Your job contains 1 sequence.
>033241
MASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQ
GAKMLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLI
EVRF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033241
(124 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2166811 - symbol:PFD5 "prefoldin 5" species:37... 508 1.1e-48 1
UNIPROTKB|E2RC92 - symbol:PFDN5 "Uncharacterized protein"... 237 5.7e-20 1
ZFIN|ZDB-GENE-030131-6858 - symbol:pfdn5 "prefoldin 5" sp... 231 2.5e-19 1
UNIPROTKB|Q8HYI9 - symbol:PFDN5 "Prefoldin subunit 5" spe... 229 4.0e-19 1
UNIPROTKB|Q99471 - symbol:PFDN5 "Prefoldin subunit 5" spe... 229 4.0e-19 1
UNIPROTKB|F1SFR2 - symbol:PFDN5 "Uncharacterized protein"... 229 4.0e-19 1
MGI|MGI:1928753 - symbol:Pfdn5 "prefoldin 5" species:1009... 229 4.0e-19 1
RGD|1311436 - symbol:Pfdn5 "prefoldin subunit 5" species:... 229 4.0e-19 1
DICTYBASE|DDB_G0280607 - symbol:pfdn5 "prefoldin subunit ... 215 1.2e-17 1
FB|FBgn0038976 - symbol:CG7048 species:7227 "Drosophila m... 208 6.7e-17 1
POMBASE|SPBC215.02 - symbol:bob1 "prefoldin subunit 5 (pr... 190 5.4e-15 1
SGD|S000004559 - symbol:GIM5 "Subunit of the heterohexame... 187 1.1e-14 1
UNIPROTKB|H3BPF6 - symbol:PFDN5 "Prefoldin subunit 5" spe... 186 1.4e-14 1
ASPGD|ASPL0000060607 - symbol:AN1205 species:162425 "Emer... 184 2.3e-14 1
WB|WBGene00020112 - symbol:pfd-5 species:6239 "Caenorhabd... 184 2.3e-14 1
CGD|CAL0001602 - symbol:GIM5 species:5476 "Candida albica... 166 1.9e-12 1
UNIPROTKB|H9L0Y4 - symbol:LOC100859376 "Uncharacterized p... 162 5.0e-12 1
UNIPROTKB|E2RC90 - symbol:PFDN5 "Uncharacterized protein"... 145 3.2e-10 1
UNIPROTKB|E2QZY7 - symbol:E2QZY7 "Uncharacterized protein... 125 4.2e-08 1
UNIPROTKB|K7GLH6 - symbol:LOC100522472 "Uncharacterized p... 86 0.00057 1
>TAIR|locus:2166811 [details] [associations]
symbol:PFD5 "prefoldin 5" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006457
"protein folding" evidence=IEA;ISS] [GO:0016272 "prefoldin complex"
evidence=IEA;ISS] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR004127 InterPro:IPR011599 InterPro:IPR027236
Pfam:PF02996 GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006457 GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
EMBL:AB007648 EMBL:AY063957 EMBL:AY096400 IPI:IPI00526333
RefSeq:NP_197720.1 UniGene:At.27128 UniGene:At.8807
ProteinModelPortal:P57742 STRING:P57742 PaxDb:P57742 PRIDE:P57742
ProMEX:P57742 DNASU:832393 EnsemblPlants:AT5G23290.1 GeneID:832393
KEGG:ath:AT5G23290 TAIR:At5g23290 eggNOG:COG1730
HOGENOM:HOG000207562 InParanoid:P57742 KO:K04797 OMA:KDYFKRR
PhylomeDB:P57742 ProtClustDB:CLSN2686132 Genevestigator:P57742
GermOnline:AT5G23290 PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293
Uniprot:P57742
Length = 151
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 101/123 (82%), Positives = 112/123 (91%)
Query: 1 MASSKGGG-MEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRP 59
MASS G MEKM ++QLKA+KEQ DLEVNLLQDSLNNIRTAT RL++A+ AL+DLSLRP
Sbjct: 1 MASSSSRGEMEKMGIDQLKALKEQADLEVNLLQDSLNNIRTATVRLDAAAAALNDLSLRP 60
Query: 60 QGAKMLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
QG KMLVPLTASLYVPGTLD+A KVLVDIGTGYF+EKTMD+GKDYC+RKINLLKSNFDQL
Sbjct: 61 QGKKMLVPLTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQL 120
Query: 120 IEV 122
EV
Sbjct: 121 FEV 123
>UNIPROTKB|E2RC92 [details] [associations]
symbol:PFDN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 HAMAP:MF_00308
GO:GO:0045892 GO:GO:0006457 GO:GO:0060041 GO:GO:0090090
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579 KO:K04797
OMA:KDYFKRR PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293 CTD:5204
GeneTree:ENSGT00390000008783 EMBL:AAEX03014986
RefSeq:NP_001238878.1 UniGene:Cfa.729 Ensembl:ENSCAFT00000011241
GeneID:607260 KEGG:cfa:607260 NextBio:20892998 Uniprot:E2RC92
Length = 154
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 43/109 (39%), Positives = 71/109 (65%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTA 70
++++ QL+ +K Q D EV L S+ ++ ++ A LH L+ +G ++LVPLT+
Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLHVLNKNNEGKELLVPLTS 68
Query: 71 SLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 69 SMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117
>ZFIN|ZDB-GENE-030131-6858 [details] [associations]
symbol:pfdn5 "prefoldin 5" species:7955 "Danio
rerio" [GO:0016272 "prefoldin complex" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 ZFIN:ZDB-GENE-030131-6858
GO:GO:0006457 GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293 HOVERGEN:HBG004539
EMBL:BC079502 IPI:IPI00734880 UniGene:Dr.5620
ProteinModelPortal:Q6AXK2 STRING:Q6AXK2 PRIDE:Q6AXK2
InParanoid:Q6AXK2 ArrayExpress:Q6AXK2 Bgee:Q6AXK2 Uniprot:Q6AXK2
Length = 153
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 43/111 (38%), Positives = 72/111 (64%)
Query: 9 MEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPL 68
+ ++S+ QL+ +K Q D E L S+ ++ ++ A +L+ L+ +G ++LVPL
Sbjct: 5 LTELSLPQLEGLKTQLDQETEFLSSSIAQLKVVQTKYVEAKDSLNVLNKSNEGKELLVPL 64
Query: 69 TASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
T+S+YVPG L D VLVD+GTGYFVEK +++GK++ +RKI L +++
Sbjct: 65 TSSMYVPGKLHDVDHVLVDVGTGYFVEKNVEDGKEFFKRKIGFLTKQIEKI 115
>UNIPROTKB|Q8HYI9 [details] [associations]
symbol:PFDN5 "Prefoldin subunit 5" species:9913 "Bos
taurus" [GO:0051086 "chaperone mediated protein folding independent
of cofactor" evidence=TAS] [GO:0006457 "protein folding"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005634
"nucleus" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0016272
"prefoldin complex" evidence=IEA] Reactome:REACT_17056
InterPro:IPR004127 InterPro:IPR011599 InterPro:IPR027236
Pfam:PF02996 GO:GO:0005829 GO:GO:0005634 GO:GO:0045892
GO:GO:0060041 Reactome:REACT_103209 GO:GO:0051086 GO:GO:0090090
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:COG1730
HOGENOM:HOG000207562 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 EMBL:AF520958 EMBL:BC102252 IPI:IPI00711559
RefSeq:NP_777157.1 UniGene:Bt.1430 ProteinModelPortal:Q8HYI9
STRING:Q8HYI9 PRIDE:Q8HYI9 Ensembl:ENSBTAT00000011762 GeneID:282848
KEGG:bta:282848 CTD:5204 GeneTree:ENSGT00390000008783
HOVERGEN:HBG004539 InParanoid:Q8HYI9 OrthoDB:EOG415GFQ
NextBio:20806379 Uniprot:Q8HYI9
Length = 154
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/109 (38%), Positives = 70/109 (64%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTA 70
++++ QL+ +K Q D EV L S+ ++ ++ A L+ L +G ++LVPLT+
Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLKKNNEGKELLVPLTS 68
Query: 71 SLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 69 SMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117
>UNIPROTKB|Q99471 [details] [associations]
symbol:PFDN5 "Prefoldin subunit 5" species:9606 "Homo
sapiens" [GO:0016272 "prefoldin complex" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006457 "protein folding" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IMP] Reactome:REACT_17015 InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 EMBL:AC073611
EMBL:CH471054 GO:GO:0060041 GO:GO:0051084 GO:GO:0090090
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:COG1730
HOGENOM:HOG000207562 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 CTD:5204 HOVERGEN:HBG004539 OrthoDB:EOG415GFQ
EMBL:D89667 EMBL:AB055802 EMBL:AB055803 EMBL:AB055804 EMBL:AB055805
EMBL:BT007195 EMBL:AK292623 EMBL:BC003373 EMBL:BC062671
IPI:IPI00015361 IPI:IPI00028183 IPI:IPI00030303 RefSeq:NP_002615.2
RefSeq:NP_665904.1 UniGene:Hs.655327 ProteinModelPortal:Q99471
SMR:Q99471 DIP:DIP-28155N IntAct:Q99471 STRING:Q99471
PhosphoSite:Q99471 DMDM:12231038 OGP:Q99471 PaxDb:Q99471
PeptideAtlas:Q99471 PRIDE:Q99471 DNASU:5204 Ensembl:ENST00000243040
Ensembl:ENST00000334478 Ensembl:ENST00000351500
Ensembl:ENST00000551018 GeneID:5204 KEGG:hsa:5204 UCSC:uc001scl.3
GeneCards:GC12P053689 HGNC:HGNC:8869 HPA:HPA008587 MIM:604899
neXtProt:NX_Q99471 PharmGKB:PA33210 InParanoid:Q99471
PhylomeDB:Q99471 ChiTaRS:PFDN5 GenomeRNAi:5204 NextBio:20126
ArrayExpress:Q99471 Bgee:Q99471 CleanEx:HS_PFDN5
Genevestigator:Q99471 GermOnline:ENSG00000123349 Uniprot:Q99471
Length = 154
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/109 (38%), Positives = 71/109 (65%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTA 70
++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+
Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTS 68
Query: 71 SLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 69 SMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117
>UNIPROTKB|F1SFR2 [details] [associations]
symbol:PFDN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] [GO:0016272 "prefoldin complex"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR004127 InterPro:IPR011599 InterPro:IPR027236
Pfam:PF02996 HAMAP:MF_00308 GO:GO:0045892 GO:GO:0006457
GO:GO:0060041 GO:GO:0090090 GO:GO:0016272 InterPro:IPR009053
SUPFAM:SSF46579 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 GeneTree:ENSGT00390000008783 EMBL:CU570852
Ensembl:ENSSSCT00000000285 Uniprot:F1SFR2
Length = 160
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/109 (38%), Positives = 71/109 (65%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTA 70
++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+
Sbjct: 15 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTS 74
Query: 71 SLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 75 SMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 123
>MGI|MGI:1928753 [details] [associations]
symbol:Pfdn5 "prefoldin 5" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 MGI:MGI:1928753
GO:GO:0005634 GO:GO:0045892 GO:GO:0006457 GO:GO:0060041
GO:GO:0090090 GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
eggNOG:COG1730 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 CTD:5204 GeneTree:ENSGT00390000008783
HOVERGEN:HBG004539 OrthoDB:EOG415GFQ EMBL:AF108357 EMBL:AB011473
EMBL:AK028206 EMBL:AK145883 EMBL:BC026920 IPI:IPI00480275
RefSeq:NP_081320.2 UniGene:Mm.158264 ProteinModelPortal:Q9WU28
SMR:Q9WU28 STRING:Q9WU28 PhosphoSite:Q9WU28 UCD-2DPAGE:Q9WU28
PaxDb:Q9WU28 PRIDE:Q9WU28 DNASU:56612 Ensembl:ENSMUST00000166658
GeneID:56612 KEGG:mmu:56612 InParanoid:Q9WU28 NextBio:313031
Bgee:Q9WU28 CleanEx:MM_PFDN5 Genevestigator:Q9WU28
GermOnline:ENSMUSG00000001289 Uniprot:Q9WU28
Length = 154
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/109 (38%), Positives = 71/109 (65%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTA 70
++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+
Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTS 68
Query: 71 SLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 69 SMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117
>RGD|1311436 [details] [associations]
symbol:Pfdn5 "prefoldin subunit 5" species:10116 "Rattus
norvegicus" [GO:0006457 "protein folding" evidence=IEA] [GO:0016272
"prefoldin complex" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA;ISO] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA;ISO] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 HAMAP:MF_00308 RGD:1311436
GO:GO:0045892 GO:GO:0006457 GO:GO:0060041 GO:GO:0090090
EMBL:CH474035 GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
eggNOG:COG1730 HOGENOM:HOG000207562 KO:K04797 PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 CTD:5204 GeneTree:ENSGT00390000008783
HOVERGEN:HBG004539 OrthoDB:EOG415GFQ EMBL:BC169128 IPI:IPI00870220
RefSeq:NP_001100264.2 UniGene:Rn.3401 STRING:B5DFN4
Ensembl:ENSRNOT00000017794 GeneID:300257 KEGG:rno:300257
UCSC:RGD:1311436 NextBio:646651 Genevestigator:B5DFN4
Uniprot:B5DFN4
Length = 154
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/109 (38%), Positives = 71/109 (65%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTA 70
++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ +G ++LVPLT+
Sbjct: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTS 68
Query: 71 SLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
S+YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 69 SMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 117
>DICTYBASE|DDB_G0280607 [details] [associations]
symbol:pfdn5 "prefoldin subunit 5" species:44689
"Dictyostelium discoideum" [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA;ISS] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996
dictyBase:DDB_G0280607 GO:GO:0006457 GenomeReviews:CM000152_GR
EMBL:AAFI02000037 GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
eggNOG:COG1730 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 RefSeq:XP_641076.1 ProteinModelPortal:Q54V55
STRING:Q54V55 EnsemblProtists:DDB0237720 GeneID:8622635
KEGG:ddi:DDB_G0280607 ProtClustDB:CLSZ2430603 Uniprot:Q54V55
Length = 160
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 40/108 (37%), Positives = 72/108 (66%)
Query: 12 MSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTAS 71
+S+EQL+ ++EQ + E+ L +S+ ++ A+++ A A+ L G MLVPLT+S
Sbjct: 14 LSLEQLQMVREQVEAEIQQLSESIQQLKHASNKYIEAKEAMGGLK-GTDGKDMLVPLTSS 72
Query: 72 LYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
+Y+PG ++ KVLVDIGTGY+VE +++G+++ RK+ L+ +++
Sbjct: 73 IYLPGKINSNEKVLVDIGTGYYVEMGIEQGQNFSNRKVQLITEQVNKV 120
>FB|FBgn0038976 [details] [associations]
symbol:CG7048 species:7227 "Drosophila melanogaster"
[GO:0006457 "protein folding" evidence=ISS] [GO:0016272 "prefoldin
complex" evidence=ISS;IDA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 EMBL:AE014297 GO:GO:0006457
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:COG1730
KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293
GeneTree:ENSGT00390000008783 EMBL:AY051649 RefSeq:NP_001163688.1
RefSeq:NP_651053.1 UniGene:Dm.4526 ProteinModelPortal:Q9VCZ8
DIP:DIP-20776N IntAct:Q9VCZ8 MINT:MINT-1023881 STRING:Q9VCZ8
PaxDb:Q9VCZ8 PRIDE:Q9VCZ8 EnsemblMetazoa:FBtr0084257
EnsemblMetazoa:FBtr0301486 GeneID:42647 KEGG:dme:Dmel_CG7048
UCSC:CG7048-RA FlyBase:FBgn0038976 InParanoid:Q9VCZ8
OrthoDB:EOG40RXZ1 PhylomeDB:Q9VCZ8 GenomeRNAi:42647 NextBio:829861
Bgee:Q9VCZ8 GermOnline:CG7048 Uniprot:Q9VCZ8
Length = 168
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 39/121 (32%), Positives = 75/121 (61%)
Query: 2 ASSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQG 61
A S+ + K+S EQL IK++ + E+ +QDSL+ + ++ + AL +
Sbjct: 9 AKSEMIDLTKLSPEQLIQIKQEFEQEITNVQDSLSTLHGCQAKYAGSKEALGTFQPNWEN 68
Query: 62 AKMLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIE 121
++LVPLT+S+YVPG + D + ++DIGTGY++EK ++ KDY +R++ ++ +++ +
Sbjct: 69 RQILVPLTSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIEK 128
Query: 122 V 122
+
Sbjct: 129 I 129
>POMBASE|SPBC215.02 [details] [associations]
symbol:bob1 "prefoldin subunit 5 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0007021 "tubulin complex assembly" evidence=ISS]
[GO:0016272 "prefoldin complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996
PomBase:SPBC215.02 GO:GO:0005634 GO:GO:0006457 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0007021 GO:GO:0016272
InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:COG1730
HOGENOM:HOG000207562 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 EMBL:AY035821 PIR:T39892 RefSeq:NP_596679.1
ProteinModelPortal:O94307 IntAct:O94307 STRING:O94307 PRIDE:O94307
EnsemblFungi:SPBC215.02.1 GeneID:2540664 KEGG:spo:SPBC215.02
OrthoDB:EOG4TJ03P NextBio:20801788 Uniprot:O94307
Length = 154
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 45/119 (37%), Positives = 70/119 (58%)
Query: 4 SKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQ--G 61
+K + +S+EQL + +Q D E+ L S + A + ++D ++R + G
Sbjct: 5 NKAVDLTSLSLEQLSEVIKQLDSELEYLSTSYGQLGRAQLKFRECLANVND-AVRAENDG 63
Query: 62 AKMLVPLTASLYVPGTLDDAR-KVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
++LVPLT+SLYVPG L+ K+LVDIGTGY+VEK+ E +Y +RK L S+ + L
Sbjct: 64 KEVLVPLTSSLYVPGKLNLGNSKLLVDIGTGYYVEKSAGEATEYYKRKCEYLASSIENL 122
>SGD|S000004559 [details] [associations]
symbol:GIM5 "Subunit of the heterohexameric cochaperone
prefoldin complex" species:4932 "Saccharomyces cerevisiae"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0016272 "prefoldin complex"
evidence=IEA;ISS;IPI] [GO:0007021 "tubulin complex assembly"
evidence=ISS;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015631
"tubulin binding" evidence=IDA] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 SGD:S000004559
GO:GO:0006457 EMBL:BK006946 EMBL:Z46660 GO:GO:0015631 GO:GO:0007021
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:COG1730
HOGENOM:HOG000207562 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 GeneTree:ENSGT00390000008783 OrthoDB:EOG4TJ03P
PIR:S49633 RefSeq:NP_013616.1 ProteinModelPortal:Q04493 SMR:Q04493
DIP:DIP-1332N IntAct:Q04493 MINT:MINT-406816 STRING:Q04493
PaxDb:Q04493 PeptideAtlas:Q04493 EnsemblFungi:YML094W GeneID:854879
KEGG:sce:YML094W CYGD:YML094w NextBio:977825 Genevestigator:Q04493
GermOnline:YML094W Uniprot:Q04493
Length = 163
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/121 (33%), Positives = 70/121 (57%)
Query: 3 SSKGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRP-QG 61
SS+ + K++ EQL A+K+Q D E+ SL + A + + +S +G
Sbjct: 2 SSQKIDLTKLNPEQLNAVKQQFDQELQHFTQSLQALTMAKGKFTECIDDIKTVSQAGNEG 61
Query: 62 AKMLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQLIE 121
K+LVP +ASLY+PG + D +K +VDIGTGY+VEK+ + + ++K++ L Q+ +
Sbjct: 62 QKLLVPASASLYIPGKIVDNKKFMVDIGTGYYVEKSAEAAIAFYQKKVDKLNKESVQIQD 121
Query: 122 V 122
+
Sbjct: 122 I 122
>UNIPROTKB|H3BPF6 [details] [associations]
symbol:PFDN5 "Prefoldin subunit 5" species:9606 "Homo
sapiens" [GO:0006457 "protein folding" evidence=IEA] [GO:0016272
"prefoldin complex" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 GO:GO:0006457 EMBL:AC073611
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293 HGNC:HGNC:8869
ChiTaRS:PFDN5 Ensembl:ENST00000549759 Uniprot:H3BPF6
Length = 152
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 38/111 (34%), Positives = 66/111 (59%)
Query: 11 KMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQ-GAKMLVP-L 68
++++ QL+ +K Q D EV L S+ ++ ++ A L+ L+ + G + P
Sbjct: 5 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEDGISLCRPGW 64
Query: 69 TASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
+A +YVPG L D VL+D+GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 65 SAMMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKI 115
>ASPGD|ASPL0000060607 [details] [associations]
symbol:AN1205 species:162425 "Emericella nidulans"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0007021 "tubulin complex
assembly" evidence=IEA] [GO:0015631 "tubulin binding" evidence=IEA]
[GO:0016272 "prefoldin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 GO:GO:0006457 EMBL:BN001308
EMBL:AACD01000017 GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
eggNOG:COG1730 HOGENOM:HOG000207562 KO:K04797 PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 OrthoDB:EOG4TJ03P RefSeq:XP_658809.1
ProteinModelPortal:Q5BE25 STRING:Q5BE25
EnsemblFungi:CADANIAT00001419 GeneID:2876982 KEGG:ani:AN1205.2
OMA:YHAVCEN Uniprot:Q5BE25
Length = 173
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 42/117 (35%), Positives = 69/117 (58%)
Query: 9 MEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHD--LSLRPQGAK--- 63
+ +S QL+A++ + E+ L S +R A SR ++++ + +G +
Sbjct: 20 ISSLSTPQLRALQTRLSTELEHLTSSHAKLRAAQSRFRDCVRSINEGVIGSAKKGTEGKD 79
Query: 64 -MLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
+LVPLT+SLYV G L D KVLVD+GTGY+VEKT + ++ E+K+ L++N +L
Sbjct: 80 EILVPLTSSLYVKGRLTDREKVLVDVGTGYYVEKTAAKAIEFYEQKVKELETNLTEL 136
>WB|WBGene00020112 [details] [associations]
symbol:pfd-5 species:6239 "Caenorhabditis elegans"
[GO:0006457 "protein folding" evidence=IEA] [GO:0016272 "prefoldin
complex" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0035046 "pronuclear
migration" evidence=IMP] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 GO:GO:0009792 GO:GO:0035046
GO:GO:0006457 GO:GO:0002119 GO:GO:0040011 GO:GO:0040035
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579 EMBL:FO081317
eggNOG:COG1730 KO:K04797 OMA:KDYFKRR PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 GeneTree:ENSGT00390000008783 EMBL:AF303258
PIR:T16760 RefSeq:NP_498582.1 UniGene:Cel.34180
ProteinModelPortal:Q21993 DIP:DIP-25712N IntAct:Q21993
MINT:MINT-1091325 STRING:Q21993 PaxDb:Q21993
EnsemblMetazoa:R151.9.1 EnsemblMetazoa:R151.9.2 GeneID:176013
KEGG:cel:CELE_R151.9 CTD:176013 WormBase:R151.9
HOGENOM:HOG000020943 InParanoid:Q21993 NextBio:890736
Uniprot:Q21993
Length = 152
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 38/104 (36%), Positives = 63/104 (60%)
Query: 5 KGGGMEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKM 64
KG + ++S++QL +++ + E+N Q+S N ++ +R E + +AL D+ + G
Sbjct: 6 KGVPLSELSLQQLGELQKNCEQELNFFQESFNALKGLLTRNEKSISALDDVKIATAGHTA 65
Query: 65 LVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERK 108
L+PL+ SLY+ L D K LV+IGTGYFVE ++ K +RK
Sbjct: 66 LIPLSESLYIRAELSDPSKHLVEIGTGYFVELDREKAKAIFDRK 109
>CGD|CAL0001602 [details] [associations]
symbol:GIM5 species:5476 "Candida albicans" [GO:0016272
"prefoldin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007021 "tubulin complex assembly" evidence=IEA]
[GO:0015631 "tubulin binding" evidence=IEA] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 CGD:CAL0001602
GO:GO:0006457 EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0016272
InterPro:IPR009053 SUPFAM:SSF46579 eggNOG:COG1730 KO:K04797
PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293 RefSeq:XP_718492.1
RefSeq:XP_718576.1 ProteinModelPortal:Q5AA13 STRING:Q5AA13
GeneID:3639806 GeneID:3639886 KEGG:cal:CaO19.10008
KEGG:cal:CaO19.2471 Uniprot:Q5AA13
Length = 158
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 38/111 (34%), Positives = 62/111 (55%)
Query: 9 MEKMSVEQLKAIKEQTDLEVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPL 68
+ + +QL ++ D E+ SL + A S+L+ +++++L + +LVPL
Sbjct: 11 LNSLPPQQLIEFRKSIDEEITHFTQSLQALSAAQSKLKDCISSINNLEQSKEN-DLLVPL 69
Query: 69 TASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
T+SLY+PG + K LVDIGTGY+VEK+ D+ K KI L + +L
Sbjct: 70 TSSLYIPGQVVTRNKYLVDIGTGYYVEKSADKAKLGYNNKIKKLDDDAKKL 120
>UNIPROTKB|H9L0Y4 [details] [associations]
symbol:LOC100859376 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006457 "protein folding" evidence=IEA]
[GO:0016272 "prefoldin complex" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR004127 InterPro:IPR011599
InterPro:IPR027236 Pfam:PF02996 GO:GO:0006457 GO:GO:0016272
InterPro:IPR009053 SUPFAM:SSF46579 PANTHER:PTHR12674:SF0
TIGRFAMs:TIGR00293 GeneTree:ENSGT00390000008783 EMBL:AADN02059944
Ensembl:ENSGALT00000029369 OMA:LEYWYED Uniprot:H9L0Y4
Length = 71
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 27 EVNLLQDSLNNIRTATSRLESASTALHDLSLRPQGAKMLVPLTASLYVPGTLDDARKVLV 86
EV L S+ ++ ++ A L+ L+ +G +LVPLT+S+YVPG L D +VL+
Sbjct: 2 EVEFLSSSITQLKVVQTKYVEAKDCLNVLNKSNEGKDLLVPLTSSMYVPGKLSDVERVLI 61
Query: 87 DIGTGYFVEK 96
D+GTGY+VEK
Sbjct: 62 DVGTGYYVEK 71
>UNIPROTKB|E2RC90 [details] [associations]
symbol:PFDN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 GO:GO:0006457
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293
GeneTree:ENSGT00390000008783 EMBL:AAEX03014986
Ensembl:ENSCAFT00000011245 Uniprot:E2RC90
Length = 109
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 49 STALHDLSLRPQGAKMLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERK 108
S + +L+L PQ +ML +YVPG L D VL+D+GTGY+VEKT ++ KD+ +RK
Sbjct: 4 SVNITELNL-PQ-LEMLKNQLDQMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRK 61
Query: 109 INLLKSNFDQL 119
I+ L +++
Sbjct: 62 IDFLTKQMEKI 72
>UNIPROTKB|E2QZY7 [details] [associations]
symbol:E2QZY7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0016272 "prefoldin complex" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] InterPro:IPR004127
InterPro:IPR011599 InterPro:IPR027236 Pfam:PF02996 GO:GO:0006457
GO:GO:0016272 InterPro:IPR009053 SUPFAM:SSF46579
PANTHER:PTHR12674:SF0 TIGRFAMs:TIGR00293
GeneTree:ENSGT00390000008783 EMBL:AAEX03010418
Ensembl:ENSCAFT00000010322 OMA:LVNITML Uniprot:E2QZY7
Length = 108
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 72 LYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
+YVPG L D VL+D GTGY+VEKT ++ KD+ +RKI+ L +++
Sbjct: 25 MYVPGKLHDVEHVLID-GTGYYVEKTAEDAKDFFKRKIDFLTKQVEKI 71
>UNIPROTKB|K7GLH6 [details] [associations]
symbol:LOC100522472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0016272 "prefoldin complex" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] InterPro:IPR004127 Pfam:PF02996
InterPro:IPR009053 SUPFAM:SSF46579 GeneTree:ENSGT00390000018078
EMBL:FP015952 Ensembl:ENSSSCT00000034436 Uniprot:K7GLH6
Length = 71
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 64 MLVPLTASLYVPGTLDDARKVLVDIGTGYFVEKTMDEGKDYCERKINLLKSNFDQL 119
M V L + +V + D ++ V +G G+F+E T+ E + +RK NLL D L
Sbjct: 1 MQVDLGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSNLLTELSDSL 56
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.352 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 124 124 0.00091 102 3 11 23 0.41 31
29 0.39 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 510 (54 KB)
Total size of DFA: 98 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.19u 0.10s 14.29t Elapsed: 00:00:01
Total cpu time: 14.19u 0.10s 14.29t Elapsed: 00:00:01
Start: Mon May 20 22:11:48 2013 End: Mon May 20 22:11:49 2013