 (124)
+|+.+..+
T Consensus 69 iViiavp~ 76 (245)
T PRK07634 69 TIVLAMPP 76 (245)
T ss_pred EEEEecCH
Confidence 99998874
No 469
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.49 E-value=0.00093 Score=47.56 Aligned_cols=74 Identities=24% Similarity=0.350 Sum_probs=49.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhc----ccCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVK----RVDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~d~ 78 (124)
++.++|.||+|++|++.++.....+...++..++. +..+..+.+. .-...|+.+++..+...+ ++|+
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~-----e~~~l~k~lG----Ad~vvdy~~~~~~e~~kk~~~~~~Dv 228 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK-----EKLELVKKLG----ADEVVDYKDENVVELIKKYTGKGVDV 228 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc-----chHHHHHHcC----CcEeecCCCHHHHHHHHhhcCCCccE
Confidence 56899999999999999999888884334444444 2223333322 133457777655555544 4999
Q ss_pred EEEeCcc
Q 033236 79 VICTISG 85 (124)
Q Consensus 79 vi~~a~~ 85 (124)
|+.|.|.
T Consensus 229 VlD~vg~ 235 (347)
T KOG1198|consen 229 VLDCVGG 235 (347)
T ss_pred EEECCCC
Confidence 9999985
No 470
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.48 E-value=0.0018 Score=44.65 Aligned_cols=33 Identities=30% Similarity=0.467 Sum_probs=30.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|+|.|.| .|.+|..++..|.+.|++|.+.+|++
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~ 33 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRE 33 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4788998 69999999999999999999999886
No 471
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.48 E-value=0.0033 Score=43.80 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=30.0
Q ss_pred ceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
|+|.+.| .|.+|..+++.|++.|++|.+.+|++
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~ 33 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNP 33 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4788998 59999999999999999999999986
No 472
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.48 E-value=0.00082 Score=49.03 Aligned_cols=72 Identities=25% Similarity=0.308 Sum_probs=49.9
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
.+++++|+|+ |.+|..+++.|...|. +|++..|++ .........+. . +..+.+++...+.++|+||
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~----~ra~~la~~~g---~-----~~~~~~~~~~~l~~aDvVI 247 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTL----ERAEELAEEFG---G-----EAIPLDELPEALAEADIVI 247 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCH----HHHHHHHHHcC---C-----cEeeHHHHHHHhccCCEEE
Confidence 3578999986 9999999999999895 889999986 12122222211 1 2223356677778899999
Q ss_pred EeCccc
Q 033236 81 CTISGV 86 (124)
Q Consensus 81 ~~a~~~ 86 (124)
.+.+..
T Consensus 248 ~aT~s~ 253 (423)
T PRK00045 248 SSTGAP 253 (423)
T ss_pred ECCCCC
Confidence 988743
No 473
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.48 E-value=0.0023 Score=47.74 Aligned_cols=74 Identities=27% Similarity=0.393 Sum_probs=50.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCCh-------------H--
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADH-------------R-- 67 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~-- 67 (124)
+.+++|+|+ |.+|...+..+...|.+|+++++++ .+.+..+. .+.+++..|..+. +
T Consensus 165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~-----~rle~aes---lGA~~v~i~~~e~~~~~~gya~~~s~~~~ 235 (509)
T PRK09424 165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRP-----EVAEQVES---MGAEFLELDFEEEGGSGDGYAKVMSEEFI 235 (509)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHH---cCCeEEEeccccccccccchhhhcchhHH
Confidence 468999995 9999999999999999999999987 33444333 3445444333221 1
Q ss_pred -H----HHHHhcccCEEEEeCcc
Q 033236 68 -S----LVEAVKRVDVVICTISG 85 (124)
Q Consensus 68 -~----~~~~~~~~d~vi~~a~~ 85 (124)
. +.+..+++|++|.+++.
T Consensus 236 ~~~~~~~~~~~~gaDVVIetag~ 258 (509)
T PRK09424 236 KAEMALFAEQAKEVDIIITTALI 258 (509)
T ss_pred HHHHHHHHhccCCCCEEEECCCC
Confidence 1 12223469999999984
No 474
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.48 E-value=0.00068 Score=49.37 Aligned_cols=71 Identities=20% Similarity=0.323 Sum_probs=50.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
+++++|+|+ |.+|..+++.|...| .+|++.+|++ .........+. ...+ +.+++.+++.++|+||.
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~----~ra~~la~~~g---~~~i-----~~~~l~~~l~~aDvVi~ 246 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTY----ERAEDLAKELG---GEAV-----KFEDLEEYLAEADIVIS 246 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCH----HHHHHHHHHcC---CeEe-----eHHHHHHHHhhCCEEEE
Confidence 578999996 999999999999999 7899999986 22122222211 1222 23467777888999999
Q ss_pred eCccc
Q 033236 82 TISGV 86 (124)
Q Consensus 82 ~a~~~ 86 (124)
+.+..
T Consensus 247 aT~s~ 251 (417)
T TIGR01035 247 STGAP 251 (417)
T ss_pred CCCCC
Confidence 87643
No 475
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.46 E-value=0.003 Score=44.12 Aligned_cols=69 Identities=26% Similarity=0.260 Sum_probs=45.2
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC--eEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH--ETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
.+++.|.| .|.+|..++..|.+.|+ +|++.+|++ ...+.... .++.... ..+..++++++|+||
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~-----~~~~~a~~---~g~~~~~-----~~~~~~~~~~aDvVi 71 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSA-----ETRARARE---LGLGDRV-----TTSAAEAVKGADLVI 71 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCH-----HHHHHHHh---CCCCcee-----cCCHHHHhcCCCEEE
Confidence 46899998 69999999999999884 889899886 22222211 1211000 112344567889998
Q ss_pred EeCcc
Q 033236 81 CTISG 85 (124)
Q Consensus 81 ~~a~~ 85 (124)
.+.++
T Consensus 72 iavp~ 76 (307)
T PRK07502 72 LCVPV 76 (307)
T ss_pred ECCCH
Confidence 88864
No 476
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=97.46 E-value=0.0008 Score=47.82 Aligned_cols=68 Identities=25% Similarity=0.357 Sum_probs=54.6
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
++++.|.|+ |.+|+=++.+-.+.|+++++++-++..++..- .-..+.++..|++.++++.+++|+|-.
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v----------a~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV----------ADRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc----------ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence 378999996 99999999999999999999998774332111 114778888899999999999998865
No 477
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=97.45 E-value=0.006 Score=46.32 Aligned_cols=97 Identities=20% Similarity=0.245 Sum_probs=68.3
Q ss_pred ceEEEEccCChhcHHHHHHHhhCC-CeEEEEeCCCCCCchH----HHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236 4 SKVLVVGGTGYIGRRIVKASLAQG-HETYVLQRPDIGLDID----KLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 4 ~~ili~Ga~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
.+|+|.| .|+.|.+++..|++.| .++.+++-+....... ..+.... .++++.+...|.++.+++...+++.|.
T Consensus 130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~-~n~~v~v~~i~~~~~~dl~ev~~~~Di 207 (637)
T TIGR03693 130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEE-TDDALLVQEIDFAEDQHLHEAFEPADW 207 (637)
T ss_pred ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHH-hCCCCceEeccCCcchhHHHhhcCCcE
Confidence 4799998 5999999999999999 5776765443211111 1111111 245666666677889999999999999
Q ss_pred EEEeCccccceecchHHHHHHHHHHHHhC
Q 033236 79 VICTISGVHFRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~ 107 (124)
|++.+. +.+......+-++|.+.|
T Consensus 208 Vi~vsD-----dy~~~~Lr~lN~acvkeg 231 (637)
T TIGR03693 208 VLYVSD-----NGDIDDLHALHAFCKEEG 231 (637)
T ss_pred EEEECC-----CCChHHHHHHHHHHHHcC
Confidence 999887 344555677778888877
No 478
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.45 E-value=0.0011 Score=46.71 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=30.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+|+|.|.| +|.+|..++..|.+.|++|++++|++
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecHH
Confidence 47899998 49999999999999999999999864
No 479
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.42 E-value=0.0043 Score=42.32 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=29.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCC-CeE-EEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQG-HET-YVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g-~~v-~~~~r~~ 37 (124)
+++++.|.|++|-.|+.+++.+.+.+ .++ -+++|.+
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~ 38 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG 38 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence 35789999999999999999998875 665 4456665
No 480
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.41 E-value=0.00036 Score=45.12 Aligned_cols=33 Identities=33% Similarity=0.453 Sum_probs=28.8
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDI 38 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~ 38 (124)
++.|.|+ |..|+.++..++..|++|++.+++++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence 5789996 99999999999999999999999873
No 481
>PRK14852 hypothetical protein; Provisional
Probab=97.41 E-value=0.0039 Score=49.65 Aligned_cols=105 Identities=14% Similarity=0.094 Sum_probs=66.5
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCC-eEEEEeCCCCC------------------CchHHHHHhhhhc-cCCeEEEEcc
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGH-ETYVLQRPDIG------------------LDIDKLQMLLSFK-KQGAHLIEAS 62 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~-~v~~~~r~~~~------------------~~~~~~~~~~~~~-~~~~~~~~~D 62 (124)
+.+|+|.| .|++|..++..|+..|. ++++++.+.-+ ......+.+..+. .-+++.+...
T Consensus 332 ~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~ 410 (989)
T PRK14852 332 RSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEG 410 (989)
T ss_pred cCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecC
Confidence 46799998 59999999999999994 66776654200 1111122232222 2346666665
Q ss_pred cCChHHHHHHhcccCEEEEeCccccceecchHHHHHHHHHHHHhCCccEEEEec
Q 033236 63 FADHRSLVEAVKRVDVVICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNE 116 (124)
Q Consensus 63 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s 116 (124)
+ +++.+..+++++|+||.+.... ....-..+.+.|.+.+ + .+|..+
T Consensus 411 I-~~en~~~fl~~~DiVVDa~D~~-----~~~~rr~l~~~c~~~~-I-P~I~ag 456 (989)
T PRK14852 411 V-AAETIDAFLKDVDLLVDGIDFF-----ALDIRRRLFNRALELG-I-PVITAG 456 (989)
T ss_pred C-CHHHHHHHhhCCCEEEECCCCc-----cHHHHHHHHHHHHHcC-C-CEEEee
Confidence 5 5677888999999999877532 2223356667777777 3 455444
No 482
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.40 E-value=0.001 Score=48.52 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=31.8
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.+++++|+|. |.+|+.+++.+...|.+|++.++++
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp 245 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDP 245 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCc
Confidence 4688999995 9999999999999999999999887
No 483
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.40 E-value=0.0025 Score=46.70 Aligned_cols=75 Identities=13% Similarity=0.085 Sum_probs=50.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
++++++|+|. |..|..+++.|.++|++|.+.+..+.... ...++.. ..++.+..+... + ...++.|.||.
T Consensus 4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~---~~~l~~~-~~gi~~~~g~~~--~---~~~~~~d~vv~ 73 (445)
T PRK04308 4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPER---VAQIGKM-FDGLVFYTGRLK--D---ALDNGFDILAL 73 (445)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchh---HHHHhhc-cCCcEEEeCCCC--H---HHHhCCCEEEE
Confidence 4678999997 78999999999999999999987663211 1112110 135666655432 1 13357899999
Q ss_pred eCccc
Q 033236 82 TISGV 86 (124)
Q Consensus 82 ~a~~~ 86 (124)
..|..
T Consensus 74 spgi~ 78 (445)
T PRK04308 74 SPGIS 78 (445)
T ss_pred CCCCC
Confidence 88743
No 484
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.40 E-value=0.0006 Score=39.23 Aligned_cols=69 Identities=28% Similarity=0.458 Sum_probs=44.5
Q ss_pred eEEEEccCChhcHHHHHHHhhCC---CeEEEE-eCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQG---HETYVL-QRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
|+.+.| +|.+|.++++.|.+.| ++|.+. .|++ ++...... .-++.+... +..++.+..|+||
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~-----~~~~~~~~--~~~~~~~~~------~~~~~~~~advvi 66 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSP-----EKAAELAK--EYGVQATAD------DNEEAAQEADVVI 66 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSH-----HHHHHHHH--HCTTEEESE------EHHHHHHHTSEEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcH-----HHHHHHHH--hhccccccC------ChHHhhccCCEEE
Confidence 567786 6999999999999999 999865 8887 32222211 122233322 2445556899999
Q ss_pred EeCcccc
Q 033236 81 CTISGVH 87 (124)
Q Consensus 81 ~~a~~~~ 87 (124)
.+..|..
T Consensus 67 lav~p~~ 73 (96)
T PF03807_consen 67 LAVKPQQ 73 (96)
T ss_dssp E-S-GGG
T ss_pred EEECHHH
Confidence 9998644
No 485
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.39 E-value=0.00033 Score=48.46 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=28.7
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+|.|.| .|.+|..++..|++.|++|++.+|++
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~ 32 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGP 32 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 367887 59999999999999999999999886
No 486
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.38 E-value=0.00097 Score=46.47 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=32.7
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.+|++.+.|.+|-+|+.++..|.++|+.|++..+..
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 578999999999999999999999999999986654
No 487
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.38 E-value=0.002 Score=35.87 Aligned_cols=34 Identities=35% Similarity=0.664 Sum_probs=30.3
Q ss_pred eEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCC
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIG 39 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~ 39 (124)
+++|.|| |.+|..++..|.+.|.+|+++.|++.-
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5788885 999999999999999999999998743
No 488
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.38 E-value=0.0013 Score=46.21 Aligned_cols=66 Identities=15% Similarity=0.273 Sum_probs=48.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.++++.|.| .|.||+.+++.|..-|++|++.+|.+... ..+... ...+++.++++++|+|+.
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~-------------~~~~~~----~~~~~l~e~l~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW-------------PGVQSF----AGREELSAFLSQTRVLIN 196 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------CCceee----cccccHHHHHhcCCEEEE
Confidence 467899998 59999999999999999999998865110 111111 134567888888888888
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
+.+.
T Consensus 197 ~lPl 200 (312)
T PRK15469 197 LLPN 200 (312)
T ss_pred CCCC
Confidence 7763
No 489
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.38 E-value=0.0028 Score=44.51 Aligned_cols=75 Identities=27% Similarity=0.251 Sum_probs=54.5
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.++++.|+|+.| +|.--++.-...|++|++++++. ..+.+.. +..+.+++..-..|++.++++.+..|.+++
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~----~kkeea~---~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~ 252 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSS----KKKEEAI---KSLGADVFVDSTEDPDIMKAIMKTTDGGID 252 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCc----hhHHHHH---HhcCcceeEEecCCHHHHHHHHHhhcCcce
Confidence 367899999866 99877777777899999999987 2333333 345666666555588888888877776666
Q ss_pred eCc
Q 033236 82 TIS 84 (124)
Q Consensus 82 ~a~ 84 (124)
++.
T Consensus 253 ~v~ 255 (360)
T KOG0023|consen 253 TVS 255 (360)
T ss_pred eee
Confidence 654
No 490
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=97.38 E-value=0.0028 Score=38.20 Aligned_cols=30 Identities=33% Similarity=0.644 Sum_probs=25.6
Q ss_pred eEEEEccCChhcHHHHHHHhhC-CCeEEEEe
Q 033236 5 KVLVVGGTGYIGRRIVKASLAQ-GHETYVLQ 34 (124)
Q Consensus 5 ~ili~Ga~g~iG~~l~~~l~~~-g~~v~~~~ 34 (124)
++.|+|++|.+|..+++.+.+. +.++..+.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~ 31 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALA 31 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEE
Confidence 4789999999999999999884 78887773
No 491
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.37 E-value=0.0055 Score=43.65 Aligned_cols=92 Identities=22% Similarity=0.272 Sum_probs=53.8
Q ss_pred CceEEEEccCChhcHHHHHHHhh-CCCe---EEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLA-QGHE---TYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~-~g~~---v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~ 78 (124)
.+++.|.||+|++|+.+++.|.+ ...+ +..+....+.- +.. .+....+.+... +++. ++++|+
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saG-----k~~-~~~~~~l~v~~~---~~~~----~~~~Di 71 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAG-----KTV-QFKGREIIIQEA---KINS----FEGVDI 71 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCC-----CCe-eeCCcceEEEeC---CHHH----hcCCCE
Confidence 35899999999999999999985 4555 55554332111 001 222222333333 3333 367999
Q ss_pred EEEeCccccceecchHHHHHHHHHHHHhCCccEEEEecC
Q 033236 79 VICTISGVHFRSHNILMQLKLVDAIREAGNVKKRKLNEG 117 (124)
Q Consensus 79 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ss 117 (124)
++.+++. .....+...+.+.| ..+|-.|+
T Consensus 72 vf~a~~~--------~~s~~~~~~~~~~G--~~VID~Ss 100 (347)
T PRK06728 72 AFFSAGG--------EVSRQFVNQAVSSG--AIVIDNTS 100 (347)
T ss_pred EEECCCh--------HHHHHHHHHHHHCC--CEEEECch
Confidence 9998862 23455666666666 35555553
No 492
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=97.37 E-value=0.0015 Score=49.43 Aligned_cols=71 Identities=28% Similarity=0.384 Sum_probs=53.9
Q ss_pred CCCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEE
Q 033236 1 MGKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVI 80 (124)
Q Consensus 1 m~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 80 (124)
|++|++.|.|+ |.+|+-++++..+.|++|++++.++..+.. . . .-+.+.+|..|.+.+.++.+++|++.
T Consensus 20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~---~-~------AD~~~v~~~~D~~~l~~~a~~~dvIt 88 (577)
T PLN02948 20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPAS---S-V------AARHVVGSFDDRAAVREFAKRCDVLT 88 (577)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh---h-h------CceeeeCCCCCHHHHHHHHHHCCEEE
Confidence 45688999996 899999999999999999999887632210 0 0 11355688899999988888888875
Q ss_pred Ee
Q 033236 81 CT 82 (124)
Q Consensus 81 ~~ 82 (124)
..
T Consensus 89 ~e 90 (577)
T PLN02948 89 VE 90 (577)
T ss_pred Ee
Confidence 54
No 493
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.37 E-value=0.0026 Score=44.74 Aligned_cols=75 Identities=19% Similarity=0.349 Sum_probs=53.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEE-----cccCChHHHHHHhcccC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIE-----ASFADHRSLVEAVKRVD 77 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~d 77 (124)
+++|.|.|+ |.=|.+++..|+++|++|++-.|++ +...+.... ..+..+.+ .++.-..++.++.+++|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~----~~~~~i~~~--~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad 73 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDE----EIVAEINET--RENPKYLPGILLPPNLKATTDLAEALDGAD 73 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCH----HHHHHHHhc--CcCccccCCccCCcccccccCHHHHHhcCC
Confidence 368999996 7779999999999999999999997 222221111 22333333 23333467888999999
Q ss_pred EEEEeCc
Q 033236 78 VVICTIS 84 (124)
Q Consensus 78 ~vi~~a~ 84 (124)
+|+...+
T Consensus 74 ~iv~avP 80 (329)
T COG0240 74 IIVIAVP 80 (329)
T ss_pred EEEEECC
Confidence 9888776
No 494
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.37 E-value=0.004 Score=44.17 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=30.8
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+.+++|+|++|.+|...++.+...|.+|+++++++
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~ 193 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 193 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 46899999999999999988888899988887765
No 495
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.36 E-value=0.0019 Score=47.74 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=50.6
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.+++++|.|+ |.+|..+++.|.+.|++|+++++++... .......+...++++..++-.+ ...++|.||.
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~---~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~ 84 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDER---HRALAAILEALGATVRLGPGPT------LPEDTDLVVT 84 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh---hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEE
Confidence 3568999996 9999999999999999999998765211 1111223345577776654322 3356898888
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
..|.
T Consensus 85 s~Gi 88 (480)
T PRK01438 85 SPGW 88 (480)
T ss_pred CCCc
Confidence 7774
No 496
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.35 E-value=0.0057 Score=42.72 Aligned_cols=95 Identities=16% Similarity=0.286 Sum_probs=59.8
Q ss_pred EEEEccCChhcHHHHHHHhhCC--CeEEEEeCCCCCCchHHHHHhhhhcc-CCeEEEEcccCChHHHHHHhcccCEEEEe
Q 033236 6 VLVVGGTGYIGRRIVKASLAQG--HETYVLQRPDIGLDIDKLQMLLSFKK-QGAHLIEASFADHRSLVEAVKRVDVVICT 82 (124)
Q Consensus 6 ili~Ga~g~iG~~l~~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~vi~~ 82 (124)
+.|.|+ |++|..++..|+..| .++.+++++.........+....... ....+..+ .+ .+.++++|+||.+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit 73 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence 357885 899999999999988 68999999873322222222211111 11222221 12 2478889999999
Q ss_pred Ccccc--------ceecchHHHHHHHHHHHHhC
Q 033236 83 ISGVH--------FRSHNILMQLKLVDAIREAG 107 (124)
Q Consensus 83 a~~~~--------~~~~~~~~~~~~~~~~~~~~ 107 (124)
+|... ....|..-.+.+.+.+.+.+
T Consensus 74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~ 106 (300)
T cd00300 74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYG 106 (300)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98432 12346666777888888776
No 497
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.35 E-value=0.0012 Score=48.89 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=31.2
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
.+++++|+|+ |++|++++..|.+.|++|.+..|+.
T Consensus 331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~ 365 (477)
T PRK09310 331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTK 365 (477)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4678999995 8999999999999999999888875
No 498
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.35 E-value=0.0019 Score=41.09 Aligned_cols=67 Identities=25% Similarity=0.411 Sum_probs=41.4
Q ss_pred CCceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHHhcccCEEEE
Q 033236 2 GKSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEAVKRVDVVIC 81 (124)
Q Consensus 2 ~~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 81 (124)
.+|+++|.|= |.+|+.+++.|...|.+|++...+| ....+.. -.+++.. .+.++....|++|.
T Consensus 22 ~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DP----i~alqA~----~dGf~v~--------~~~~a~~~adi~vt 84 (162)
T PF00670_consen 22 AGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDP----IRALQAA----MDGFEVM--------TLEEALRDADIFVT 84 (162)
T ss_dssp TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSH----HHHHHHH----HTT-EEE---------HHHHTTT-SEEEE
T ss_pred CCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECCh----HHHHHhh----hcCcEec--------CHHHHHhhCCEEEE
Confidence 4688999985 9999999999999999999999987 2222211 1233322 24556666777766
Q ss_pred eCcc
Q 033236 82 TISG 85 (124)
Q Consensus 82 ~a~~ 85 (124)
+.|.
T Consensus 85 aTG~ 88 (162)
T PF00670_consen 85 ATGN 88 (162)
T ss_dssp -SSS
T ss_pred CCCC
Confidence 6664
No 499
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.34 E-value=0.0054 Score=42.71 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=31.0
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCC
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPD 37 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~ 37 (124)
+.+++|.|++|.+|..+++.+...|.+|+++++++
T Consensus 140 ~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~ 174 (329)
T cd08250 140 GETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD 174 (329)
T ss_pred CCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcH
Confidence 46799999999999999988888899998888876
No 500
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.33 E-value=0.0037 Score=41.91 Aligned_cols=73 Identities=27% Similarity=0.370 Sum_probs=46.4
Q ss_pred CceEEEEccCChhcHHHHHHHhhCCCeEEEEeCCCCCCchHHHHHhhhhccCCeEEEEcccCChHHHHHH----hcccCE
Q 033236 3 KSKVLVVGGTGYIGRRIVKASLAQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLIEASFADHRSLVEA----VKRVDV 78 (124)
Q Consensus 3 ~~~ili~Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~d~ 78 (124)
+.+++|+|+++ +|..+++.+...|.+|+++++++ ...+.+.... ... ..|..+.+....+ -.++|.
T Consensus 135 ~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~-----~~~~~~~~~g---~~~-~~~~~~~~~~~~~~~~~~~~~d~ 204 (271)
T cd05188 135 GDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSD-----EKLELAKELG---ADH-VIDYKEEDLEEELRLTGGGGADV 204 (271)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCH-----HHHHHHHHhC---Cce-eccCCcCCHHHHHHHhcCCCCCE
Confidence 46799999988 99999998888999999998876 2223232221 111 1233333222222 235899
Q ss_pred EEEeCcc
Q 033236 79 VICTISG 85 (124)
Q Consensus 79 vi~~a~~ 85 (124)
++++++.
T Consensus 205 vi~~~~~ 211 (271)
T cd05188 205 VIDAVGG 211 (271)
T ss_pred EEECCCC
Confidence 9998873
Done!