BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033256
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3H4F1|SP1L1_ARATH Protein SPIRAL1-like 1 OS=Arabidopsis thaliana GN=SP1L1 PE=2 SV=1
Length = 113
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 80/120 (66%), Gaps = 11/120 (9%)
Query: 1 MGRGVSSGGGQSSLGYLFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAP 60
MGRGVS GGGQSSLGYLFG+GEA KP P S+ P +A P+
Sbjct: 1 MGRGVSVGGGQSSLGYLFGSGEA--PKPAINNAPAPSSETLP---------ISADPSPKH 49
Query: 61 PAEPPAEVNKQIPAGVPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGG 120
A V KQIPAG+ ++ NNY RADGQN GNFLTDRP+TKVHAAPGGGSSLDYLFGG
Sbjct: 50 VAAQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGG 109
>sp|Q9LE54|SP1L2_ARATH Protein SPIRAL1-like 2 OS=Arabidopsis thaliana GN=SP1L2 PE=2 SV=1
Length = 110
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 85/124 (68%), Gaps = 21/124 (16%)
Query: 1 MGRGVSSGGGQSSLGYLFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAP 60
MGRGVS+GGGQSSLGYLFG+GEA PK V ++ E T + A AP
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGEA------PKLAAVNKTPAE-----------TESSAHAP 43
Query: 61 PAEPPA----EVNKQIPAGVPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDY 116
P + A + KQ+PAG+ N+ANNY RA+GQN GNF+TDRP+TKVH+APGGGSSLDY
Sbjct: 44 PTQAAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDY 103
Query: 117 LFGG 120
LFGG
Sbjct: 104 LFGG 107
>sp|Q9LF22|SP1L4_ARATH Protein SPIRAL1-like 4 OS=Arabidopsis thaliana GN=SP1L4 PE=2 SV=1
Length = 127
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 76/121 (62%), Gaps = 10/121 (8%)
Query: 3 RGVSSGGGQSSLGYLFGTGEA--SPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAP 60
RGV+SGGG+SSLGYLFG+GE+ P KP KT + GA P
Sbjct: 5 RGVNSGGGESSLGYLFGSGESVPKPNKPNAKTGFTTTTTTTTTTDGAG-----GRPKTTT 59
Query: 61 PAEPPAEVNK--QIPAGVPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLF 118
+ NK + AGV G+ NNY+R+DGQNCGNFLT+RP+TKVHAAPGGGSSL YLF
Sbjct: 60 TTTTTGDKNKTEENSAGVRGS-PNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLGYLF 118
Query: 119 G 119
G
Sbjct: 119 G 119
>sp|Q9SJW3|SPR1_ARATH Protein SPIRAL1 OS=Arabidopsis thaliana GN=SPR1 PE=2 SV=1
Length = 119
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 74/120 (61%), Gaps = 3/120 (2%)
Query: 1 MGRGVSSGGGQSSLGYLFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAP 60
MGRG S GGGQSSL YLFG +P S PA + AT A
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATT- 59
Query: 61 PAEPPAEVNKQIPAGVPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGG 120
+ PAE+NKQIPAG+ NNY RA+GQN GNFLTDRP+TKVHAAPGGGSSLDYLF G
Sbjct: 60 -SVEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117
>sp|Q2QQ99|SP1L3_ORYSJ Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica
GN=Os12g0502000 PE=2 SV=1
Length = 101
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 64/107 (59%), Gaps = 24/107 (22%)
Query: 16 YLFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAPPAEPPAEVNKQIPAG 75
YLFG GEA PK+ E P AP P AE K+IPAG
Sbjct: 16 YLFGGGEA------PKSAEKP------------------APVQKPAPSSSAEKLKEIPAG 51
Query: 76 VPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGGNE 122
+ + ANNY RA+GQNCGNFLTDRP+TKV AAPGGGSSLDYLF GN+
Sbjct: 52 IQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNK 98
>sp|Q9S7P8|SP1L3_ARATH Protein SPIRAL1-like 3 OS=Arabidopsis thaliana GN=SP1L3 PE=2 SV=1
Length = 122
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 73/118 (61%), Gaps = 9/118 (7%)
Query: 3 RGVSSGGGQSSLGYLFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAPPA 62
RGV++G +SSLGYLFG+G+ S A T + + + TT
Sbjct: 5 RGVNNGVNESSLGYLFGSGQPSSAAAATMGTTTTTTTTTTTDGTGGRPITTTTTTVTD-- 62
Query: 63 EPPAEVNKQIPAGVPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGG 120
NK+ AGV G+ NNYFR++GQNCGNFLTDRP+TKVHAAPGGGSSLDYLFGG
Sbjct: 63 ------NKKTSAGVRGS-PNNYFRSEGQNCGNFLTDRPSTKVHAAPGGGSSLDYLFGG 113
>sp|Q2R0W8|SP1L2_ORYSJ Protein SPIRAL1-like 2 OS=Oryza sativa subsp. japonica
GN=Os11g0629400 PE=2 SV=1
Length = 115
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 46/54 (85%)
Query: 67 EVNKQIPAGVPGNNANNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGG 120
E K+IPAG+ ANNYFRA GQNCGNFLTDRP+TKVHAAPGGGSSL YLFGG
Sbjct: 61 EKMKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGG 114
>sp|Q7Y1L9|SP1L1_ORYSJ Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica
GN=Os03g0417800 PE=2 SV=1
Length = 116
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 49/57 (85%), Gaps = 1/57 (1%)
Query: 66 AEVNKQIPAGVPGNNANN-YFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGGN 121
A+ KQIPAG+ G+ +NN Y RADGQN GNFLTDRP+TKVHAAPGGGSSL YLFGGN
Sbjct: 60 ADATKQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLGYLFGGN 116
>sp|Q8LGD1|SP1L5_ARATH Protein SPIRAL1-like 5 OS=Arabidopsis thaliana GN=SP1L5 PE=2 SV=1
Length = 99
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 82 NNYFRADGQNCGNFLTDRPTTKVHAAPGGGSSLDYLFG 119
NNY R GQN GNF+TDRPTTKV + PGGGSSL YLFG
Sbjct: 60 NNYQRVQGQNSGNFVTDRPTTKVKSVPGGGSSLGYLFG 97
>sp|Q7XQ83|SP1L4_ORYSJ Protein SPIRAL1-like 4 OS=Oryza sativa subsp. japonica
GN=Os04g0578300 PE=3 SV=1
Length = 127
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 14 LGYLFGTGEASPAKPTPK--------TTEVPRSQVEPANTGASQNATTAAPAAAPPAEPP 65
LGYLF E P P T + P+ + + AS A AAAP +
Sbjct: 17 LGYLF---EPEPEDIIPDHSTKSVQGTNKAPKGNIVLGDKMASDEADQEHQAAAPLKK-- 71
Query: 66 AEVNKQIPAGVPGNNANNYFRAD--GQNCGNFLTDRPTTKVHAAPGGGSSLDYLFGGNE 122
E + I V +A+N + + G N G +TDRP+T+V APGG SSL +LFG +
Sbjct: 72 -EDSNPI---VSSRSASNIYHTNQVGNNSGLLITDRPSTRVRCAPGGPSSLGFLFGDED 126
>sp|Q9Y4R8|TELO2_HUMAN Telomere length regulation protein TEL2 homolog OS=Homo sapiens
GN=TELO2 PE=1 SV=2
Length = 837
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 41 EPANTGASQNATTAAPAAA-PPAEPPAEVNKQIPAGVP 77
+PA GAS+ T+ PA A PPAE PAE+ + GVP
Sbjct: 444 QPAGDGASEAGTSLVPATAEPPAETPAEI---VDGGVP 478
>sp|Q9RDW6|PEPX_LACRH Xaa-Pro dipeptidyl-peptidase OS=Lactobacillus rhamnosus GN=pepX
PE=3 SV=1
Length = 797
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 16 YLFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAP--PAEPPAEVNKQIP 73
Y GT + + A P+T V+P GAS+ TAAPA+ P PA P KQ
Sbjct: 231 YFHGTNDVTAATHVPETVLA----VKPH--GASKAEVTAAPASKPKLPARPVTGETKQAA 284
Query: 74 AGVPGNN---ANNYFRADG 89
A N+ N+YF A G
Sbjct: 285 AYAEENSPYAFNDYFLARG 303
>sp|Q9Y2G4|ANKR6_HUMAN Ankyrin repeat domain-containing protein 6 OS=Homo sapiens
GN=ANKRD6 PE=1 SV=3
Length = 727
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 17 LFGTGEASPAKPTPKTTEVPRSQVEPANTGASQNATTAAPAAAPPAEPPA 66
L G A AK TP T E ++TG Q TA PAAA + PP
Sbjct: 517 LSGDSRACRAKSTPSTCE--------SSTGVDQLVVTAGPAAASDSSPPV 558
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.127 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,824,911
Number of Sequences: 539616
Number of extensions: 2570276
Number of successful extensions: 12498
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 10833
Number of HSP's gapped (non-prelim): 2011
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)