BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033259
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7F5|NTF2_ARATH Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=2
SV=1
Length = 126
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 115/123 (93%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
MDPD+V+KAFVEHYY+TFD NR GLA LYQE SMLTFEGQKIQG Q+IVAKLTSLPFQQC
Sbjct: 4 MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
+H I+TVDCQPSGPA GMLVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDIFRL
Sbjct: 64 KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 123
Query: 121 NYA 123
NYA
Sbjct: 124 NYA 126
>sp|Q9XJ54|NTF2_ORYSJ Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2
PE=2 SV=1
Length = 122
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
MD D+VAKAFVEHYY TFD NR L +LYQ+GSMLTFEGQ+ G+ I KL SLPF QC
Sbjct: 1 MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
H I TVDCQPSGP GGMLVFVSG+L+ ++H LKFSQMF L+P G+FYV ND+FRL
Sbjct: 61 HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDMFRL 119
Query: 121 NYA 123
NY
Sbjct: 120 NYG 122
>sp|Q75AA5|NTF2_ASHGO Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NTF2 PE=3 SV=1
Length = 125
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
MD ++A+ F E YY FD +R+ L NLY++ SMLTFE ++QG+++IV KL SLPFQ+
Sbjct: 3 MDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
QH ITT+D QP+ P G +LV ++G+L + EQ+A +FSQ+FHLMP S+YV NDIFRL
Sbjct: 63 QHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMPEG-NSYYVFNDIFRL 121
Query: 121 NYA 123
NY+
Sbjct: 122 NYS 124
>sp|Q6CQX4|NTF2_KLULA Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=NTF2 PE=3 SV=1
Length = 125
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
+D S+A+ F E YY FD++RT L NLY+E SMLTFE ++QG+++IV KL SLPFQ+
Sbjct: 3 VDFSSLAQQFTEFYYNQFDSDRTQLGNLYREQSMLTFETTQLQGAKDIVEKLVSLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
H ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHLMP S+YV NDIFRL
Sbjct: 63 AHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMPEG-SSYYVYNDIFRL 121
Query: 121 NYA 123
NY+
Sbjct: 122 NYS 124
>sp|Q6FRC6|NTF2_CANGA Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NTF2 PE=3
SV=1
Length = 125
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
MD +++A+ F E YY FD++R+ L NLY++ SMLTFE ++QG+++IV KL SLPFQ+
Sbjct: 3 MDFNALAQQFTEFYYNQFDSDRSQLGNLYRDESMLTFETSQLQGAKSIVEKLVSLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
H ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHL+P S+YV NDIFRL
Sbjct: 63 AHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIPDG-NSYYVFNDIFRL 121
Query: 121 NYA 123
NY+
Sbjct: 122 NYS 124
>sp|Q96VN3|NTF2_EMENI Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ntf2 PE=3
SV=1
Length = 125
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%)
Query: 2 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQ 61
D S+A+ FV YY TFD NR GLA LY++ SMLTFE IQG I+ KLTSLPFQ+ Q
Sbjct: 3 DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQ 62
Query: 62 HSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121
H ++T+D QPSG GG+LV V+G L + E++ + ++Q F LMP GS++VLND+FRL
Sbjct: 63 HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122
Query: 122 Y 122
Y
Sbjct: 123 Y 123
>sp|P33331|NTF2_YEAST Nuclear transport factor 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NTF2 PE=1 SV=2
Length = 125
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
+D +++A+ F + YY FD +R+ L NLY+ SMLTFE ++QG+++IV KL SLPFQ+
Sbjct: 3 LDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
QH ITT+D QP+ P G +LV ++G+L + EQ+ +FSQ+FHL+P S+YV NDIFRL
Sbjct: 63 QHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDG-NSYYVFNDIFRL 121
Query: 121 NYA 123
NY+
Sbjct: 122 NYS 124
>sp|Q6BWC0|NTF2_DEBHA Nuclear transport factor 2 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=NTF2 PE=3 SV=1
Length = 124
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
+D ++VA F YY FD++RT L NLY+E SMLTFE ++QG+++IV KL SLPFQ+
Sbjct: 3 VDFNTVASEFCNFYYQQFDSDRTQLGNLYREQSMLTFETSQLQGAKDIVEKLVSLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
H I+T+D QP P G +LV V+G L + EQ+A ++SQ+FHL+P S+YV NDIFRL
Sbjct: 63 AHRISTLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIPDG-NSYYVFNDIFRL 121
Query: 121 NYA 123
NY+
Sbjct: 122 NYS 124
>sp|Q10100|NTF2_SCHPO Nuclear transport factor 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ntf2 PE=3 SV=2
Length = 123
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 2 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQ 61
D +++A F + YY TFD++R+ L++LY+E SML+FEG ++QG++ IV KL SLPFQ+ Q
Sbjct: 3 DYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQ 62
Query: 62 HSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121
H I+T+D QP+G G ++V V+G L L EQ A ++SQ+FHL+ G++YVLND+FRLN
Sbjct: 63 HRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDLFRLN 121
Query: 122 Y 122
Y
Sbjct: 122 Y 122
>sp|Q9P926|NTF2_CANAX Nuclear transport factor 2 OS=Candida albicans GN=NTF2 PE=3 SV=1
Length = 124
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
+D ++VA F YY FD++R+ L NLY+ SMLTFE ++QG+++IV KL SLPFQ+
Sbjct: 3 VDFNAVATEFCNFYYNQFDSDRSQLGNLYRNESMLTFETSQLQGARDIVEKLASLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
H I+T+D QP+ G +LV V+G L + EQ+A ++SQ+FHL+P GS+YV NDIFRL
Sbjct: 63 AHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIP-DNGSYYVFNDIFRL 121
Query: 121 NYA 123
NY+
Sbjct: 122 NYS 124
>sp|Q8NJ52|NTF2_DAVTA Nuclear transport factor 2 OS=Davidiella tassiana GN=NTF2 PE=1 SV=1
Length = 125
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 2 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQ 61
D +++A+ F E YY TFD +R LA LY+E SMLTFE G+ NIV KL LPFQ+ +
Sbjct: 3 DFNAIAQQFTEFYYKTFDTDRAQLAPLYRENSMLTFEQSPFLGTANIVGKLQELPFQRIE 62
Query: 62 HSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121
H + TVD QPS +GG+LV VSG L + E+ + ++Q F L+P G++YV ND+FRL
Sbjct: 63 HQVATVDAQPSNESGGILVVVSGALLVEEERRPMSYTQTFQLLPA-DGAYYVFNDVFRLV 121
Query: 122 Y 122
Y
Sbjct: 122 Y 122
>sp|Q6CC82|NTF2_YARLI Nuclear transport factor 2 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=NTF2 PE=3 SV=1
Length = 123
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 3/122 (2%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
+D +++AK F E YY TFD +R+ L NLY++ SMLTF G + QG+Q IV KL LPF Q
Sbjct: 3 VDFNTLAKQFCEFYYQTFDTDRSQLGNLYRDHSMLTFTGTQHQGAQAIVEKLVGLPFGQV 62
Query: 61 QHSITTVDCQPSGPAGG-MLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFR 119
+H I+ +D QP+ GG ++V V+G L + G+ + L ++Q+FHL+P S+YV NDIFR
Sbjct: 63 RHKISDIDAQPASAQGGDVIVLVTGELCVDGD-NPLPYAQVFHLIPDG-SSYYVFNDIFR 120
Query: 120 LN 121
LN
Sbjct: 121 LN 122
>sp|P87102|NTF2_NEUCR Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ntf-2 PE=2 SV=1
Length = 124
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 78/120 (65%), Gaps = 1/120 (0%)
Query: 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60
+D ++A FV HYY+TFD++R LA LY++ SMLTFEG + G+Q I KLTSLPFQ+
Sbjct: 3 LDFTAIATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEKLTSLPFQKV 62
Query: 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
+H D QP+ GG+++ V+G L + EQ L +SQ F L G ++V NDIF+L
Sbjct: 63 KHEYGPPDAQPTA-TGGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIFKL 121
>sp|Q86HW7|NTF2_DICDI Nuclear transport factor 2 OS=Dictyostelium discoideum GN=nutf2
PE=1 SV=1
Length = 127
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 1 MDPD--SVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQ 58
+DP V K FVEHYY FD+NR GL +YQ+ + LT+EG+ + G+ IV + LPFQ
Sbjct: 4 VDPQVVGVGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTWEGKFLSGADAIVKHIVELPFQ 63
Query: 59 QCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGE-QHALKFSQMFHLMPTPQGSFYVLNDI 117
Q I ++DCQ + G+++ V+G L + GE ++ LKF Q+F+L + GSF ++ND
Sbjct: 64 QTNRKINSIDCQQTYQP-GIMITVTGTLIIDGEAKNQLKFVQVFNL-ASNNGSFLLINDF 121
Query: 118 FRL 120
FRL
Sbjct: 122 FRL 124
>sp|Q5R8G4|NTF2_PONAB Nuclear transport factor 2 OS=Pongo abelii GN=NUTF2 PE=2 SV=1
Length = 127
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
+ + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHS
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
IT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
>sp|P61972|NTF2_RAT Nuclear transport factor 2 OS=Rattus norvegicus GN=Nutf2 PE=1 SV=1
Length = 127
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
+ + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHS
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
IT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
>sp|P61971|NTF2_MOUSE Nuclear transport factor 2 OS=Mus musculus GN=Nutf2 PE=2 SV=1
Length = 127
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
+ + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHS
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
IT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
>sp|P61970|NTF2_HUMAN Nuclear transport factor 2 OS=Homo sapiens GN=NUTF2 PE=1 SV=1
Length = 127
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
+ + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHS
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
IT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
>sp|Q32KP9|NTF2_BOVIN Nuclear transport factor 2 OS=Bos taurus GN=NUTF2 PE=2 SV=1
Length = 127
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
+ + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHS
Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHS 67
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
IT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL
Sbjct: 68 ITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
>sp|Q21735|NTF2_CAEEL Probable nuclear transport factor 2 OS=Caenorhabditis elegans
GN=ran-4 PE=3 SV=1
Length = 133
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 8/126 (6%)
Query: 2 DPDSVAKAFVEHYYTTFD-----ANRTGLANLYQ-EGSMLTFEGQKIQGSQNIVAKLTSL 55
D +SVAKAF++HYY+ FD + GL++LY E S +TFEGQ+ +G I+ K T+L
Sbjct: 6 DYESVAKAFIQHYYSKFDVGDGMSRAQGLSDLYDPENSYMTFEGQQAKGRDGILQKFTTL 65
Query: 56 PFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLN 115
F + Q +IT +D QP G + V V G L+ E FSQ+F L P QGS+++ N
Sbjct: 66 GFTKIQRAITVIDSQPL-YDGSIQVMVLGQLK-TDEDPINPFSQVFILRPNNQGSYFIGN 123
Query: 116 DIFRLN 121
+IFRL+
Sbjct: 124 EIFRLD 129
>sp|O42242|NTF2_XENLA Nuclear transport factor 2 OS=Xenopus laevis GN=ntf2 PE=2 SV=1
Length = 127
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
+ + +F++ YY TFDA+RT LA +Y + S LT+EGQ+ G IV KL+ LPFQ+ QHS
Sbjct: 8 EQIGASFIQQYYQTFDADRTQLAVIYTDASCLTWEGQQYHGKAAIVEKLSLLPFQKIQHS 67
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
IT+ D QP+ P ++ V G L+ A + + F Q+F L+ Q ++ ND+FRL
Sbjct: 68 ITSQDHQPT-PDSCIISMVVGQLK-ADDDPIMGFHQVF-LLKNIQDAWVCTNDMFRL 121
>sp|O94260|G3BP_SCHPO Putative G3BP-like protein OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nxt3 PE=1 SV=1
Length = 434
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTF--EGQKI---QGSQNIVAKLTSLPFQ 58
D + FV+ YYT + L Y + S L EG+ I G Q I K+ L FQ
Sbjct: 16 DEIGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIHGDEGESISLCHGQQEIHNKILDLDFQ 75
Query: 59 QCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIF 118
C+ I+ VD S GG+++ V G + G + + KF+Q F L P G ++VLNDIF
Sbjct: 76 NCKVLISNVDSLASS-NGGIVIQVLGEMSNKG-KLSRKFAQTFFLAEQPNG-YFVLNDIF 132
Query: 119 RL 120
R
Sbjct: 133 RF 134
>sp|Q9UKK6|NXT1_HUMAN NTF2-related export protein 1 OS=Homo sapiens GN=NXT1 PE=1 SV=1
Length = 140
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YYTT D R L+ LY + L + G + G +++ LP + Q I+
Sbjct: 17 AEEFVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSEFQ--ISV 74
Query: 67 VDCQP----SGPA-GGMLVFVSGNLQLAGEQHALKFSQMFHLM--PTPQGSFY-VLNDIF 118
VDCQP + P+ +LV + G+++ G + F+Q F L +P + + + +D F
Sbjct: 75 VDCQPVHDEATPSQTTVLVVICGSVKFEGNKQR-DFNQNFILTAQASPSNTVWKIASDCF 133
Query: 119 RL 120
R
Sbjct: 134 RF 135
>sp|Q9QZV9|NXT1_MOUSE NTF2-related export protein 1 OS=Mus musculus GN=Nxt1 PE=1 SV=2
Length = 140
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YYTT D R L+ LY + L + G + G +++ LP + Q I+
Sbjct: 17 AEEFVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSEFQ--ISV 74
Query: 67 VDCQP----SGPA-GGMLVFVSGNLQLAGEQHALKFSQMFHLM--PTPQGSFY-VLNDIF 118
VDCQP + P+ +LV + G ++ G + F+Q F L +P + + + +D F
Sbjct: 75 VDCQPVHDDATPSQTTVLVVICGTVKFEGNKQR-DFNQNFILTAQASPSNTVWKIASDCF 133
Query: 119 RL 120
R
Sbjct: 134 RF 135
>sp|Q9U757|NXT1_CAEEL NTF2-related export protein OS=Caenorhabditis elegans GN=nxt-1 PE=1
SV=1
Length = 137
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
+K F++ YY D R + LY + S + G I G +I + +LP QH I +
Sbjct: 20 SKKFMDVYYDVMDRKREKIGFLYTQVSNAVWNGNPINGYDSICEFMKALP--STQHDIQS 77
Query: 67 VDCQ--PSGP----AGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFR 119
+D Q P G +GGML+ V+G + + G+ F+Q L+ G + V +D FR
Sbjct: 78 LDAQRLPEGVTGDMSGGMLLNVAGAVTVDGDSKRA-FTQTL-LLGVEDGKYKVKSDRFR 134
>sp|P0CAN8|NXT1_SCHPO NTF2-related export protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nxt1 PE=3 SV=1
Length = 115
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV+ YY++ D NR G+A Y+E S++ + G+ +Q ++ + + +LP+ + + +
Sbjct: 8 AQEFVQRYYSSLDTNRNGIAEFYRENSLILWNGKPMQVTE-FTSMIVNLPYSKTK--VED 64
Query: 67 VDCQPS-GPAGGMLVFVSGNLQLAGEQ 92
D Q G +++ VSG ++ G++
Sbjct: 65 FDSQQVMGNDMNIIIVVSGTIRFDGKK 91
>sp|Q2KIW0|NXT1_BOVIN NTF2-related export protein 1 OS=Bos taurus GN=NXT1 PE=2 SV=1
Length = 140
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YY+T D R L+ LY + L + G + G +++ LP + Q I
Sbjct: 17 AEEFVNVYYSTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSEFQ--INV 74
Query: 67 VDCQP----SGPA-GGMLVFVSGNLQLAGEQHALKFSQMFHLM--PTPQGSFY-VLNDIF 118
VDCQP + P+ +LV + G ++ G + F+Q F L +P + + + +D F
Sbjct: 75 VDCQPVHDEATPSQTTVLVVICGTVKFEGNKQR-DFNQNFILTAQASPSNTVWKIASDCF 133
Query: 119 RL 120
R
Sbjct: 134 RF 135
>sp|Q9NPJ8|NXT2_HUMAN NTF2-related export protein 2 OS=Homo sapiens GN=NXT2 PE=2 SV=1
Length = 142
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YY T D R L LY + + L + G + G + +LP + Q +
Sbjct: 18 AEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGLDALNNFFDTLPSSEFQ--VNM 75
Query: 67 VDCQP-----SGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMP--TPQGSFY-VLNDIF 118
+DCQP + +LV SG ++ G + F+Q F L TP + + + +D F
Sbjct: 76 LDCQPVHEQATQSQTTVLVVTSGTVKFDGNKQHF-FNQNFLLTAQSTPNNTVWKIASDCF 134
Query: 119 RL 120
R
Sbjct: 135 RF 136
>sp|Q9V3H8|NXT1_DROME NTF2-related export protein OS=Drosophila melanogaster GN=Nxt1 PE=2
SV=1
Length = 133
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A F YY + D R + LY + + L++ G G Q I + LP H + T
Sbjct: 16 ADTFTRLYYASVDNRRQQIGRLYLDNATLSWNGNGAIGRQMIESYFQELP--SSNHQLNT 73
Query: 67 VDCQPSGPAG-----GMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
+D QP L+ SG+++ A +Q KF Q F ++ + V++D +R+
Sbjct: 74 LDAQPIVDQAVSNQLAYLIMASGSVKFA-DQQLRKFQQTF-IVTAENDKWKVVSDCYRM 130
>sp|B2GV77|NXT2_RAT NTF2-related export protein 2 OS=Rattus norvegicus GN=Nxt2 PE=2
SV=1
Length = 142
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YY T D R L LY + + L + G + G + + LP + Q I
Sbjct: 18 AEEFVNIYYETMDKRRHALVRLYLDKATLIWNGNVVTGLEALANFFEMLPSSEFQ--INM 75
Query: 67 VDCQPSGPAG-----GMLVFVSGNLQLAGEQHALKFSQMFHLMP--TPQGSFY-VLNDIF 118
+DCQP +LV SG ++ G + F+Q F L TP + + + +D F
Sbjct: 76 LDCQPVHEQATQYQTTVLVVTSGVVKFDGNKQHF-FNQNFLLTAQSTPNSTVWKIASDCF 134
Query: 119 RL 120
R
Sbjct: 135 RF 136
>sp|Q3UNA4|NXT2_MOUSE NTF2-related export protein 2 OS=Mus musculus GN=Nxt2 PE=2 SV=1
Length = 142
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YY T D R L LY + + L + G + G + + LP + Q I
Sbjct: 18 AEEFVNIYYETMDKRRHALVRLYLDKATLIWNGNVVTGLEALANFFEMLPSSEFQ--INM 75
Query: 67 VDCQPSGPAG-----GMLVFVSGNLQLAGEQHALKFSQMFHLMP--TPQGSFY-VLNDIF 118
+DCQP +LV SG ++ G + F+Q F L TP + + + +D F
Sbjct: 76 LDCQPVHEQATQCQTTVLVVTSGVVKFDGNKQHF-FNQNFLLTAQSTPNSTVWKIASDCF 134
Query: 119 RL 120
R
Sbjct: 135 RF 136
>sp|A6QNX3|NXT2_BOVIN NTF2-related export protein 2 OS=Bos taurus GN=NXT2 PE=2 SV=1
Length = 142
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YY T D R L LY + + L + G + G + + LP + Q +
Sbjct: 18 AEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNVVTGLEALANFFDMLPSSEFQ--VNM 75
Query: 67 VDCQP-----SGPAGGMLVFVSGNLQLAG-EQHALKFSQMFHLMPTPQGS---FYVLNDI 117
+DCQP + +LV SG ++ G +QH F+Q F L + + + +D
Sbjct: 76 LDCQPVHEQATQSQTTVLVVTSGTVKFDGNKQH--YFNQNFLLTAQTTANNTVWKIASDC 133
Query: 118 FRL 120
FR
Sbjct: 134 FRF 136
>sp|Q5ZLH0|NXT2_CHICK NTF2-related export protein 2 OS=Gallus gallus GN=NXT2 PE=2 SV=1
Length = 141
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 7 AKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITT 66
A+ FV YY T D R L LY + + L + G + G + + LP + Q +
Sbjct: 18 AEEFVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGQEALNEFFEMLPSSEFQ--VNV 75
Query: 67 VDCQP-----SGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGS---FYVLNDIF 118
+DCQP + +LV G ++ G + F+Q F L + + + +D F
Sbjct: 76 LDCQPVHEQATQSQTTVLVVTCGTVKFDGNKQRY-FNQNFLLTAQATSNSTVWKIASDCF 134
Query: 119 RL 120
R
Sbjct: 135 RF 136
>sp|Q32LC7|G3BP1_BOVIN Ras GTPase-activating protein-binding protein 1 OS=Bos taurus
GN=G3BP PE=2 SV=1
Length = 465
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEG--------QKIQGSQNIVAKLTS 54
P V + FV YYT + L Y + S G + G + I K+ S
Sbjct: 8 PLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMS 67
Query: 55 LPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGS---- 110
F C I VD + G++V V G L Q +F Q F L P+GS
Sbjct: 68 QNFTNCHTKIRHVDAHAT-LNDGVVVQVMGLLS-NNNQALRRFMQTFVL--APEGSVANK 123
Query: 111 FYVLNDIFR 119
FYV NDIFR
Sbjct: 124 FYVHNDIFR 132
>sp|Q13283|G3BP1_HUMAN Ras GTPase-activating protein-binding protein 1 OS=Homo sapiens
GN=G3BP1 PE=1 SV=1
Length = 466
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEG--------QKIQGSQNIVAKLTS 54
P V + FV YYT + L Y + S G + G + I K+ S
Sbjct: 8 PLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMS 67
Query: 55 LPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGS---- 110
F C I VD + G++V V G L Q +F Q F L P+GS
Sbjct: 68 QNFTNCHTKIRHVDAHAT-LNDGVVVQVMGLLS-NNNQALRRFMQTFVL--APEGSVANK 123
Query: 111 FYVLNDIFR 119
FYV NDIFR
Sbjct: 124 FYVHNDIFR 132
>sp|Q5RB87|G3BP1_PONAB Ras GTPase-activating protein-binding protein 1 OS=Pongo abelii
GN=G3BP1 PE=2 SV=1
Length = 466
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEG--------QKIQGSQNIVAKLTS 54
P V + FV YYT + L Y + S G + G + I K+ S
Sbjct: 8 PLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMS 67
Query: 55 LPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGS---- 110
F C I VD + G++V V G L Q +F Q F L P+GS
Sbjct: 68 QNFTNCHTKIRHVDAHAT-LNDGVVVQVMGLLS-NNNQALRRFMQTFVL--APEGSVANK 123
Query: 111 FYVLNDIFR 119
FYV NDIFR
Sbjct: 124 FYVHNDIFR 132
>sp|P97855|G3BP1_MOUSE Ras GTPase-activating protein-binding protein 1 OS=Mus musculus
GN=G3bp1 PE=1 SV=1
Length = 465
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 52/129 (40%), Gaps = 16/129 (12%)
Query: 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEG--------QKIQGSQNIVAKLTS 54
P V + FV YYT + L Y + S G + G + I K+ S
Sbjct: 8 PLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMS 67
Query: 55 LPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGS---- 110
F C I VD + G++V V G L Q +F Q F L P+GS
Sbjct: 68 QNFTNCHTKIRHVDAHAT-LNDGVVVQVMGLLS-NNNQALRRFMQTFVL--APEGSVANK 123
Query: 111 FYVLNDIFR 119
FYV NDIFR
Sbjct: 124 FYVHNDIFR 132
>sp|P63977|DPO3A_MYCTU DNA polymerase III subunit alpha OS=Mycobacterium tuberculosis
GN=dnaE1 PE=3 SV=1
Length = 1184
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
D V+ + + T N TGL NL++ S +FEGQ + S+ + A+L + + +
Sbjct: 97 DDVSGSGSYTHLTMMAENATGLRNLFKLSSHASFEGQLSKWSR-MDAELIA---EHAEGI 152
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLND 116
I T C PSG V L+L ++ AL+ + + + P F L D
Sbjct: 153 IITTGC-PSGE-------VQTRLRLGQDREALEAAAKWREIVGPDNYFLELMD 197
>sp|P63978|DPO3A_MYCBO DNA polymerase III subunit alpha OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=dnaE PE=3 SV=1
Length = 1184
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
D V+ + + T N TGL NL++ S +FEGQ + S+ + A+L + + +
Sbjct: 97 DDVSGSGSYTHLTMMAENATGLRNLFKLSSHASFEGQLSKWSR-MDAELIA---EHAEGI 152
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLND 116
I T C PSG V L+L ++ AL+ + + + P F L D
Sbjct: 153 IITTGC-PSGE-------VQTRLRLGQDREALEAAAKWREIVGPDNYFLELMD 197
>sp|Q62504|MINT_MOUSE Msx2-interacting protein OS=Mus musculus GN=Spen PE=1 SV=2
Length = 3644
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 15/56 (26%)
Query: 34 MLTFEGQKIQGSQNIVAKLTSLP--------FQQC-------QHSITTVDCQPSGP 74
+L++ GQK +G Q I AK++ +P FQQ SIT P GP
Sbjct: 2791 LLSYSGQKTEGPQRISAKISQIPPASAMDIEFQQSVSKSQVKADSITPTQSAPKGP 2846
>sp|Q9R283|TRPC2_RAT Short transient receptor potential channel 2 OS=Rattus norvegicus
GN=Trpc2 PE=2 SV=2
Length = 1170
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 81 FVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120
F L L+ + L F+++P+P+ +FY+L IFR
Sbjct: 936 FARSKLYLSYFREGLTLPVPFNILPSPKAAFYLLRRIFRF 975
>sp|A4SVA7|SYP_POLSQ Proline--tRNA ligase OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=proS PE=3 SV=1
Length = 580
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 49 VAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQL 88
VAKL +LP +Q S+ Q SGPA ++ V G+ +L
Sbjct: 266 VAKLLNLPLEQTVKSLLFAADQESGPAKLFMLLVRGDHEL 305
>sp|O45657|PLX2_CAEEL Plexin-2 OS=Caenorhabditis elegans GN=plx-2 PE=1 SV=4
Length = 1766
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 13/90 (14%)
Query: 35 LTFEGQKIQGSQNIVAKL----TSL--PFQ-QCQHSITTVDCQPSGPAGGMLVFVSGNLQ 87
LT G +I S +V + T L PF+ + SI+++ S AGG +V+V GN
Sbjct: 894 LTPSGTRIGKSARVVVHVDHSQTQLDQPFEYRSDPSISSIFPMTSFKAGGRIVYVQGN-- 951
Query: 88 LAGEQHALKFSQMFHLMPTPQGSFYVLNDI 117
+ ++ +++F L+ +P FY+++D+
Sbjct: 952 ---SLNTVQTAKLF-LISSPTPPFYIISDL 977
>sp|Q4A3R3|DMBT1_PIG Deleted in malignant brain tumors 1 protein OS=Sus scrofa GN=DMBT1
PE=2 SV=1
Length = 1204
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 53 TSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNL 86
T+ P Q H TT PS P GG L SG
Sbjct: 495 TTTPSQTWWHPTTTTAASPSSPCGGFLTSASGTF 528
>sp|Q9X7F0|DPO3A_MYCLE DNA polymerase III subunit alpha OS=Mycobacterium leprae (strain
TN) GN=dnaE PE=3 SV=1
Length = 1177
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 4 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 63
D V+ + T N GL NL++ S+ +FEGQ + S+ + A+L + +
Sbjct: 93 DDVSAGGAYTHLTMVAENAAGLRNLFKLSSLASFEGQLSKWSR-MDAELIG---EYAEGI 148
Query: 64 ITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLND 116
I T C PSG V L+L ++ AL+ + + + P F L D
Sbjct: 149 IVTTGC-PSGE-------VQTRLRLGHDREALESAAKWREIVGPDNYFLELMD 193
>sp|Q9Z7Y1|Y572_CHLPN Uncharacterized protein CPn_0572/CP_0177/CPj0572/CpB0594
OS=Chlamydia pneumoniae GN=CPn_0572 PE=3 SV=1
Length = 755
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 12 EHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQP 71
+H T +D+N +++L Q+ GQ ++ S+N V F TT D P
Sbjct: 485 QHLNTAYDSNGNSVSDLNQD------LGQVVKNSENGVN------FPTVILPKTTGDTDP 532
Query: 72 SGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQ 108
SG A G + G+++ +++ Q PTPQ
Sbjct: 533 SGQATGGVTEGGGHIRNIIQRNTQSTGQSEGATPTPQ 569
>sp|P34057|RECO_MOUSE Recoverin OS=Mus musculus GN=Rcvrn PE=2 SV=2
Length = 202
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 3 PDSVAKAFVEHYYTTFDANRTG 24
PDS KA+ +H + +FDAN G
Sbjct: 58 PDSDPKAYAQHVFRSFDANSDG 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,176,318
Number of Sequences: 539616
Number of extensions: 1599440
Number of successful extensions: 3252
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3200
Number of HSP's gapped (non-prelim): 49
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)