Query 033246
Match_columns 123
No_of_seqs 108 out of 1027
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:14:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydh_A AT5G11950; structural g 100.0 2.8E-36 9.7E-41 233.3 10.4 113 1-113 95-207 (216)
2 2a33_A Hypothetical protein; s 100.0 2.6E-36 8.9E-41 233.2 10.1 115 1-115 99-213 (215)
3 3sbx_A Putative uncharacterize 100.0 8.5E-35 2.9E-39 221.4 9.9 91 1-91 98-188 (189)
4 1t35_A Hypothetical protein YV 100.0 9.7E-35 3.3E-39 220.5 8.7 97 1-97 87-183 (191)
5 3qua_A Putative uncharacterize 100.0 2.6E-34 8.9E-39 220.2 8.9 91 1-91 107-197 (199)
6 1wek_A Hypothetical protein TT 100.0 3.8E-31 1.3E-35 204.6 9.0 95 1-96 121-216 (217)
7 3gh1_A Predicted nucleotide-bi 100.0 2E-29 6.7E-34 211.8 6.8 103 1-107 237-351 (462)
8 1weh_A Conserved hypothetical 99.9 1.6E-28 5.6E-33 183.3 6.0 83 1-92 87-170 (171)
9 3bq9_A Predicted rossmann fold 99.9 3.8E-27 1.3E-31 198.4 8.1 102 1-107 235-349 (460)
10 1rcu_A Conserved hypothetical 99.9 2E-25 6.8E-30 170.3 6.8 85 1-94 108-193 (195)
11 2iz6_A Molybdenum cofactor car 99.8 8.4E-21 2.9E-25 142.6 2.1 76 1-94 97-172 (176)
12 2khz_A C-MYC-responsive protei 95.3 0.056 1.9E-06 39.0 6.8 78 3-93 69-148 (165)
13 2f62_A Nucleoside 2-deoxyribos 94.1 0.068 2.3E-06 38.8 4.7 84 4-95 60-159 (161)
14 1f8y_A Nucleoside 2-deoxyribos 93.4 0.13 4.4E-06 37.1 5.1 42 4-51 71-116 (157)
15 3ehd_A Uncharacterized conserv 92.4 0.27 9.2E-06 35.8 5.7 83 4-93 62-160 (162)
16 2o6l_A UDP-glucuronosyltransfe 92.2 0.39 1.3E-05 33.0 6.2 63 10-93 85-151 (170)
17 3ufx_B Succinyl-COA synthetase 90.0 0.52 1.8E-05 38.5 5.7 82 12-112 302-385 (397)
18 2yjn_A ERYCIII, glycosyltransf 89.5 1.4 4.8E-05 34.8 7.8 66 8-93 332-400 (441)
19 4fzr_A SSFS6; structural genom 89.1 0.8 2.7E-05 35.4 6.0 33 7-49 296-328 (398)
20 2p6p_A Glycosyl transferase; X 88.9 1.8 6.2E-05 33.1 7.9 66 8-93 276-344 (384)
21 1s2d_A Purine trans deoxyribos 88.3 1.2 4E-05 32.3 6.0 39 4-48 74-116 (167)
22 3otg_A CALG1; calicheamicin, T 87.4 2.4 8.4E-05 32.5 7.7 33 7-49 304-336 (412)
23 2iya_A OLEI, oleandomycin glyc 86.7 3 0.0001 32.5 8.0 68 7-94 317-387 (424)
24 2iyf_A OLED, oleandomycin glyc 86.4 3.2 0.00011 32.2 8.0 33 7-49 295-327 (430)
25 4fyk_A Deoxyribonucleoside 5'- 85.8 1.5 5.1E-05 31.6 5.4 41 3-49 60-102 (152)
26 3rsc_A CALG2; TDP, enediyne, s 84.1 2.8 9.6E-05 32.3 6.6 71 7-94 309-379 (415)
27 2f9f_A First mannosyl transfer 83.9 2.9 9.8E-05 28.7 6.0 68 5-94 91-160 (177)
28 3ia7_A CALG4; glycosysltransfe 83.8 2.7 9.1E-05 32.0 6.3 67 7-93 293-363 (402)
29 1v4v_A UDP-N-acetylglucosamine 82.9 3.8 0.00013 31.1 6.8 64 6-94 269-332 (376)
30 3tsa_A SPNG, NDP-rhamnosyltran 82.3 4 0.00014 31.2 6.8 67 9-94 284-354 (391)
31 1iir_A Glycosyltransferase GTF 82.2 3.5 0.00012 32.2 6.5 69 8-93 298-366 (415)
32 1rrv_A Glycosyltransferase GTF 80.4 4.1 0.00014 31.8 6.3 69 8-93 299-367 (416)
33 3maj_A DNA processing chain A; 79.0 11 0.00037 30.9 8.6 75 2-92 227-303 (382)
34 3hbm_A UDP-sugar hydrolase; PS 79.0 1.3 4.5E-05 34.3 3.0 49 6-68 220-268 (282)
35 3beo_A UDP-N-acetylglucosamine 78.3 9.7 0.00033 28.5 7.7 63 6-93 277-339 (375)
36 3ico_A 6PGL, 6-phosphogluconol 78.3 13 0.00045 28.5 8.5 44 9-53 52-95 (268)
37 2nx2_A Hypothetical protein YP 78.1 1.7 5.7E-05 31.8 3.2 46 2-49 121-169 (181)
38 3h4t_A Glycosyltransferase GTF 77.8 4.6 0.00016 31.6 5.9 70 7-93 280-349 (404)
39 3tx2_A Probable 6-phosphogluco 77.3 17 0.00058 27.4 8.8 44 9-53 36-79 (251)
40 3oc6_A 6-phosphogluconolactona 73.3 19 0.00067 27.0 8.2 44 9-53 36-79 (248)
41 3oti_A CALG3; calicheamicin, T 73.0 3.1 0.00011 32.1 3.7 33 7-49 295-327 (398)
42 1vgv_A UDP-N-acetylglucosamine 69.2 13 0.00044 28.0 6.4 64 5-93 276-339 (384)
43 2jzc_A UDP-N-acetylglucosamine 68.8 3.3 0.00011 31.2 2.9 53 7-69 127-181 (224)
44 2bon_A Lipid kinase; DAG kinas 68.7 7.1 0.00024 30.3 4.9 38 10-49 81-118 (332)
45 3u43_A Colicin-E2 immunity pro 67.5 3.1 0.00011 27.8 2.2 64 24-98 11-79 (94)
46 2iw1_A Lipopolysaccharide core 67.3 28 0.00097 25.7 7.9 68 5-94 264-335 (374)
47 1f0k_A MURG, UDP-N-acetylgluco 64.0 32 0.0011 25.5 7.7 37 6-52 249-285 (364)
48 1nns_A L-asparaginase II; amid 63.9 9.7 0.00033 30.1 4.9 49 11-62 79-132 (326)
49 3lhi_A Putative 6-phosphogluco 63.0 8.8 0.0003 28.7 4.3 44 7-53 29-72 (232)
50 4hwg_A UDP-N-acetylglucosamine 62.0 28 0.00095 27.5 7.3 65 5-95 276-341 (385)
51 3okp_A GDP-mannose-dependent a 61.8 27 0.00093 25.9 6.9 70 4-95 265-343 (394)
52 3dzc_A UDP-N-acetylglucosamine 61.1 16 0.00056 28.7 5.8 65 5-94 301-365 (396)
53 3nwp_A 6-phosphogluconolactona 61.1 11 0.00038 28.2 4.5 44 7-53 32-75 (233)
54 2bkx_A Glucosamine-6-phosphate 60.2 31 0.0011 25.2 6.8 41 12-53 28-70 (242)
55 3uqz_A DNA processing protein 59.5 28 0.00097 27.3 6.8 73 2-90 206-280 (288)
56 3ca8_A Protein YDCF; two domai 59.4 11 0.00038 28.9 4.4 37 11-52 36-73 (266)
57 3zqu_A Probable aromatic acid 59.3 4.8 0.00016 30.2 2.2 79 12-92 95-184 (209)
58 2gek_A Phosphatidylinositol ma 58.0 48 0.0016 24.7 7.7 68 5-93 276-346 (406)
59 1agx_A Glutaminase-asparaginas 57.5 13 0.00046 29.4 4.6 49 11-62 82-135 (331)
60 1vl1_A 6PGL, 6-phosphogluconol 56.5 32 0.0011 25.6 6.4 40 11-53 44-83 (232)
61 2xci_A KDO-transferase, 3-deox 55.1 20 0.00068 27.8 5.3 68 6-94 272-344 (374)
62 1o7j_A L-asparaginase; atomic 54.9 14 0.00048 29.2 4.3 49 11-62 85-138 (327)
63 3s2u_A UDP-N-acetylglucosamine 54.2 7.3 0.00025 30.3 2.6 34 6-49 247-280 (365)
64 1wls_A L-asparaginase; structu 54.2 16 0.00054 29.0 4.5 51 10-62 72-127 (328)
65 4gud_A Imidazole glycerol phos 53.8 13 0.00043 26.6 3.6 12 9-21 38-49 (211)
66 3imk_A Putative molybdenum car 52.9 30 0.001 25.1 5.5 46 2-51 64-110 (158)
67 3l49_A ABC sugar (ribose) tran 52.8 33 0.0011 24.6 5.9 38 7-49 57-94 (291)
68 3lwd_A 6-phosphogluconolactona 52.7 13 0.00044 27.7 3.6 43 8-53 29-71 (226)
69 3sqn_A Conserved domain protei 51.6 5.5 0.00019 33.0 1.5 16 11-26 398-413 (485)
70 2wlt_A L-asparaginase; hydrola 51.6 15 0.00052 29.0 4.1 49 11-62 85-138 (332)
71 2bfw_A GLGA glycogen synthase; 51.4 25 0.00085 23.8 4.8 69 4-94 108-178 (200)
72 1p3y_1 MRSD protein; flavoprot 51.0 33 0.0011 25.0 5.6 86 9-95 79-185 (194)
73 4gdh_A DJ-1, uncharacterized p 49.6 25 0.00087 25.0 4.7 34 15-48 76-114 (194)
74 2d6f_A Glutamyl-tRNA(Gln) amid 49.5 22 0.00074 29.5 4.8 49 11-62 167-220 (435)
75 1wsa_A Asparaginase, asparagin 49.0 16 0.00053 29.0 3.7 49 11-62 83-136 (330)
76 2jjm_A Glycosyl transferase, g 48.9 58 0.002 24.5 6.9 68 6-94 279-348 (394)
77 2him_A L-asparaginase 1; hydro 48.4 25 0.00084 28.2 4.9 51 10-62 100-155 (358)
78 3ot5_A UDP-N-acetylglucosamine 47.5 52 0.0018 25.9 6.6 64 4-93 294-358 (403)
79 1mvl_A PPC decarboxylase athal 46.6 18 0.00061 27.0 3.5 86 9-94 94-197 (209)
80 3ksm_A ABC-type sugar transpor 46.3 41 0.0014 23.7 5.4 36 9-49 56-92 (276)
81 4amg_A Snogd; transferase, pol 45.1 20 0.00069 27.1 3.7 49 7-68 300-348 (400)
82 3qhp_A Type 1 capsular polysac 44.9 57 0.0019 21.2 5.7 68 5-94 68-138 (166)
83 3g1w_A Sugar ABC transporter; 42.8 47 0.0016 24.0 5.4 38 7-49 57-94 (305)
84 3hn6_A Glucosamine-6-phosphate 42.6 54 0.0018 25.3 5.9 38 14-53 56-96 (289)
85 3kkl_A Probable chaperone prot 42.5 18 0.00061 27.1 3.0 35 15-49 101-139 (244)
86 2fvy_A D-galactose-binding per 42.4 64 0.0022 23.2 6.0 36 9-49 57-92 (309)
87 3n7t_A Macrophage binding prot 41.8 19 0.00064 27.2 3.0 35 15-49 108-146 (247)
88 3afo_A NADH kinase POS5; alpha 41.8 67 0.0023 26.0 6.5 55 8-68 111-173 (388)
89 8abp_A L-arabinose-binding pro 41.7 55 0.0019 23.6 5.6 38 7-49 53-90 (306)
90 3l6u_A ABC-type sugar transpor 41.7 47 0.0016 23.8 5.2 38 7-49 60-97 (293)
91 3tha_A Tryptophan synthase alp 41.3 30 0.001 26.5 4.2 43 18-67 69-116 (252)
92 1rw7_A YDR533CP; alpha-beta sa 41.1 17 0.00057 26.9 2.6 34 15-48 101-138 (243)
93 3gbv_A Putative LACI-family tr 41.1 35 0.0012 24.5 4.4 56 8-68 66-133 (304)
94 3c48_A Predicted glycosyltrans 40.8 69 0.0024 24.3 6.2 70 4-94 318-389 (438)
95 3llo_A Prestin; STAS domain, c 40.6 69 0.0024 21.1 5.6 60 21-92 81-140 (143)
96 2hy7_A Glucuronosyltransferase 40.2 36 0.0012 26.5 4.6 81 4-109 277-366 (406)
97 4hcj_A THIJ/PFPI domain protei 40.1 11 0.00037 27.0 1.4 34 15-48 72-108 (177)
98 3l3b_A ES1 family protein; ssg 40.0 26 0.00089 26.3 3.6 11 15-25 110-120 (242)
99 3m9w_A D-xylose-binding peripl 39.9 40 0.0014 24.6 4.6 37 8-49 55-91 (313)
100 3uug_A Multiple sugar-binding 39.7 63 0.0022 23.6 5.7 38 7-49 55-92 (330)
101 2x6q_A Trehalose-synthase TRET 39.6 66 0.0023 24.4 5.9 66 5-94 309-377 (416)
102 1zq1_A Glutamyl-tRNA(Gln) amid 39.5 38 0.0013 28.0 4.8 50 11-62 168-222 (438)
103 3eb9_A 6-phosphogluconolactona 39.3 29 0.001 26.3 3.8 44 9-53 33-78 (266)
104 1vhq_A Enhancing lycopene bios 39.2 18 0.0006 26.5 2.5 10 15-24 93-102 (232)
105 3e15_A Glucose-6-phosphate 1-d 38.7 34 0.0012 27.0 4.2 44 10-54 58-102 (312)
106 2ejb_A Probable aromatic acid 38.3 56 0.0019 23.6 5.1 81 9-92 79-171 (189)
107 2kln_A Probable sulphate-trans 38.3 80 0.0027 20.4 5.6 61 20-93 64-124 (130)
108 4hyl_A Stage II sporulation pr 37.9 63 0.0022 20.3 4.9 57 20-92 58-114 (117)
109 1fr2_A Colicin E9 immunity pro 37.8 16 0.00054 23.9 1.8 41 54-98 34-79 (86)
110 2qv7_A Diacylglycerol kinase D 37.8 21 0.00072 27.6 2.8 34 12-49 81-114 (337)
111 2x7x_A Sensor protein; transfe 37.5 76 0.0026 23.4 5.9 37 8-49 59-95 (325)
112 1sbz_A Probable aromatic acid 37.4 73 0.0025 23.3 5.6 80 11-92 77-167 (197)
113 1n57_A Chaperone HSP31, protei 37.1 22 0.00076 27.2 2.8 32 15-48 148-185 (291)
114 2fn9_A Ribose ABC transporter, 35.7 69 0.0024 22.9 5.3 37 8-49 55-91 (290)
115 3rot_A ABC sugar transporter, 35.1 46 0.0016 24.1 4.2 38 7-49 57-94 (297)
116 3nav_A Tryptophan synthase alp 35.0 58 0.002 25.0 4.9 44 20-67 77-125 (271)
117 3l18_A Intracellular protease 34.8 22 0.00074 24.3 2.2 37 12-49 64-103 (168)
118 1h4x_A SPOIIAA, anti-sigma F f 34.0 83 0.0028 19.6 4.9 15 79-93 100-114 (117)
119 2ioy_A Periplasmic sugar-bindi 33.6 78 0.0027 22.7 5.3 37 8-49 54-90 (283)
120 2vk2_A YTFQ, ABC transporter p 33.6 67 0.0023 23.3 5.0 37 8-49 55-91 (306)
121 3jy6_A Transcriptional regulat 33.6 71 0.0024 22.7 5.0 34 8-49 60-93 (276)
122 3d02_A Putative LACI-type tran 33.4 92 0.0031 22.3 5.6 36 9-49 59-94 (303)
123 3st8_A Bifunctional protein GL 33.4 29 0.001 28.1 3.1 60 14-93 14-76 (501)
124 2v4u_A CTP synthase 2; pyrimid 33.3 24 0.00081 27.0 2.4 15 9-24 88-102 (289)
125 3vnd_A TSA, tryptophan synthas 33.3 64 0.0022 24.6 4.9 41 24-67 78-123 (267)
126 3tb6_A Arabinose metabolism tr 33.2 77 0.0026 22.5 5.1 55 8-67 68-136 (298)
127 1oi4_A Hypothetical protein YH 32.9 32 0.0011 24.3 2.9 34 15-49 89-126 (193)
128 1t1j_A Hypothetical protein; s 32.8 50 0.0017 22.7 3.8 37 6-48 77-118 (125)
129 2h3h_A Sugar ABC transporter, 32.8 80 0.0027 23.0 5.3 37 8-49 54-90 (313)
130 2iuy_A Avigt4, glycosyltransfe 32.5 70 0.0024 23.5 4.9 68 5-94 225-306 (342)
131 1u9c_A APC35852; structural ge 32.4 30 0.001 24.8 2.7 35 15-49 92-130 (224)
132 4pga_A Glutaminase-asparaginas 32.2 41 0.0014 26.7 3.7 49 11-62 90-143 (337)
133 2ywj_A Glutamine amidotransfer 32.1 53 0.0018 22.7 4.0 15 11-26 37-51 (186)
134 1eiw_A Hypothetical protein MT 32.0 51 0.0017 22.0 3.7 37 9-51 36-77 (111)
135 2ab0_A YAJL; DJ-1/THIJ superfa 31.9 41 0.0014 23.9 3.4 34 15-48 69-106 (205)
136 3ot1_A 4-methyl-5(B-hydroxyeth 31.5 42 0.0014 24.0 3.4 34 15-48 74-111 (208)
137 3e61_A Putative transcriptiona 31.2 1.3E+02 0.0044 21.2 6.0 51 8-67 61-121 (277)
138 2rk3_A Protein DJ-1; parkinson 30.9 44 0.0015 23.4 3.4 35 15-49 69-107 (197)
139 2qjg_A Putative aldolase MJ040 30.5 1.1E+02 0.0038 22.3 5.8 74 12-93 180-256 (273)
140 3s40_A Diacylglycerol kinase; 30.4 27 0.00094 26.6 2.4 35 11-49 63-97 (304)
141 3nxk_A Cytoplasmic L-asparagin 30.3 46 0.0016 26.4 3.7 50 10-62 87-141 (334)
142 2vrn_A Protease I, DR1199; cys 30.2 41 0.0014 23.2 3.1 35 15-49 78-116 (190)
143 3dbi_A Sugar-binding transcrip 29.6 1.1E+02 0.0037 22.6 5.6 54 8-67 116-180 (338)
144 3c98_A Syntaxin-binding protei 29.4 36 0.0012 28.6 3.1 40 13-55 548-587 (606)
145 4e08_A DJ-1 beta; flavodoxin-l 28.9 50 0.0017 23.0 3.4 35 15-49 70-108 (190)
146 3fro_A GLGA glycogen synthase; 28.8 1.1E+02 0.0038 22.9 5.5 68 5-94 324-393 (439)
147 3noq_A THIJ/PFPI family protei 28.8 48 0.0016 24.3 3.4 34 15-48 68-104 (231)
148 1th8_B Anti-sigma F factor ant 28.7 1.1E+02 0.0036 18.9 4.8 17 16-32 16-34 (116)
149 4dgh_A Sulfate permease family 28.5 1E+02 0.0035 19.9 4.8 31 22-55 32-64 (130)
150 2x0d_A WSAF; GT4 family, trans 28.5 1.2E+02 0.004 23.8 5.9 68 4-93 307-376 (413)
151 3t6o_A Sulfate transporter/ant 28.4 45 0.0016 21.4 2.9 35 15-50 17-56 (121)
152 3oy2_A Glycosyltransferase B73 28.1 1E+02 0.0035 23.2 5.3 75 4-95 266-354 (413)
153 2rjo_A Twin-arginine transloca 27.9 85 0.0029 23.1 4.7 33 12-49 64-96 (332)
154 1rq8_A Conserved hypothetical 27.7 52 0.0018 22.0 3.1 54 34-93 10-68 (104)
155 2o5h_A Hypothetical protein; a 27.6 1E+02 0.0035 21.7 4.7 42 56-98 55-96 (136)
156 3nva_A CTP synthase; rossman f 27.3 17 0.0006 31.1 0.8 35 10-45 349-383 (535)
157 1mqs_A SLY1 protein, SLY1P; SM 27.3 1.1E+02 0.0037 26.2 5.8 51 12-64 609-662 (671)
158 2w7t_A CTP synthetase, putativ 27.2 19 0.00066 27.3 1.0 15 9-24 65-79 (273)
159 1unk_A Colicin E7; immunity pr 27.1 23 0.00079 23.2 1.2 41 54-98 35-80 (87)
160 1y89_A DEVB protein; structura 26.9 1.2E+02 0.0041 22.2 5.4 42 11-53 28-71 (238)
161 2hi6_A UPF0107 protein AF0055; 26.7 19 0.00064 25.6 0.7 44 11-58 49-92 (141)
162 1m6e_X S-adenosyl-L-methionnin 26.7 64 0.0022 25.8 4.0 42 52-93 225-269 (359)
163 4hdr_A ARSA; transferase; HET: 26.6 56 0.0019 26.4 3.6 30 18-47 34-66 (348)
164 2fep_A Catabolite control prot 26.2 1.3E+02 0.0044 21.6 5.4 53 8-67 69-132 (289)
165 2i2c_A Probable inorganic poly 26.1 87 0.003 23.4 4.5 51 12-67 36-94 (272)
166 1vco_A CTP synthetase; tetrame 25.5 26 0.00087 29.9 1.5 36 9-45 353-388 (550)
167 3dzv_A 4-methyl-5-(beta-hydrox 25.5 70 0.0024 24.5 3.9 40 6-47 53-94 (273)
168 1wx1_A Nicotinate-nucleotide-- 25.2 75 0.0025 25.4 4.1 29 18-46 19-50 (335)
169 3h75_A Periplasmic sugar-bindi 25.1 1.1E+02 0.0037 22.7 4.9 33 11-49 62-94 (350)
170 2rgy_A Transcriptional regulat 24.6 1.1E+02 0.0039 21.8 4.8 52 9-67 65-127 (290)
171 1tjy_A Sugar transport protein 24.6 1.2E+02 0.004 22.3 4.9 37 8-49 57-93 (316)
172 3er6_A Putative transcriptiona 24.4 52 0.0018 23.6 2.8 37 12-49 75-116 (209)
173 1yt5_A Inorganic polyphosphate 24.3 1.2E+02 0.0041 22.4 5.0 31 12-49 42-72 (258)
174 1ujp_A Tryptophan synthase alp 24.0 1.1E+02 0.0039 23.1 4.8 40 24-67 75-119 (271)
175 3dmy_A Protein FDRA; predicted 24.0 2.9E+02 0.01 22.9 7.7 76 12-96 329-414 (480)
176 3fkr_A L-2-keto-3-deoxyarabona 24.0 98 0.0034 23.8 4.5 37 12-49 104-145 (309)
177 1vkf_A Glycerol uptake operon 23.4 89 0.003 23.0 4.0 34 10-48 30-63 (188)
178 1wv2_A Thiazole moeity, thiazo 23.3 43 0.0015 26.1 2.3 13 80-92 222-234 (265)
179 3k4h_A Putative transcriptiona 23.2 1.3E+02 0.0044 21.3 4.8 52 9-67 67-130 (292)
180 2ekk_A UBA domain from E3 ubiq 23.0 12 0.00041 21.1 -0.7 34 59-92 12-45 (47)
181 2ekc_A AQ_1548, tryptophan syn 22.9 1.5E+02 0.005 22.1 5.2 41 24-67 77-122 (262)
182 2pq6_A UDP-glucuronosyl/UDP-gl 22.8 2.2E+02 0.0075 22.7 6.5 70 8-94 366-437 (482)
183 4hdr_B ARSB; transferase; HET: 22.7 86 0.0029 25.3 4.0 21 18-38 30-50 (350)
184 2dri_A D-ribose-binding protei 22.7 78 0.0027 22.5 3.5 35 10-49 56-90 (271)
185 2ojp_A DHDPS, dihydrodipicolin 22.6 1.3E+02 0.0044 22.8 4.9 37 12-49 97-135 (292)
186 3qxc_A Dethiobiotin synthetase 22.5 1.7E+02 0.0057 21.7 5.4 22 14-35 164-185 (242)
187 2v9d_A YAGE; dihydrodipicolini 22.5 1.3E+02 0.0045 23.6 5.0 38 11-49 126-165 (343)
188 3qk7_A Transcriptional regulat 22.4 1.5E+02 0.0052 21.2 5.1 52 9-67 63-125 (294)
189 3hpd_A Hydroxyethylthiazole ki 22.2 74 0.0025 24.4 3.4 39 6-47 51-92 (265)
190 2fp4_B Succinyl-COA ligase [GD 21.7 3.1E+02 0.011 21.9 7.5 72 12-93 318-391 (395)
191 3huu_A Transcription regulator 21.6 1.4E+02 0.0047 21.5 4.8 52 9-67 81-143 (305)
192 1jo0_A Hypothetical protein HI 21.6 59 0.002 21.4 2.4 52 37-94 14-70 (98)
193 3o74_A Fructose transport syst 21.6 95 0.0032 21.7 3.8 54 8-67 55-119 (272)
194 1gud_A ALBP, D-allose-binding 21.5 81 0.0028 22.7 3.4 35 10-49 58-92 (288)
195 1ofu_A FTSZ, cell division pro 21.5 56 0.0019 25.6 2.7 23 3-25 87-112 (320)
196 2pcq_A Putative dihydrodipicol 21.4 87 0.003 23.7 3.7 36 11-49 88-126 (283)
197 5nul_A Flavodoxin; electron tr 21.4 1.7E+02 0.0058 18.7 6.1 57 10-69 44-109 (138)
198 2qzs_A Glycogen synthase; glyc 21.4 1.4E+02 0.0048 23.1 5.0 73 6-94 361-439 (485)
199 2vc6_A MOSA, dihydrodipicolina 20.9 1.2E+02 0.004 23.1 4.3 37 12-49 96-134 (292)
200 1u0t_A Inorganic polyphosphate 20.7 1.7E+02 0.0058 22.2 5.3 35 9-49 73-107 (307)
201 2wkj_A N-acetylneuraminate lya 20.6 98 0.0033 23.7 3.9 37 12-49 107-146 (303)
202 3gv0_A Transcriptional regulat 20.6 1.8E+02 0.0061 20.7 5.2 52 9-67 64-126 (288)
203 3s5o_A 4-hydroxy-2-oxoglutarat 20.6 1.2E+02 0.0043 23.2 4.5 37 12-49 110-150 (307)
204 1o5k_A DHDPS, dihydrodipicolin 20.5 1.6E+02 0.0053 22.6 5.0 37 12-49 108-146 (306)
205 2rfg_A Dihydrodipicolinate syn 20.4 1.3E+02 0.0045 22.9 4.6 37 12-49 96-134 (297)
206 3b4u_A Dihydrodipicolinate syn 20.2 1.1E+02 0.0037 23.3 4.0 37 12-49 99-141 (294)
207 3hcw_A Maltose operon transcri 20.2 1.6E+02 0.0053 21.2 4.8 52 9-67 66-130 (295)
208 1r5l_A Alpha-TTP, protein (alp 20.1 2.5E+02 0.0084 20.1 6.4 73 14-91 139-222 (262)
No 1
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=2.8e-36 Score=233.30 Aligned_cols=113 Identities=60% Similarity=1.067 Sum_probs=92.7
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
|++||.+|+++|||||+||||+|||||+||+|||.|+|+|+|||+|+|.+|||+++++|+++|+++|||++++.+++.++
T Consensus 95 ~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~ 174 (216)
T 1ydh_A 95 MHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSA 174 (216)
T ss_dssp HHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEE
T ss_pred HHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCCCCcccceeccccccc
Q 033246 81 PNAKELVQKLEEYVPLHDGVVAKVKWEAEQVEL 113 (123)
Q Consensus 81 dd~ee~l~~l~~~~~~~~~~~~~~~w~~~~~~~ 113 (123)
+|++|+++.|+++.+.+.....+++|..++.+.
T Consensus 175 d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 207 (216)
T 1ydh_A 175 PTAKELMEKMEEYTPSHMHVASHESWKVEELGD 207 (216)
T ss_dssp SSHHHHHHHHHHCC-------------------
T ss_pred CCHHHHHHHHHHhcccccccccccccchhhccC
Confidence 999999999999998887777889999887655
No 2
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=2.6e-36 Score=233.25 Aligned_cols=115 Identities=76% Similarity=1.239 Sum_probs=90.8
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
|++||++|.++|||||++|||+|||||+||++||.|+|+|+|||+|+|.+|||++|++|+++|+++|||++++.+.+.++
T Consensus 99 f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~~~~~~~ 178 (215)
T 2a33_A 99 MHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSA 178 (215)
T ss_dssp HHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHHTTEEEE
T ss_pred HHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHCCeEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCCCCcccceeccccccccc
Q 033246 81 PNAKELVQKLEEYVPLHDGVVAKVKWEAEQVELNT 115 (123)
Q Consensus 81 dd~ee~l~~l~~~~~~~~~~~~~~~w~~~~~~~~~ 115 (123)
|||+|+++.|++++++......+++|..++.+|.+
T Consensus 179 d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (215)
T 2a33_A 179 PTAKELVKKLEEYAPCHERVATKLCWEMERIGYSS 213 (215)
T ss_dssp SSHHHHHHHHHC-----------------------
T ss_pred CCHHHHHHHHHHhcCccccccccccccccccCCCC
Confidence 99999999999998887777788999998887653
No 3
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=8.5e-35 Score=221.38 Aligned_cols=91 Identities=34% Similarity=0.593 Sum_probs=89.0
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
|++||.+|+++|||||+||||+|||||+||+|||.|+|+|+|||+|+|.+|||+++++|+++|+++|||++++.+.+.++
T Consensus 98 ~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~ 177 (189)
T 3sbx_A 98 MWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVV 177 (189)
T ss_dssp HHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTSSCHHHHHHEEEE
T ss_pred HHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCCHHHcCeEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHH
Q 033246 81 PNAKELVQKLE 91 (123)
Q Consensus 81 dd~ee~l~~l~ 91 (123)
||++|+++.|+
T Consensus 178 d~~ee~~~~l~ 188 (189)
T 3sbx_A 178 DNLDDALQACA 188 (189)
T ss_dssp SSHHHHHHHHC
T ss_pred CCHHHHHHHhc
Confidence 99999999874
No 4
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=9.7e-35 Score=220.48 Aligned_cols=97 Identities=41% Similarity=0.872 Sum_probs=91.6
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
|++||++|.++|||||++|||+|||||+||+|||.|+|+|+|||+++|.+|||+++++|+++|+++||+++++.+.+.++
T Consensus 87 ~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~~~~~~~ 166 (191)
T 1t35_A 87 MHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSS 166 (191)
T ss_dssp HHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHHHHEEEE
T ss_pred HHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHcCeEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 033246 81 PNAKELVQKLEEYVPLH 97 (123)
Q Consensus 81 dd~ee~l~~l~~~~~~~ 97 (123)
+||+|+++.|+++.++.
T Consensus 167 ~~~~e~~~~l~~~~~~~ 183 (191)
T 1t35_A 167 SRPDELIEQMQNYSYPI 183 (191)
T ss_dssp SSHHHHHHHHHTC----
T ss_pred CCHHHHHHHHHHhcCCc
Confidence 99999999999987653
No 5
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=2.6e-34 Score=220.19 Aligned_cols=91 Identities=42% Similarity=0.662 Sum_probs=89.3
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
|++||.+|+++|||||+||||+|||||+||+|||.|+|+|+|||+|+|.+|||+++++|+++|+++||+++++.+.+.++
T Consensus 107 ~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~~i~~~ 186 (199)
T 3qua_A 107 MRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQRAMDSLVVV 186 (199)
T ss_dssp HHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTTHHHHHHHHHTTTTTSSCHHHHHTSEEE
T ss_pred HHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccchHHHHHHHHHHHCCCCCHHHCCeEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHH
Q 033246 81 PNAKELVQKLE 91 (123)
Q Consensus 81 dd~ee~l~~l~ 91 (123)
|||+|+++.|+
T Consensus 187 d~~~e~~~~l~ 197 (199)
T 3qua_A 187 DNVEAALEACA 197 (199)
T ss_dssp SSHHHHHHHHS
T ss_pred CCHHHHHHHHh
Confidence 99999999986
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=99.97 E-value=3.8e-31 Score=204.60 Aligned_cols=95 Identities=32% Similarity=0.516 Sum_probs=88.3
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCC-CCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS 79 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~-~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~ 79 (123)
|++||++|.++|||||++|||+|||||+||+|+|.|+|+ ++|||+++|. +||+++++|+++|+++||+++++.+.+.+
T Consensus 121 f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~-~~w~~l~~~l~~~~~~Gfi~~~~~~~~~~ 199 (217)
T 1wek_A 121 FFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR-GYWEGLVRWLAFLRDQKAVGPEDLQLFRL 199 (217)
T ss_dssp HHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH-HHHHHHHHHHHHHHHTTSSCTTGGGGSEE
T ss_pred HHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc-ccchhHHHHHHHHHHCCCCCHHHcCeEEE
Confidence 689999999999999999999999999999999999996 6899999998 59999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhhcCC
Q 033246 80 APNAKELVQKLEEYVPL 96 (123)
Q Consensus 80 ~dd~ee~l~~l~~~~~~ 96 (123)
++||+|+++.|++++++
T Consensus 200 ~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 200 TDEPEEVVQALKAEAPP 216 (217)
T ss_dssp ESCHHHHHHHHHC----
T ss_pred eCCHHHHHHHHHHhcCC
Confidence 99999999999987653
No 7
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=99.95 E-value=2e-29 Score=211.79 Aligned_cols=103 Identities=22% Similarity=0.402 Sum_probs=91.0
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhC---CCCCcEEEEeC---CCccHHHHHHHHHHHHcCCCCcccc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLG---IHDKPVGLINV---DGYYNSLLNFIDKAVDDGFISPSQR 74 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg---~~~kPiilln~---~gf~~~l~~~l~~~~~~gfi~~~~~ 74 (123)
|++||.+|++.|||||+||||+|||||+||+|||.|++ .|+|||+|+|+ +|||++|++|+++++.++ ...
T Consensus 237 m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll~fL~~~v~eg----~~~ 312 (462)
T 3gh1_A 237 IEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLDKFITDTLGEA----ARK 312 (462)
T ss_dssp HHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHHCGG----GGG
T ss_pred HHHHHHHHHHHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcCCCcccHHHHHHHHHHHHhhhh----hhh
Confidence 78999999999999999999999999999999999888 78999999998 789999999999998776 345
Q ss_pred cceEEcCCHHHHHHHHHhhcC------CCCCCcccceec
Q 033246 75 SILVSAPNAKELVQKLEEYVP------LHDGVVAKVKWE 107 (123)
Q Consensus 75 ~~i~~~dd~ee~l~~l~~~~~------~~~~~~~~~~w~ 107 (123)
+.+.++|||+|+++.|+++.+ ....+++++||+
T Consensus 313 ~~~iv~DdpeEvl~~i~~~~~~v~~~r~~~~day~fnw~ 351 (462)
T 3gh1_A 313 HYSIAIDNPAEAARIMSNAMPLVRQHRKDKEDAYSFNWS 351 (462)
T ss_dssp GCEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCS
T ss_pred ccEEEcCCHHHHHHHHHHHHHHHHHHHhhcCCceeeeee
Confidence 677899999999999988642 222567889998
No 8
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=99.95 E-value=1.6e-28 Score=183.28 Aligned_cols=83 Identities=28% Similarity=0.427 Sum_probs=79.3
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCC-CCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS 79 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~-~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~ 79 (123)
|++||++|.++|||||++|||+|||||+||+|+|.|+|+ ++|| +++| |||++++ +++||+++++.+.+.+
T Consensus 87 f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~--g~~~~l~------~~~gfi~~~~~~~~~~ 157 (171)
T 1weh_A 87 LPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD--PYWLGLL------KAHGEIAPEDVGLLRV 157 (171)
T ss_dssp HHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC--GGGGGTC------CCBTTBCHHHHTTSEE
T ss_pred HHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC--cchhhhH------hhcCCCChhhcCeEEE
Confidence 689999999999999999999999999999999999997 6899 9999 8999987 8899999999999999
Q ss_pred cCCHHHHHHHHHh
Q 033246 80 APNAKELVQKLEE 92 (123)
Q Consensus 80 ~dd~ee~l~~l~~ 92 (123)
++||+|+++.+++
T Consensus 158 ~~~~~e~~~~l~~ 170 (171)
T 1weh_A 158 VADEEDLRRFLRS 170 (171)
T ss_dssp CCSHHHHHHHHHT
T ss_pred eCCHHHHHHHHHh
Confidence 9999999999875
No 9
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=99.94 E-value=3.8e-27 Score=198.44 Aligned_cols=102 Identities=22% Similarity=0.340 Sum_probs=88.3
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCC---CCCcEEEEe---CCCccHHHHHHHHHHHHcCCCCcccc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGI---HDKPVGLIN---VDGYYNSLLNFIDKAVDDGFISPSQR 74 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~---~~kPiilln---~~gf~~~l~~~l~~~~~~gfi~~~~~ 74 (123)
|++||.+|++.|||||+||||+|||||+||+|+|.|+|. |+|||+|+| ++|||+++++|+++++.+ ++..
T Consensus 235 m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~~----~~~~ 310 (460)
T 3bq9_A 235 IEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIGD----EARQ 310 (460)
T ss_dssp HHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTCT----TGGG
T ss_pred HHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhcc----hhhc
Confidence 689999999999999999999999999999999999875 899999998 578999999999998876 4555
Q ss_pred cceEEcCCHHHHHHHHHhh-------cCCCCCCcccceec
Q 033246 75 SILVSAPNAKELVQKLEEY-------VPLHDGVVAKVKWE 107 (123)
Q Consensus 75 ~~i~~~dd~ee~l~~l~~~-------~~~~~~~~~~~~w~ 107 (123)
+.+.+++||+|+++.++++ +..+ ...+++||+
T Consensus 311 ~~iiv~ddpeEal~~l~~~~~~v~~~y~~~-~~ry~~nW~ 349 (460)
T 3bq9_A 311 LYKIIIDDPAAVAQHMHAGMAAVKQYRRDS-GDAYYFNWT 349 (460)
T ss_dssp GCEEEESCHHHHHHHHHHHHHHHHHHHHHT-TCCSSSCCS
T ss_pred CcEEEeCCHHHHHHHHHHHHHHHHHHhccc-Cceeeeccc
Confidence 6678999999999988662 3222 367889998
No 10
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=99.92 E-value=2e-25 Score=170.34 Aligned_cols=85 Identities=26% Similarity=0.373 Sum_probs=79.2
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcC-CCCcccccceEE
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDG-FISPSQRSILVS 79 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~g-fi~~~~~~~i~~ 79 (123)
|++||++|.++|||||++|||+|||+|++++++ ++|||+++|.+|||+++ +++++++| |+++++.+.+.+
T Consensus 108 f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~------~~kPV~lln~~g~w~~~---l~~~~~~G~fi~~~~~~~i~~ 178 (195)
T 1rcu_A 108 FQMRSFVLLRNADVVVSIGGEIGTAIEILGAYA------LGKPVILLRGTGGWTDR---ISQVLIDGKYLDNRRIVEIHQ 178 (195)
T ss_dssp HHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH------TTCCEEEETTSCHHHHH---GGGGCBTTTBSSTTCCSCEEE
T ss_pred HHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHh------cCCCEEEECCCCccHHH---HHHHHHcCCcCCHHHcCeEEE
Confidence 579999999999999999999999999999998 58999999999999987 46789999 999999999999
Q ss_pred cCCHHHHHHHHHhhc
Q 033246 80 APNAKELVQKLEEYV 94 (123)
Q Consensus 80 ~dd~ee~l~~l~~~~ 94 (123)
++||+|+++.|+++.
T Consensus 179 ~~~~ee~~~~l~~~~ 193 (195)
T 1rcu_A 179 AWTVEEAVQIIEQIL 193 (195)
T ss_dssp ESSHHHHHHHHHTC-
T ss_pred eCCHHHHHHHHHHHh
Confidence 999999999998764
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=99.80 E-value=8.4e-21 Score=142.59 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=70.0
Q ss_pred CchHHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 1 MHQRKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 1 M~eRK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
|++||++|.++|||||++|||+|||+|+++++ .++|||+++|. |+ +++||+++++.+.+.++
T Consensus 97 ~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al------~~~kpV~~l~~---~~---------~~~gfi~~~~~~~i~~~ 158 (176)
T 2iz6_A 97 GSARDNINALSSNVLVAVGMGPGTAAEVALAL------KAKKPVVLLGT---QP---------EAEKFFTSLDAGLVHVA 158 (176)
T ss_dssp CSSSCCCCGGGCSEEEEESCCHHHHHHHHHHH------HTTCCEEEESC---CH---------HHHHHHHHHCTTTEEEE
T ss_pred HHHHHHHHHHhCCEEEEecCCccHHHHHHHHH------HhCCcEEEEcC---cc---------cccccCChhhcCeEEEc
Confidence 78999999999999999999999999999999 36999999985 66 56678999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 033246 81 PNAKELVQKLEEYV 94 (123)
Q Consensus 81 dd~ee~l~~l~~~~ 94 (123)
+||+|+++.|+++.
T Consensus 159 ~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 159 ADVAGAIAAVKQLL 172 (176)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999999875
No 12
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=95.28 E-value=0.056 Score=39.01 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=50.5
Q ss_pred hHHHHHHHhcCEEEEcCC--chhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 3 QRKAEMARNSDCFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 3 eRK~~m~~~sDa~I~lPG--G~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
+|-..+++.||++|+.++ ..||.-|+-.+..+ +|||+++..+.- ..-+ ..|. +|.-.....+.+.+
T Consensus 69 ~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~al------gKPVi~l~~~~~-~~~~---n~M~-~g~~~~~~~~~~~y- 136 (165)
T 2khz_A 69 EQDLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILCLFRPQS-GRVL---SAMI-RGAADGSRFQVWDY- 136 (165)
T ss_dssp HHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------CSSEEEEECTTT-TCCC---CHHH-HHTCCSSSEEEEEC-
T ss_pred HHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHHC------CCEEEEEEcCCC-CCcc---hhhh-cccCccceeEEEec-
Confidence 455678999999999975 67999999999875 999999965431 1111 1232 22222133344444
Q ss_pred CCHHHHHHHHHhh
Q 033246 81 PNAKELVQKLEEY 93 (123)
Q Consensus 81 dd~ee~l~~l~~~ 93 (123)
|.+|+.+.|+++
T Consensus 137 -~~~el~~~l~~~ 148 (165)
T 2khz_A 137 -AEGEVETMLDRY 148 (165)
T ss_dssp -CTTTHHHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 677777777665
No 13
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=94.08 E-value=0.068 Score=38.84 Aligned_cols=84 Identities=19% Similarity=0.157 Sum_probs=53.7
Q ss_pred HHHHHHHhcCEEEEc--C--C---chhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHH-cCCC------
Q 033246 4 RKAEMARNSDCFIAL--P--G---GYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVD-DGFI------ 69 (123)
Q Consensus 4 RK~~m~~~sDa~I~l--P--G---G~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~-~gfi------ 69 (123)
+-...++.||++|+. | | --||.-|+-.+..+ +|||+++..+ ++++.+......+ .|+.
T Consensus 60 ~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~Al------gKPVi~l~~d--~r~~~~~~~~~~d~~g~~vedf~~ 131 (161)
T 2f62_A 60 KNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAAL------NKMVLTFTSD--RRNMREKYGSGVDKDNLRVEGFGL 131 (161)
T ss_dssp HHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHT------TCEEEEECSC--CSCHHHHHTSSBCTTSCBCCCSSC
T ss_pred HHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHC------CCEEEEEEcC--chhhhhhcccccccccccccccCC
Confidence 445688999999999 5 3 57999999999976 9999999754 2333332111000 1111
Q ss_pred -Cccc-ccceEEcCCHHHHHHHHHhhcC
Q 033246 70 -SPSQ-RSILVSAPNAKELVQKLEEYVP 95 (123)
Q Consensus 70 -~~~~-~~~i~~~dd~ee~l~~l~~~~~ 95 (123)
..-. ...+.++++.+++++.+.+...
T Consensus 132 ~~NLMl~~~~~~~~~~~~~l~~l~~~~~ 159 (161)
T 2f62_A 132 PFNLMLYDGVEVFDSFESAFKYFLANFP 159 (161)
T ss_dssp SSCGGGCCSSCEESSHHHHHHHHHHHSC
T ss_pred cchhhhhhhheeeCCHHHHHHHHHHhhc
Confidence 0000 1122378999999999987643
No 14
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=93.38 E-value=0.13 Score=37.12 Aligned_cols=42 Identities=19% Similarity=0.058 Sum_probs=35.3
Q ss_pred HHHHHHHhcCEEEEcCCc----hhhHHHHHHHHHHHHhCCCCCcEEEEeCCC
Q 033246 4 RKAEMARNSDCFIALPGG----YGTLEELLEVITWAQLGIHDKPVGLINVDG 51 (123)
Q Consensus 4 RK~~m~~~sDa~I~lPGG----~GTLdEl~evlt~~qlg~~~kPiilln~~g 51 (123)
+-...++.||++|+...| .||.-|+-.+..+ +|||+++..+.
T Consensus 71 ~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~------gkPVv~~~~~~ 116 (157)
T 1f8y_A 71 NDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALSQ------GKYVLLVIPDE 116 (157)
T ss_dssp HHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHHT------TCEEEEEECGG
T ss_pred HhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHHC------CCeEEEEEcCC
Confidence 445678999999999866 8999999999976 99999997653
No 15
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=92.39 E-value=0.27 Score=35.82 Aligned_cols=83 Identities=17% Similarity=0.150 Sum_probs=51.0
Q ss_pred HHHHHHHhcCEEEEc-CCc---hhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccH---HHHHHHHHH---HHcCCCC---
Q 033246 4 RKAEMARNSDCFIAL-PGG---YGTLEELLEVITWAQLGIHDKPVGLINVDGYYN---SLLNFIDKA---VDDGFIS--- 70 (123)
Q Consensus 4 RK~~m~~~sDa~I~l-PGG---~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~---~l~~~l~~~---~~~gfi~--- 70 (123)
+-...++.||++|+. .|. -||.-|+-.++.+ +|||+++..+ +-. .--+-+..+ .+..|..
T Consensus 62 ~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~------gkPVi~~~~D-~R~~g~~~~~~~~~~~~~~e~~f~~~N~ 134 (162)
T 3ehd_A 62 ADTENVLASDLLVALLDGPTIDAGVASEIGVAYAK------GIPVVALYTD-SRQQGADNHQKLDALNEIAENQFHYLNL 134 (162)
T ss_dssp HHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHT------TCCEEEECCC-GGGCCTTCHHHHHHTTSTTCCCSCCCCH
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHC------CCEEEEEEcC-cccccCCcchhhhhhHHHhhhhhhhhhH
Confidence 345678999998875 664 8999999999875 8999999764 211 101111111 1111100
Q ss_pred ---cccccceEEcCCHHHHHHHHHhh
Q 033246 71 ---PSQRSILVSAPNAKELVQKLEEY 93 (123)
Q Consensus 71 ---~~~~~~i~~~dd~ee~l~~l~~~ 93 (123)
---...=.++.|.+|+++.|+.+
T Consensus 135 ~~~G~i~~~g~~~~~~~~~~~~l~~~ 160 (162)
T 3ehd_A 135 YTVGLIKLNGRVVSSEEDLLEEIKQR 160 (162)
T ss_dssp HHHHHHHTTEEEESSHHHHHHHHHHT
T ss_pred HHhhhHHhCCeEEeCHHHHHHHHHHH
Confidence 00011226779999999999875
No 16
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=92.23 E-value=0.39 Score=33.02 Aligned_cols=63 Identities=21% Similarity=0.325 Sum_probs=38.5
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC----CHHH
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP----NAKE 85 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d----d~ee 85 (123)
..||+||. .||.||+-|.. . +.+|++++.. +.+.. ..-+.+.+.|.- ..++ ++++
T Consensus 85 ~~ad~~I~-~~G~~t~~Ea~---~------~G~P~i~~p~--~~~Q~-~na~~l~~~g~g--------~~~~~~~~~~~~ 143 (170)
T 2o6l_A 85 PKTRAFIT-HGGANGIYEAI---Y------HGIPMVGIPL--FADQP-DNIAHMKARGAA--------VRVDFNTMSSTD 143 (170)
T ss_dssp TTEEEEEE-CCCHHHHHHHH---H------HTCCEEECCC--STTHH-HHHHHHHTTTSE--------EECCTTTCCHHH
T ss_pred CCcCEEEE-cCCccHHHHHH---H------cCCCEEeccc--hhhHH-HHHHHHHHcCCe--------EEeccccCCHHH
Confidence 56777775 78889998875 2 2799999974 23332 222344444321 2222 7788
Q ss_pred HHHHHHhh
Q 033246 86 LVQKLEEY 93 (123)
Q Consensus 86 ~l~~l~~~ 93 (123)
+.+.|.+.
T Consensus 144 l~~~i~~l 151 (170)
T 2o6l_A 144 LLNALKRV 151 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777665
No 17
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=90.03 E-value=0.52 Score=38.52 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=48.3
Q ss_pred cCEEEE-cCCchhhHHHHHHHHHHHHhC-CCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHH
Q 033246 12 SDCFIA-LPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQK 89 (123)
Q Consensus 12 sDa~I~-lPGG~GTLdEl~evlt~~qlg-~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~ 89 (123)
.|++++ +|||+-..+++.+.+.-..-. .++|||++.-. |- + ..+-.+.+.+.| +...++|+++.+.
T Consensus 302 v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~-G~-~-~~~~~~~l~~~g---------ip~~~~~e~Aa~~ 369 (397)
T 3ufx_B 302 VKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVA-GT-A-EEEAKKLLEGKP---------VYMYPTSIEAAKV 369 (397)
T ss_dssp CCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEE-EE-C-HHHHHHHTTTSS---------EEECSSHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEcc-CC-C-HHHHHHHHHhCC---------CcccCCHHHHHHH
Confidence 577665 899999999999877643322 24899886543 32 1 112122222222 7899999999999
Q ss_pred HHhhcCCCCCCcccceecccccc
Q 033246 90 LEEYVPLHDGVVAKVKWEAEQVE 112 (123)
Q Consensus 90 l~~~~~~~~~~~~~~~w~~~~~~ 112 (123)
+.+. +.+..|.+..+|
T Consensus 370 ~~~l-------~~~a~w~~~~~g 385 (397)
T 3ufx_B 370 TVAM-------KGGAAWLEFAPG 385 (397)
T ss_dssp HHHS-------CCSCC-------
T ss_pred HHHH-------HHHhHHhhCCCC
Confidence 8775 334578875554
No 18
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=89.52 E-value=1.4 Score=34.82 Aligned_cols=66 Identities=11% Similarity=0.134 Sum_probs=40.3
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc---CCHH
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA---PNAK 84 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~---dd~e 84 (123)
++..||+||. .||.||+-|.. . +.+|++++.. +.+.. ..-+.+.+.|.- +.+- -+++
T Consensus 332 ll~~ad~~V~-~~G~~t~~Ea~---~------~G~P~i~~p~--~~dQ~-~na~~l~~~g~g-------~~~~~~~~~~~ 391 (441)
T 2yjn_A 332 LLPTCAATVH-HGGPGSWHTAA---I------HGVPQVILPD--GWDTG-VRAQRTQEFGAG-------IALPVPELTPD 391 (441)
T ss_dssp HGGGCSEEEE-CCCHHHHHHHH---H------TTCCEEECCC--SHHHH-HHHHHHHHHTSE-------EECCTTTCCHH
T ss_pred HHhhCCEEEE-CCCHHHHHHHH---H------hCCCEEEeCC--cccHH-HHHHHHHHcCCE-------EEcccccCCHH
Confidence 4688999886 78899977665 2 4899999964 33332 222445554421 1111 1677
Q ss_pred HHHHHHHhh
Q 033246 85 ELVQKLEEY 93 (123)
Q Consensus 85 e~l~~l~~~ 93 (123)
++.+.|++.
T Consensus 392 ~l~~~i~~l 400 (441)
T 2yjn_A 392 QLRESVKRV 400 (441)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 19
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=89.10 E-value=0.8 Score=35.43 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=25.2
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.++..||+|| ..||.||+-|.. . +.+|++++..
T Consensus 296 ~ll~~ad~~v-~~gG~~t~~Ea~---~------~G~P~v~~p~ 328 (398)
T 4fzr_A 296 AIMPACDVVV-HHGGHGTTLTCL---S------EGVPQVSVPV 328 (398)
T ss_dssp HHGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHHhhCCEEE-ecCCHHHHHHHH---H------hCCCEEecCC
Confidence 4677799988 688899976554 3 4899999853
No 20
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=88.91 E-value=1.8 Score=33.12 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=39.3
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc---CCHH
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA---PNAK 84 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~---dd~e 84 (123)
++..||+||. +||.||+-|.. . ..+|++++.. +.+.. ..-+.+.+.|.- +.+. .+++
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~---~------~G~P~v~~p~--~~dq~-~~a~~~~~~g~g-------~~~~~~~~~~~ 335 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGL---S------AGVPQLLIPK--GSVLE-APARRVADYGAA-------IALLPGEDSTE 335 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHH---H------TTCCEEECCC--SHHHH-HHHHHHHHHTSE-------EECCTTCCCHH
T ss_pred HHhhCCEEEe-CCcHHHHHHHH---H------hCCCEEEccC--cccch-HHHHHHHHCCCe-------EecCcCCCCHH
Confidence 4578998886 78889976655 3 4899999974 23332 222334444421 1111 1677
Q ss_pred HHHHHHHhh
Q 033246 85 ELVQKLEEY 93 (123)
Q Consensus 85 e~l~~l~~~ 93 (123)
++.+.+.+.
T Consensus 336 ~l~~~i~~l 344 (384)
T 2p6p_A 336 AIADSCQEL 344 (384)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777664
No 21
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=88.27 E-value=1.2 Score=32.35 Aligned_cols=39 Identities=21% Similarity=0.146 Sum_probs=32.5
Q ss_pred HHHHHHHhcCEEEEc----CCchhhHHHHHHHHHHHHhCCCCCcEEEEe
Q 033246 4 RKAEMARNSDCFIAL----PGGYGTLEELLEVITWAQLGIHDKPVGLIN 48 (123)
Q Consensus 4 RK~~m~~~sDa~I~l----PGG~GTLdEl~evlt~~qlg~~~kPiilln 48 (123)
+-...++.||++|++ .=-.||.-|+-.++.+ +|||+++.
T Consensus 74 ~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~al------gKPVv~l~ 116 (167)
T 1s2d_A 74 NDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRAM------HKPVILVP 116 (167)
T ss_dssp HHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHT------TCCEEEEE
T ss_pred HHHHHHHhCCEEEEECCCCCCCCCceeehhhHhhC------CCeEEEEE
Confidence 445568899999996 4468999999999975 89999996
No 22
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=87.36 E-value=2.4 Score=32.49 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=24.8
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.++..||+|| .+||.+|+-|. +.. .+|+|++..
T Consensus 304 ~~l~~ad~~v-~~~g~~t~~Ea---~a~------G~P~v~~p~ 336 (412)
T 3otg_A 304 ALLPHVDLVV-HHGGSGTTLGA---LGA------GVPQLSFPW 336 (412)
T ss_dssp HHGGGCSEEE-ESCCHHHHHHH---HHH------TCCEEECCC
T ss_pred HHHhcCcEEE-ECCchHHHHHH---HHh------CCCEEecCC
Confidence 4677899876 78888997554 443 899999864
No 23
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=86.73 E-value=3 Score=32.48 Aligned_cols=68 Identities=16% Similarity=0.180 Sum_probs=40.8
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE---cCCH
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS---APNA 83 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~---~dd~ 83 (123)
.++..||+|| ..||.||+-|.. .+.+|++++.. +.+. ...-+.+.+.|.- +.+ .-++
T Consensus 317 ~~l~~~d~~v-~~~G~~t~~Ea~---------~~G~P~i~~p~--~~dQ-~~na~~l~~~g~g-------~~~~~~~~~~ 376 (424)
T 2iya_A 317 DILTKASAFI-THAGMGSTMEAL---------SNAVPMVAVPQ--IAEQ-TMNAERIVELGLG-------RHIPRDQVTA 376 (424)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---------HTTCCEEECCC--SHHH-HHHHHHHHHTTSE-------EECCGGGCCH
T ss_pred HHHhhCCEEE-ECCchhHHHHHH---------HcCCCEEEecC--ccch-HHHHHHHHHCCCE-------EEcCcCCCCH
Confidence 4577899766 478889977765 24899999964 2233 2222445554421 111 1277
Q ss_pred HHHHHHHHhhc
Q 033246 84 KELVQKLEEYV 94 (123)
Q Consensus 84 ee~l~~l~~~~ 94 (123)
+++.+.|++..
T Consensus 377 ~~l~~~i~~ll 387 (424)
T 2iya_A 377 EKLREAVLAVA 387 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777776653
No 24
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=86.43 E-value=3.2 Score=32.23 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=24.1
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.++..||+|| .+||.||+-|.. . ..+|+++...
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~i~~p~ 327 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEGL---A------TATPMIAVPQ 327 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHhhccCEEE-ECCCccHHHHHH---H------hCCCEEECCC
Confidence 4577899865 588888866554 3 4899999864
No 25
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=85.84 E-value=1.5 Score=31.59 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=33.7
Q ss_pred hHHHHHHHhcCEEEEcCC--chhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 3 QRKAEMARNSDCFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 3 eRK~~m~~~sDa~I~lPG--G~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+|-..+++.||++|+..- ..||.-|+-.+..+ +|||+++-.
T Consensus 60 ~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~al------gkPV~~l~~ 102 (152)
T 4fyk_A 60 EQNLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILCLFR 102 (152)
T ss_dssp HHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHHc------CCeEEEEEe
Confidence 455678999999999743 68999999999875 899999754
No 26
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=84.05 E-value=2.8 Score=32.33 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=40.0
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHH
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKEL 86 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~ 86 (123)
.++..||++| ..||.||+-|.. . ..+|++++-. ..+.... -+.+.+.|.-..-..+ --+++++
T Consensus 309 ~ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~~~-a~~l~~~g~g~~~~~~----~~~~~~l 371 (415)
T 3rsc_A 309 KVLEQATVCV-THGGMGTLMEAL---Y------WGRPLVVVPQ--SFDVQPM-ARRVDQLGLGAVLPGE----KADGDTL 371 (415)
T ss_dssp HHHHHEEEEE-ESCCHHHHHHHH---H------TTCCEEECCC--SGGGHHH-HHHHHHHTCEEECCGG----GCCHHHH
T ss_pred HHHhhCCEEE-ECCcHHHHHHHH---H------hCCCEEEeCC--cchHHHH-HHHHHHcCCEEEcccC----CCCHHHH
Confidence 4667799855 678889976654 3 4899999843 2333222 2344444422100000 1177888
Q ss_pred HHHHHhhc
Q 033246 87 VQKLEEYV 94 (123)
Q Consensus 87 l~~l~~~~ 94 (123)
.+.+.+..
T Consensus 372 ~~~i~~ll 379 (415)
T 3rsc_A 372 LAAVGAVA 379 (415)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776653
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=83.92 E-value=2.9 Score=28.73 Aligned_cols=68 Identities=15% Similarity=0.295 Sum_probs=44.5
Q ss_pred HHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCC
Q 033246 5 KAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPN 82 (123)
Q Consensus 5 K~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd 82 (123)
...++..||++|..+ .|+|.- ++|+++ ..+|+|..+.. ..-+ ++ .......++ .+|
T Consensus 91 ~~~~~~~adi~v~ps~~e~~~~~--~~Eama------~G~PvI~~~~~----~~~e----~i-----~~~~~g~~~-~~d 148 (177)
T 2f9f_A 91 LIDLYSRCKGLLCTAKDEDFGLT--PIEAMA------SGKPVIAVNEG----GFKE----TV-----INEKTGYLV-NAD 148 (177)
T ss_dssp HHHHHHHCSEEEECCSSCCSCHH--HHHHHH------TTCCEEEESSH----HHHH----HC-----CBTTTEEEE-CSC
T ss_pred HHHHHHhCCEEEeCCCcCCCChH--HHHHHH------cCCcEEEeCCC----CHHH----Hh-----cCCCccEEe-CCC
Confidence 556788999988744 466633 577776 48999998752 1222 22 222233444 899
Q ss_pred HHHHHHHHHhhc
Q 033246 83 AKELVQKLEEYV 94 (123)
Q Consensus 83 ~ee~l~~l~~~~ 94 (123)
++++.+.|....
T Consensus 149 ~~~l~~~i~~l~ 160 (177)
T 2f9f_A 149 VNEIIDAMKKVS 160 (177)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 28
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=83.77 E-value=2.7 Score=32.01 Aligned_cols=67 Identities=10% Similarity=0.136 Sum_probs=38.7
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC----C
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP----N 82 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d----d 82 (123)
.++..||++ +..||.||+-|.. . ..+|++++-.. ..+.... -+.+.+.|.- ..++ |
T Consensus 293 ~ll~~ad~~-v~~~G~~t~~Ea~---~------~G~P~v~~p~~-~~~q~~~-a~~~~~~g~g--------~~~~~~~~~ 352 (402)
T 3ia7_A 293 SVLAHARAC-LTHGTTGAVLEAF---A------AGVPLVLVPHF-ATEAAPS-AERVIELGLG--------SVLRPDQLE 352 (402)
T ss_dssp HHHTTEEEE-EECCCHHHHHHHH---H------TTCCEEECGGG-CGGGHHH-HHHHHHTTSE--------EECCGGGCS
T ss_pred HHHhhCCEE-EECCCHHHHHHHH---H------hCCCEEEeCCC-cccHHHH-HHHHHHcCCE--------EEccCCCCC
Confidence 467778875 4678889976654 3 48999988530 2232221 2344544422 1111 6
Q ss_pred HHHHHHHHHhh
Q 033246 83 AKELVQKLEEY 93 (123)
Q Consensus 83 ~ee~l~~l~~~ 93 (123)
++++.+.+.+.
T Consensus 353 ~~~l~~~~~~l 363 (402)
T 3ia7_A 353 PASIREAVERL 363 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=82.95 E-value=3.8 Score=31.06 Aligned_cols=64 Identities=14% Similarity=0.158 Sum_probs=38.5
Q ss_pred HHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHH
Q 033246 6 AEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKE 85 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee 85 (123)
..++..||+|| +|. |++ +.|+++. .+|+|.....+-...+ ++.|. .+.+-.|+++
T Consensus 269 ~~~~~~ad~~v-~~S--~g~--~lEA~a~------G~PvI~~~~~~~~~~~-------~~~g~-------g~lv~~d~~~ 323 (376)
T 1v4v_A 269 AALMRASLLLV-TDS--GGL--QEEGAAL------GVPVVVLRNVTERPEG-------LKAGI-------LKLAGTDPEG 323 (376)
T ss_dssp HHHHHTEEEEE-ESC--HHH--HHHHHHT------TCCEEECSSSCSCHHH-------HHHTS-------EEECCSCHHH
T ss_pred HHHHHhCcEEE-ECC--cCH--HHHHHHc------CCCEEeccCCCcchhh-------hcCCc-------eEECCCCHHH
Confidence 35678899885 566 555 7788875 9999987432223332 22220 1122258888
Q ss_pred HHHHHHhhc
Q 033246 86 LVQKLEEYV 94 (123)
Q Consensus 86 ~l~~l~~~~ 94 (123)
+.+.+.+..
T Consensus 324 la~~i~~ll 332 (376)
T 1v4v_A 324 VYRVVKGLL 332 (376)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887776654
No 30
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=82.28 E-value=4 Score=31.20 Aligned_cols=67 Identities=15% Similarity=0.262 Sum_probs=40.3
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc----CCHH
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA----PNAK 84 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~----dd~e 84 (123)
+..||+|| ..||.||+.|.. . +.+|++++.. +.+... .-+.+.+.|.- ...-. .|++
T Consensus 284 l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~~-~a~~~~~~g~g------~~~~~~~~~~~~~ 344 (391)
T 3tsa_A 284 LRTCELVI-CAGGSGTAFTAT---R------LGIPQLVLPQ--YFDQFD-YARNLAAAGAG------ICLPDEQAQSDHE 344 (391)
T ss_dssp GGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC--STTHHH-HHHHHHHTTSE------EECCSHHHHTCHH
T ss_pred HhhCCEEE-eCCCHHHHHHHH---H------hCCCEEecCC--cccHHH-HHHHHHHcCCE------EecCcccccCCHH
Confidence 47889887 588889986654 3 4899999854 333322 22345554421 11111 3588
Q ss_pred HHHHHHHhhc
Q 033246 85 ELVQKLEEYV 94 (123)
Q Consensus 85 e~l~~l~~~~ 94 (123)
++.+.+.+..
T Consensus 345 ~l~~ai~~ll 354 (391)
T 3tsa_A 345 QFTDSIATVL 354 (391)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777754
No 31
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=82.15 E-value=3.5 Score=32.22 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=40.9
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHH
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELV 87 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l 87 (123)
++..+|+||. .||.||+-|.. . +.+|++++.. +.++.. .-+.+.+.|.--.-..+ .-+++++.
T Consensus 298 ~l~~~d~~v~-~~G~~t~~Ea~---~------~G~P~i~~p~--~~dQ~~-na~~l~~~g~g~~~~~~----~~~~~~l~ 360 (415)
T 1iir_A 298 LFGRVAAVIH-HGGAGTTHVAA---R------AGAPQILLPQ--MADQPY-YAGRVAELGVGVAHDGP----IPTFDSLS 360 (415)
T ss_dssp HGGGSSEEEE-CCCHHHHHHHH---H------HTCCEEECCC--STTHHH-HHHHHHHHTSEEECSSS----SCCHHHHH
T ss_pred HHhhCCEEEe-CCChhHHHHHH---H------cCCCEEECCC--CCccHH-HHHHHHHCCCcccCCcC----CCCHHHHH
Confidence 3588999886 78889987765 2 3899999964 334332 22445444421000000 12677777
Q ss_pred HHHHhh
Q 033246 88 QKLEEY 93 (123)
Q Consensus 88 ~~l~~~ 93 (123)
+.|++.
T Consensus 361 ~~i~~l 366 (415)
T 1iir_A 361 AALATA 366 (415)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777766
No 32
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=80.39 E-value=4.1 Score=31.76 Aligned_cols=69 Identities=16% Similarity=0.116 Sum_probs=41.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHH
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELV 87 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l 87 (123)
++..+|+||. .||.||+-|... +.+|++++.. +.++... -+.+.+.|.--.-..+ .-+++++.
T Consensus 299 ll~~~d~~v~-~~G~~t~~Ea~~---------~G~P~i~~p~--~~dQ~~n-a~~l~~~g~g~~~~~~----~~~~~~l~ 361 (416)
T 1rrv_A 299 LFRRVAAVIH-HGSAGTEHVATR---------AGVPQLVIPR--NTDQPYF-AGRVAALGIGVAHDGP----TPTFESLS 361 (416)
T ss_dssp HGGGSSEEEE-CCCHHHHHHHHH---------HTCCEEECCC--SBTHHHH-HHHHHHHTSEEECSSS----CCCHHHHH
T ss_pred HhccCCEEEe-cCChhHHHHHHH---------cCCCEEEccC--CCCcHHH-HHHHHHCCCccCCCCC----CCCHHHHH
Confidence 4588999887 788999888762 3899999964 3444322 2445554432100000 12677777
Q ss_pred HHHHhh
Q 033246 88 QKLEEY 93 (123)
Q Consensus 88 ~~l~~~ 93 (123)
+.+++.
T Consensus 362 ~~i~~l 367 (416)
T 1rrv_A 362 AALTTV 367 (416)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777666
No 33
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=79.04 E-value=11 Score=30.91 Aligned_cols=75 Identities=11% Similarity=0.087 Sum_probs=57.2
Q ss_pred chHHHHHHHhcCEEEEcCCc--hhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE
Q 033246 2 HQRKAEMARNSDCFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS 79 (123)
Q Consensus 2 ~eRK~~m~~~sDa~I~lPGG--~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~ 79 (123)
..|.+++.-+|+++||.=.+ -|||...-.++.. .|||+.+-.. -.++.-.--..++++| . ..
T Consensus 227 p~RNRiIagLS~~vvVvEA~~kSGsliTA~~Ale~------gR~VfavPG~-i~~~~s~G~n~LI~~G-A--------~l 290 (382)
T 3maj_A 227 PRRNRLISGASVGVAVIEAAYRSGSLITARRAADQ------GREVFAVPGS-PLDPRAAGTNDLIKQG-A--------TL 290 (382)
T ss_dssp HHHHHHHHHHCSCEEECCCCTTCTHHHHHHHHHHH------TCCEEECCCC-TTCGGGHHHHHHHHTT-C--------EE
T ss_pred HHHHHHHHHhCCceEEEecCCCCcHHHHHHHHHHh------CCcEEEEcCC-CCCcccccHHHHHHCC-C--------EE
Confidence 47999999999999998776 6999998888875 8999988643 4444433345677766 2 56
Q ss_pred cCCHHHHHHHHHh
Q 033246 80 APNAKELVQKLEE 92 (123)
Q Consensus 80 ~dd~ee~l~~l~~ 92 (123)
+.+++++++.+..
T Consensus 291 v~~~~Dil~~l~~ 303 (382)
T 3maj_A 291 ITSASDIVEAVAS 303 (382)
T ss_dssp CSSHHHHHHHHTT
T ss_pred ECCHHHHHHHhhh
Confidence 8899999998854
No 34
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=78.98 E-value=1.3 Score=34.33 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=32.5
Q ss_pred HHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCC
Q 033246 6 AEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGF 68 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gf 68 (123)
..++..||.+|. +|| +|+-|+. + .++|.+++-... ++. ..-+.+.+.|.
T Consensus 220 ~~~m~~aDlvI~-~gG-~T~~E~~---~------~g~P~i~ip~~~--~Q~-~nA~~l~~~G~ 268 (282)
T 3hbm_A 220 AKLMNESNKLII-SAS-SLVNEAL---L------LKANFKAICYVK--NQE-STATWLAKKGY 268 (282)
T ss_dssp HHHHHTEEEEEE-ESS-HHHHHHH---H------TTCCEEEECCSG--GGH-HHHHHHHHTTC
T ss_pred HHHHHHCCEEEE-CCc-HHHHHHH---H------cCCCEEEEeCCC--CHH-HHHHHHHHCCC
Confidence 456788999998 788 7988776 2 389999986432 122 22245666664
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=78.31 E-value=9.7 Score=28.49 Aligned_cols=63 Identities=13% Similarity=0.176 Sum_probs=38.2
Q ss_pred HHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHH
Q 033246 6 AEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKE 85 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee 85 (123)
..++..||+|| +|. |+. +.|+++. .+|+|..+..+-...+ ++.| .-+.+-.|+++
T Consensus 277 ~~~~~~ad~~v-~~s--g~~--~lEA~a~------G~Pvi~~~~~~~~~e~-------v~~g-------~g~~v~~d~~~ 331 (375)
T 3beo_A 277 HNVAARSYLML-TDS--GGV--QEEAPSL------GVPVLVLRDTTERPEG-------IEAG-------TLKLAGTDEET 331 (375)
T ss_dssp HHHHHTCSEEE-ECC--HHH--HHHHHHH------TCCEEECSSCCSCHHH-------HHTT-------SEEECCSCHHH
T ss_pred HHHHHhCcEEE-ECC--CCh--HHHHHhc------CCCEEEecCCCCCcee-------ecCC-------ceEEcCCCHHH
Confidence 45677899986 565 444 7888876 9999998532233332 2222 12223257888
Q ss_pred HHHHHHhh
Q 033246 86 LVQKLEEY 93 (123)
Q Consensus 86 ~l~~l~~~ 93 (123)
+.+.|...
T Consensus 332 la~~i~~l 339 (375)
T 3beo_A 332 IFSLADEL 339 (375)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777654
No 36
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=78.31 E-value=13 Score=28.47 Aligned_cols=44 Identities=30% Similarity=0.312 Sum_probs=31.3
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
.+...+.|+|+|| .|...+++.|.-..-++.=+.+.+++.+.||
T Consensus 52 ~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 95 (268)
T 3ico_A 52 AARGQALIVLTGG-GNGIALLRYLSAQAQQIEWSKVHLFWGDERY 95 (268)
T ss_dssp HHHSCEEEEECCS-HHHHHHHHHHHHHGGGSCGGGEEEEESEEEC
T ss_pred HhcCceEEEEecC-CchhHHHHHHHHHhhhhhheeeEEeeccccc
Confidence 3468899999999 4777777777653212333568888887888
No 37
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=78.13 E-value=1.7 Score=31.83 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=30.6
Q ss_pred chHHHHHHHhcCEEEEcC-Cch--hhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 2 HQRKAEMARNSDCFIALP-GGY--GTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 2 ~eRK~~m~~~sDa~I~lP-GG~--GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..|.+.|+++||++|++- |.. ||-.=+-.+-...+ .+++||.+++.
T Consensus 121 ~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~--~~~~pv~~I~~ 169 (181)
T 2nx2_A 121 KQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRRE--QDGYPIYFITM 169 (181)
T ss_dssp HHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHH--HHCCCEEEECH
T ss_pred HHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhcc--ccCCeEEEEcH
Confidence 478999999999999987 432 55443333332211 33799999973
No 38
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=77.80 E-value=4.6 Score=31.57 Aligned_cols=70 Identities=14% Similarity=0.193 Sum_probs=39.3
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHH
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKEL 86 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~ 86 (123)
.++..+|++| -.||.||..|.. + +.+|++++-. +.++.. .-+.+.+.|.-..-..+ .-+++++
T Consensus 280 ~ll~~~d~~v-~~gG~~t~~Eal---~------~GvP~v~~p~--~~dQ~~-na~~~~~~G~g~~l~~~----~~~~~~l 342 (404)
T 3h4t_A 280 VLFGRVAAVV-HHGGAGTTTAVT---R------AGAPQVVVPQ--KADQPY-YAGRVADLGVGVAHDGP----TPTVESL 342 (404)
T ss_dssp HHGGGSSEEE-ECCCHHHHHHHH---H------HTCCEEECCC--STTHHH-HHHHHHHHTSEEECSSS----SCCHHHH
T ss_pred HHHhhCcEEE-ECCcHHHHHHHH---H------cCCCEEEcCC--cccHHH-HHHHHHHCCCEeccCcC----CCCHHHH
Confidence 3456788866 677789987665 3 3899999853 333332 22445555532110000 1167777
Q ss_pred HHHHHhh
Q 033246 87 VQKLEEY 93 (123)
Q Consensus 87 l~~l~~~ 93 (123)
.+.+.+.
T Consensus 343 ~~ai~~l 349 (404)
T 3h4t_A 343 SAALATA 349 (404)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 39
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=77.31 E-value=17 Score=27.42 Aligned_cols=44 Identities=30% Similarity=0.338 Sum_probs=31.5
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
.+...+.|+|+|| .|...+++.|.-..-++.=..+.+++.+.||
T Consensus 36 ~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (251)
T 3tx2_A 36 AERGKAMIVLTGG-GTGIALLKHLRDVASGLDWTNVHVFWGDDRY 79 (251)
T ss_dssp HHHSCEEEEECCS-HHHHHHHHHHHHHHTTSCGGGEEEEESEEES
T ss_pred HhCCCEEEEECCC-chHHHHHHHHHhhccCCCCceeEEEeeeecc
Confidence 4478899999999 5777777777653322333568888888887
No 40
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=73.34 E-value=19 Score=27.05 Aligned_cols=44 Identities=25% Similarity=0.204 Sum_probs=31.4
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
.+...+.|+|+|| .|...+++.|.-..-++.=+.+.+++.+.||
T Consensus 36 ~~~~~~~l~LsgG-stP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (248)
T 3oc6_A 36 GERGQATIVLTGG-GTGIGLLKRVRERSGEIDWSKVHIYWGDERF 79 (248)
T ss_dssp HHHSCEEEEECCS-HHHHHHHHHHHHTGGGSCGGGEEEEESEEEC
T ss_pred HhCCCEEEEECCC-ccHHHHHHHHHhhccCCCcceEEEEEeeecc
Confidence 4478899999999 5778888877653212233568888887777
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=72.97 E-value=3.1 Score=32.09 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=24.5
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.++..||+|| ..||.||+-|. +.. .+|++++..
T Consensus 295 ~ll~~ad~~v-~~~G~~t~~Ea---l~~------G~P~v~~p~ 327 (398)
T 3oti_A 295 TLLRTCTAVV-HHGGGGTVMTA---IDA------GIPQLLAPD 327 (398)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHH---HHH------TCCEEECCC
T ss_pred HHHhhCCEEE-ECCCHHHHHHH---HHh------CCCEEEcCC
Confidence 4567799877 68999997554 443 899999743
No 42
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=69.21 E-value=13 Score=27.96 Aligned_cols=64 Identities=13% Similarity=0.173 Sum_probs=37.2
Q ss_pred HHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHH
Q 033246 5 KAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAK 84 (123)
Q Consensus 5 K~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~e 84 (123)
...++..||+||. |. |+. +.|+++. .+|+|..+..+-...+ ++.| .-+.+-.|++
T Consensus 276 ~~~~~~~ad~~v~-~S--g~~--~lEA~a~------G~PvI~~~~~~~~~e~-------v~~g-------~g~lv~~d~~ 330 (384)
T 1vgv_A 276 FVWLMNHAWLILT-DS--GGI--QEEAPSL------GKPVLVMRDTTERPEA-------VTAG-------TVRLVGTDKQ 330 (384)
T ss_dssp HHHHHHHCSEEEE-SS--STG--GGTGGGG------TCCEEEESSCCSCHHH-------HHHT-------SEEEECSSHH
T ss_pred HHHHHHhCcEEEE-CC--cch--HHHHHHc------CCCEEEccCCCCcchh-------hhCC-------ceEEeCCCHH
Confidence 3456788999765 54 222 5677754 8999999752333332 2222 1122323888
Q ss_pred HHHHHHHhh
Q 033246 85 ELVQKLEEY 93 (123)
Q Consensus 85 e~l~~l~~~ 93 (123)
++.+.|.+.
T Consensus 331 ~la~~i~~l 339 (384)
T 1vgv_A 331 RIVEEVTRL 339 (384)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887777654
No 43
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=68.75 E-value=3.3 Score=31.17 Aligned_cols=53 Identities=28% Similarity=0.379 Sum_probs=34.9
Q ss_pred HHHH-hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCC-ccHHHHHHHHHHHHcCCC
Q 033246 7 EMAR-NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDG-YYNSLLNFIDKAVDDGFI 69 (123)
Q Consensus 7 ~m~~-~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~g-f~~~l~~~l~~~~~~gfi 69 (123)
.++. .||++|.= ||.||+-|+. ...+|.|++-... ..++=...-+.+.+.|..
T Consensus 127 ~~l~~~AdlvIsh-aGagTv~Eal---------~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 127 SIIRDYSDLVISH-AGTGSILDSL---------RLNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp HHHHHHCSCEEES-SCHHHHHHHH---------HTTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred HHHHhcCCEEEEC-CcHHHHHHHH---------HhCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 4567 88887765 8999998877 2479999986421 123333334567777754
No 44
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=68.70 E-value=7.1 Score=30.34 Aligned_cols=38 Identities=24% Similarity=0.374 Sum_probs=26.0
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+..|.+|+ -||=||+.|+...+.-.. ...+.|+.+++.
T Consensus 81 ~~~d~vvv-~GGDGTl~~v~~~l~~~~-~~~~~plgiiP~ 118 (332)
T 2bon_A 81 FGVATVIA-GGGDGTINEVSTALIQCE-GDDIPALGILPL 118 (332)
T ss_dssp HTCSEEEE-EESHHHHHHHHHHHHHCC-SSCCCEEEEEEC
T ss_pred cCCCEEEE-EccchHHHHHHHHHhhcc-cCCCCeEEEecC
Confidence 34565554 599999999999886321 134678888855
No 45
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=67.50 E-value=3.1 Score=27.84 Aligned_cols=64 Identities=14% Similarity=0.212 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE-----cCCHHHHHHHHHhhcCCCC
Q 033246 24 TLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS-----APNAKELVQKLEEYVPLHD 98 (123)
Q Consensus 24 TLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~-----~dd~ee~l~~l~~~~~~~~ 98 (123)
|=+|+.+.+.-..-.. ...+.+.+.++..+++.++ .|+-.++|+. -++|+++++.+++|++..+
T Consensus 11 Te~Efi~lv~~I~~~~-------~~~E~e~d~ll~~fe~ite----HP~gSDLIfyP~~~~e~SPEgIv~~IKeWRa~nG 79 (94)
T 3u43_A 11 TEAEFLEFVKKICRAE-------GATEEDDNKLVREFERLTE----HPDGSDLIYYPRDDREDSPEGIVKEIKEWRAANG 79 (94)
T ss_dssp BHHHHHHHHHHHHHTC-------CSSHHHHHHHHHHHHHHHC----CTTTTHHHHSCCTTSCSSHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHhCC----CCCccCeeeeCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 4466666665322211 1345678888888877663 3455778877 3689999999999976654
No 46
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=67.35 E-value=28 Score=25.69 Aligned_cols=68 Identities=25% Similarity=0.308 Sum_probs=41.6
Q ss_pred HHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE--c
Q 033246 5 KAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS--A 80 (123)
Q Consensus 5 K~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~--~ 80 (123)
...++..||++|.-. .|+|+- ++|+++. .+|+|..+..|.-+ ++. . ...| +.+ .
T Consensus 264 ~~~~~~~ad~~v~ps~~e~~~~~--~~Ea~a~------G~Pvi~~~~~~~~e-~i~---~-~~~g---------~~~~~~ 321 (374)
T 2iw1_A 264 VSELMAAADLLLHPAYQEAAGIV--LLEAITA------GLPVLTTAVCGYAH-YIA---D-ANCG---------TVIAEP 321 (374)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHH--HHHHHHH------TCCEEEETTSTTTH-HHH---H-HTCE---------EEECSS
T ss_pred HHHHHHhcCEEEeccccCCcccH--HHHHHHC------CCCEEEecCCCchh-hhc---c-CCce---------EEeCCC
Confidence 345678899987643 355553 6777765 89999998755432 221 1 1112 222 3
Q ss_pred CCHHHHHHHHHhhc
Q 033246 81 PNAKELVQKLEEYV 94 (123)
Q Consensus 81 dd~ee~l~~l~~~~ 94 (123)
.|++++.+.|.+..
T Consensus 322 ~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 322 FSQEQLNEVLRKAL 335 (374)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 48888888887653
No 47
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=63.99 E-value=32 Score=25.47 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=25.2
Q ss_pred HHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCc
Q 033246 6 AEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGY 52 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf 52 (123)
..++..||++|. |+|-+|+- |+++. .+|+|..+..|.
T Consensus 249 ~~~~~~ad~~v~-~sg~~~~~---EAma~------G~Pvi~~~~~g~ 285 (364)
T 1f0k_A 249 AAAYAWADVVVC-RSGALTVS---EIAAA------GLPALFVPFQHK 285 (364)
T ss_dssp HHHHHHCSEEEE-CCCHHHHH---HHHHH------TCCEEECCCCCT
T ss_pred HHHHHhCCEEEE-CCchHHHH---HHHHh------CCCEEEeeCCCC
Confidence 456788998765 55555544 44543 899999987654
No 48
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=63.89 E-value=9.7 Score=30.13 Aligned_cols=49 Identities=22% Similarity=0.291 Sum_probs=36.4
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||.= |.=||+|-...++++- ..+|||||.+.- --.|...+++..
T Consensus 79 ~~dG~VItH-GTDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 132 (326)
T 1nns_A 79 KTDGFVITH-GTDTMEETAYFLDLTV--KCDKPVVMVGAMRPSTSMSADGPFNLYNA 132 (326)
T ss_dssp GCSEEEEEC-CSSSHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred cCCcEEEEc-CchhHHHHHHHHHHhc--CCCCCEEEeCCCCCCcCCCCchHHHHHHH
Confidence 349999985 6899999999999865 458999998762 234455665553
No 49
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=63.03 E-value=8.8 Score=28.66 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=32.4
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
.+.+...+.|+|+|| .|...+++.|.- -++.=+.+.+++.+.||
T Consensus 29 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~i~w~~v~~f~~DEr~ 72 (232)
T 3lhi_A 29 ALDEKGGAVLAVSGG-RSPIAFFNALSQ--KDLDWKNVGITLADERI 72 (232)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHT--SCCCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEeCC-CCHHHHHHHHHh--cCCCchheEEEEeeecc
Confidence 345678899999999 578888887762 23333678888888887
No 50
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=61.98 E-value=28 Score=27.52 Aligned_cols=65 Identities=17% Similarity=0.204 Sum_probs=41.8
Q ss_pred HHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc-CCH
Q 033246 5 KAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA-PNA 83 (123)
Q Consensus 5 K~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~-dd~ 83 (123)
...++..||++|.=.||+ + .|+..+ ++|++.++...-+.. .++.|.. ..+ .|+
T Consensus 276 ~~~l~~~adlvvt~SGgv-~----~EA~al------G~Pvv~~~~~ter~e-------~v~~G~~--------~lv~~d~ 329 (385)
T 4hwg_A 276 YVKLQMNAFCILSDSGTI-T----EEASIL------NLPALNIREAHERPE-------GMDAGTL--------IMSGFKA 329 (385)
T ss_dssp HHHHHHHCSEEEECCTTH-H----HHHHHT------TCCEEECSSSCSCTH-------HHHHTCC--------EECCSSH
T ss_pred HHHHHHhCcEEEECCccH-H----HHHHHc------CCCEEEcCCCccchh-------hhhcCce--------EEcCCCH
Confidence 345788999999777763 2 455554 899999976422332 2333422 334 489
Q ss_pred HHHHHHHHhhcC
Q 033246 84 KELVQKLEEYVP 95 (123)
Q Consensus 84 ee~l~~l~~~~~ 95 (123)
+++.+.+.....
T Consensus 330 ~~i~~ai~~ll~ 341 (385)
T 4hwg_A 330 ERVLQAVKTITE 341 (385)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999988887643
No 51
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=61.85 E-value=27 Score=25.94 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=43.4
Q ss_pred HHHHHHHhcCEEEEcC---------CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccc
Q 033246 4 RKAEMARNSDCFIALP---------GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQR 74 (123)
Q Consensus 4 RK~~m~~~sDa~I~lP---------GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~ 74 (123)
....++..||++|..- .|+|+ =++|+++. .+|+|..+..+. .. ++... .
T Consensus 265 ~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~--~~~Ea~a~------G~PvI~~~~~~~-~e------------~i~~~-~ 322 (394)
T 3okp_A 265 DMINTLAAADIFAMPARTRGGGLDVEGLGI--VYLEAQAC------GVPVIAGTSGGA-PE------------TVTPA-T 322 (394)
T ss_dssp HHHHHHHHCSEEEECCCCBGGGTBCCSSCH--HHHHHHHT------TCCEEECSSTTG-GG------------GCCTT-T
T ss_pred HHHHHHHhCCEEEecCccccccccccccCc--HHHHHHHc------CCCEEEeCCCCh-HH------------HHhcC-C
Confidence 3455778899988732 55664 36677764 899999876532 22 12222 2
Q ss_pred cceEEcCCHHHHHHHHHhhcC
Q 033246 75 SILVSAPNAKELVQKLEEYVP 95 (123)
Q Consensus 75 ~~i~~~dd~ee~l~~l~~~~~ 95 (123)
..++-.+|++++.+.|.....
T Consensus 323 g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 323 GLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp EEECCTTCHHHHHHHHHHHHT
T ss_pred ceEeCCCCHHHHHHHHHHHHh
Confidence 233333589999888877643
No 52
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=61.07 E-value=16 Score=28.67 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=38.4
Q ss_pred HHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHH
Q 033246 5 KAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAK 84 (123)
Q Consensus 5 K~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~e 84 (123)
...++..||++|. |-| |+. .|++++ .+|+|+.+..+-+.. +++.|. .+.+-.|++
T Consensus 301 ~~~l~~~ad~vv~-~SG-g~~---~EA~a~------G~PvV~~~~~~~~~e-------~v~~G~-------~~lv~~d~~ 355 (396)
T 3dzc_A 301 FVYLMDRAHIILT-DSG-GIQ---EEAPSL------GKPVLVMRETTERPE-------AVAAGT-------VKLVGTNQQ 355 (396)
T ss_dssp HHHHHHHCSEEEE-SCS-GGG---TTGGGG------TCCEEECCSSCSCHH-------HHHHTS-------EEECTTCHH
T ss_pred HHHHHHhcCEEEE-CCc-cHH---HHHHHc------CCCEEEccCCCcchH-------HHHcCc-------eEEcCCCHH
Confidence 4467889999754 444 544 444543 899999843344432 233331 123334788
Q ss_pred HHHHHHHhhc
Q 033246 85 ELVQKLEEYV 94 (123)
Q Consensus 85 e~l~~l~~~~ 94 (123)
++.+.+....
T Consensus 356 ~l~~ai~~ll 365 (396)
T 3dzc_A 356 QICDALSLLL 365 (396)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 53
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=61.06 E-value=11 Score=28.23 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=32.4
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
.+.+...+.|+|+|| .|...+++.|.- -++.=+.+.+++.+.||
T Consensus 32 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~ 75 (233)
T 3nwp_A 32 AVDARGKASLVVSGG-STPLKLFQLLSM--KSIDWSDVYITLADERW 75 (233)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHH--CCSCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEcCC-CCHHHHHHHHHh--cCCChhHeEEEeCeecc
Confidence 345678899999999 577777777763 23333678888888887
No 54
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=60.18 E-value=31 Score=25.15 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=26.9
Q ss_pred cCEEEEcCCchhhHHHHHHHHHHH--HhCCCCCcEEEEeCCCcc
Q 033246 12 SDCFIALPGGYGTLEELLEVITWA--QLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt~~--qlg~~~kPiilln~~gf~ 53 (123)
.+..|+++|| .|+.++++.+.-. +-+..-+.+-+++.++||
T Consensus 28 ~~~~i~lsgG-~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~ 70 (242)
T 2bkx_A 28 PDAVLGLATG-GTPEGTYRQLIRLHQTENLSFQNITTVNLDEYA 70 (242)
T ss_dssp TTCEEEECCS-STTHHHHHHHHHHHHHSCCCCTTCEEEESEEET
T ss_pred CCeEEEECCC-CCHHHHHHHHHHHhhccCCChhheEEEeCcccc
Confidence 4678999988 6777787777532 112334556677666776
No 55
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=59.50 E-value=28 Score=27.32 Aligned_cols=73 Identities=12% Similarity=0.130 Sum_probs=51.0
Q ss_pred chHHHHHHHhcCEEEEcCCc--hhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEE
Q 033246 2 HQRKAEMARNSDCFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVS 79 (123)
Q Consensus 2 ~eRK~~m~~~sDa~I~lPGG--~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~ 79 (123)
..|.+++.-+||++||.--+ -|||.=.-.++. ..|||..+-.. ..++.-+--..++++| . ..
T Consensus 206 p~RNRiIagLS~~~vVvEA~~~SGsliTA~~Ale------~gR~VfavPG~-i~~~~s~G~n~LI~~G-A--------~l 269 (288)
T 3uqz_A 206 PARNRIIAGLCRGVIVAEAKMRSGSLITCERAME------EGRDVFAIPGS-ILDGLSDGCHHLIQEG-A--------KL 269 (288)
T ss_dssp HHHHHHHHHHCSEEEEESCCTTCHHHHHHHHHHH------TTCEEEECCCC-SSSSTTHHHHHHHHTT-C--------EE
T ss_pred HHHHHHHHHcCCeEEEEecCCCChHHHHHHHHHH------cCCeEEEECCC-CCCccchHHHHHHHCC-C--------EE
Confidence 46999999999999998665 577765555554 37899887542 3444333334567666 3 56
Q ss_pred cCCHHHHHHHH
Q 033246 80 APNAKELVQKL 90 (123)
Q Consensus 80 ~dd~ee~l~~l 90 (123)
+.+++|+++.+
T Consensus 270 v~~~~Dil~el 280 (288)
T 3uqz_A 270 VTSGQDVLAEF 280 (288)
T ss_dssp CSSHHHHHHHC
T ss_pred ECCHHHHHHHh
Confidence 78999998876
No 56
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=59.36 E-value=11 Score=28.94 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=26.0
Q ss_pred hcCEEEEcCCch-hhHHHHHHHHHHHHhCCCCCcEEEEeCCCc
Q 033246 11 NSDCFIALPGGY-GTLEELLEVITWAQLGIHDKPVGLINVDGY 52 (123)
Q Consensus 11 ~sDa~I~lPGG~-GTLdEl~evlt~~qlg~~~kPiilln~~gf 52 (123)
.+|++|||.||. +.+++..+.+.- +. .|+++-+..|.
T Consensus 36 ~~D~IVVLG~~~~~Rl~~A~~L~~~---g~--~~lIvSGG~g~ 73 (266)
T 3ca8_A 36 QADCVILAGNAVMPTIDAACKIARD---QQ--IPLLISGGIGH 73 (266)
T ss_dssp CCSEEEEESCCCHHHHHHHHHHHHH---HT--CCEEEECCSST
T ss_pred CCCEEEECCCCchHHHHHHHHHHHc---CC--CcEEEECCCCC
Confidence 589999999996 677776666632 22 37887776554
No 57
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=59.34 E-value=4.8 Score=30.17 Aligned_cols=79 Identities=16% Similarity=0.254 Sum_probs=51.4
Q ss_pred cCEEEEcCCchhhHHHHHHHHH-----H---HHhCCCCCcEEEEeCCCccHHH-HHHHHHHHHcCC--CCcccccceEEc
Q 033246 12 SDCFIALPGGYGTLEELLEVIT-----W---AQLGIHDKPVGLINVDGYYNSL-LNFIDKAVDDGF--ISPSQRSILVSA 80 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt-----~---~qlg~~~kPiilln~~gf~~~l-~~~l~~~~~~gf--i~~~~~~~i~~~ 80 (123)
+|++||.|=..+|+.-+..=++ . ..++ .++|+++.-.+-+..+. .+.+..+.+.|. +++ ....+.--
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~Lk-~~~plvl~Paem~~~~~~~~Nm~~L~~~G~~iipp-~~g~ya~p 172 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVALK-ERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPA-APGFYHQP 172 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHH-HTCCEEEEECCSSCCHHHHHHHHHHHHHTCEECCS-CCCCTTCC
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHHh-cCCcEEEEEcccccCHHHHHHHHHHHHCCCEEeCC-CcccccCC
Confidence 8999999999999988753111 1 1121 37899999775344432 344556677674 344 44445567
Q ss_pred CCHHHHHHHHHh
Q 033246 81 PNAKELVQKLEE 92 (123)
Q Consensus 81 dd~ee~l~~l~~ 92 (123)
.++||+++++-.
T Consensus 173 ~~iediv~~vv~ 184 (209)
T 3zqu_A 173 QSVEDLVDFVVA 184 (209)
T ss_dssp CSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 889999887744
No 58
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=57.97 E-value=48 Score=24.74 Aligned_cols=68 Identities=24% Similarity=0.337 Sum_probs=41.5
Q ss_pred HHHHHHhcCEEEEc---CCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 5 KAEMARNSDCFIAL---PGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 5 K~~m~~~sDa~I~l---PGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
...++..||++|.. ..|+|+ =++|+++. .+|+|..+.. .+-+ +++.| ....+.-.+
T Consensus 276 ~~~~~~~adv~v~ps~~~e~~~~--~~~Ea~a~------G~PvI~~~~~----~~~e----~i~~~-----~~g~~~~~~ 334 (406)
T 2gek_A 276 KASAMRSADVYCAPHLGGESFGI--VLVEAMAA------GTAVVASDLD----AFRR----VLADG-----DAGRLVPVD 334 (406)
T ss_dssp HHHHHHHSSEEEECCCSCCSSCH--HHHHHHHH------TCEEEECCCH----HHHH----HHTTT-----TSSEECCTT
T ss_pred HHHHHHHCCEEEecCCCCCCCch--HHHHHHHc------CCCEEEecCC----cHHH----HhcCC-----CceEEeCCC
Confidence 35678899998875 335564 37777775 8999988752 2222 23221 112222237
Q ss_pred CHHHHHHHHHhh
Q 033246 82 NAKELVQKLEEY 93 (123)
Q Consensus 82 d~ee~l~~l~~~ 93 (123)
|++++.+.|.+.
T Consensus 335 d~~~l~~~i~~l 346 (406)
T 2gek_A 335 DADGMAAALIGI 346 (406)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 888888877665
No 59
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=57.54 E-value=13 Score=29.40 Aligned_cols=49 Identities=20% Similarity=0.209 Sum_probs=36.5
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||.= |.=||+|-...++++- . .+|||||.+.- --.|...+++..
T Consensus 82 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 82 SVNGVVITH-GTDTMEETAFFLNLVV-H-TDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp TCCEEEEEC-CGGGHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEec-CcchHHHHHHHHHHHc-C-CCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 368999985 6899999999998753 3 68999999762 234556666554
No 60
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=56.55 E-value=32 Score=25.60 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=28.8
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
...+.|+|+|| .|...+++.+.- .+..=+-+.+++.+.||
T Consensus 44 ~~~~~l~LsgG-sTp~~ly~~L~~--~~i~w~~v~~f~~DEr~ 83 (232)
T 1vl1_A 44 KDKIFVVLAGG-RTPLPVYEKLAE--QKFPWNRIHFFLSDERY 83 (232)
T ss_dssp CSCEEEEECCS-TTHHHHHHHHTT--SCCCGGGEEEEESEEES
T ss_pred CCCeEEEEcCC-ccHHHHHHHHHH--cCCChhHEEEEeCeEee
Confidence 56789999999 788888888762 22323567777777776
No 61
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=55.14 E-value=20 Score=27.85 Aligned_cols=68 Identities=26% Similarity=0.169 Sum_probs=40.7
Q ss_pred HHHHHhcCEEEEcC---C-chhhHHHHHHHHHHHHhCCCCCcEEEE-eCCCccHHHHHHHHHHHHcCCCCcccccceEEc
Q 033246 6 AEMARNSDCFIALP---G-GYGTLEELLEVITWAQLGIHDKPVGLI-NVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA 80 (123)
Q Consensus 6 ~~m~~~sDa~I~lP---G-G~GTLdEl~evlt~~qlg~~~kPiill-n~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~ 80 (123)
..+...||++++.| + |--+ +.|+++ ..+|||.- +..| +..+.+ .+.+.|+ +..+
T Consensus 272 ~~~y~~aDv~vl~ss~~e~gg~~---~lEAmA------~G~PVI~~~~~~~-~~e~~~---~~~~~G~--------l~~~ 330 (374)
T 2xci_A 272 KELYPVGKIAIVGGTFVNIGGHN---LLEPTC------WGIPVIYGPYTHK-VNDLKE---FLEKEGA--------GFEV 330 (374)
T ss_dssp HHHGGGEEEEEECSSSSSSCCCC---CHHHHT------TTCCEEECSCCTT-SHHHHH---HHHHTTC--------EEEC
T ss_pred HHHHHhCCEEEECCcccCCCCcC---HHHHHH------hCCCEEECCCccC-hHHHHH---HHHHCCC--------EEEe
Confidence 45677889887743 2 2233 566665 48999963 2222 344333 2334443 3667
Q ss_pred CCHHHHHHHHHhhc
Q 033246 81 PNAKELVQKLEEYV 94 (123)
Q Consensus 81 dd~ee~l~~l~~~~ 94 (123)
+|++++.+.|....
T Consensus 331 ~d~~~La~ai~~ll 344 (374)
T 2xci_A 331 KNETELVTKLTELL 344 (374)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 89999888887764
No 62
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=54.86 E-value=14 Score=29.22 Aligned_cols=49 Identities=20% Similarity=0.252 Sum_probs=36.2
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||+= |.=||+|-...++++- . .+|||||.+.- --.|...+++..
T Consensus 85 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 138 (327)
T 1o7j_A 85 DVDGVVITH-GTDTVEESAYFLHLTV-K-SDKPVVFVAAMRPATAISADGPMNLLEA 138 (327)
T ss_dssp TCCEEEEEC-CSTTHHHHHHHHHHHC-C-CCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEec-CchhHHHHHHHHHHHh-C-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 368999985 6899999999998754 3 68999998762 234455665553
No 63
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=54.17 E-value=7.3 Score=30.29 Aligned_cols=34 Identities=26% Similarity=0.199 Sum_probs=24.1
Q ss_pred HHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 6 AEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..++..||.+|. .+|.+|+-|+. +. .+|+|++..
T Consensus 247 ~~~l~~aDlvI~-raG~~Tv~E~~---a~------G~P~Ilip~ 280 (365)
T 3s2u_A 247 AAAYAWADLVIC-RAGALTVSELT---AA------GLPAFLVPL 280 (365)
T ss_dssp HHHHHHCSEEEE-CCCHHHHHHHH---HH------TCCEEECC-
T ss_pred hhhhccceEEEe-cCCcchHHHHH---Hh------CCCeEEecc
Confidence 346788998775 55689987765 33 899998753
No 64
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=54.16 E-value=16 Score=28.96 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=36.9
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
+..|+|||+= |.=||+|-...++++-. ..+|||||.+.- --.|...+++..
T Consensus 72 ~~~dG~VItH-GTDTmeeTA~~Ls~ll~-~~~kPVVlTGAqrP~~~~~sDg~~NL~~A 127 (328)
T 1wls_A 72 WEYDGIVITH-GTDTMAYSASMLSFMLR-NPPIPIVLTGSMLPITEKNSDAPFNLRTA 127 (328)
T ss_dssp TTCSEEEEEC-CGGGHHHHHHHHHHHEE-SCSSEEEEECCSSCTTSSSCSHHHHHHHH
T ss_pred ccCCeEEEEc-CCchHHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCCchHHHHHHH
Confidence 3578999985 68999999999985333 358999998862 245556666654
No 65
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=53.82 E-value=13 Score=26.56 Aligned_cols=12 Identities=25% Similarity=0.371 Sum_probs=8.6
Q ss_pred HHhcCEEEEcCCc
Q 033246 9 ARNSDCFIALPGG 21 (123)
Q Consensus 9 ~~~sDa~I~lPGG 21 (123)
++.+|++|+ |||
T Consensus 38 l~~~D~lil-PG~ 49 (211)
T 4gud_A 38 VLAADKLFL-PGV 49 (211)
T ss_dssp HHHCSEEEE-CCC
T ss_pred HhCCCEEEE-CCC
Confidence 466898765 986
No 66
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=52.87 E-value=30 Score=25.10 Aligned_cols=46 Identities=22% Similarity=0.184 Sum_probs=31.7
Q ss_pred chHHHHHHHhcCEEEEcC-CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCC
Q 033246 2 HQRKAEMARNSDCFIALP-GGYGTLEELLEVITWAQLGIHDKPVGLINVDG 51 (123)
Q Consensus 2 ~eRK~~m~~~sDa~I~lP-GG~GTLdEl~evlt~~qlg~~~kPiilln~~g 51 (123)
..|...-++-||+.++|- |..-.=.++...++. .|.||+.+++.+.
T Consensus 64 ~~Rt~~NV~DSDgTLI~~~g~lsGGT~lT~~~a~----~~~KP~l~i~l~~ 110 (158)
T 3imk_A 64 SKRTEKNVLDSDGTLIISHGILKGGSALTEFFAE----QYKKPCLHIDLDR 110 (158)
T ss_dssp HHHHHHHHHTSSEEEEEESSSCCHHHHHHHHHHH----HTTCCEEEEETTT
T ss_pred HHHHHHhhhhcCeEEEEecCCCCCchHHHHHHHH----HhCCCEEEEeccc
Confidence 468889999999965554 765333334333332 5799999999864
No 67
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=52.82 E-value=33 Score=24.58 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=26.9
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+.....|++|+.|......++..+.+.. .+.|+|+++.
T Consensus 57 l~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 94 (291)
T 3l49_A 57 LIAQKPDAIIEQLGNLDVLNPWLQKIND-----AGIPLFTVDT 94 (291)
T ss_dssp HHHHCCSEEEEESSCHHHHHHHHHHHHH-----TTCCEEEESC
T ss_pred HHHcCCCEEEEeCCChhhhHHHHHHHHH-----CCCcEEEecC
Confidence 3456789999999876666676665542 4678888775
No 68
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=52.73 E-value=13 Score=27.74 Aligned_cols=43 Identities=14% Similarity=0.269 Sum_probs=31.9
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
+.+...+.|+|+|| .|...+++.|.- -++.=+.+.+++.+.||
T Consensus 29 i~~~~~~~l~LsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~ 71 (226)
T 3lwd_A 29 LAKRERALLVVSGG-STPKPFFTSLAA--KALPWARVDVTLADERW 71 (226)
T ss_dssp HTTSSCEEEEECCS-STTHHHHHHHHT--SCSCGGGEEEEESEEES
T ss_pred HHhCCCEEEEEcCC-CCHHHHHHHHHh--cCCCchhEEEEEeeecc
Confidence 34567899999999 588888888863 22333678888888888
No 69
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=51.59 E-value=5.5 Score=32.99 Aligned_cols=16 Identities=6% Similarity=0.084 Sum_probs=13.0
Q ss_pred hcCEEEEcCCchhhHH
Q 033246 11 NSDCFIALPGGYGTLE 26 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLd 26 (123)
.=.|+||+|||+||=-
T Consensus 398 ~~~~~vVC~~GigtS~ 413 (485)
T 3sqn_A 398 TMTAYFLFQGEPAWKA 413 (485)
T ss_dssp SEEEEEECCSCHHHHH
T ss_pred cceEEEECCCchhHHH
Confidence 3468999999999943
No 70
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=51.56 E-value=15 Score=29.05 Aligned_cols=49 Identities=22% Similarity=0.201 Sum_probs=36.1
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||.= |.=||+|-...++++- . .+|||||.+.- --.|...+++..
T Consensus 85 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 138 (332)
T 2wlt_A 85 RIQGVVITH-GTDTLEESAYFLNLVL-H-STKPVVLVGAMRNASSLSADGALNLYEA 138 (332)
T ss_dssp TCCEEEEEC-CSSSHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEec-CchhHHHHHHHHHHHh-C-CCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 368999985 6899999999998754 3 68999998762 234555665553
No 71
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=51.45 E-value=25 Score=23.76 Aligned_cols=69 Identities=20% Similarity=0.212 Sum_probs=41.9
Q ss_pred HHHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 4 RKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 4 RK~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
....++..||++|... .|+|+- ++|+++. .+|+|..+.. .+-+ ++ ......+.-.+
T Consensus 108 ~~~~~~~~ad~~l~ps~~e~~~~~--~~Ea~a~------G~PvI~~~~~----~~~e----~~------~~~~g~~~~~~ 165 (200)
T 2bfw_A 108 FVRELYGSVDFVIIPSYFEPFGLV--ALEAMCL------GAIPIASAVG----GLRD----II------TNETGILVKAG 165 (200)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHH--HHHHHHT------TCEEEEESCH----HHHH----HC------CTTTCEEECTT
T ss_pred HHHHHHHHCCEEEECCCCCCccHH--HHHHHHC------CCCEEEeCCC----ChHH----Hc------CCCceEEecCC
Confidence 3456778899988743 244544 6777764 8999988753 2222 11 12223333345
Q ss_pred CHHHHHHHHHhhc
Q 033246 82 NAKELVQKLEEYV 94 (123)
Q Consensus 82 d~ee~l~~l~~~~ 94 (123)
|++++.+.|.+..
T Consensus 166 ~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 166 DPGELANAILKAL 178 (200)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8999988887764
No 72
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=50.97 E-value=33 Score=25.05 Aligned_cols=86 Identities=16% Similarity=0.197 Sum_probs=55.7
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHH-----HHHHhCCCCCcEEEEeC--CCccHH--HHHHHHHHHHcC--CCCcccccce
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVI-----TWAQLGIHDKPVGLINV--DGYYNS--LLNFIDKAVDDG--FISPSQRSIL 77 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evl-----t~~qlg~~~kPiilln~--~gf~~~--l~~~l~~~~~~g--fi~~~~~~~i 77 (123)
...+|++||.|=-.+|+.-+.-=+ +..-+ ..++|+++.-. ...|.. ..+.++.+.+.| ++++.....+
T Consensus 79 ~~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~-a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f 157 (194)
T 1p3y_1 79 GRWADIYCIIPATANILGQTANGVAMNLVATTVL-AHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAF 157 (194)
T ss_dssp HHHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHH-HSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC--
T ss_pred cccCCEEEEeCCCHHHHHHHHhhccCCHHHHHHH-HcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCccc
Confidence 467999999999999998875311 11111 15799999854 135554 244566777777 4555554222
Q ss_pred ----------EEcCCHHHHHHHHHhhcC
Q 033246 78 ----------VSAPNAKELVQKLEEYVP 95 (123)
Q Consensus 78 ----------~~~dd~ee~l~~l~~~~~ 95 (123)
.-..+++++++.+.+...
T Consensus 158 ~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 158 EIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp ----------CBCCCHHHHHHHHHHHCC
T ss_pred ccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 356899999999987643
No 73
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=49.62 E-value=25 Score=25.02 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=20.9
Q ss_pred EEEcCCchhhHHHHH---HHHHHHH--hCCCCCcEEEEe
Q 033246 15 FIALPGGYGTLEELL---EVITWAQ--LGIHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~q--lg~~~kPiilln 48 (123)
.|++|||.+..+.+. .+..|.+ ....+||+...-
T Consensus 76 ~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC 114 (194)
T 4gdh_A 76 IAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMIC 114 (194)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEG
T ss_pred EEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeec
Confidence 588899987665543 2334433 234568887765
No 74
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=49.45 E-value=22 Score=29.53 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=37.4
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||+= |.=||+|-...++++- ..+|||||.+.- --.|...+++..
T Consensus 167 ~~DG~VItH-GTDTMeeTA~~Lsl~l--~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 220 (435)
T 2d6f_A 167 GADGVVVAH-GTDTMHYTSAALSFML--RTPVPVVFTGAQRSSDRPSSDASLNIQCS 220 (435)
T ss_dssp TCSEEEEEC-CTTTHHHHHHHHHHHE--ECSSCEEEECCSSCTTSTTCTHHHHHHHH
T ss_pred CCCeEEEEc-CcchHHHHHHHHHHHh--CCCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 579999985 6899999999999875 458999998862 234556666554
No 75
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=49.05 E-value=16 Score=28.99 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=36.5
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||.= |.=||+|-...++++- . .+|||||.+.- --.|...+++..
T Consensus 83 ~~dG~VItH-GTDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 136 (330)
T 1wsa_A 83 ETEAVIITH-GTDTMEETAFFLNLTV-K-SQKPVVLVGAMRPGSSMSADGPMNLYNA 136 (330)
T ss_dssp TCCCEEEEC-CSSSHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEEc-CcchHHHHHHHHHHHc-C-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 368999985 6899999999998754 3 68999998762 234556666554
No 76
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=48.89 E-value=58 Score=24.45 Aligned_cols=68 Identities=21% Similarity=0.296 Sum_probs=41.7
Q ss_pred HHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCH
Q 033246 6 AEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNA 83 (123)
Q Consensus 6 ~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ 83 (123)
..++..||++|.-. .|+|+- ++|+++. .+|+|..+..|.-+ ++.......++-.+|+
T Consensus 279 ~~~~~~adv~v~ps~~e~~~~~--~~EAma~------G~PvI~~~~~~~~e-------------~v~~~~~g~~~~~~d~ 337 (394)
T 2jjm_A 279 AELLAMSDLMLLLSEKESFGLV--LLEAMAC------GVPCIGTRVGGIPE-------------VIQHGDTGYLCEVGDT 337 (394)
T ss_dssp HHHHHTCSEEEECCSCCSCCHH--HHHHHHT------TCCEEEECCTTSTT-------------TCCBTTTEEEECTTCH
T ss_pred HHHHHhCCEEEeccccCCCchH--HHHHHhc------CCCEEEecCCChHH-------------HhhcCCceEEeCCCCH
Confidence 34677899988532 355543 6777764 89999998754311 2222223333334589
Q ss_pred HHHHHHHHhhc
Q 033246 84 KELVQKLEEYV 94 (123)
Q Consensus 84 ee~l~~l~~~~ 94 (123)
+++.+.|....
T Consensus 338 ~~la~~i~~l~ 348 (394)
T 2jjm_A 338 TGVADQAIQLL 348 (394)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888887653
No 77
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=48.39 E-value=25 Score=28.23 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=36.6
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
+..|+|||+= |.=||+|-...++++- ...+|||||.+.- --.|...+++..
T Consensus 100 ~~~dG~VItH-GTDTmeeTA~~Ls~~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 155 (358)
T 2him_A 100 DDYDGFVILH-GTDTMAYTASALSFML-ENLGKPVIVTGSQIPLAELRSDGQINLLNA 155 (358)
T ss_dssp GGCSEEEEEC-CSTTHHHHHHHHHHHE-ETCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred hcCCeEEEec-CchHHHHHHHHHHHHH-hcCCCCEEEeCCCCCCcCCCcchHHHHHHH
Confidence 3579999985 6899999999998753 2358999998862 234555565553
No 78
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=47.52 E-value=52 Score=25.91 Aligned_cols=64 Identities=16% Similarity=0.130 Sum_probs=36.8
Q ss_pred HHHHHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEc-CC
Q 033246 4 RKAEMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSA-PN 82 (123)
Q Consensus 4 RK~~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~-dd 82 (123)
....++..||++|.=+ |++. .|+++ .++|+|+....+=+..+ ++.| ....+ .|
T Consensus 294 ~~~~l~~~ad~vv~~S---Gg~~--~EA~a------~g~PvV~~~~~~~~~e~-------v~~g--------~~~lv~~d 347 (403)
T 3ot5_A 294 DFHNFLRKSYLVFTDS---GGVQ--EEAPG------MGVPVLVLRDTTERPEG-------IEAG--------TLKLIGTN 347 (403)
T ss_dssp HHHHHHHHEEEEEECC---HHHH--HHGGG------TTCCEEECCSSCSCHHH-------HHHT--------SEEECCSC
T ss_pred HHHHHHHhcCEEEECC---ccHH--HHHHH------hCCCEEEecCCCcchhh-------eeCC--------cEEEcCCC
Confidence 3456788899876444 3333 45554 38999998432334332 2333 12333 38
Q ss_pred HHHHHHHHHhh
Q 033246 83 AKELVQKLEEY 93 (123)
Q Consensus 83 ~ee~l~~l~~~ 93 (123)
++++.+.+...
T Consensus 348 ~~~l~~ai~~l 358 (403)
T 3ot5_A 348 KENLIKEALDL 358 (403)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888777664
No 79
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=46.58 E-value=18 Score=26.98 Aligned_cols=86 Identities=13% Similarity=0.117 Sum_probs=53.6
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHH-----hCC-CCCcEEEEeC--CCccHH--HHHHHHHHHHcCC--CCcccccc
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQ-----LGI-HDKPVGLINV--DGYYNS--LLNFIDKAVDDGF--ISPSQRSI 76 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~q-----lg~-~~kPiilln~--~gf~~~--l~~~l~~~~~~gf--i~~~~~~~ 76 (123)
.+.+|++||.|=-.+|+.-+.-=++-.- .-. .++|+++.-. ...|+. ....|++|.+.|+ +++....+
T Consensus 94 ~~~aD~mvIaPaTanTlAKiA~GiaDnLlt~~~~A~d~~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~l 173 (209)
T 1mvl_A 94 RRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRL 173 (209)
T ss_dssp HHHCSEEEEEEECHHHHHHHHHTCCSSHHHHHHHTCCTTSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC---
T ss_pred cccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHhcCCCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCccccc
Confidence 4579999999999999988764221111 122 2789999864 236653 2344667777774 45544222
Q ss_pred e------EEcCCHHHHHHHHHhhc
Q 033246 77 L------VSAPNAKELVQKLEEYV 94 (123)
Q Consensus 77 i------~~~dd~ee~l~~l~~~~ 94 (123)
- --..+++++++.+....
T Consensus 174 acg~~G~gr~~~~~~Iv~~v~~~l 197 (209)
T 1mvl_A 174 ASGDYGNGAMAEPSLIYSTVRLFW 197 (209)
T ss_dssp ------CCBCCCHHHHHHHHHHHH
T ss_pred cCCCcCCCCCCCHHHHHHHHHHHh
Confidence 1 13568999999887653
No 80
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=46.33 E-value=41 Score=23.74 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=24.4
Q ss_pred HHh-cCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 9 ARN-SDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 9 ~~~-sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.+. .|++|+.|-.....++..+.+.. .+.|+|+++.
T Consensus 56 ~~~~vdgii~~~~~~~~~~~~~~~~~~-----~~ipvV~~~~ 92 (276)
T 3ksm_A 56 SQAPPDALILAPNSAEDLTPSVAQYRA-----RNIPVLVVDS 92 (276)
T ss_dssp HHSCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HhCCCCEEEEeCCCHHHHHHHHHHHHH-----CCCcEEEEec
Confidence 345 89999999766566666665543 3567777764
No 81
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=45.12 E-value=20 Score=27.09 Aligned_cols=49 Identities=27% Similarity=0.232 Sum_probs=29.5
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGF 68 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gf 68 (123)
.++..+|+|| --||.||+.|.. . +.+|++++-. +.|+..+ -+.+.+.|.
T Consensus 300 ~lL~~~~~~v-~h~G~~s~~Eal---~------~GvP~v~~P~--~~dQ~~n-a~~v~~~G~ 348 (400)
T 4amg_A 300 ALLETCDAII-HHGGSGTLLTAL---A------AGVPQCVIPH--GSYQDTN-RDVLTGLGI 348 (400)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------HTCCEEECCC-----CHHH-HHHHHHHTS
T ss_pred HHhhhhhhee-ccCCccHHHHHH---H------hCCCEEEecC--cccHHHH-HHHHHHCCC
Confidence 3457788755 688999987654 3 3899999853 3343332 244555553
No 82
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=44.88 E-value=57 Score=21.19 Aligned_cols=68 Identities=18% Similarity=0.169 Sum_probs=40.7
Q ss_pred HHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCC-cEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 5 KAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDK-PVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 5 K~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~k-Piilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
...+...||++|.-. -|+|. =++|+++ ..+ ||+..+..+....++ .. ...++-.+
T Consensus 68 ~~~~~~~adv~v~ps~~e~~~~--~~~Eama------~G~vPvi~~~~~~~~~~~~------------~~--~~~~~~~~ 125 (166)
T 3qhp_A 68 LLEILKTCTLYVHAANVESEAI--ACLEAIS------VGIVPVIANSPLSATRQFA------------LD--ERSLFEPN 125 (166)
T ss_dssp HHHHHTTCSEEEECCCSCCCCH--HHHHHHH------TTCCEEEECCTTCGGGGGC------------SS--GGGEECTT
T ss_pred HHHHHHhCCEEEECCcccCccH--HHHHHHh------cCCCcEEeeCCCCchhhhc------------cC--CceEEcCC
Confidence 445678899887532 25554 3666775 387 999844333332221 11 12366677
Q ss_pred CHHHHHHHHHhhc
Q 033246 82 NAKELVQKLEEYV 94 (123)
Q Consensus 82 d~ee~l~~l~~~~ 94 (123)
|++++.+.|....
T Consensus 126 ~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 126 NAKDLSAKIDWWL 138 (166)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8999988887753
No 83
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=42.80 E-value=47 Score=23.98 Aligned_cols=38 Identities=13% Similarity=0.075 Sum_probs=26.0
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+.....|++|+.|......++..+.+.. .+.|+|+++.
T Consensus 57 l~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 94 (305)
T 3g1w_A 57 AIAKNPAGIAISAIDPVELTDTINKAVD-----AGIPIVLFDS 94 (305)
T ss_dssp HHHHCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHHhCCCEEEEcCCCHHHHHHHHHHHHH-----CCCcEEEECC
Confidence 3446699999999876656666555432 3568887775
No 84
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=42.61 E-value=54 Score=25.27 Aligned_cols=38 Identities=29% Similarity=0.401 Sum_probs=24.7
Q ss_pred EEEEcCCc---hhhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc
Q 033246 14 CFIALPGG---YGTLEELLEVITWAQLGIHDKPVGLINVDGYY 53 (123)
Q Consensus 14 a~I~lPGG---~GTLdEl~evlt~~qlg~~~kPiilln~~gf~ 53 (123)
+.|+|+|| .+++++|.+...- -++.=..+.+++.+.||
T Consensus 56 ~~l~LsgGsTP~~~y~~L~~~~~~--~~idw~~v~~f~~DEr~ 96 (289)
T 3hn6_A 56 FILGLPTGSSPIGMYKNLIELNKN--KKISFQNVITFNMDEYI 96 (289)
T ss_dssp EEEEECCSSTTHHHHHHHHHHHHT--TSCCCTTEEEEESEEES
T ss_pred EEEEECCCccHHHHHHHHHHhHhh--cCCCchheEEEeCccee
Confidence 78999999 4555555543311 12333568889998888
No 85
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=42.51 E-value=18 Score=27.14 Aligned_cols=35 Identities=14% Similarity=0.062 Sum_probs=20.1
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHh-CCCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEELL---EVITWAQL-GIHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~ql-g~~~kPiilln~ 49 (123)
.|++|||.|+++.+. .+..+.+- ..+.|||.-+-.
T Consensus 101 ~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~ 139 (244)
T 3kkl_A 101 VFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICH 139 (244)
T ss_dssp EEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETT
T ss_pred EEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECH
Confidence 578999999865432 22222222 235788876643
No 86
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=42.42 E-value=64 Score=23.18 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=24.8
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.+..|++|+.|......++..+.+. ..+.|+|+++.
T Consensus 57 ~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 92 (309)
T 2fvy_A 57 AKGVKALAINLVDPAAAGTVIEKAR-----GQNVPVVFFNK 92 (309)
T ss_dssp HTTCSEEEECCSSGGGHHHHHHHHH-----TTTCCEEEESS
T ss_pred HcCCCEEEEeCCCcchhHHHHHHHH-----HCCCcEEEecC
Confidence 4568999999977655556555442 24678888875
No 87
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=41.78 E-value=19 Score=27.18 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=20.1
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHh-CCCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEELL---EVITWAQL-GIHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~ql-g~~~kPiilln~ 49 (123)
.|++|||.|++..+. .+..+.+- ..+.|||.-+-.
T Consensus 108 ~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~ 146 (247)
T 3n7t_A 108 LMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCH 146 (247)
T ss_dssp EEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETT
T ss_pred EEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECh
Confidence 688999999964321 22222222 235788876643
No 88
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=41.75 E-value=67 Score=25.96 Aligned_cols=55 Identities=18% Similarity=0.379 Sum_probs=33.3
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCC-cEEEEeCC--CccHH-----HHHHHHHHHHcCC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDK-PVGLINVD--GYYNS-----LLNFIDKAVDDGF 68 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~k-Piilln~~--gf~~~-----l~~~l~~~~~~gf 68 (123)
+.+.+|.+|++ ||=||+-..+..+ ..... ||+=+|.. ||..+ +.+.++.+.+..+
T Consensus 111 ~~~~~DlVIvl-GGDGTlL~aa~~~-----~~~~vpPiLGIN~G~lGFLt~~~~~~~~~al~~il~g~~ 173 (388)
T 3afo_A 111 IVNRTDLLVTL-GGDGTILHGVSMF-----GNTQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVISSRA 173 (388)
T ss_dssp HHHHCSEEEEE-ESHHHHHHHHHTT-----TTSCCCCEEEEECSSCCSSCCEEGGGHHHHHHHHHTTCC
T ss_pred cccCCCEEEEE-eCcHHHHHHHHHh-----cccCCCeEEEEECCCcccCCcCChHHHHHHHHHHhcCCc
Confidence 34567877766 8899998877443 22344 78877753 45443 4455555554443
No 89
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=41.74 E-value=55 Score=23.58 Aligned_cols=38 Identities=11% Similarity=-0.055 Sum_probs=26.7
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
++....|++|+.|-......+..+.+. ..+.|+|+++.
T Consensus 53 l~~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (306)
T 8abp_A 53 LAASGAKGFVICTPDPKLGSAIVAKAR-----GYDMKVIAVDD 90 (306)
T ss_dssp HHHTTCCEEEEECSCGGGHHHHHHHHH-----HTTCEEEEESS
T ss_pred HHHcCCCEEEEeCCCchhhHHHHHHHH-----HCCCcEEEeCC
Confidence 344568999999987766666555443 24679999883
No 90
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=41.69 E-value=47 Score=23.76 Aligned_cols=38 Identities=13% Similarity=-0.044 Sum_probs=26.1
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+.....|++|+.|...-...+..+.+.. .+.|+|+++.
T Consensus 60 l~~~~vdgiI~~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 97 (293)
T 3l6u_A 60 FVHLKVDAIFITTLDDVYIGSAIEEAKK-----AGIPVFAIDR 97 (293)
T ss_dssp HHHTTCSEEEEECSCTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHHcCCCEEEEecCChHHHHHHHHHHHH-----cCCCEEEecC
Confidence 3445789999999876666666655542 3678888765
No 91
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=41.27 E-value=30 Score=26.49 Aligned_cols=43 Identities=26% Similarity=0.525 Sum_probs=28.0
Q ss_pred cCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHH-----HHHHHHHcC
Q 033246 18 LPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLN-----FIDKAVDDG 67 (123)
Q Consensus 18 lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~-----~l~~~~~~g 67 (123)
|-.|+ |++.+|+.+.- ++. ..|++++ +||++++. |++.+.+.|
T Consensus 69 L~~g~-~~~~~~~~~~~--~r~-~~Pivlm---~Y~N~i~~~G~e~F~~~~~~aG 116 (252)
T 3tha_A 69 LDQGV-DIHSVFELLAR--IKT-KKALVFM---VYYNLIFSYGLEKFVKKAKSLG 116 (252)
T ss_dssp HHTTC-CHHHHHHHHHH--CCC-SSEEEEE---CCHHHHHHHCHHHHHHHHHHTT
T ss_pred HHCCC-CHHHHHHHHHH--Hhc-CCCEEEE---eccCHHHHhhHHHHHHHHHHcC
Confidence 33443 67778877643 332 2799999 59998765 556666655
No 92
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=41.11 E-value=17 Score=26.89 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=19.0
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHhC-CCCCcEEEEe
Q 033246 15 FIALPGGYGTLEELL---EVITWAQLG-IHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~qlg-~~~kPiilln 48 (123)
.|++|||.|+...+. ++..|.+-- ...|||.-+-
T Consensus 101 ~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC 138 (243)
T 1rw7_A 101 IFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVC 138 (243)
T ss_dssp EEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEET
T ss_pred EEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEEC
Confidence 789999999864332 233332221 2466666553
No 93
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=41.05 E-value=35 Score=24.47 Aligned_cols=56 Identities=9% Similarity=-0.064 Sum_probs=34.9
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC------------CccHHHHHHHHHHHHcCC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD------------GYYNSLLNFIDKAVDDGF 68 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~------------gf~~~l~~~l~~~~~~gf 68 (123)
.....|++|+.|......++..+.+.. .+.|+|+++.. +.+..-....+++.+.|.
T Consensus 66 ~~~~vdgiii~~~~~~~~~~~~~~~~~-----~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~ 133 (304)
T 3gbv_A 66 IEEQPDGVMFAPTVPQYTKGFTDALNE-----LGIPYIYIDSQIKDAPPLAFFGQNSHQSGYFAARMLMLLAV 133 (304)
T ss_dssp HTTCCSEEEECCSSGGGTHHHHHHHHH-----HTCCEEEESSCCTTSCCSEEEECCHHHHHHHHHHHHHHHST
T ss_pred HhcCCCEEEECCCChHHHHHHHHHHHH-----CCCeEEEEeCCCCCCCceEEEecChHHHHHHHHHHHHHHhC
Confidence 345689999999876666666665543 25677776642 134444455567777663
No 94
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=40.80 E-value=69 Score=24.30 Aligned_cols=70 Identities=19% Similarity=0.274 Sum_probs=41.0
Q ss_pred HHHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 4 RKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 4 RK~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
....++..||++|.-- .|+|+- ++|+++ ..+|+|..+..+. .. ++. ......++-.+
T Consensus 318 ~~~~~~~~adv~v~ps~~e~~~~~--~~Eama------~G~PvI~~~~~~~-~e-------~i~-----~~~~g~~~~~~ 376 (438)
T 3c48_A 318 ELVAVYRAADIVAVPSFNESFGLV--AMEAQA------SGTPVIAARVGGL-PI-------AVA-----EGETGLLVDGH 376 (438)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCHH--HHHHHH------TTCCEEEESCTTH-HH-------HSC-----BTTTEEEESSC
T ss_pred HHHHHHHhCCEEEECccccCCchH--HHHHHH------cCCCEEecCCCCh-hH-------Hhh-----CCCcEEECCCC
Confidence 3456778899977532 255542 566665 4899999886532 11 221 11222333345
Q ss_pred CHHHHHHHHHhhc
Q 033246 82 NAKELVQKLEEYV 94 (123)
Q Consensus 82 d~ee~l~~l~~~~ 94 (123)
|++++.+.|.+..
T Consensus 377 d~~~la~~i~~l~ 389 (438)
T 3c48_A 377 SPHAWADALATLL 389 (438)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8998888887653
No 95
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=40.57 E-value=69 Score=21.05 Aligned_cols=60 Identities=13% Similarity=0.061 Sum_probs=34.4
Q ss_pred chhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHHHh
Q 033246 21 GYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 92 (123)
Q Consensus 21 G~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~l~~ 92 (123)
|+|.|.++...+. ..+..++|.|.+ .+..+ .+...|+.+.-. ....+.+|.+++++.++.
T Consensus 81 gl~~L~~~~~~~~-----~~g~~l~l~~~~---~~v~~---~l~~~gl~~~~~-~~~~if~s~~~Al~~~~~ 140 (143)
T 3llo_A 81 GVKTLAGIVKEYG-----DVGIYVYLAGCS---AQVVN---DLTSNRFFENPA-LKELLFHSIHDAVLGSQV 140 (143)
T ss_dssp HHHHHHHHHHHHH-----TTTCEEEEESCC---HHHHH---HHHHTTTTSSGG-GGGGEESSHHHHHHHTSS
T ss_pred HHHHHHHHHHHHH-----HCCCEEEEEeCC---HHHHH---HHHhCCCeeccC-ccceEECcHHHHHHHHHh
Confidence 6677777665553 356788888765 22322 344455543211 023467888888877654
No 96
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=40.17 E-value=36 Score=26.55 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=46.6
Q ss_pred HHHHHHHhcCEEEEc--CCchhh-HHHH----HHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccc
Q 033246 4 RKAEMARNSDCFIAL--PGGYGT-LEEL----LEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSI 76 (123)
Q Consensus 4 RK~~m~~~sDa~I~l--PGG~GT-LdEl----~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~ 76 (123)
....+...||+||.- ..|+|. +-|. +|-++. .+|||..+. +.......
T Consensus 277 ~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~------G~PVIas~~-------------------v~~~~~G~ 331 (406)
T 2hy7_A 277 QTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFF------GLPAVCPNA-------------------VVGPYKSR 331 (406)
T ss_dssp HHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHH------TCCEEEEGG-------------------GTCSCSSE
T ss_pred HHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhC------CCcEEEehh-------------------cccCcceE
Confidence 345677889988752 345554 3332 122243 899998864 22233445
Q ss_pred e-EEcCCHHHHHHHHHhhcCCC-CCCcccceeccc
Q 033246 77 L-VSAPNAKELVQKLEEYVPLH-DGVVAKVKWEAE 109 (123)
Q Consensus 77 i-~~~dd~ee~l~~l~~~~~~~-~~~~~~~~w~~~ 109 (123)
+ +-.+|++++.+.|....... ......++|..-
T Consensus 332 l~v~~~d~~~la~ai~~ll~~~~~~~~~~~sw~~~ 366 (406)
T 2hy7_A 332 FGYTPGNADSVIAAITQALEAPRVRYRQCLNWSDT 366 (406)
T ss_dssp EEECTTCHHHHHHHHHHHHHCCCCCCSCCCBHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHhCcchhhhhcCCHHHH
Confidence 5 55678999888887653211 133455778743
No 97
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=40.10 E-value=11 Score=26.99 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=18.7
Q ss_pred EEEcCCchhhHH--HHHHHHHHHHh-CCCCCcEEEEe
Q 033246 15 FIALPGGYGTLE--ELLEVITWAQL-GIHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTLd--El~evlt~~ql-g~~~kPiilln 48 (123)
.|++|||.|+-+ +=-.+..+.+- ..+.|||.-+-
T Consensus 72 ~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC 108 (177)
T 4hcj_A 72 AVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIG 108 (177)
T ss_dssp EEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEET
T ss_pred EEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEec
Confidence 578899999732 00122233222 24578887663
No 98
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=40.00 E-value=26 Score=26.28 Aligned_cols=11 Identities=45% Similarity=1.250 Sum_probs=8.9
Q ss_pred EEEcCCchhhH
Q 033246 15 FIALPGGYGTL 25 (123)
Q Consensus 15 ~I~lPGG~GTL 25 (123)
.|++|||.|..
T Consensus 110 ~livPGG~~~~ 120 (242)
T 3l3b_A 110 MLVIPGGYGVA 120 (242)
T ss_dssp EEEECCCHHHH
T ss_pred EEEEcCCcchh
Confidence 56789999974
No 99
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=39.93 E-value=40 Score=24.63 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=26.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+.+..|++|+.|.....+.+..+.+. ..+.|+|+++.
T Consensus 55 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 91 (313)
T 3m9w_A 55 INRGVDVLVIIPYNGQVLSNVVKEAK-----QEGIKVLAYDR 91 (313)
T ss_dssp HHTTCSEEEEECSSTTSCHHHHHHHH-----TTTCEEEEESS
T ss_pred HHcCCCEEEEeCCChhhhHHHHHHHH-----HCCCeEEEECC
Confidence 44679999999987776667666553 24678888775
No 100
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=39.73 E-value=63 Score=23.58 Aligned_cols=38 Identities=11% Similarity=0.014 Sum_probs=26.4
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
++.+..|++|+.|-.....++..+.+.. .+.|+|+++.
T Consensus 55 ~~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 92 (330)
T 3uug_A 55 MVTKGVKVLVIASIDGTTLSDVLKQAGE-----QGIKVIAYDR 92 (330)
T ss_dssp HHHHTCSEEEECCSSGGGGHHHHHHHHH-----TTCEEEEESS
T ss_pred HHHcCCCEEEEEcCCchhHHHHHHHHHH-----CCCCEEEECC
Confidence 3456789999999876566666655532 3668888765
No 101
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=39.64 E-value=66 Score=24.35 Aligned_cols=66 Identities=24% Similarity=0.260 Sum_probs=39.5
Q ss_pred HHHHHHhcCEEEEcCC---chhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 5 KAEMARNSDCFIALPG---GYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 5 K~~m~~~sDa~I~lPG---G~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
...+...||++|. |- |+|.- ++|+++. .+|+|..+..| +-+ ++..+ ..-.+++
T Consensus 309 ~~~~~~~ad~~v~-ps~~E~~~~~--~lEAma~------G~PvI~~~~~g----~~e----~i~~~-------~~g~l~~ 364 (416)
T 2x6q_A 309 VNAFQRASDVILQ-MSIREGFGLT--VTEAMWK------GKPVIGRAVGG----IKF----QIVDG-------ETGFLVR 364 (416)
T ss_dssp HHHHHHHCSEEEE-CCSSCSSCHH--HHHHHHT------TCCEEEESCHH----HHH----HCCBT-------TTEEEES
T ss_pred HHHHHHhCCEEEE-CCCcCCCccH--HHHHHHc------CCCEEEccCCC----Chh----heecC-------CCeEEEC
Confidence 4456788999865 54 45543 6777764 89999987532 222 22211 1123334
Q ss_pred CHHHHHHHHHhhc
Q 033246 82 NAKELVQKLEEYV 94 (123)
Q Consensus 82 d~ee~l~~l~~~~ 94 (123)
|++++.+.|.+..
T Consensus 365 d~~~la~~i~~ll 377 (416)
T 2x6q_A 365 DANEAVEVVLYLL 377 (416)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8888888887653
No 102
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=39.53 E-value=38 Score=28.04 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=37.2
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||+= |.=||+|-...++++ +...+|||||.+.- --.|...+++..
T Consensus 168 ~~DG~VItH-GTDTMeeTA~~Lsl~-l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 222 (438)
T 1zq1_A 168 GDYGVVVAH-GTDTMGYTAAALSFM-LRNLGKPVVLVGAQRSSDRPSSDAAMNLICS 222 (438)
T ss_dssp TCSEEEEEC-CSSSHHHHHHHHHHH-EESCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEec-CchhHHHHHHHHHHH-HhCCCCCEEEeCCCCCCCCCCcchHHHHHHH
Confidence 579999985 689999999999875 33458999998862 234556666654
No 103
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=39.27 E-value=29 Score=26.33 Aligned_cols=44 Identities=16% Similarity=0.101 Sum_probs=30.1
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHH-HhCCCC-CcEEEEeCCCcc
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWA-QLGIHD-KPVGLINVDGYY 53 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~-qlg~~~-kPiilln~~gf~ 53 (123)
.+...+.|+|+|| .|...+++.|.-. +-++.= +.+.+++.+.||
T Consensus 33 ~~~~~~~l~LsgG-stP~~ly~~L~~~~~~~idw~~~v~~f~~DEr~ 78 (266)
T 3eb9_A 33 SQQWPLSIALAGG-STPKMTYARLHDEHLNLLREKRALRFFMGDERM 78 (266)
T ss_dssp GGGCSEEEEECCS-HHHHHHHHHHHHHHHHHHTTSCCEEEEESEEES
T ss_pred HhCCCEEEEEcCC-CCHHHHHHHHHHHhhcCCChHHcEEEEeeeeec
Confidence 4567899999999 4777777777621 112233 667888887777
No 104
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=39.24 E-value=18 Score=26.48 Aligned_cols=10 Identities=40% Similarity=1.152 Sum_probs=9.0
Q ss_pred EEEcCCchhh
Q 033246 15 FIALPGGYGT 24 (123)
Q Consensus 15 ~I~lPGG~GT 24 (123)
.|++|||.|+
T Consensus 93 ~livpGG~~~ 102 (232)
T 1vhq_A 93 ALIVPGGFGA 102 (232)
T ss_dssp EEEECCSTHH
T ss_pred EEEECCCcch
Confidence 6889999998
No 105
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=38.68 E-value=34 Score=27.00 Aligned_cols=44 Identities=20% Similarity=0.274 Sum_probs=29.2
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhC-CCCCcEEEEeCCCccH
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYN 54 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg-~~~kPiilln~~gf~~ 54 (123)
+...+.|+|+|| .|...+++.|...+-+ ..=+.+.+++.+.||-
T Consensus 58 ~~~~~~l~LsgG-sTP~~ly~~L~~~~~~~idw~~V~~f~~DEr~v 102 (312)
T 3e15_A 58 EGGHVVIGLSGG-KTPIDVYKNIALVKDIKIDTSKLIFFIIDERYK 102 (312)
T ss_dssp TTCCCEEEECCS-HHHHHHHHHHTTCCSSCCCGGGCEEEESEEECC
T ss_pred hCCCEEEEEeCC-CCHHHHHHHHHHhhccCCCccceEEEEeeeecC
Confidence 346789999999 7888888887631111 2225677777765553
No 106
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=38.30 E-value=56 Score=23.65 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=50.3
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHH--------HHHHhCCCCCcEEEEeCCCccHH--HHHHHHHHHHcCC--CCcccccc
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVI--------TWAQLGIHDKPVGLINVDGYYNS--LLNFIDKAVDDGF--ISPSQRSI 76 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evl--------t~~qlg~~~kPiilln~~gf~~~--l~~~l~~~~~~gf--i~~~~~~~ 76 (123)
...+|++||.|=-.+|+.-+..=+ ....+ +.++|+++.-.+ .|.. ..+.+..+.+.|+ +++.. ..
T Consensus 79 ~~~aD~mvIaPaTanTlAkiA~GiaDnLlt~~a~~~l-k~~~plvl~Pa~-m~~~~~~~~N~~~L~~~G~~ivpp~~-g~ 155 (189)
T 2ejb_A 79 LVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVAL-KERVPLVLLVRE-APYNEIHLENMLKITRMGGVVVPASP-AF 155 (189)
T ss_dssp HTTEEEEEEEEECHHHHHHHHHTCCSSHHHHHHHHHH-HHTCCEEEEECC-SSCCHHHHHHHHHHHHTTCEEEECCC-CS
T ss_pred ccccCEEEEecCCHHHHHHHHcCcCCcHHHHHHHHHc-cCCCcEEEEECC-CCCCHHHHHHHHHHHHCCeEEeCCCh-HH
Confidence 367899999999999998876421 11111 237899999775 4543 2344566777773 33332 22
Q ss_pred eEEcCCHHHHHHHHHh
Q 033246 77 LVSAPNAKELVQKLEE 92 (123)
Q Consensus 77 i~~~dd~ee~l~~l~~ 92 (123)
..=..+++++++++..
T Consensus 156 ~~~p~si~div~~~v~ 171 (189)
T 2ejb_A 156 YHKPQSIDDMINFVVG 171 (189)
T ss_dssp TTCCCSHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHH
Confidence 3345678888776644
No 107
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=38.25 E-value=80 Score=20.45 Aligned_cols=61 Identities=10% Similarity=0.006 Sum_probs=36.4
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHHHhh
Q 033246 20 GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEY 93 (123)
Q Consensus 20 GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~l~~~ 93 (123)
-|+|.|.++...+. ..+..++|.|.++ ++.+. +...|+.. ......+.+|.+++++.+++-
T Consensus 64 sgl~~L~~~~~~~~-----~~g~~l~l~~~~~---~v~~~---l~~~gl~~--~~~~~~i~~t~~~Al~~~~~~ 124 (130)
T 2kln_A 64 TALDALDQLRTELL-----RRGIVFAMARVKQ---DLRES---LRAASLLD--KIGEDHIFMTLPTAVQAFRRR 124 (130)
T ss_dssp STTTHHHHHHHHHH-----TTTEEEEEECCSS---HHHHH---HHHCTTHH--HHCTTEEESCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH-----HCCCEEEEEcCCH---HHHHH---HHHcCChh--hcCcceeECCHHHHHHHHHhh
Confidence 47788888776664 3467788887763 23222 33344321 112236788999998877653
No 108
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=37.90 E-value=63 Score=20.35 Aligned_cols=57 Identities=16% Similarity=0.281 Sum_probs=29.9
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHHHh
Q 033246 20 GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 92 (123)
Q Consensus 20 GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~l~~ 92 (123)
-|+|.|.++...+. ..+.++.+.|... ++...|+. .|+ .+.+.+.+|.+++++.+.+
T Consensus 58 sgl~~L~~~~~~~~-----~~g~~l~l~~~~~---~v~~~l~~---~gl-----~~~~~i~~~~~~Al~~~~~ 114 (117)
T 4hyl_A 58 AGLRVLLSLYRHTS-----NQQGALVLVGVSE---EIRDTMEI---TGF-----WNFFTACASMDEALRILGS 114 (117)
T ss_dssp HHHHHHHHHHHHHH-----HTTCEEEEECCCH---HHHHHHHH---HTC-----GGGCEEESCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHH-----HcCCEEEEEeCCH---HHHHHHHH---hCc-----cceeeecCCHHHHHHHhcc
Confidence 35666665554443 2456777776653 22222221 121 2345677888888776643
No 109
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=37.84 E-value=16 Score=23.85 Aligned_cols=41 Identities=10% Similarity=0.276 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHcCCCCcccccceEEc-----CCHHHHHHHHHhhcCCCC
Q 033246 54 NSLLNFIDKAVDDGFISPSQRSILVSA-----PNAKELVQKLEEYVPLHD 98 (123)
Q Consensus 54 ~~l~~~l~~~~~~gfi~~~~~~~i~~~-----dd~ee~l~~l~~~~~~~~ 98 (123)
+.++..+.+.+. .|.-.++|+.- ++|+++++.+++|++..+
T Consensus 34 d~ll~~f~~~te----HP~gSDLIfyP~~~~e~spE~Iv~~ik~wRa~~G 79 (86)
T 1fr2_A 34 VKLVTHFAEMTE----HPSGSDLIYYPKEGDDDSPSGIVNTVKQWRAANG 79 (86)
T ss_dssp HHHHHHHHHHHC----CTTTTHHHHSCCTTCCCSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC----CCCcCceeecCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 556666666553 34556666655 579999999999987654
No 110
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=37.80 E-value=21 Score=27.56 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=24.7
Q ss_pred cCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.|.+| .-||=||+.|+...+.- ...+.|+.+++.
T Consensus 81 ~d~vv-v~GGDGTv~~v~~~l~~---~~~~~pl~iIP~ 114 (337)
T 2qv7_A 81 YDVLI-AAGGDGTLNEVVNGIAE---KPNRPKLGVIPM 114 (337)
T ss_dssp CSEEE-EEECHHHHHHHHHHHTT---CSSCCEEEEEEC
T ss_pred CCEEE-EEcCchHHHHHHHHHHh---CCCCCcEEEecC
Confidence 35544 56999999999988721 124679999887
No 111
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=37.47 E-value=76 Score=23.37 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=23.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..+..|++|+.|.....+++..+.+. ..+.|+|+++.
T Consensus 59 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 95 (325)
T 2x7x_A 59 MDEGVDLLIISANEAAPMTPIVEEAY-----QKGIPVILVDR 95 (325)
T ss_dssp HHTTCSEEEECCSSHHHHHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEeCCCHHHHHHHHHHHH-----HCCCeEEEeCC
Confidence 34568999999876544445544432 13568888775
No 112
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=37.40 E-value=73 Score=23.33 Aligned_cols=80 Identities=14% Similarity=0.201 Sum_probs=48.2
Q ss_pred hcCEEEEcCCchhhHHHHHHHH-----HH---HHhCCCCCcEEEEeCCCccHHH-HHHHHHHHHcC--CCCcccccceEE
Q 033246 11 NSDCFIALPGGYGTLEELLEVI-----TW---AQLGIHDKPVGLINVDGYYNSL-LNFIDKAVDDG--FISPSQRSILVS 79 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evl-----t~---~qlg~~~kPiilln~~gf~~~l-~~~l~~~~~~g--fi~~~~~~~i~~ 79 (123)
.+|++||.|=-.+|+.-+.-=+ +. ..+ ..++|+++.-.+-+..+. .+.+..+.+.| ++++.. ..+.-
T Consensus 77 ~aD~mvIaPaTanTlAkiA~GiaDnLlt~aa~v~L-~~~~plvl~Pa~m~~~~~~~~N~~~L~~~G~~ivpp~~-g~~~~ 154 (197)
T 1sbz_A 77 RTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVL-KEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMP-AFYNH 154 (197)
T ss_dssp CCSEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHH-HHTCEEEEEECCSSBCHHHHHHHHHHHTTTCEECCCCC-CCTTC
T ss_pred ccCEEEEecCCHhHHHHHHccccccHHHHHHHHHH-hcCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCC-cccCC
Confidence 5899999999999998876311 11 111 237899999775433332 34456666666 344433 22222
Q ss_pred cCCHHHHHHHHHh
Q 033246 80 APNAKELVQKLEE 92 (123)
Q Consensus 80 ~dd~ee~l~~l~~ 92 (123)
..+++++++.+..
T Consensus 155 p~~i~~~v~~~v~ 167 (197)
T 1sbz_A 155 PETVDDIVHHVVA 167 (197)
T ss_dssp CCBHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4567777766544
No 113
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=37.12 E-value=22 Score=27.24 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=18.9
Q ss_pred EEEcCCchhhH------HHHHHHHHHHHhCCCCCcEEEEe
Q 033246 15 FIALPGGYGTL------EELLEVITWAQLGIHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTL------dEl~evlt~~qlg~~~kPiilln 48 (123)
.|++|||.|+. .++.+.+... ....|||+-+-
T Consensus 148 ~livPGG~g~~~~l~~~~~l~~~l~~~--~~~gk~VaaIC 185 (291)
T 1n57_A 148 AIFVPGGHGALIGLPESQDVAAALQWA--IKNDRFVISLC 185 (291)
T ss_dssp EEEECCSGGGGSSGGGCHHHHHHHHHH--HHTTCEEEEET
T ss_pred EEEecCCcchhhhhhhCHHHHHHHHHH--HHcCCEEEEEC
Confidence 78999999987 2344333321 12456666553
No 114
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=35.73 E-value=69 Score=22.86 Aligned_cols=37 Identities=16% Similarity=0.054 Sum_probs=23.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.....|++|+.|.......+..+.+. ..+.|+|+++.
T Consensus 55 ~~~~vdgiI~~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 91 (290)
T 2fn9_A 55 IAAGYDAIIFNPTDADGSIANVKRAK-----EAGIPVFCVDR 91 (290)
T ss_dssp HHTTCSEEEECCSCTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEecCChHHHHHHHHHHH-----HCCCeEEEEec
Confidence 34568999999876554444444332 13568888875
No 115
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=35.14 E-value=46 Score=24.14 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=26.5
Q ss_pred HHHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 7 EMARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 7 ~m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
++....|++|+.|.....+++..+.+.- .+.|+|+++.
T Consensus 57 l~~~~vdgiii~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 94 (297)
T 3rot_A 57 ALATYPSGIATTIPSDTAFSKSLQRANK-----LNIPVIAVDT 94 (297)
T ss_dssp HHHTCCSEEEECCCCSSTTHHHHHHHHH-----HTCCEEEESC
T ss_pred HHHcCCCEEEEeCCCHHHHHHHHHHHHH-----CCCCEEEEcC
Confidence 3455689999999887777777665542 2567777764
No 116
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=34.99 E-value=58 Score=24.97 Aligned_cols=44 Identities=23% Similarity=0.384 Sum_probs=28.6
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHH-----HHHHHHHHcC
Q 033246 20 GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLL-----NFIDKAVDDG 67 (123)
Q Consensus 20 GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~-----~~l~~~~~~g 67 (123)
.|+ |++.+|+.+.-.+-.....|++++ +||++++ .+++.+.+.|
T Consensus 77 ~G~-~~~~~~~~v~~~r~~~~~~Pivlm---~Y~n~v~~~g~~~f~~~~~~aG 125 (271)
T 3nav_A 77 AKT-TPDICFELIAQIRARNPETPIGLL---MYANLVYARGIDDFYQRCQKAG 125 (271)
T ss_dssp TTC-CHHHHHHHHHHHHHHCTTSCEEEE---ECHHHHHHTCHHHHHHHHHHHT
T ss_pred cCC-CHHHHHHHHHHHHhcCCCCCEEEE---ecCcHHHHHhHHHHHHHHHHCC
Confidence 443 566777776544322247899998 4999754 4567777666
No 117
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=34.77 E-value=22 Score=24.25 Aligned_cols=37 Identities=27% Similarity=0.240 Sum_probs=20.8
Q ss_pred cCEEEEcCCchhhHH--HHHHHHHHHHh-CCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYGTLE--ELLEVITWAQL-GIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~GTLd--El~evlt~~ql-g~~~kPiilln~ 49 (123)
.|+ |++|||.|+.. .--.+..|.+- -.+.|||.-+-.
T Consensus 64 ~D~-livpGG~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~ 103 (168)
T 3l18_A 64 FDA-LVLPGGKAPEIVRLNEKAVMITRRMFEDDKPVASICH 103 (168)
T ss_dssp CSE-EEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CCE-EEECCCcCHHHhccCHHHHHHHHHHHHCCCEEEEECH
Confidence 344 56799998742 11123333332 246889887754
No 118
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=33.99 E-value=83 Score=19.64 Aligned_cols=15 Identities=7% Similarity=0.226 Sum_probs=8.3
Q ss_pred EcCCHHHHHHHHHhh
Q 033246 79 SAPNAKELVQKLEEY 93 (123)
Q Consensus 79 ~~dd~ee~l~~l~~~ 93 (123)
+.+|.+++++.+..+
T Consensus 100 i~~~~~~Al~~~~~~ 114 (117)
T 1h4x_A 100 MDATEEEAIDRVRGI 114 (117)
T ss_dssp ECSCHHHHHHHTC--
T ss_pred EeCCHHHHHHHHHHh
Confidence 666777766655443
No 119
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=33.64 E-value=78 Score=22.66 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=23.3
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+....|++|+.|.......+..+.+. ..+.|+|+++.
T Consensus 54 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (283)
T 2ioy_A 54 IQQKVDVLLINPVDSDAVVTAIKEAN-----SKNIPVITIDR 90 (283)
T ss_dssp HHTTCSEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEeCCchhhhHHHHHHHH-----HCCCeEEEecC
Confidence 34568999999876544445444332 23568888864
No 120
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=33.61 E-value=67 Score=23.31 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=23.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..+..|++|+.|...-..++..+.+.. .+.|+|+++.
T Consensus 55 ~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 91 (306)
T 2vk2_A 55 VAQGVDAIFIAPVVATGWEPVLKEAKD-----AEIPVFLLDR 91 (306)
T ss_dssp HHHTCSEEEECCSSSSSCHHHHHHHHH-----TTCCEEEESS
T ss_pred HHcCCCEEEEeCCChhhHHHHHHHHHH-----CCCCEEEecC
Confidence 346789999998765434455544432 3568888775
No 121
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=33.58 E-value=71 Score=22.74 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=24.0
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.....|++|+.|... ++..+.+. ..+.|+|+++.
T Consensus 60 ~~~~vdgiIi~~~~~---~~~~~~l~-----~~~iPvV~i~~ 93 (276)
T 3jy6_A 60 GSRGFDGLILQSFSN---PQTVQEIL-----HQQMPVVSVDR 93 (276)
T ss_dssp HTTTCSEEEEESSCC---HHHHHHHH-----TTSSCEEEESC
T ss_pred HhCCCCEEEEecCCc---HHHHHHHH-----HCCCCEEEEec
Confidence 345789999999876 55555443 34778888875
No 122
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=33.43 E-value=92 Score=22.28 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=22.5
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.+..|++|+.|.......+..+.+. ..+.|+|+++.
T Consensus 59 ~~~vdgiii~~~~~~~~~~~~~~~~-----~~~ipvV~~~~ 94 (303)
T 3d02_A 59 ARKVDAITIVPNDANVLEPVFKKAR-----DAGIVVLTNES 94 (303)
T ss_dssp HTTCSEEEECCSCHHHHHHHHHHHH-----HTTCEEEEESC
T ss_pred HcCCCEEEEecCChHHHHHHHHHHH-----HCCCeEEEEec
Confidence 4568999999975544444444332 23568877764
No 123
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=33.39 E-value=29 Score=28.11 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=37.3
Q ss_pred EEEEcCCchhhHHHHHHHHHHHHhC-CCCCcEEEEeCCCccHHHHHHH-HHHHHcCCCCcccccceEEc-CCHHHHHHHH
Q 033246 14 CFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNSLLNFI-DKAVDDGFISPSQRSILVSA-PNAKELVQKL 90 (123)
Q Consensus 14 a~I~lPGG~GTLdEl~evlt~~qlg-~~~kPiilln~~gf~~~l~~~l-~~~~~~gfi~~~~~~~i~~~-dd~ee~l~~l 90 (123)
|+|+|-||-||= ++ ..+||++=+.. .|++++. +.+.+.|+ .+.+.++ ...+++.+++
T Consensus 14 ~vvILAaG~GtR-----------m~~~~pK~l~pv~g----kp~i~~~l~~~~~~g~-----~~i~vv~~~~~~~i~~~~ 73 (501)
T 3st8_A 14 AVLVLAAGPGTR-----------MRSDTPKVLHTLAG----RSMLSHVLHAIAKLAP-----QRLIVVLGHDHQRIAPLV 73 (501)
T ss_dssp EEEEEECSCCGG-----------GCCSSCGGGCEETT----EEHHHHHHHHHHHHCC-----SEEEEEECTTHHHHHHHH
T ss_pred eEEEECCcCccc-----------CCCCCCHHHeEECC----hhHHHHHHHHHHhCCC-----CEEEEEeCCCHHHHHHHH
Confidence 589999999983 33 34788776653 3566653 55666552 2333333 4567777777
Q ss_pred Hhh
Q 033246 91 EEY 93 (123)
Q Consensus 91 ~~~ 93 (123)
.+.
T Consensus 74 ~~~ 76 (501)
T 3st8_A 74 GEL 76 (501)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 124
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=33.30 E-value=24 Score=27.05 Aligned_cols=15 Identities=33% Similarity=0.771 Sum_probs=11.2
Q ss_pred HHhcCEEEEcCCchhh
Q 033246 9 ARNSDCFIALPGGYGT 24 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GT 24 (123)
++..|++ ++|||+|+
T Consensus 88 l~~~dgi-il~GG~~~ 102 (289)
T 2v4u_A 88 LCKADGI-LVPGGFGI 102 (289)
T ss_dssp HHHCSEE-EECSCCSS
T ss_pred HhhCCEE-EecCCCCc
Confidence 4566876 67889997
No 125
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=33.28 E-value=64 Score=24.64 Aligned_cols=41 Identities=32% Similarity=0.441 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHH-----HHHHHHHHHcC
Q 033246 24 TLEELLEVITWAQLGIHDKPVGLINVDGYYNSL-----LNFIDKAVDDG 67 (123)
Q Consensus 24 TLdEl~evlt~~qlg~~~kPiilln~~gf~~~l-----~~~l~~~~~~g 67 (123)
|++.+++.+.-.+-...+.|++++ +||+++ ..+++.+.+.|
T Consensus 78 ~~~~~~~~v~~ir~~~~~~Pivlm---~Y~npv~~~g~e~f~~~~~~aG 123 (267)
T 3vnd_A 78 TSSDCFDIITKVRAQHPDMPIGLL---LYANLVFANGIDEFYTKAQAAG 123 (267)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEE---ECHHHHHHHCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcC
Confidence 456666666543322246899988 499985 45677777766
No 126
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=33.21 E-value=77 Score=22.53 Aligned_cols=55 Identities=13% Similarity=0.116 Sum_probs=32.9
Q ss_pred HHHhcCEEEEcCCchh---hHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 8 MARNSDCFIALPGGYG---TLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 8 m~~~sDa~I~lPGG~G---TLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
.....|++|+.|.... ...+..+.+.. .+.|+|+++.. +.+..-....+++.+.|
T Consensus 68 ~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~-----~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G 136 (298)
T 3tb6_A 68 LSQHIDGLIVEPTKSALQTPNIGYYLNLEK-----NGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSLG 136 (298)
T ss_dssp HHTCCSEEEECCSSTTSCCTTHHHHHHHHH-----TTCCEEEESSCCTTCSSCEEEECHHHHHHHHHHHHHHTT
T ss_pred HHCCCCEEEEecccccccCCcHHHHHHHHh-----cCCCEEEEecCcCCCCCCEEEeCcHHHHHHHHHHHHHCC
Confidence 3567999999997653 23344444332 46788888752 13334445556777765
No 127
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=32.91 E-value=32 Score=24.25 Aligned_cols=34 Identities=29% Similarity=0.306 Sum_probs=19.5
Q ss_pred EEEcCCchhhHHHH---HHHHHHHHhC-CCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEEL---LEVITWAQLG-IHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl---~evlt~~qlg-~~~kPiilln~ 49 (123)
.|++|||.|+ +.+ -.+..|.+-- .+.|||.-+-.
T Consensus 89 ~livpGG~~~-~~l~~~~~l~~~l~~~~~~gk~i~aIC~ 126 (193)
T 1oi4_A 89 ALLLPGGHSP-DYLRGDNRFVTFTRDFVNSGKPVFAICH 126 (193)
T ss_dssp EEEECCBTHH-HHHTTSHHHHHHHHHHHHTTCCEEEETT
T ss_pred EEEECCCcCH-HHhhhCHHHHHHHHHHHHcCCEEEEECH
Confidence 5778899886 322 1233333322 35788887754
No 128
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=32.80 E-value=50 Score=22.71 Aligned_cols=37 Identities=24% Similarity=0.242 Sum_probs=27.2
Q ss_pred HHHHHhcCEEEE--cCC---chhhHHHHHHHHHHHHhCCCCCcEEEEe
Q 033246 6 AEMARNSDCFIA--LPG---GYGTLEELLEVITWAQLGIHDKPVGLIN 48 (123)
Q Consensus 6 ~~m~~~sDa~I~--lPG---G~GTLdEl~evlt~~qlg~~~kPiilln 48 (123)
..|+..+|+++| ||| .-|--.|+--+-. .++||.+++
T Consensus 77 ~~lL~~CdevwV~~L~Gw~~S~Gm~~Ei~~A~~------~g~pV~~~~ 118 (125)
T 1t1j_A 77 AFYMDHLEELIVLDLPGWRDSAGIRREMEFFEA------GGQRVSLWS 118 (125)
T ss_dssp HHHHHHCSEEEECCCTTGGGCHHHHHHHHHHHH------TTCEEEEHH
T ss_pred HHHHHhCCeeEEEecCCCCCChhHHHHHHHHHH------CCCcEEEEc
Confidence 357899999754 579 7888888875553 478988665
No 129
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=32.76 E-value=80 Score=22.98 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=24.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..+..|++|+.|.....+.+..+.+. ..+.|+|+++.
T Consensus 54 ~~~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (313)
T 2h3h_A 54 IAEGVNGIAIAPSDPTAVIPTIKKAL-----EMGIPVVTLDT 90 (313)
T ss_dssp HHTTCSEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHcCCCEEEEeCCChHHHHHHHHHHH-----HCCCeEEEeCC
Confidence 34678999999987655545544432 13578888875
No 130
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=32.49 E-value=70 Score=23.46 Aligned_cols=68 Identities=12% Similarity=0.087 Sum_probs=41.6
Q ss_pred HHHHHHhcCEEEEc------------CCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHH-HHcCCCCc
Q 033246 5 KAEMARNSDCFIAL------------PGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKA-VDDGFISP 71 (123)
Q Consensus 5 K~~m~~~sDa~I~l------------PGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~-~~~gfi~~ 71 (123)
...++..||++|.- .-|+|.- +.|+++. .+|+|..+..| ...++ +.. -..|++
T Consensus 225 l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~--~~EAma~------G~PvI~s~~~~-~~e~~---~~~~~~~g~~-- 290 (342)
T 2iuy_A 225 RLDLLASAHAVLAMSQAVTGPWGGIWCEPGATV--VSEAAVS------GTPVVGTGNGC-LAEIV---PSVGEVVGYG-- 290 (342)
T ss_dssp HHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHH--HHHHHHT------TCCEEECCTTT-HHHHG---GGGEEECCSS--
T ss_pred HHHHHHhCCEEEECCcccccccccccccCccHH--HHHHHhc------CCCEEEcCCCC-hHHHh---cccCCCceEE--
Confidence 35678899998864 3456643 6777764 99999998753 22111 100 012332
Q ss_pred ccccceEEcC-CHHHHHHHHHhhc
Q 033246 72 SQRSILVSAP-NAKELVQKLEEYV 94 (123)
Q Consensus 72 ~~~~~i~~~d-d~ee~l~~l~~~~ 94 (123)
++ |++++.+.|.+..
T Consensus 291 --------~~~d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 291 --------TDFAPDEARRTLAGLP 306 (342)
T ss_dssp --------SCCCHHHHHHHHHTSC
T ss_pred --------cCCCHHHHHHHHHHHH
Confidence 33 8888888887754
No 131
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=32.41 E-value=30 Score=24.76 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=20.1
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHh-CCCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEELL---EVITWAQL-GIHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~ql-g~~~kPiilln~ 49 (123)
.|++|||.|+...+. .+..|.+- ..+.|||.-+-.
T Consensus 92 ~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~ 130 (224)
T 1u9c_A 92 AIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCH 130 (224)
T ss_dssp EEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETT
T ss_pred EEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEECh
Confidence 678999999863321 23333322 235777776643
No 132
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=32.19 E-value=41 Score=26.74 Aligned_cols=49 Identities=24% Similarity=0.318 Sum_probs=36.4
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
..|+|||.= |.-||+|-...++++. ..+|||||.+.- -..|...+++..
T Consensus 90 ~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~A 143 (337)
T 4pga_A 90 DVDGIVITH-GTDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSADGMLNLYNA 143 (337)
T ss_dssp TCSEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEEC-CCccHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 468898875 6899999999999864 458999999761 235556666554
No 133
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=32.10 E-value=53 Score=22.68 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=9.4
Q ss_pred hcCEEEEcCCchhhHH
Q 033246 11 NSDCFIALPGGYGTLE 26 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLd 26 (123)
..|+ |++|||.++..
T Consensus 37 ~~dg-lil~GG~~~~~ 51 (186)
T 2ywj_A 37 GIDA-LIIPGGESTAI 51 (186)
T ss_dssp TCSE-EEECCSCHHHH
T ss_pred cCCE-EEECCCCchhh
Confidence 3465 55677777654
No 134
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=32.05 E-value=51 Score=22.05 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=25.3
Q ss_pred HHhcCEEEEcCCchhhH-----HHHHHHHHHHHhCCCCCcEEEEeCCC
Q 033246 9 ARNSDCFIALPGGYGTL-----EELLEVITWAQLGIHDKPVGLINVDG 51 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTL-----dEl~evlt~~qlg~~~kPiilln~~g 51 (123)
++.||++|+|-|=.-+- .|+-.+. ..+|||+.+..-|
T Consensus 36 I~~~~~vIvL~G~~t~~s~wv~~EI~~A~------~~gkpIigV~~~g 77 (111)
T 1eiw_A 36 PEDADAVIVLAGLWGTRRDEILGAVDLAR------KSSKPIITVRPYG 77 (111)
T ss_dssp SSSCSEEEEEGGGTTTSHHHHHHHHHHHT------TTTCCEEEECCSS
T ss_pred cccCCEEEEEeCCCcCCChHHHHHHHHHH------HcCCCEEEEEcCC
Confidence 35689999999877633 3333222 4699999998754
No 135
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=31.88 E-value=41 Score=23.90 Aligned_cols=34 Identities=24% Similarity=0.209 Sum_probs=19.2
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHhC-CCCCcEEEEe
Q 033246 15 FIALPGGYGTLEELL---EVITWAQLG-IHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~qlg-~~~kPiilln 48 (123)
.|++|||.|..+.+. .+..|.+-- .+.|||.-+-
T Consensus 69 ~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC 106 (205)
T 2ab0_A 69 VIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAIC 106 (205)
T ss_dssp EEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEET
T ss_pred EEEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEEC
Confidence 678899987555432 233333322 3567776553
No 136
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=31.46 E-value=42 Score=23.96 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=18.7
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHhC-CCCCcEEEEe
Q 033246 15 FIALPGGYGTLEELL---EVITWAQLG-IHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~qlg-~~~kPiilln 48 (123)
.|++|||.|..+.+. .+..|.+-- .+.|||.-+-
T Consensus 74 ~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC 111 (208)
T 3ot1_A 74 ALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAIC 111 (208)
T ss_dssp EEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEET
T ss_pred EEEECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEC
Confidence 466799987544332 333333322 4577776654
No 137
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=31.16 E-value=1.3e+02 Score=21.22 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=29.1
Q ss_pred HHHhcCEEEEcCCchhhHHHHHH-HHHHHHhCCCCCcEEEEeCCC---------ccHHHHHHHHHHHHcC
Q 033246 8 MARNSDCFIALPGGYGTLEELLE-VITWAQLGIHDKPVGLINVDG---------YYNSLLNFIDKAVDDG 67 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~e-vlt~~qlg~~~kPiilln~~g---------f~~~l~~~l~~~~~~g 67 (123)
.....|++|+.| .+ ++..+ .+. ..+.|+|+++... ++..-....+++.+.|
T Consensus 61 ~~~~~dgiIi~~---~~-~~~~~~~l~-----~~~iPvV~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G 121 (277)
T 3e61_A 61 VSHNCTGMISTA---FN-ENIIENTLT-----DHHIPFVFIDRINNEHNGISTNHFKGGQLQAEVVRKGK 121 (277)
T ss_dssp HHTTCSEEEECG---GG-HHHHHHHHH-----HC-CCEEEGGGCC---------HHHHHHHHHHHHHHTT
T ss_pred HhCCCCEEEEec---CC-hHHHHHHHH-----cCCCCEEEEeccCCCCCeEEechHHHHHHHHHHHHHCC
Confidence 345789999998 22 34433 332 3477888887531 3333444456677654
No 138
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=30.92 E-value=44 Score=23.42 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=20.3
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHhC-CCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEELL---EVITWAQLG-IHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~qlg-~~~kPiilln~ 49 (123)
.|++|||.|..+.+. .+..|.+-- .+.|||.-+-.
T Consensus 69 ~livpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~ 107 (197)
T 2rk3_A 69 VVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICA 107 (197)
T ss_dssp EEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETT
T ss_pred EEEECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECH
Confidence 678899986544332 234443332 35788877754
No 139
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=30.47 E-value=1.1e+02 Score=22.35 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=42.3
Q ss_pred cCEEEEcC-CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCc--cHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHHH
Q 033246 12 SDCFIALP-GGYGTLEELLEVITWAQLGIHDKPVGLINVDGY--YNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQ 88 (123)
Q Consensus 12 sDa~I~lP-GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf--~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~ 88 (123)
+|.+.+-| +|+-.+.++.+. .+.|++..+.-+- .+++++.+..+.+.|.-.-.-...+.-.++|.+.++
T Consensus 180 ad~i~~~~~~~~~~l~~i~~~--------~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~ 251 (273)
T 2qjg_A 180 ADIVKTSYTGDIDSFRDVVKG--------CPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITR 251 (273)
T ss_dssp CSEEEECCCSSHHHHHHHHHH--------CSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHh--------CCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHH
Confidence 67665554 444344333322 2689999886442 667777777666666422222333444567888777
Q ss_pred HHHhh
Q 033246 89 KLEEY 93 (123)
Q Consensus 89 ~l~~~ 93 (123)
.+.+.
T Consensus 252 ~l~~~ 256 (273)
T 2qjg_A 252 AVCKI 256 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 140
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=30.45 E-value=27 Score=26.57 Aligned_cols=35 Identities=23% Similarity=0.158 Sum_probs=24.5
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..|. |+.-||=||+.|+...+.-. ..+.|+.++..
T Consensus 63 ~~d~-vv~~GGDGTl~~v~~~l~~~---~~~~~l~iiP~ 97 (304)
T 3s40_A 63 KVDL-IIVFGGDGTVFECTNGLAPL---EIRPTLAIIPG 97 (304)
T ss_dssp TCSE-EEEEECHHHHHHHHHHHTTC---SSCCEEEEEEC
T ss_pred CCCE-EEEEccchHHHHHHHHHhhC---CCCCcEEEecC
Confidence 3454 55569999999998776321 24678988875
No 141
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=30.26 E-value=46 Score=26.43 Aligned_cols=50 Identities=22% Similarity=0.199 Sum_probs=36.3
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----CccHHHHHHHHH
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----GYYNSLLNFIDK 62 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----gf~~~l~~~l~~ 62 (123)
+..|+|||.= |.-||+|-...++++- ..+|||||.+.- .-.|...+++..
T Consensus 87 ~~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~A 141 (334)
T 3nxk_A 87 EGIDGVVITH-GTDTMEETAYFLNLTI--KSDKPVVLVGAMRPSTAISADGPKNLYNA 141 (334)
T ss_dssp TTCCEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred cCCCeEEEEC-CCchHHHHHHHHHHHc--CCCCCEEEECCCCCCCCCCchHHHHHHHH
Confidence 4578998875 6899999999998764 458999999851 234555565543
No 142
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=30.21 E-value=41 Score=23.25 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=19.4
Q ss_pred EEEcCCchhhHHHH---HHHHHHHHhC-CCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEEL---LEVITWAQLG-IHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl---~evlt~~qlg-~~~kPiilln~ 49 (123)
.|++|||.+..+.+ -++..|.+-- .+.|||.-+-.
T Consensus 78 ~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~ 116 (190)
T 2vrn_A 78 GLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICH 116 (190)
T ss_dssp EEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-C
T ss_pred EEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECH
Confidence 67789998555443 2233333322 45788876644
No 143
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=29.57 E-value=1.1e+02 Score=22.58 Aligned_cols=54 Identities=17% Similarity=0.369 Sum_probs=32.6
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
.....|++|+.|..... +++.+.+. ..+.|+|+++.. +.+..-....+++.+.|
T Consensus 116 ~~~~vdgiIi~~~~~~~-~~~~~~~~-----~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G 180 (338)
T 3dbi_A 116 LDLRCDAIMIYPRFLSV-DEIDDIID-----AHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAG 180 (338)
T ss_dssp HHTTCSEEEECCSSSCH-HHHHHHHH-----HCSSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHTT
T ss_pred HhCCCCEEEEeCCCCCh-HHHHHHHH-----cCCCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHCC
Confidence 34578999999976543 44544443 235788888752 13334445556777765
No 144
>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A
Probab=29.37 E-value=36 Score=28.56 Aligned_cols=40 Identities=23% Similarity=0.147 Sum_probs=26.5
Q ss_pred CEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHH
Q 033246 13 DCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNS 55 (123)
Q Consensus 13 Da~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~ 55 (123)
+++|++-|| +|..|+..+..+.+-. ++.=|+++.+..-++
T Consensus 548 ~iIVFvvGG-vTy~E~~~l~~ls~~~--~~~~viiGsT~Iln~ 587 (606)
T 3c98_A 548 RLIIFILGG-VSLNEMRCAYEVTQAN--GKWEVLIGSTHILTP 587 (606)
T ss_dssp EEEEEEETC-EEHHHHHHHHHHHHHH--SSCEEEEEESSEECH
T ss_pred EEEEEEECC-cCHHHHHHHHHHHHHc--CCcEEEEEeCCeeCH
Confidence 478888888 5999999888876542 222345555555555
No 145
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=28.92 E-value=50 Score=22.96 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=20.1
Q ss_pred EEEcCCchhhHHHHH---HHHHHHHhC-CCCCcEEEEeC
Q 033246 15 FIALPGGYGTLEELL---EVITWAQLG-IHDKPVGLINV 49 (123)
Q Consensus 15 ~I~lPGG~GTLdEl~---evlt~~qlg-~~~kPiilln~ 49 (123)
.|++|||.+..+.+. .+..|.+-- .+.|||.-+-.
T Consensus 70 ~livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~ 108 (190)
T 4e08_A 70 VVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICA 108 (190)
T ss_dssp EEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETT
T ss_pred EEEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECH
Confidence 567899975444332 334443332 46788887754
No 146
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=28.83 E-value=1.1e+02 Score=22.85 Aligned_cols=68 Identities=22% Similarity=0.245 Sum_probs=42.0
Q ss_pred HHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCC
Q 033246 5 KAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPN 82 (123)
Q Consensus 5 K~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd 82 (123)
...++..||++|.-. .|+|.- ++|+++. .+|+|..+..| +-+ +++ .. ...+.-.+|
T Consensus 324 ~~~~~~~adv~v~ps~~e~~~~~--~~EAma~------G~Pvi~s~~~~----~~e----~~~-----~~-~g~~~~~~d 381 (439)
T 3fro_A 324 VRELYGSVDFVIIPSYFEPFGLV--ALEAMCL------GAIPIASAVGG----LRD----IIT-----NE-TGILVKAGD 381 (439)
T ss_dssp HHHHHTTCSEEEECBSCCSSCHH--HHHHHHT------TCEEEEESSTH----HHH----HCC-----TT-TCEEECTTC
T ss_pred HHHHHHHCCEEEeCCCCCCccHH--HHHHHHC------CCCeEEcCCCC----cce----eEE-----cC-ceEEeCCCC
Confidence 345678899887542 455544 7777764 89999987642 222 221 12 333344468
Q ss_pred HHHHHHHHHhhc
Q 033246 83 AKELVQKLEEYV 94 (123)
Q Consensus 83 ~ee~l~~l~~~~ 94 (123)
++++.+.|.+..
T Consensus 382 ~~~la~~i~~ll 393 (439)
T 3fro_A 382 PGELANAILKAL 393 (439)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887654
No 147
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=28.75 E-value=48 Score=24.29 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=19.1
Q ss_pred EEEcCCchhhHHHH--HHHHHHHHh-CCCCCcEEEEe
Q 033246 15 FIALPGGYGTLEEL--LEVITWAQL-GIHDKPVGLIN 48 (123)
Q Consensus 15 ~I~lPGG~GTLdEl--~evlt~~ql-g~~~kPiilln 48 (123)
.|++|||.|+-+-. -.+..|.+- ..+.|+|.-+-
T Consensus 68 ~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC 104 (231)
T 3noq_A 68 VICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVS 104 (231)
T ss_dssp EEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEET
T ss_pred EEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEEC
Confidence 57789999984211 133444333 24567776653
No 148
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=28.72 E-value=1.1e+02 Score=18.92 Aligned_cols=17 Identities=41% Similarity=0.526 Sum_probs=8.3
Q ss_pred EEcCCch--hhHHHHHHHH
Q 033246 16 IALPGGY--GTLEELLEVI 32 (123)
Q Consensus 16 I~lPGG~--GTLdEl~evl 32 (123)
|.++|-+ ++.+++.+.+
T Consensus 16 v~l~G~l~~~~~~~l~~~l 34 (116)
T 1th8_B 16 VRLSGELDHHTAEELREQV 34 (116)
T ss_dssp EEEEEEESHHHHHHHHHHH
T ss_pred EEEeeeeccccHHHHHHHH
Confidence 3444442 4555555544
No 149
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=28.55 E-value=1e+02 Score=19.88 Aligned_cols=31 Identities=6% Similarity=0.238 Sum_probs=15.8
Q ss_pred hhhHHHHHHHHHHHHhCCCCCcEEEEeCC--CccHH
Q 033246 22 YGTLEELLEVITWAQLGIHDKPVGLINVD--GYYNS 55 (123)
Q Consensus 22 ~GTLdEl~evlt~~qlg~~~kPiilln~~--gf~~~ 55 (123)
+|+.+.+-+.+. ++.. ....++++.. .|.|.
T Consensus 32 f~~a~~~~~~l~--~~~~-~~~~vvlDls~v~~iDs 64 (130)
T 4dgh_A 32 FAAAETFERVMG--SIQE-TPQILILRLKWVPFMDI 64 (130)
T ss_dssp HHHHHHHHHHHH--HSSS-CCSEEEEECTTCCCCCH
T ss_pred ehhHHHHHHHHH--Hhcc-CCCEEEEECCCCCcccH
Confidence 567777776654 2322 2344555553 25554
No 150
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=28.50 E-value=1.2e+02 Score=23.82 Aligned_cols=68 Identities=16% Similarity=0.036 Sum_probs=41.1
Q ss_pred HHHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 4 RKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 4 RK~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
....+...||+||... =|+|.. ++|+++ ..+|||. +..|.. . +++. .....+.-..
T Consensus 307 ~l~~~~~~adv~v~pS~~E~~g~~--~lEAmA------~G~PVV~-~~~g~~-e-------~v~~-----~~~G~lv~~~ 364 (413)
T 2x0d_A 307 DYADLLKRSSIGISLMISPHPSYP--PLEMAH------FGLRVIT-NKYENK-D-------LSNW-----HSNIVSLEQL 364 (413)
T ss_dssp HHHHHHHHCCEEECCCSSSSCCSH--HHHHHH------TTCEEEE-ECBTTB-C-------GGGT-----BTTEEEESSC
T ss_pred HHHHHHHhCCEEEEecCCCCCCcH--HHHHHh------CCCcEEE-eCCCcc-h-------hhhc-----CCCEEEeCCC
Confidence 3456778899998753 267754 577776 4999998 554432 1 1211 1222333357
Q ss_pred CHHHHHHHHHhh
Q 033246 82 NAKELVQKLEEY 93 (123)
Q Consensus 82 d~ee~l~~l~~~ 93 (123)
|++++.+.|...
T Consensus 365 d~~~la~ai~~l 376 (413)
T 2x0d_A 365 NPENIAETLVEL 376 (413)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 888887776553
No 151
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=28.41 E-value=45 Score=21.42 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=18.5
Q ss_pred EEEcCC-----chhhHHHHHHHHHHHHhCCCCCcEEEEeCC
Q 033246 15 FIALPG-----GYGTLEELLEVITWAQLGIHDKPVGLINVD 50 (123)
Q Consensus 15 ~I~lPG-----G~GTLdEl~evlt~~qlg~~~kPiilln~~ 50 (123)
+|-+.| -++|.+++-+.+. ..+...+.+.++++.+
T Consensus 17 vv~l~G~l~~ld~~~~~~l~~~l~-~~l~~~~~~~vvlDls 56 (121)
T 3t6o_A 17 VISFPAVFQRLRETEVEQIASTFL-AAMQGAQPRKVLIDLE 56 (121)
T ss_dssp EEECCGGGSEECHHHHHHHHHHHH-HTTCCSSSCEEEEECT
T ss_pred EEEEccccccCchhhHHHHHHHHH-HHHhhcCCCeEEEECC
Confidence 455667 6777777776652 1222223344555553
No 152
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=28.11 E-value=1e+02 Score=23.18 Aligned_cols=75 Identities=19% Similarity=0.300 Sum_probs=43.2
Q ss_pred HHHHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCCC---Cc-------
Q 033246 4 RKAEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGFI---SP------- 71 (123)
Q Consensus 4 RK~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gfi---~~------- 71 (123)
....+...||++|.-. -|+|. =+.|+++ ..+|+|..+..| +-+ ++..+-- +.
T Consensus 266 ~~~~~~~~adv~v~pS~~E~~~~--~~lEAma------~G~PvI~s~~~g----~~e----~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 266 RVDMMYNACDVIVNCSSGEGFGL--CSAEGAV------LGKPLIISAVGG----ADD----YFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCH--HHHHHHT------TTCCEEEECCHH----HHH----HSCTTTSEEECCCEEEECT
T ss_pred HHHHHHHhCCEEEeCCCcCCCCc--HHHHHHH------cCCCEEEcCCCC----hHH----HHccCcccccccccccccc
Confidence 3455678899888632 23342 2666664 489999987532 222 2322210 00
Q ss_pred ccccc--eEEcCCHHHHHHHHHhhcC
Q 033246 72 SQRSI--LVSAPNAKELVQKLEEYVP 95 (123)
Q Consensus 72 ~~~~~--i~~~dd~ee~l~~l~~~~~ 95 (123)
..... ++-..|++++.+.| ....
T Consensus 330 ~~~G~~gl~~~~d~~~la~~i-~l~~ 354 (413)
T 3oy2_A 330 DRDGIGGIEGIIDVDDLVEAF-TFFK 354 (413)
T ss_dssp TTCSSCCEEEECCHHHHHHHH-HHTT
T ss_pred cccCcceeeCCCCHHHHHHHH-HHhc
Confidence 01134 66677999999988 7543
No 153
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=27.89 E-value=85 Score=23.10 Aligned_cols=33 Identities=12% Similarity=-0.034 Sum_probs=21.2
Q ss_pred cCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.|++|+.|.......+..+.+.. .+.|+|+++.
T Consensus 64 vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 96 (332)
T 2rjo_A 64 NLVLNVDPNDSADARVIVEACSK-----AGAYVTTIWN 96 (332)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHH-----HTCEEEEESC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHH-----CCCeEEEECC
Confidence 79999999876555555554432 2457777664
No 154
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=27.67 E-value=52 Score=21.98 Aligned_cols=54 Identities=22% Similarity=0.273 Sum_probs=36.2
Q ss_pred HHHhCCCCCcEEEEeCCCccHHHHHHHHH-HHHcCCCCcccccceEEc----CCHHHHHHHHHhh
Q 033246 34 WAQLGIHDKPVGLINVDGYYNSLLNFIDK-AVDDGFISPSQRSILVSA----PNAKELVQKLEEY 93 (123)
Q Consensus 34 ~~qlg~~~kPiilln~~gf~~~l~~~l~~-~~~~gfi~~~~~~~i~~~----dd~ee~l~~l~~~ 93 (123)
+..++-+-+|++.++.+|--+.+++.++. +-..+.| .+.+. +|.+++.+.|++.
T Consensus 10 LR~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELI------KVkvl~~~~~d~~e~a~~la~~ 68 (104)
T 1rq8_A 10 LRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELI------KVHVLQNNFDDKKELAETLSEA 68 (104)
T ss_dssp HHHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEE------EEEECCCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcE------EEEEeCCCHHHHHHHHHHHHHH
Confidence 34445557999999999999999999976 4444333 33333 3456667666664
No 155
>2o5h_A Hypothetical protein; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 1.90A {Neisseria meningitidis} SCOP: d.363.1.1
Probab=27.61 E-value=1e+02 Score=21.74 Aligned_cols=42 Identities=12% Similarity=0.169 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHHHhhcCCCC
Q 033246 56 LLNFIDKAVDDGFISPSQRSILVSAPNAKELVQKLEEYVPLHD 98 (123)
Q Consensus 56 l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~l~~~~~~~~ 98 (123)
++.+++.+.++|-|.=.. .-..+..+++|.++.+++.-|...
T Consensus 55 FF~ll~kLL~eG~iKLa~-~G~fl~Gs~~EqVe~fR~~fP~se 96 (136)
T 2o5h_A 55 FFILFKELLRRGHLKLQR-DGQIIGHTPEEWEQIFREVWPEYE 96 (136)
T ss_dssp HHHHHHHHHHTTSEEEEE-TTEECCCCHHHHHHHHHHHCCSSS
T ss_pred HHHHHHHHHhCCcEEecC-CCeeccCCHHHHHHHHHHHCCCch
Confidence 666778999999886554 445669999999999999888654
No 156
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=27.27 E-value=17 Score=31.06 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=18.3
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEE
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVG 45 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPii 45 (123)
+..|+ |++|||+|+...--..-.....-.+++|+.
T Consensus 349 ~~~Dg-IIlpGG~G~~~~~g~i~~ir~a~~~~~PiL 383 (535)
T 3nva_A 349 GNVNG-IIVLPGFGSRGAEGKIKAIKYAREHNIPFL 383 (535)
T ss_dssp TSCSE-EEECCCCSSTTHHHHHHHHHHHHHHTCCEE
T ss_pred cCCCE-EEECCCCCCccHHHHHHHHHHHHHcCCcEE
Confidence 34566 467889998643222222222223467865
No 157
>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1
Probab=27.25 E-value=1.1e+02 Score=26.20 Aligned_cols=51 Identities=22% Similarity=0.344 Sum_probs=31.8
Q ss_pred cCEEEEcCCchhhHHHHHHHHHHHHhC-CCCCcEEEEeCCCccHH--HHHHHHHHH
Q 033246 12 SDCFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNS--LLNFIDKAV 64 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt~~qlg-~~~kPiilln~~gf~~~--l~~~l~~~~ 64 (123)
.+++|++=|| ||..|+..+..+.+.. ..++-| +++.+..-++ +++.|..+-
T Consensus 609 ~~viVFvVGG-~Ty~E~~~l~~l~~~~~~~~~~v-iiGsT~I~n~~~Fl~~l~~l~ 662 (671)
T 1mqs_A 609 NKSLVFVVGG-GNYLEYQNLQEWAHSQLHNPKKV-MYGSTAITTPAEFLNEISRLG 662 (671)
T ss_dssp SEEEEEEETC-BCHHHHHHHHHHHTTCCSSCCEE-EEEESSBCCHHHHHHHHHHHH
T ss_pred CeEEEEEECC-ccHHHHHHHHHHHhhccCCCceE-EEeeccccCHHHHHHHHHHhC
Confidence 5677777777 6999999998887653 223444 4555445554 444444443
No 158
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=27.20 E-value=19 Score=27.27 Aligned_cols=15 Identities=33% Similarity=0.813 Sum_probs=10.1
Q ss_pred HHhcCEEEEcCCchhh
Q 033246 9 ARNSDCFIALPGGYGT 24 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GT 24 (123)
++..|++| +|||+|.
T Consensus 65 ~~~~dgii-l~GG~~~ 79 (273)
T 2w7t_A 65 LLGCDGIF-VPGGFGN 79 (273)
T ss_dssp HHTCSEEE-ECCCCTT
T ss_pred HhhCCEEE-ecCCCCC
Confidence 45667654 5778887
No 159
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=27.06 E-value=23 Score=23.24 Aligned_cols=41 Identities=15% Similarity=0.353 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHcCCCCcccccceEE-----cCCHHHHHHHHHhhcCCCC
Q 033246 54 NSLLNFIDKAVDDGFISPSQRSILVS-----APNAKELVQKLEEYVPLHD 98 (123)
Q Consensus 54 ~~l~~~l~~~~~~gfi~~~~~~~i~~-----~dd~ee~l~~l~~~~~~~~ 98 (123)
+.++..+..+++- |+-.++|++ -++|+.+++.+++|++..+
T Consensus 35 d~lv~hF~~iteH----P~gsDLIfYP~~~~edsPEgIv~~iKeWRa~nG 80 (87)
T 1unk_A 35 DVLLEHFVKITEH----PDGTDLIYYPSDNRDDSPEGIVKEIKEWRAANG 80 (87)
T ss_dssp HHHHHHHHHHHCC----TTTTHHHHSCCSSCCCSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCC----CCCCCeeeeCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 6677777666532 455566665 4789999999999986554
No 160
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=26.94 E-value=1.2e+02 Score=22.15 Aligned_cols=42 Identities=21% Similarity=0.220 Sum_probs=25.4
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHH-h-CCCCCcEEEEeCCCcc
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQ-L-GIHDKPVGLINVDGYY 53 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~q-l-g~~~kPiilln~~gf~ 53 (123)
...+.|+|+|| .|...+++.+.-.. . +..=+-+.+++.+.+|
T Consensus 28 ~~~~~l~lsgG-stp~~~~~~L~~~~~~~~~~w~~v~~f~~DEr~ 71 (238)
T 1y89_A 28 GQPVHISLSGG-STPKMLFKLLASQPYANDIQWKNLHFWWGDERC 71 (238)
T ss_dssp SSCEEEEECCS-HHHHHHHHHHTSTTHHHHSCGGGEEEEESEEES
T ss_pred CCCEEEEECCC-ccHHHHHHHHHhhhhccCCChhHeEEEeceecC
Confidence 34778999999 67777777664211 0 1222357777765555
No 161
>2hi6_A UPF0107 protein AF0055; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Archaeoglobus fulgidus} SCOP: c.8.2.3
Probab=26.72 E-value=19 Score=25.61 Aligned_cols=44 Identities=18% Similarity=0.416 Sum_probs=27.3
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHH
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLN 58 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~ 58 (123)
.++-+++||+|-|+.-=-.-.+++.+.|. -|..+++.+ =++++.
T Consensus 49 iagkILv~P~gkGSt~gS~vl~~l~~~g~--aPaAiI~~~--~e~Il~ 92 (141)
T 2hi6_A 49 VAGRILVFPGGKGSTVGSYVLLNLRKNGV--APKAIINKK--TETIIA 92 (141)
T ss_dssp CTTSEEEESCCSCCSSCTTHHHHHHHHTC--SCSEEEESS--CCHHHH
T ss_pred ccCeEEEecCCCCccHHHHHHHHHHHCCC--CCeEEEecC--cchhhh
Confidence 57789999999998744444444444444 455555543 455554
No 162
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=26.71 E-value=64 Score=25.79 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=35.4
Q ss_pred ccHHHHHHHHHHHHcCCCCccccc---ceEEcCCHHHHHHHHHhh
Q 033246 52 YYNSLLNFIDKAVDDGFISPSQRS---ILVSAPNAKELVQKLEEY 93 (123)
Q Consensus 52 f~~~l~~~l~~~~~~gfi~~~~~~---~i~~~dd~ee~l~~l~~~ 93 (123)
.|+.|-+-++.|+.+|.++++..+ ...+..+++|+-+.+++.
T Consensus 225 ~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~ 269 (359)
T 1m6e_X 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKE 269 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHc
Confidence 588888888999999999997655 557789999999999874
No 163
>4hdr_A ARSA; transferase; HET: DMD; 1.45A {Sporomusa ovata} PDB: 4hdm_A 4hdn_A 4hdk_A* 4hds_A
Probab=26.57 E-value=56 Score=26.37 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=22.1
Q ss_pred cCCchhhHHHHHHHHHHHHhCC---CCCcEEEE
Q 033246 18 LPGGYGTLEELLEVITWAQLGI---HDKPVGLI 47 (123)
Q Consensus 18 lPGG~GTLdEl~evlt~~qlg~---~~kPiill 47 (123)
=||+.|.|||+..-+...|=.. ..+|.+++
T Consensus 34 P~GSLG~LE~la~~la~iqg~~~P~~~~~~v~v 66 (348)
T 4hdr_A 34 SAGSLGRLEDMVEQYAGITGELNPALPKPCMVV 66 (348)
T ss_dssp SSCCCTHHHHHHHHHHHHHCCSSCCCCEEEEEE
T ss_pred CCCchHHHHHHHHHHHHHhCCCCCCCCCceEEE
Confidence 4899999999999888887653 24554444
No 164
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=26.15 E-value=1.3e+02 Score=21.56 Aligned_cols=53 Identities=17% Similarity=0.307 Sum_probs=31.5
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
..+..|++|+.|.... ++..+.+. ..+.|+|+++.. +.+..-....+++.+.|
T Consensus 69 ~~~~vdgiIi~~~~~~--~~~~~~l~-----~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G 132 (289)
T 2fep_A 69 LGKQVDGIVFMGGNIT--DEHVAEFK-----RSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKG 132 (289)
T ss_dssp HHTTCSEEEECCSCCC--HHHHHHHH-----HSSSCEEEESCCCTTCCSCEEECCHHHHHHHHHHHHHHTT
T ss_pred HhCCCCEEEEecCCCC--HHHHHHHH-----hcCCCEEEEccccCCCCCCEEEECcHHHHHHHHHHHHHCC
Confidence 3456899999986542 44444332 236788888752 12334444556777765
No 165
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=26.13 E-value=87 Score=23.43 Aligned_cols=51 Identities=14% Similarity=0.147 Sum_probs=31.4
Q ss_pred cCEEEEcCCchhhHHHHHHHHHHHHhCC-CCCcEEEEeC--CCcc-----HHHHHHHHHHHHcC
Q 033246 12 SDCFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLINV--DGYY-----NSLLNFIDKAVDDG 67 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt~~qlg~-~~kPiilln~--~gf~-----~~l~~~l~~~~~~g 67 (123)
+|.+ +.=||=||+-+.+..+. +. .+.|++=+|. .||. +.+.+.++.+.+..
T Consensus 36 ~D~v-v~lGGDGT~l~aa~~~~----~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 36 PEIV-ISIGGDGTFLSAFHQYE----ERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp CSEE-EEEESHHHHHHHHHHTG----GGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred CCEE-EEEcCcHHHHHHHHHHh----hcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 3544 44589999999887652 11 3678766675 3566 44555556555443
No 166
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=25.51 E-value=26 Score=29.94 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=18.2
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEE
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVG 45 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPii 45 (123)
++..|++ ++|||+|.-..--++-.....-..++|+.
T Consensus 353 L~~~DGI-ILpGGfGd~~~~g~i~~ir~a~e~~iPiL 388 (550)
T 1vco_A 353 FRDVSGI-LVPGGFGVRGIEGKVRAAQYARERKIPYL 388 (550)
T ss_dssp TTTCSCE-EECCCCSSTTHHHHHHHHHHHHHTTCCEE
T ss_pred HhcCCEE-EECCCCCCcchhhhHHHHHHHHHCCCcEE
Confidence 3556765 56888987533222211122223468875
No 167
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=25.47 E-value=70 Score=24.50 Aligned_cols=40 Identities=10% Similarity=0.015 Sum_probs=22.2
Q ss_pred HHHHHhcCEEEEcCCchhhHHHHHHHH-H-HHHhCCCCCcEEEE
Q 033246 6 AEMARNSDCFIALPGGYGTLEELLEVI-T-WAQLGIHDKPVGLI 47 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdEl~evl-t-~~qlg~~~kPiill 47 (123)
.-|.+.+|++++=||=. +-+ -.+.+ . ......+++|+||=
T Consensus 53 ~e~~~~a~alvIn~G~l-~~~-~~~~~~~a~~~a~~~~~PvVlD 94 (273)
T 3dzv_A 53 PQMFQQTSALVLNLGHL-SQE-REQSLLAASDYARQVNKLTVVD 94 (273)
T ss_dssp HHHHTTCSEEEEECCSC-CHH-HHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHCCeEEEecCCC-ChH-HHHHHHHHHHHHHHcCCcEEEc
Confidence 34678899999988753 322 12222 1 11233456897653
No 168
>1wx1_A Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; structural genomics; 1.97A {Thermus thermophilus HB8} PDB: 1j33_A
Probab=25.24 E-value=75 Score=25.40 Aligned_cols=29 Identities=21% Similarity=0.156 Sum_probs=21.3
Q ss_pred cCCchhhHHHHHHHHHHHHhCC---CCCcEEE
Q 033246 18 LPGGYGTLEELLEVITWAQLGI---HDKPVGL 46 (123)
Q Consensus 18 lPGG~GTLdEl~evlt~~qlg~---~~kPiil 46 (123)
=||+.|.|||+..-+...|=.. ..+|.++
T Consensus 19 P~gsLG~LE~la~~la~i~g~~~p~~~~~~v~ 50 (335)
T 1wx1_A 19 PPRALGYLEEVALRLAALQGRVKPELGRGAVV 50 (335)
T ss_dssp CTTTTHHHHHHHHHHHHHHTCSSCCCCCEEEE
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCCCCCcEEE
Confidence 3899999999999888877542 2455443
No 169
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=25.06 E-value=1.1e+02 Score=22.70 Aligned_cols=33 Identities=9% Similarity=0.076 Sum_probs=22.2
Q ss_pred hcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 11 NSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 11 ~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
..|++|+.| ......++.+.+ ...+.|+|+++.
T Consensus 62 ~vDgiIi~~-~~~~~~~~~~~~-----~~~giPvV~~~~ 94 (350)
T 3h75_A 62 KPDYLMLVN-EQYVAPQILRLS-----QGSGIKLFIVNS 94 (350)
T ss_dssp CCSEEEEEC-CSSHHHHHHHHH-----TTSCCEEEEEES
T ss_pred CCCEEEEeC-chhhHHHHHHHH-----HhCCCcEEEEcC
Confidence 789999998 333455555443 235778888876
No 170
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=24.60 E-value=1.1e+02 Score=21.83 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=30.7
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
....|++|+.|.... ++..+.+.. .+.|+|+++.. +.+..-....+++.+.|
T Consensus 65 ~~~vdgiIi~~~~~~--~~~~~~l~~-----~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G 127 (290)
T 2rgy_A 65 GRDCDGVVVISHDLH--DEDLDELHR-----MHPKMVFLNRAFDALPDASFCPDHRRGGELAAATLIEHG 127 (290)
T ss_dssp HTTCSEEEECCSSSC--HHHHHHHHH-----HCSSEEEESSCCTTSGGGEECCCHHHHHHHHHHHHHHTT
T ss_pred hcCccEEEEecCCCC--HHHHHHHhh-----cCCCEEEEccccCCCCCCEEEeCcHHHHHHHHHHHHHCC
Confidence 456899999987654 444443321 25788888752 12233344456777765
No 171
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=24.56 E-value=1.2e+02 Score=22.31 Aligned_cols=37 Identities=11% Similarity=-0.030 Sum_probs=24.8
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+.+..|++|+.|-....+.+..+.+.. .+.|+|+++.
T Consensus 57 i~~~vdgiii~~~~~~~~~~~~~~a~~-----~gipvV~~d~ 93 (316)
T 1tjy_A 57 VNQGYDAIIVSAVSPDGLCPALKRAMQ-----RGVKILTWDS 93 (316)
T ss_dssp HHTTCSEEEECCSSSSTTHHHHHHHHH-----TTCEEEEESS
T ss_pred HHcCCCEEEEeCCCHHHHHHHHHHHHH-----CcCEEEEecC
Confidence 345689999999776666666554432 3568877764
No 172
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=24.43 E-value=52 Score=23.55 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=20.4
Q ss_pred cCEEEEcCCchhhHHHH----HHHHHHHHhC-CCCCcEEEEeC
Q 033246 12 SDCFIALPGGYGTLEEL----LEVITWAQLG-IHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl----~evlt~~qlg-~~~kPiilln~ 49 (123)
.|++ ++|||.|..... -.+..|.+-- ...|+|.-+-.
T Consensus 75 ~D~l-ivpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~ 116 (209)
T 3er6_A 75 TNIL-IIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDT 116 (209)
T ss_dssp CSEE-EECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETT
T ss_pred CCEE-EECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcH
Confidence 4655 569998865432 2334443332 35677776643
No 173
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=24.26 E-value=1.2e+02 Score=22.45 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=21.2
Q ss_pred cCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+|.+ +.=||=||+.+.+..+ .. .+|++=+|.
T Consensus 42 ~D~v-v~~GGDGTll~~a~~~-----~~-~~PilGIn~ 72 (258)
T 1yt5_A 42 ADLI-VVVGGDGTVLKAAKKA-----AD-GTPMVGFKA 72 (258)
T ss_dssp CSEE-EEEECHHHHHHHHTTB-----CT-TCEEEEEES
T ss_pred CCEE-EEEeCcHHHHHHHHHh-----CC-CCCEEEEEC
Confidence 4544 5558999999988554 23 788766664
No 174
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=24.04 E-value=1.1e+02 Score=23.15 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHH-----HHHHHHHHcC
Q 033246 24 TLEELLEVITWAQLGIHDKPVGLINVDGYYNSLL-----NFIDKAVDDG 67 (123)
Q Consensus 24 TLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~-----~~l~~~~~~g 67 (123)
|++.+++.+.-.+-. .+.||+++ +||+++. .+++.+.+.|
T Consensus 75 ~~~~~~~~v~~ir~~-~~~Pii~m---~y~n~v~~~g~~~f~~~~~~aG 119 (271)
T 1ujp_A 75 SVQGALELVREVRAL-TEKPLFLM---TYLNPVLAWGPERFFGLFKQAG 119 (271)
T ss_dssp CHHHHHHHHHHHHHH-CCSCEEEE---CCHHHHHHHCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhc-CCCCEEEE---ecCcHHHHhhHHHHHHHHHHcC
Confidence 556666666544332 47899998 5999654 5666666665
No 175
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=24.04 E-value=2.9e+02 Score=22.88 Aligned_cols=76 Identities=14% Similarity=0.106 Sum_probs=43.7
Q ss_pred cCEEEE--c--CCchhhH-HHHHHHHHHHHhCC-CCCcEEEEe-CCCc---cHHHHHHHHHHHHcCCCCcccccceEEcC
Q 033246 12 SDCFIA--L--PGGYGTL-EELLEVITWAQLGI-HDKPVGLIN-VDGY---YNSLLNFIDKAVDDGFISPSQRSILVSAP 81 (123)
Q Consensus 12 sDa~I~--l--PGG~GTL-dEl~evlt~~qlg~-~~kPiilln-~~gf---~~~l~~~l~~~~~~gfi~~~~~~~i~~~d 81 (123)
.|++++ . |++.... +++.+++.-.+-.. .+||++++. ..|. -....+..+.+.+.| +...+
T Consensus 329 vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~~~~~~~~~~L~~aG---------Ip~f~ 399 (480)
T 3dmy_A 329 VRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAG---------IAVVS 399 (480)
T ss_dssp EEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHHTT---------CEECS
T ss_pred CCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccchhhHHHHHHHHHhCC---------CcccC
Confidence 466655 4 6766554 77877775443332 278953332 2122 112222334455544 67899
Q ss_pred CHHHHHHHHHhhcCC
Q 033246 82 NAKELVQKLEEYVPL 96 (123)
Q Consensus 82 d~ee~l~~l~~~~~~ 96 (123)
+|++++..+......
T Consensus 400 spe~Av~a~~~l~~~ 414 (480)
T 3dmy_A 400 SLPEATLLAAALIHP 414 (480)
T ss_dssp SHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999887643
No 176
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=24.00 E-value=98 Score=23.82 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=25.7
Q ss_pred cCEEEEcCCchh-----hHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYG-----TLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~G-----TLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+||+.++|--++ |-+|+.+-+.-.- ...+.||++||+
T Consensus 104 adavlv~~Pyy~~~~~~s~~~l~~~f~~va-~a~~lPiilYn~ 145 (309)
T 3fkr_A 104 AAMVMAMPPYHGATFRVPEAQIFEFYARVS-DAIAIPIMVQDA 145 (309)
T ss_dssp CSEEEECCSCBTTTBCCCHHHHHHHHHHHH-HHCSSCEEEEEC
T ss_pred CCEEEEcCCCCccCCCCCHHHHHHHHHHHH-HhcCCCEEEEeC
Confidence 799888887653 6788776553321 123799999997
No 177
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=23.40 E-value=89 Score=22.99 Aligned_cols=34 Identities=18% Similarity=0.077 Sum_probs=26.0
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEe
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLIN 48 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln 48 (123)
..+.+++.+-|-+++|+++.+.+- .++||+++.-
T Consensus 30 s~~~~ifll~g~I~~L~~iv~~ik-----~~gK~vivh~ 63 (188)
T 1vkf_A 30 IEPDVVFLLKSDILNLKFHLKILK-----DRGKTVFVDM 63 (188)
T ss_dssp CCSSEEEECCEETTTHHHHHHHHH-----HTTCEEEEEG
T ss_pred CCCCEEEEEeCcHHHHHHHHHHHH-----HCCCeEEEec
Confidence 346778888999999999987774 3578888763
No 178
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=23.30 E-value=43 Score=26.13 Aligned_cols=13 Identities=8% Similarity=0.238 Sum_probs=6.7
Q ss_pred cCCHHHHHHHHHh
Q 033246 80 APNAKELVQKLEE 92 (123)
Q Consensus 80 ~dd~ee~l~~l~~ 92 (123)
..||.++.+.+..
T Consensus 222 a~dP~~ma~af~~ 234 (265)
T 1wv2_A 222 AKDPVMMAEAMKH 234 (265)
T ss_dssp SSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4556655554443
No 179
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=23.15 E-value=1.3e+02 Score=21.33 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=31.4
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC------------CccHHHHHHHHHHHHcC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD------------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~------------gf~~~l~~~l~~~~~~g 67 (123)
....|++|++|.... ++..+.+.. .+.|+|+++.. +++..-....+++.+.|
T Consensus 67 ~~~vdgiIi~~~~~~--~~~~~~l~~-----~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G 130 (292)
T 3k4h_A 67 GRQIGGIILLYSREN--DRIIQYLHE-----QNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLG 130 (292)
T ss_dssp TTCCCEEEESCCBTT--CHHHHHHHH-----TTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeCCCCC--hHHHHHHHH-----CCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCC
Confidence 356899999987643 344444432 36788887753 12334445556777765
No 180
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.03 E-value=12 Score=21.10 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCCcccccceEEcCCHHHHHHHHHh
Q 033246 59 FIDKAVDDGFISPSQRSILVSAPNAKELVQKLEE 92 (123)
Q Consensus 59 ~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~l~~ 92 (123)
.++++++-||=.......+..+.+++.++++|-+
T Consensus 12 ~v~~L~~MGF~~~~a~~AL~~~~n~e~A~~~L~~ 45 (47)
T 2ekk_A 12 QLQQLMDMGFTREHAMEALLNTSTMEQATEYLLT 45 (47)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHSCSHHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHHHHHHcCCHHHHHHHHHc
Confidence 3456777788777777777667789999988854
No 181
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=22.89 E-value=1.5e+02 Score=22.11 Aligned_cols=41 Identities=27% Similarity=0.452 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHH-----HHHHHHHHHcC
Q 033246 24 TLEELLEVITWAQLGIHDKPVGLINVDGYYNSL-----LNFIDKAVDDG 67 (123)
Q Consensus 24 TLdEl~evlt~~qlg~~~kPiilln~~gf~~~l-----~~~l~~~~~~g 67 (123)
|++.+++++...+-...+.|++++ +||+++ ..+++.+.+.|
T Consensus 77 ~~~~~~~~v~~ir~~~~~~Pi~~m---~y~n~v~~~g~~~f~~~~~~aG 122 (262)
T 2ekc_A 77 RFEDVLELSETLRKEFPDIPFLLM---TYYNPIFRIGLEKFCRLSREKG 122 (262)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEE---CCHHHHHHHCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcC
Confidence 455566655444322227899997 599975 45567777766
No 182
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=22.77 E-value=2.2e+02 Score=22.66 Aligned_cols=70 Identities=9% Similarity=0.044 Sum_probs=41.2
Q ss_pred HHHhcCE-EEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHH-HcCCCCcccccceEEcCCHHH
Q 033246 8 MARNSDC-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAV-DDGFISPSQRSILVSAPNAKE 85 (123)
Q Consensus 8 m~~~sDa-~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~-~~gfi~~~~~~~i~~~dd~ee 85 (123)
++.++++ .++-=||.||+-|... +.+|++++-. +.|+..+ -+.++ +.|.--.-. . .-+.++
T Consensus 366 ~L~h~~~~~~vth~G~~s~~Eal~---------~GvP~i~~P~--~~dQ~~n-a~~~~~~~G~g~~l~-~----~~~~~~ 428 (482)
T 2pq6_A 366 VLNHPSIGGFLTHCGWNSTTESIC---------AGVPMLCWPF--FADQPTD-CRFICNEWEIGMEID-T----NVKREE 428 (482)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHHH---------HTCCEEECCC--STTHHHH-HHHHHHTSCCEEECC-S----SCCHHH
T ss_pred HhcCCCCCEEEecCCcchHHHHHH---------cCCCEEecCc--ccchHHH-HHHHHHHhCEEEEEC-C----CCCHHH
Confidence 3444555 6777899999988762 3899999963 4555443 23454 345321100 1 136777
Q ss_pred HHHHHHhhc
Q 033246 86 LVQKLEEYV 94 (123)
Q Consensus 86 ~l~~l~~~~ 94 (123)
+.+.+++..
T Consensus 429 l~~~i~~ll 437 (482)
T 2pq6_A 429 LAKLINEVI 437 (482)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 183
>4hdr_B ARSB; transferase; HET: DMD; 1.45A {Sporomusa ovata} PDB: 4hdm_B 4hdn_B 4hdk_B* 4hds_B
Probab=22.71 E-value=86 Score=25.28 Aligned_cols=21 Identities=5% Similarity=-0.092 Sum_probs=18.1
Q ss_pred cCCchhhHHHHHHHHHHHHhC
Q 033246 18 LPGGYGTLEELLEVITWAQLG 38 (123)
Q Consensus 18 lPGG~GTLdEl~evlt~~qlg 38 (123)
=||+.|.|||+..-+...|=.
T Consensus 30 P~GSLG~LE~la~~la~iqg~ 50 (350)
T 4hdr_B 30 PLNSLHSFEHIACKLAGISGN 50 (350)
T ss_dssp CTTTTTHHHHHHHHHHHHHCC
T ss_pred CCccHHHHHHHHHHHHHhhCC
Confidence 389999999999988888755
No 184
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=22.68 E-value=78 Score=22.50 Aligned_cols=35 Identities=11% Similarity=0.221 Sum_probs=21.6
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
...|++|+.|...-...+..+.+. ..+.|+|+++.
T Consensus 56 ~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~i~~ 90 (271)
T 2dri_A 56 RGTKILLINPTDSDAVGNAVKMAN-----QANIPVITLDR 90 (271)
T ss_dssp TTEEEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred cCCCEEEEeCCChHHHHHHHHHHH-----HCCCcEEEecC
Confidence 458999999876444344443332 13568888765
No 185
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.58 E-value=1.3e+02 Score=22.83 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=24.6
Q ss_pred cCEEEEcCCch--hhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGY--GTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~--GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+||+.++|=.+ .|-+|+.+-+.-.- ...+.||++||.
T Consensus 97 adavlv~~P~y~~~s~~~l~~~f~~ia-~a~~lPiilYn~ 135 (292)
T 2ojp_A 97 IVGCLTVTPYYNRPSQEGLYQHFKAIA-EHTDLPQILYNV 135 (292)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHH-TTCSSCEEEECC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHH-HhcCCCEEEEeC
Confidence 68877776655 37777776654322 234789999996
No 186
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=22.54 E-value=1.7e+02 Score=21.72 Aligned_cols=22 Identities=9% Similarity=0.028 Sum_probs=13.9
Q ss_pred EEEEcCCchhhHHHHHHHHHHH
Q 033246 14 CFIALPGGYGTLEELLEVITWA 35 (123)
Q Consensus 14 a~I~lPGG~GTLdEl~evlt~~ 35 (123)
+++|..++.||++.+...+...
T Consensus 164 VILV~~~~lg~i~~~~lt~~~l 185 (242)
T 3qxc_A 164 MLLISHDNLGLINDCLLNDFLL 185 (242)
T ss_dssp EEEEECCSTTHHHHHHHHHHHH
T ss_pred EEEEEcCCCcHHHHHHHHHHHH
Confidence 5666666677777666555443
No 187
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=22.47 E-value=1.3e+02 Score=23.57 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=25.5
Q ss_pred hcCEEEEcCCch--hhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 11 NSDCFIALPGGY--GTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 11 ~sDa~I~lPGG~--GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
=+||+.++|=-+ .|-+|+.+-+.-.- ...+.||++||+
T Consensus 126 Gadavlv~~P~Y~~~s~~~l~~~f~~VA-~a~~lPiilYn~ 165 (343)
T 2v9d_A 126 GADGIVVINPYYWKVSEANLIRYFEQVA-DSVTLPVMLYNF 165 (343)
T ss_dssp TCSEEEEECCSSSCCCHHHHHHHHHHHH-HTCSSCEEEEEC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHH-HhcCCCEEEEeC
Confidence 378887777665 37777776554322 134789999996
No 188
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=22.38 E-value=1.5e+02 Score=21.25 Aligned_cols=52 Identities=12% Similarity=0.063 Sum_probs=32.1
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
....|++|+.|..... +..+.+.. .+.|+|+++.. +.+..-....+++.+.|
T Consensus 63 ~~~vdGiIi~~~~~~~--~~~~~l~~-----~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G 125 (294)
T 3qk7_A 63 TRRVDALIVAHTQPED--FRLQYLQK-----QNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELG 125 (294)
T ss_dssp HTCCSEEEECSCCSSC--HHHHHHHH-----TTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeCCCCCh--HHHHHHHh-----CCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCC
Confidence 3479999999976543 44443332 36788887752 13444555567777765
No 189
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=22.19 E-value=74 Score=24.41 Aligned_cols=39 Identities=26% Similarity=0.246 Sum_probs=22.0
Q ss_pred HHHHHhcCEEEEcCCchhhHHH--HHHHHH-HHHhCCCCCcEEEE
Q 033246 6 AEMARNSDCFIALPGGYGTLEE--LLEVIT-WAQLGIHDKPVGLI 47 (123)
Q Consensus 6 ~~m~~~sDa~I~lPGG~GTLdE--l~evlt-~~qlg~~~kPiill 47 (123)
.-|...|||+++-+ ||+++ +-.... ...-..+++|+||=
T Consensus 51 ~e~~~~a~al~iNi---Gtl~~~~~~~m~~A~~~A~~~~~PvVLD 92 (265)
T 3hpd_A 51 EEMIRLADAVVINI---GTLDSGWRRSMVKATEIANELGKPIVLD 92 (265)
T ss_dssp HHHHHHCSEEEEEC---TTCCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHCCeEEEEC---CCCChHHHHHHHHHHHHHHHcCCCEEEc
Confidence 34788999999854 45433 111111 12223468998863
No 190
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=21.68 E-value=3.1e+02 Score=21.88 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=43.4
Q ss_pred cCE-EEEcCCchhhHHHHHHHHHHHHhC-CCCCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHH
Q 033246 12 SDC-FIALPGGYGTLEELLEVITWAQLG-IHDKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPNAKELVQK 89 (123)
Q Consensus 12 sDa-~I~lPGG~GTLdEl~evlt~~qlg-~~~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd~ee~l~~ 89 (123)
.|+ ||...||+=..+++.+.+.-.--. .++|||++--...-++.-.+. +.+.| . .++.++|++++.+.
T Consensus 318 v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl~G~n~~~g~~~---L~~~g------l-~~~~~~~~~~Aa~~ 387 (395)
T 2fp4_B 318 VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNI---LTNSG------L-PITSAVDLEDAAKK 387 (395)
T ss_dssp CCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEEETTHHHHHHH---HHHTC------S-CCEECSSHHHHHHH
T ss_pred CCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEcCCCCHHHHHHH---HHHCC------C-ceEeCCCHHHHHHH
Confidence 455 444679998899988866532222 257999974322233333332 33434 1 34467999999988
Q ss_pred HHhh
Q 033246 90 LEEY 93 (123)
Q Consensus 90 l~~~ 93 (123)
+.+.
T Consensus 388 ~v~~ 391 (395)
T 2fp4_B 388 AVAS 391 (395)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7654
No 191
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=21.65 E-value=1.4e+02 Score=21.54 Aligned_cols=52 Identities=12% Similarity=0.154 Sum_probs=32.0
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
....|++|++|.... ++..+.+. ..+.|+|+++.. +.+..-....+++.+.|
T Consensus 81 ~~~vdgiIi~~~~~~--~~~~~~l~-----~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G 143 (305)
T 3huu_A 81 SKSVDGFILLYSLKD--DPIEHLLN-----EFKVPYLIVGKSLNYENIIHIDNDNIDAAYQLTQYLYHLG 143 (305)
T ss_dssp TTCCSEEEESSCBTT--CHHHHHHH-----HTTCCEEEESCCCSSTTCCEEECCHHHHHHHHHHHHHHTT
T ss_pred hCCCCEEEEeCCcCC--cHHHHHHH-----HcCCCEEEECCCCcccCCcEEEeCHHHHHHHHHHHHHHCC
Confidence 356899999987653 34444332 246788888753 13334445556777765
No 192
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=21.64 E-value=59 Score=21.36 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=35.3
Q ss_pred hCCCCCcEEEEeCCCccHHHHHHHHH-HHHcCCCCcccccceEEc----CCHHHHHHHHHhhc
Q 033246 37 LGIHDKPVGLINVDGYYNSLLNFIDK-AVDDGFISPSQRSILVSA----PNAKELVQKLEEYV 94 (123)
Q Consensus 37 lg~~~kPiilln~~gf~~~l~~~l~~-~~~~gfi~~~~~~~i~~~----dd~ee~l~~l~~~~ 94 (123)
.+-+-+|++.++.+|--+.+++.++. +-..+.| .+.+. +|.+++.+.|++..
T Consensus 14 ~ah~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELI------KVkvl~~~~~~~~e~a~~la~~t 70 (98)
T 1jo0_A 14 LAHHLNPVVMLGGNGLTEGVLAEIENALNHHELI------KVKVAGADRETKQLIINAIVRET 70 (98)
T ss_dssp HHTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEE------EEEETTCCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCeE------EEEEeCCCHHHHHHHHHHHHHHh
Confidence 33456899999999999999999875 4443333 33333 34566677776643
No 193
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=21.60 E-value=95 Score=21.74 Aligned_cols=54 Identities=11% Similarity=0.058 Sum_probs=31.4
Q ss_pred HHHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 8 MARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 8 m~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
.....|++|+.|...-+ ++..+.+. ..+.|+|+++.. +.+..-....+++.+.|
T Consensus 55 ~~~~vdgiIi~~~~~~~-~~~~~~~~-----~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G 119 (272)
T 3o74_A 55 RARRCDALFVASCLPPE-DDSYRELQ-----DKGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSA 119 (272)
T ss_dssp HHTTCSEEEECCCCCSS-CCHHHHHH-----HTTCCEEEESSCCCTTTCEEEEECHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEEecCcccc-HHHHHHHH-----HcCCCEEEEccCCCccccCEEEEchHHHHHHHHHHHHHCC
Confidence 34578999999876323 44444332 246788887752 13333444456677655
No 194
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=21.54 E-value=81 Score=22.69 Aligned_cols=35 Identities=9% Similarity=-0.149 Sum_probs=21.8
Q ss_pred HhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 10 RNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 10 ~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+..|++|+.|...-..++..+.+. ..+.|+|+++.
T Consensus 58 ~~vdgiIi~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 92 (288)
T 1gud_A 58 KNYKGIAFAPLSSVNLVMPVARAW-----KKGIYLVNLDE 92 (288)
T ss_dssp SSEEEEEECCSSSSTTHHHHHHHH-----HTTCEEEEESS
T ss_pred cCCCEEEEeCCChHHHHHHHHHHH-----HCCCeEEEECC
Confidence 458999999876543344443332 13568888875
No 195
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=21.50 E-value=56 Score=25.61 Aligned_cols=23 Identities=30% Similarity=0.414 Sum_probs=16.5
Q ss_pred hHHHHHHHhcCEEEEc---CCchhhH
Q 033246 3 QRKAEMARNSDCFIAL---PGGYGTL 25 (123)
Q Consensus 3 eRK~~m~~~sDa~I~l---PGG~GTL 25 (123)
++-+.+++.||.|+++ .||.||=
T Consensus 87 d~I~~~le~~d~~~i~as~GGGTGSG 112 (320)
T 1ofu_A 87 ERISEVLEGADMVFITTGMGGGTGTG 112 (320)
T ss_dssp HHHHHHHTTCSEEEEEEETTSSHHHH
T ss_pred HHHHHHHhhCCEEEEEeecCCCcccc
Confidence 4556677889997664 8888773
No 196
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=21.41 E-value=87 Score=23.71 Aligned_cols=36 Identities=22% Similarity=0.160 Sum_probs=24.8
Q ss_pred hcCEEEEcCCchh---hHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 11 NSDCFIALPGGYG---TLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 11 ~sDa~I~lPGG~G---TLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
=+||+.++|=.+. |-+|+.+=+.-.-= +.||++||.
T Consensus 88 Gadavlv~~P~y~~~~~~~~l~~~f~~va~---~lPiilYn~ 126 (283)
T 2pcq_A 88 GAMALLATPPRYYHGSLGAGLLRYYEALAE---KMPLFLYHV 126 (283)
T ss_dssp TCSEEEECCCCTTGGGTTTHHHHHHHHHHH---HSCEEEEEC
T ss_pred CCCEEEecCCcCCCCCCHHHHHHHHHHHhc---CCCEEEEeC
Confidence 3799888777664 55777765533221 789999996
No 197
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=21.39 E-value=1.7e+02 Score=18.70 Aligned_cols=57 Identities=19% Similarity=0.267 Sum_probs=31.9
Q ss_pred HhcCE-EEEcC---Cch---hhHHHHHHHHHHHHhCCCCCcEEEEeCCCcc-HHHHHHHH-HHHHcCCC
Q 033246 10 RNSDC-FIALP---GGY---GTLEELLEVITWAQLGIHDKPVGLINVDGYY-NSLLNFID-KAVDDGFI 69 (123)
Q Consensus 10 ~~sDa-~I~lP---GG~---GTLdEl~evlt~~qlg~~~kPiilln~~gf~-~~l~~~l~-~~~~~gfi 69 (123)
..+|+ ++..| ||. |.+..+++-+.- . ..+||++++..-|.. ..-...++ .+.+.|+.
T Consensus 44 ~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~--~-l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~ 109 (138)
T 5nul_A 44 LNEDILILGCSAMTDEVLEESEFEPFIEEIST--K-ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCV 109 (138)
T ss_dssp TTCSEEEEEECCBTTTBCCTTTHHHHHHHHGG--G-CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCE
T ss_pred hhCCEEEEEcCccCCCCCChHHHHHHHHHHHh--h-cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCE
Confidence 45666 44455 332 256777765431 1 568999999875432 34444454 45565653
No 198
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=21.37 E-value=1.4e+02 Score=23.07 Aligned_cols=73 Identities=14% Similarity=0.149 Sum_probs=41.8
Q ss_pred HHHHHhcCEEEEcC--CchhhHHHHHHHHHHHHhCCCCCcEEEEeCCCccHHHHHHHHHHHHcCC----CCcccccceEE
Q 033246 6 AEMARNSDCFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLINVDGYYNSLLNFIDKAVDDGF----ISPSQRSILVS 79 (123)
Q Consensus 6 ~~m~~~sDa~I~lP--GG~GTLdEl~evlt~~qlg~~~kPiilln~~gf~~~l~~~l~~~~~~gf----i~~~~~~~i~~ 79 (123)
..+...||+||.-- -|+|.- +.|+++. .+|+|..+..| +-+ ++..|- ........++-
T Consensus 361 ~~~~~~adv~v~pS~~E~~g~~--~lEAma~------G~PvI~s~~gg----~~e----~v~~~~~~~~~~~~~~G~l~~ 424 (485)
T 2qzs_A 361 HRIMGGADVILVPSRFEPCGLT--QLYGLKY------GTLPLVRRTGG----LAD----TVSDCSLENLADGVASGFVFE 424 (485)
T ss_dssp HHHHHHCSEEEECCSCCSSCSH--HHHHHHH------TCEEEEESSHH----HHH----HCCBCCHHHHHTTCCCBEEEC
T ss_pred HHHHHhCCEEEECCccCCCcHH--HHHHHHC------CCCEEECCCCC----ccc----eeccCccccccccccceEEEC
Confidence 45678899977532 255543 6777765 89999998642 222 222210 00002333444
Q ss_pred cCCHHHHHHHHHhhc
Q 033246 80 APNAKELVQKLEEYV 94 (123)
Q Consensus 80 ~dd~ee~l~~l~~~~ 94 (123)
.+|++++.+.|....
T Consensus 425 ~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 425 DSNAWSLLRAIRRAF 439 (485)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 458888888776653
No 199
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=20.88 E-value=1.2e+02 Score=23.07 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=23.9
Q ss_pred cCEEEEcCCchh--hHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYG--TLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~G--TLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+||++++|=-+. |-+|+.+-+.-.. ...+.||++||.
T Consensus 96 adavlv~~P~y~~~s~~~l~~~f~~ia-~a~~lPiilYn~ 134 (292)
T 2vc6_A 96 ADGVLIVSPYYNKPTQEGIYQHFKAID-AASTIPIIVYNI 134 (292)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHH-HHCSSCEEEEEC
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHH-HhCCCCEEEEeC
Confidence 788877776553 6677776443211 123689999996
No 200
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=20.71 E-value=1.7e+02 Score=22.19 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=23.1
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
.+.+|.+|+ =||=||+.+....+.- .++|++=+|.
T Consensus 73 ~~~~d~vi~-~GGDGT~l~a~~~~~~-----~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCELVLV-LGGDGTFLRAAELARN-----ASIPVLGVNL 107 (307)
T ss_dssp ---CCCEEE-EECHHHHHHHHHHHHH-----HTCCEEEEEC
T ss_pred ccCCCEEEE-EeCCHHHHHHHHHhcc-----CCCCEEEEeC
Confidence 344566655 5899999999987753 2568766664
No 201
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=20.64 E-value=98 Score=23.72 Aligned_cols=37 Identities=22% Similarity=0.106 Sum_probs=24.2
Q ss_pred cCEEEEcCCch--hhHHHHHHHHHHHHhCCCC-CcEEEEeC
Q 033246 12 SDCFIALPGGY--GTLEELLEVITWAQLGIHD-KPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~--GTLdEl~evlt~~qlg~~~-kPiilln~ 49 (123)
+||+.++|=.+ .|-+++.+-+.-.-= ..+ .||++||+
T Consensus 107 adavlv~~P~y~~~s~~~l~~~f~~va~-a~~~lPiilYn~ 146 (303)
T 2wkj_A 107 FDAVSAVTPFYYPFSFEEHCDHYRAIID-SADGLPMVVYNI 146 (303)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHH-HHTTCCEEEEEC
T ss_pred CCEEEecCCCCCCCCHHHHHHHHHHHHH-hCCCCCEEEEeC
Confidence 78887777655 377777765532211 225 89999996
No 202
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=20.59 E-value=1.8e+02 Score=20.71 Aligned_cols=52 Identities=10% Similarity=0.038 Sum_probs=31.4
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCC-----------CccHHHHHHHHHHHHcC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVD-----------GYYNSLLNFIDKAVDDG 67 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~-----------gf~~~l~~~l~~~~~~g 67 (123)
....|++|++|.... ++..+.+. ..+.|+|+++.. +++..-....+++.+.|
T Consensus 64 ~~~vdgiIi~~~~~~--~~~~~~l~-----~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G 126 (288)
T 3gv0_A 64 TGSADGVIISKIEPN--DPRVRFMT-----ERNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCG 126 (288)
T ss_dssp HTCCSEEEEESCCTT--CHHHHHHH-----HTTCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTT
T ss_pred cCCccEEEEecCCCC--cHHHHHHh-----hCCCCEEEECCcCCCCCCcEEEeCcHHHHHHHHHHHHHCC
Confidence 367899999985533 24443332 246788887652 13444555567777765
No 203
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=20.59 E-value=1.2e+02 Score=23.15 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=24.4
Q ss_pred cCEEEEcCCchh----hHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYG----TLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~G----TLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+||+.++|=-+- |-+|+.+-+.-.- ...+.||++||.
T Consensus 110 adavlv~~P~y~~~~~s~~~l~~~f~~ia-~a~~lPiilYn~ 150 (307)
T 3s5o_A 110 ADAAMVVTPCYYRGRMSSAALIHHYTKVA-DLSPIPVVLYSV 150 (307)
T ss_dssp CSEEEEECCCTTGGGCCHHHHHHHHHHHH-HHCSSCEEEEEC
T ss_pred CCEEEEcCCCcCCCCCCHHHHHHHHHHHH-hhcCCCEEEEeC
Confidence 788777665542 6777776554321 124789999997
No 204
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=20.53 E-value=1.6e+02 Score=22.58 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=24.5
Q ss_pred cCEEEEcCCch--hhHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGY--GTLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~--GTLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+||+.++|=.+ .|-+|+.+-+.-.- ...+.||++||.
T Consensus 108 adavlv~~P~y~~~s~~~l~~~f~~va-~a~~lPiilYn~ 146 (306)
T 1o5k_A 108 ANGVLVVTPYYNKPTQEGLYQHYKYIS-ERTDLGIVVYNV 146 (306)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHH-TTCSSCEEEEEC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHH-HhCCCCEEEEeC
Confidence 78877776655 36677776554321 234789999996
No 205
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=20.36 E-value=1.3e+02 Score=22.89 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=24.7
Q ss_pred cCEEEEcCCchh--hHHHHHHHHHHHHhCCCCCcEEEEeC
Q 033246 12 SDCFIALPGGYG--TLEELLEVITWAQLGIHDKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~G--TLdEl~evlt~~qlg~~~kPiilln~ 49 (123)
+||+.++|=-+. |-+++.+-+.-.- ...+.||++||+
T Consensus 96 adavlv~~P~y~~~s~~~l~~~f~~va-~a~~lPiilYn~ 134 (297)
T 2rfg_A 96 ADAVLCVAGYYNRPSQEGLYQHFKMVH-DAIDIPIIVYNI 134 (297)
T ss_dssp CSEEEECCCTTTCCCHHHHHHHHHHHH-HHCSSCEEEEEC
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHH-HhcCCCEEEEeC
Confidence 789888776653 6677775553221 123689999996
No 206
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=20.21 E-value=1.1e+02 Score=23.34 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=24.2
Q ss_pred cCEEEEcCCch---hhHHHHHHHHHHHHhCCC---CCcEEEEeC
Q 033246 12 SDCFIALPGGY---GTLEELLEVITWAQLGIH---DKPVGLINV 49 (123)
Q Consensus 12 sDa~I~lPGG~---GTLdEl~evlt~~qlg~~---~kPiilln~ 49 (123)
+||+.++|-.+ -|-+++.+-+.-.-= .. +.||++||.
T Consensus 99 adavlv~~P~y~~~~s~~~l~~~f~~va~-a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 99 ARNILLAPPSYFKNVSDDGLFAWFSAVFS-KIGKDARDILVYNI 141 (294)
T ss_dssp CSEEEECCCCSSCSCCHHHHHHHHHHHHH-HHCTTCCCEEEEEC
T ss_pred CCEEEEcCCcCCCCCCHHHHHHHHHHHHH-hcCCCCCcEEEEEC
Confidence 78887776554 377777765543211 22 689999996
No 207
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=20.19 E-value=1.6e+02 Score=21.20 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=30.8
Q ss_pred HHhcCEEEEcCCchhhHHHHHHHHHHHHhCCCCCcEEEEeCCC-------------ccHHHHHHHHHHHHcC
Q 033246 9 ARNSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLINVDG-------------YYNSLLNFIDKAVDDG 67 (123)
Q Consensus 9 ~~~sDa~I~lPGG~GTLdEl~evlt~~qlg~~~kPiilln~~g-------------f~~~l~~~l~~~~~~g 67 (123)
....|++|++|.... ++..+.+. ..+.|+|+++..- .+..-....+++.+.|
T Consensus 66 ~~~vdGiI~~~~~~~--~~~~~~l~-----~~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G 130 (295)
T 3hcw_A 66 QRMVDAFILLYSKEN--DPIKQMLI-----DESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQG 130 (295)
T ss_dssp TTCCSEEEESCCCTT--CHHHHHHH-----HTTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHHC
T ss_pred hCCcCEEEEcCcccC--hHHHHHHH-----hCCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHcC
Confidence 356899999986542 34444333 2467888887521 2333444456777765
No 208
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=20.09 E-value=2.5e+02 Score=20.09 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=51.7
Q ss_pred EEEEcCCchh-------hHHHHHHHHHHHHhCCC--CCcEEEEeCCCccHHHHHHHHHHHHcCCCCcccccceEEcCC--
Q 033246 14 CFIALPGGYG-------TLEELLEVITWAQLGIH--DKPVGLINVDGYYNSLLNFIDKAVDDGFISPSQRSILVSAPN-- 82 (123)
Q Consensus 14 a~I~lPGG~G-------TLdEl~evlt~~qlg~~--~kPiilln~~gf~~~l~~~l~~~~~~gfi~~~~~~~i~~~dd-- 82 (123)
.+|+=-.|++ ++.-+-.++...|-... -+-++++|.--+++.++++++ .|+++...+.++|..+
T Consensus 139 ~~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vk-----pfl~~~t~~Ki~~~~~~~ 213 (262)
T 1r5l_A 139 KAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIK-----PFLTEKIKERIHMHGNNY 213 (262)
T ss_dssp EEEEECTTCCHHHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHG-----GGSCHHHHTTEEECCSSC
T ss_pred EEEEECCCCCHHHHhccCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHH-----HhcCHHHHhheEEeCCCc
Confidence 4455455655 23455666666666643 468999999888888887543 3888999999999865
Q ss_pred HHHHHHHHH
Q 033246 83 AKELVQKLE 91 (123)
Q Consensus 83 ~ee~l~~l~ 91 (123)
.+++.+++.
T Consensus 214 ~~~L~~~i~ 222 (262)
T 1r5l_A 214 KQSLLQHFP 222 (262)
T ss_dssp HHHHHHHST
T ss_pred HHHHHHHhh
Confidence 678888775
Done!