BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033244
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32KY6|DCTP1_BOVIN dCTP pyrophosphatase 1 OS=Bos taurus GN=DCTPP1 PE=2 SV=1
Length = 169
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%)
Query: 15 DVSLQELRDRLAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLPNWSSD 74
+ +L+++R AEFA R W+Q+H PRNLLLALVGEVGEL+E+FQW+ + G WS
Sbjct: 27 EPTLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKPDEEPGPQAWSPR 86
Query: 75 DKEHLEEELSDVLLYLIQLADVCGLDLGQAALAKIVKNARKYPV 118
++ L+EELSD+L+YL+ LA C +DL QA L K+ N R+YPV
Sbjct: 87 ERAALQEELSDILIYLVALAARCRVDLPQAVLCKMDTNRRRYPV 130
>sp|Q9QY93|DCTP1_MOUSE dCTP pyrophosphatase 1 OS=Mus musculus GN=Dctpp1 PE=1 SV=1
Length = 170
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 74/102 (72%)
Query: 17 SLQELRDRLAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLPNWSSDDK 76
+L+++R AEFA R W+Q+H PRNLLLALVGEVGEL+E+FQW+ + G W ++
Sbjct: 30 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKER 89
Query: 77 EHLEEELSDVLLYLIQLADVCGLDLGQAALAKIVKNARKYPV 118
L+EELSDVL+YL+ LA C +DL QA ++K+ N ++YPV
Sbjct: 90 AALQEELSDVLIYLVALAARCHVDLPQAVISKMDTNRQRYPV 131
>sp|Q9H773|DCTP1_HUMAN dCTP pyrophosphatase 1 OS=Homo sapiens GN=DCTPP1 PE=1 SV=1
Length = 170
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 76/108 (70%)
Query: 17 SLQELRDRLAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLPNWSSDDK 76
+L+++R AEFA R W+Q+H PRNLLLALVGEVGEL+E+FQW+ + G WS ++
Sbjct: 30 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRER 89
Query: 77 EHLEEELSDVLLYLIQLADVCGLDLGQAALAKIVKNARKYPVINQKSS 124
L+EELSDVL+YL+ LA C +DL A L+K+ N R+YP +SS
Sbjct: 90 AALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPAHLARSS 137
>sp|Q91VC0|DCTP1_RAT dCTP pyrophosphatase 1 OS=Rattus norvegicus GN=Dctpp1 PE=2 SV=1
Length = 170
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 75/105 (71%)
Query: 14 KDVSLQELRDRLAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLPNWSS 73
+ +L+++R AEFA R W+Q+H PRNLLLALVGEVGEL+E+FQW+ + G W
Sbjct: 27 PEPTLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKSDAEPGPQAWQP 86
Query: 74 DDKEHLEEELSDVLLYLIQLADVCGLDLGQAALAKIVKNARKYPV 118
++ L+EELSDVL+YL+ LA C +DL +A ++K+ N ++YPV
Sbjct: 87 KERAALQEELSDVLIYLVALAARCHVDLPRAVISKMDTNRQRYPV 131
>sp|P42979|YPJD_BACSU Uncharacterized protein YpjD OS=Bacillus subtilis (strain 168)
GN=ypjD PE=1 SV=1
Length = 111
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 37 YHSPRNLLLALVGEVGELS-EIFQWRGEVARGLPNWSSDDKEHLEEELSDVLLYLIQLAD 95
Y SP ++ L E+GEL+ E+ GE P +++D + +EEE+ DVL L+ LA+
Sbjct: 24 YFSPLAMMARLTEELGELAREVNHRYGEK----PKKATEDDKSMEEEIGDVLFVLVCLAN 79
Query: 96 VCGLDLGQA 104
+ L +A
Sbjct: 80 SLDISLEEA 88
>sp|O32263|YVDC_BACSU Uncharacterized protein YvdC OS=Bacillus subtilis (strain 168)
GN=yvdC PE=4 SV=1
Length = 106
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 25 LAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLPNWS----SDDKEHLE 80
+ EF E RGW +Y P + L+ E GEL+ + E+ R P+ ++ K+ L
Sbjct: 10 MKEFYEKRGWTEY-GPFIRVGFLMEEAGELARAVRAY-EIGRDRPDEKESSRAEQKQELI 67
Query: 81 EELSDVLLYLIQLADVCGLDL 101
EE+ DV+ + LAD+ G+ L
Sbjct: 68 EEMGDVIGNIAILADMYGVSL 88
>sp|Q7VZ77|CYSG_BORPE Siroheme synthase OS=Bordetella pertussis (strain Tohama I / ATCC
BAA-589 / NCTC 13251) GN=cysG PE=3 SV=1
Length = 473
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Query: 25 LAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLP 69
L E A RG + P LL+ +GEV L++ QW G+ RGLP
Sbjct: 428 LPEIARRRGVR----PPALLV--IGEVAALADTLQWFGQHQRGLP 466
>sp|Q7WB57|CYSG_BORPA Siroheme synthase OS=Bordetella parapertussis (strain 12822 / ATCC
BAA-587 / NCTC 13253) GN=cysG PE=3 SV=1
Length = 473
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 25 LAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLP 69
LAE E+ + P L ++GEV L++ QW G+ GLP
Sbjct: 425 LAELPEIARRRSVRPPA---LLVIGEVAALADTLQWFGQHQHGLP 466
>sp|Q7WMM4|CYSG_BORBR Siroheme synthase OS=Bordetella bronchiseptica (strain ATCC BAA-588
/ NCTC 13252 / RB50) GN=cysG PE=3 SV=1
Length = 473
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 25 LAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGEVARGLP 69
LAE E+ + P L ++GEV L++ QW G+ GLP
Sbjct: 425 LAELPEIARRRSVRPPA---LLVIGEVAALADTLQWFGQHQHGLP 466
>sp|Q8DC49|SYA_VIBVU Alanine--tRNA ligase OS=Vibrio vulnificus (strain CMCP6) GN=alaS
PE=3 SV=1
Length = 860
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 23 DRLAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGE-VARGLPNWSSDDKEHLEE 81
DR+ + +G KQY S + G G +EIF GE + G P +D + E
Sbjct: 150 DRIIRIGDKKGGKQYESDNFWTMGDTGPCGPCTEIFYDHGEHIWGGRPGTPEEDGDRFIE 209
Query: 82 ELSDVLLYLIQLAD 95
++V + + AD
Sbjct: 210 IWNNVFMQFNRHAD 223
>sp|Q7MHR6|SYA_VIBVY Alanine--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=alaS
PE=3 SV=1
Length = 860
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 23 DRLAEFAEVRGWKQYHSPRNLLLALVGEVGELSEIFQWRGE-VARGLPNWSSDDKEHLEE 81
DR+ + +G KQY S + G G +EIF GE + G P +D + E
Sbjct: 150 DRIIRIGDKKGGKQYESDNFWTMGDTGPCGPCTEIFYDHGEHIWGGRPGTPEEDGDRFIE 209
Query: 82 ELSDVLLYLIQLAD 95
++V + + AD
Sbjct: 210 IWNNVFMQFNRHAD 223
>sp|Q2NM15|FARS_MAIZE (E)-beta-farnesene synthase OS=Zea mays GN=TPS10 PE=1 SV=1
Length = 533
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 64 VARGLPNWSSDDKEHLEEELSDVLLYLIQLADVCGLDLG 102
+A + W + E L + D LYL++ D CG +LG
Sbjct: 301 LAEAIYRWEENAAELLPRYMKDFYLYLLKTIDSCGDELG 339
>sp|Q9WYD0|PROB_THEMA Glutamate 5-kinase OS=Thermotoga maritima (strain ATCC 43589 / MSB8
/ DSM 3109 / JCM 10099) GN=proB PE=3 SV=1
Length = 353
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 50 EVGELSEIFQWRGE-VARGLPNWSSDDKE----HLEEELSDVLLY 89
+VG++ EI GE V RG+ N+SS D E H +L +L Y
Sbjct: 294 DVGDVVEIVNEEGELVGRGIVNYSSSDLEKIAGHKSSDLKKILGY 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,033,914
Number of Sequences: 539616
Number of extensions: 1649441
Number of successful extensions: 4962
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4950
Number of HSP's gapped (non-prelim): 22
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)