Query 033259
Match_columns 123
No_of_seqs 111 out of 751
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 19:31:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gy7_A Nuclear transport facto 100.0 7.4E-45 2.5E-49 245.1 14.9 122 1-123 3-124 (125)
2 1zo2_A NTF2, nuclear transport 100.0 5E-44 1.7E-48 242.2 14.8 121 1-123 9-129 (129)
3 1gy6_A Nuclear transport facto 100.0 2.1E-43 7.2E-48 238.6 13.9 119 2-123 6-124 (127)
4 3ujm_A Rasputin; NTF2-like fol 100.0 8E-43 2.7E-47 233.7 12.4 118 2-121 2-120 (120)
5 3q90_A RAS GTPase-activating p 100.0 3.6E-42 1.2E-46 236.0 13.2 120 1-122 7-136 (140)
6 3nv0_B NTF2-related export pro 100.0 6.8E-41 2.3E-45 232.8 14.7 116 3-122 33-154 (154)
7 2qiy_A UBP3-associated protein 100.0 4E-41 1.4E-45 234.0 13.5 120 1-122 9-148 (154)
8 1jkg_A P15; NTF2-like domain, 100.0 2.8E-39 9.6E-44 221.5 14.6 117 3-122 13-137 (140)
9 1q40_B MEX67, mRNA export fact 100.0 7.5E-31 2.6E-35 191.0 13.0 117 3-121 13-207 (219)
10 1jkg_B TAP; NTF2-like domain, 100.0 2.1E-30 7E-35 192.3 14.8 116 3-121 14-168 (250)
11 1of5_A MRNA export factor MEX6 100.0 3.9E-31 1.3E-35 192.7 10.6 117 2-121 9-201 (221)
12 3nv0_A Nuclear RNA export fact 99.9 2.7E-25 9.4E-30 160.4 13.9 115 3-120 12-182 (205)
13 1q42_A MTR2, mRNA transport re 99.9 3.1E-23 1.1E-27 146.2 7.5 102 2-106 24-146 (201)
14 1of5_B MTR2, YKL186C, mRNA tra 99.8 4.9E-19 1.7E-23 123.6 10.4 100 4-106 16-121 (184)
15 4i4k_A Uncharacterized protein 98.5 2.3E-06 7.8E-11 57.4 11.2 112 5-118 19-137 (143)
16 3hx8_A MLR2180 protein, putati 98.3 3.5E-05 1.2E-09 49.3 12.0 115 2-120 3-125 (129)
17 3cu3_A Domain of unknown funct 98.2 1.4E-05 4.7E-10 54.7 9.7 113 5-119 16-136 (172)
18 2gxf_A Hypothetical protein YY 98.2 2.7E-05 9.2E-10 51.5 10.8 110 6-117 4-120 (142)
19 3d9r_A Ketosteroid isomerase-l 98.2 6.5E-05 2.2E-09 48.4 12.1 114 5-121 11-133 (135)
20 3gzr_A Uncharacterized protein 98.1 9.4E-05 3.2E-09 49.7 11.4 115 5-121 6-130 (146)
21 3rob_A Uncharacterized conserv 98.0 0.00022 7.6E-09 47.6 12.7 114 4-118 16-134 (139)
22 3h51_A Putative calcium/calmod 97.9 0.00032 1.1E-08 47.0 12.3 112 4-121 19-140 (156)
23 3b7c_A Uncharacterized protein 97.9 0.00082 2.8E-08 43.2 13.5 110 4-118 4-120 (122)
24 3bb9_A Putative orphan protein 97.8 0.00027 9.2E-09 47.0 9.9 111 4-117 29-146 (148)
25 2r4i_A Uncharacterized protein 97.7 0.0012 4.1E-08 41.7 11.8 116 1-119 2-120 (123)
26 3f7s_A Uncharacterized NTF2-li 97.7 0.0013 4.4E-08 43.0 12.1 113 3-119 6-126 (142)
27 3gwr_A Putative calcium/calmod 97.7 0.00093 3.2E-08 44.7 10.8 110 7-119 10-126 (144)
28 3duk_A NTF2-like protein of un 97.6 0.0017 5.7E-08 42.4 11.5 105 6-120 13-123 (125)
29 2ux0_A Calcium-calmodulin depe 97.6 0.0016 5.5E-08 42.6 11.3 112 5-119 13-135 (143)
30 2rfr_A Uncharacterized protein 97.6 0.0014 4.7E-08 43.4 10.7 113 5-121 19-142 (155)
31 2chc_A Protein RV3472; hypothe 97.5 0.0043 1.5E-07 41.8 12.5 114 5-121 14-132 (170)
32 3b8l_A Uncharacterized protein 97.3 0.0027 9.1E-08 42.6 9.9 115 5-121 28-152 (163)
33 3a76_A Gamma-hexachlorocyclohe 97.2 0.0062 2.1E-07 41.6 10.7 115 5-121 31-154 (176)
34 2rcd_A Uncharacterized protein 97.1 0.022 7.4E-07 36.7 13.0 105 8-119 17-125 (129)
35 3soy_A NTF2-like superfamily p 97.1 0.023 7.8E-07 37.7 12.1 111 7-118 12-133 (145)
36 3dm8_A Uncharacterized protein 96.9 0.016 5.6E-07 38.0 10.3 94 7-104 6-112 (143)
37 3cnx_A Uncharacterized protein 96.9 0.051 1.7E-06 37.5 13.6 111 7-120 14-155 (170)
38 3er7_A Uncharacterized NTF2-li 96.9 0.0012 4.2E-08 43.7 4.5 59 9-67 6-72 (131)
39 1ohp_A Steroid delta-isomerase 96.8 0.0091 3.1E-07 37.1 8.0 53 4-56 4-59 (125)
40 3h3h_A Uncharacterized snoal-l 96.7 0.003 1E-07 40.3 5.0 63 1-66 5-81 (122)
41 3f7x_A Putative polyketide cyc 96.5 0.02 6.9E-07 38.0 8.4 50 7-56 22-73 (151)
42 3mg1_A OCP, orange carotenoid 96.5 0.017 5.9E-07 43.5 8.7 108 6-116 193-304 (323)
43 4h3u_A Hypothetical protein; s 96.5 0.065 2.2E-06 35.5 11.0 47 9-55 29-78 (158)
44 3fsd_A NTF2-like protein of un 96.4 0.088 3E-06 33.9 11.7 110 8-121 17-133 (134)
45 3jum_A Phenazine biosynthesis 96.4 0.02 6.9E-07 40.1 8.0 80 6-88 42-130 (185)
46 3fka_A Uncharacterized NTF-2 l 96.4 0.033 1.1E-06 35.8 8.6 102 7-120 11-119 (120)
47 1oh0_A Steroid delta-isomerase 96.3 0.017 6E-07 36.5 6.8 52 4-55 6-60 (131)
48 3ef8_A Putative scyalone dehyd 96.3 0.12 4.1E-06 34.0 11.2 111 6-120 12-132 (150)
49 3blz_A NTF2-like protein of un 96.2 0.12 4.1E-06 33.1 12.0 107 5-121 12-125 (128)
50 2bng_A MB2760; epoxide hydrola 96.2 0.11 3.8E-06 33.8 10.6 51 6-56 16-68 (149)
51 1tp6_A Hypothetical protein PA 96.0 0.15 5.3E-06 32.9 11.4 108 7-117 12-125 (128)
52 2f86_B Hypothetical protein K1 96.0 0.086 2.9E-06 35.0 9.3 111 7-119 14-131 (143)
53 2rgq_A Domain of unknown funct 95.9 0.18 6.1E-06 32.8 12.2 109 5-119 10-126 (144)
54 1nww_A Limonene-1,2-epoxide hy 95.9 0.18 6E-06 32.6 12.7 50 7-56 24-75 (149)
55 2owp_A Hypothetical protein BX 95.9 0.18 6.2E-06 32.8 12.9 108 8-120 14-125 (129)
56 3en8_A Uncharacterized NTF-2 l 95.9 0.02 7E-07 37.1 5.7 55 1-56 2-59 (128)
57 3i0y_A Putative polyketide cyc 95.8 0.17 5.7E-06 32.3 10.1 50 7-56 10-61 (140)
58 3dmc_A NTF2-like protein; stru 95.8 0.085 2.9E-06 34.3 8.7 53 4-56 11-68 (134)
59 3ke7_A Putative ketosteroid is 95.8 0.14 4.7E-06 33.8 9.7 100 16-120 25-129 (134)
60 1z1s_A Hypothetical protein PA 95.6 0.26 8.9E-06 32.7 10.6 50 7-56 25-81 (163)
61 3fgy_A Uncharacterized NTF2-li 95.5 0.02 6.8E-07 36.6 4.6 55 1-56 2-62 (135)
62 3f14_A Uncharacterized NTF2-li 95.5 0.032 1.1E-06 35.0 5.4 90 9-104 4-100 (112)
63 1s5a_A Hypothetical protein YE 95.5 0.23 8E-06 31.9 9.8 51 6-56 11-68 (150)
64 3ec9_A Uncharacterized NTF2-li 95.4 0.053 1.8E-06 34.9 6.4 49 7-55 14-69 (140)
65 3fh1_A Uncharacterized NTF2-li 95.3 0.039 1.3E-06 35.3 5.5 59 6-66 18-85 (129)
66 3mso_A Steroid delta-isomerase 95.2 0.012 4E-07 39.1 2.8 54 2-55 6-62 (143)
67 3gzb_A Putative snoal-like pol 95.1 0.048 1.6E-06 36.4 5.4 50 7-56 22-74 (154)
68 3dxo_A Uncharacterized snoal-l 95.1 0.028 9.7E-07 35.9 4.2 62 8-71 6-77 (121)
69 3g8z_A Protein of unknown func 94.7 0.14 4.8E-06 33.6 7.1 49 7-55 22-76 (148)
70 2k54_A Protein ATU0742; protei 94.7 0.29 1E-05 30.6 8.3 49 7-55 5-56 (123)
71 2gex_A SNOL; alpha+beta barrel 94.6 0.25 8.6E-06 32.2 8.1 63 1-66 1-68 (152)
72 3rga_A Epoxide hydrolase; NTF2 94.4 0.27 9.3E-06 36.1 8.7 55 1-55 2-59 (283)
73 3ff2_A Uncharacterized cystati 94.4 0.06 2E-06 33.7 4.5 60 1-66 2-68 (117)
74 3ff0_A Phenazine biosynthesis 94.2 0.35 1.2E-05 33.1 8.3 98 6-103 20-128 (163)
75 2gey_A ACLR protein; alpha+bet 94.0 0.3 1E-05 32.1 7.5 62 1-66 1-67 (158)
76 1tuh_A BAL32A, hypothetical pr 93.9 0.39 1.3E-05 31.4 7.9 51 5-55 29-85 (156)
77 3f40_A Uncharacterized NTF2-li 93.8 0.061 2.1E-06 34.1 3.6 56 1-56 2-58 (114)
78 2a15_A Hypothetical protein RV 93.8 0.76 2.6E-05 29.1 10.4 52 5-56 7-68 (139)
79 3f9s_A Putative polyketide cyc 93.8 0.073 2.5E-06 34.5 4.0 65 1-67 2-77 (146)
80 3rga_A Epoxide hydrolase; NTF2 93.7 0.76 2.6E-05 33.7 9.8 53 4-56 137-192 (283)
81 3ejv_A Uncharacterized protein 93.1 1.1 3.7E-05 30.5 9.4 70 3-72 24-108 (179)
82 3grd_A Uncharacterized NTF2-su 93.0 0.47 1.6E-05 29.9 6.9 49 7-55 6-61 (134)
83 3ebt_A Uncharacterized NTF2-li 92.8 1.1 3.7E-05 28.0 11.4 49 8-56 6-63 (132)
84 3k0z_A Putative polyketide cyc 92.6 0.75 2.6E-05 30.4 7.7 58 7-66 36-99 (159)
85 3ehc_A Snoal-like polyketide c 92.5 0.67 2.3E-05 29.1 7.2 54 8-66 6-64 (128)
86 3hk4_A MLR7391 protein; NTF2-l 92.5 1.4 4.9E-05 28.7 9.2 49 8-56 23-77 (136)
87 3kkg_A Putative snoal-like pol 92.0 0.56 1.9E-05 30.2 6.4 58 7-66 11-77 (146)
88 3f8h_A Putative polyketide cyc 91.8 1 3.6E-05 29.4 7.7 47 9-55 22-70 (150)
89 3g16_A Uncharacterized protein 89.6 0.48 1.6E-05 32.1 4.4 52 5-56 10-66 (156)
90 3f8x_A Putative delta-5-3-keto 89.3 0.31 1.1E-05 32.5 3.3 52 4-55 19-73 (148)
91 1sjw_A Nogalonic acid methyl e 88.1 2.8 9.5E-05 26.5 7.2 49 7-55 4-55 (144)
92 2f99_A Aklanonic acid methyl e 87.3 0.16 5.4E-06 33.4 0.8 50 6-55 12-64 (153)
93 3lyg_A NTF2-like protein of un 83.8 3.3 0.00011 26.8 5.6 48 10-57 7-61 (120)
94 3g0k_A Putative membrane prote 82.5 7.9 0.00027 25.1 10.5 60 4-66 26-91 (148)
95 3flj_A Uncharacterized protein 77.9 2.2 7.5E-05 28.7 3.5 47 8-54 21-70 (155)
96 2imj_A Hypothetical protein DU 75.6 4.4 0.00015 27.5 4.4 44 11-54 23-67 (166)
97 2b1x_B Naphthalene dioxygenase 73.4 17 0.00058 24.0 12.9 115 4-120 12-158 (172)
98 3eby_A Beta subunit of A putat 64.0 28 0.00095 22.8 11.3 113 5-119 14-149 (163)
99 3e99_A Benzoate 1,2-dioxygenas 59.3 36 0.0012 22.6 12.1 111 7-119 10-149 (164)
100 1pfs_A PF3 SSDBP, PF3 single-s 53.4 31 0.001 20.3 4.5 30 77-106 2-33 (78)
101 2ia7_A Tail lysozyme, putative 47.8 43 0.0015 21.2 5.2 52 46-103 77-130 (134)
102 4giw_A RUN and SH3 domain-cont 47.6 7.7 0.00026 26.9 1.5 51 8-58 130-184 (198)
103 1uli_B Biphenyl dioxygenase sm 38.6 87 0.003 21.0 13.7 114 5-119 24-172 (187)
104 2gbw_B Biphenyl 2,3-dioxygenas 38.3 83 0.0028 20.6 13.6 68 5-72 14-111 (174)
105 4gb5_A Uncharacterized protein 37.3 70 0.0024 20.2 5.0 66 7-72 13-87 (159)
106 3ub1_A ORF13-like protein; NTF 29.1 1.6E+02 0.0055 21.2 10.2 30 5-34 155-185 (261)
107 3gzx_B Biphenyl dioxygenase su 28.3 1.4E+02 0.0047 20.1 12.8 115 5-120 23-172 (186)
108 2dwk_A Protein RUFY3; RUN doma 27.8 24 0.00081 24.0 1.4 41 11-56 119-159 (180)
109 4fbo_A Pseudomonas fluorescens 23.4 1.5E+02 0.005 19.1 4.4 31 81-116 46-76 (133)
110 3j20_S 30S ribosomal protein S 22.9 36 0.0012 19.6 1.3 18 4-21 10-27 (67)
111 4ba6_A Endoglucanase CEL5A; ca 20.5 1.7E+02 0.0059 18.5 5.1 50 37-90 83-133 (144)
112 2izy_A CAMP-dependent protein 20.3 34 0.0011 18.7 0.8 18 9-26 31-48 (54)
No 1
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=100.00 E-value=7.4e-45 Score=245.11 Aligned_cols=122 Identities=52% Similarity=0.944 Sum_probs=115.2
Q ss_pred CChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEE
Q 033259 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLV 80 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI 80 (123)
||+++||+.||++||++||++|+.|++||+++|+++|+|+.+.|+++|.++|.+||+++++|+|+++||||+..++||+|
T Consensus 3 m~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~~s~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~D~qp~~~~~gili 82 (125)
T 1gy7_A 3 LDFNTLAQNFTQFYYNQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPYGDVLV 82 (125)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSCCSCEEEEEEEEEEEESSTTSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHhhCCCcEEEECCcEecCHHHHHHHHHhCCCcceEEEEEEEEEEEecCCCeEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999844589999
Q ss_pred EEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEeecC
Q 033259 81 FVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 123 (123)
Q Consensus 81 ~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~~~ 123 (123)
+|+|.++.++++++|+|+|||+|+|.+ ++|+|.||+|||+++
T Consensus 83 ~V~G~~~~~~~~~~~~F~qtF~L~p~~-~~~~I~nD~fr~~~~ 124 (125)
T 1gy7_A 83 MITGDLLIDEEQNPQRFSQVFHLIPDG-NSYYVFNDIFRLNYS 124 (125)
T ss_dssp EEEEEEEETTCSSCEEEEEEEEEEEET-TEEEEEEEEEEEECC
T ss_pred EEEEEEEECCCCCCccEeEEEEEEEeC-CEEEEEEEEEEEecC
Confidence 999999998873499999999999998 799999999999974
No 2
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=100.00 E-value=5e-44 Score=242.23 Aligned_cols=121 Identities=51% Similarity=0.892 Sum_probs=114.0
Q ss_pred CChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEE
Q 033259 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLV 80 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI 80 (123)
++++++|++||++||++||++|+.|++||+++|+|+|+|+.+.|+++|.++|++||+.+++|+|+++||||+ .+++|+|
T Consensus 9 p~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~D~qp~-~~~gilI 87 (129)
T 1zo2_A 9 PQFDQIGKQFVQHYYQTFQTNRPALGGLYGPQSMLTWEDTQFQGQANIVNKFNSLNFQRVQFEITRVDCQPS-PNNGSIV 87 (129)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHHCCSCEEEEEEEEEEEEC-TBSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEECCceeccHHHHHHHHHhCCCcceEEEEEEEEEEEe-CCCcEEE
Confidence 357999999999999999999999999999999999999999999999999999998889999999999999 7789999
Q ss_pred EEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEeecC
Q 033259 81 FVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 123 (123)
Q Consensus 81 ~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~~~ 123 (123)
+|+|.++.++++ +|+|+|||+|+|.++++|+|.||+|||+++
T Consensus 88 ~V~G~~~~~~~~-~~~F~qtF~L~p~~~~~y~I~nD~fR~~~~ 129 (129)
T 1zo2_A 88 FVTGDVRIDDGQ-PLKFSQVFNLMPSGNGGFMIFNDLFRLNLG 129 (129)
T ss_dssp EEEEEEEETTCC-CEEEEEEEEEEECSSSCEEEEEEEEEEC--
T ss_pred EEEEEEEECCCC-cceEEEEEEEEEcCCCcEEEEeEEEEEecC
Confidence 999999998876 999999999999876899999999999974
No 3
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=100.00 E-value=2.1e-43 Score=238.58 Aligned_cols=119 Identities=41% Similarity=0.698 Sum_probs=114.2
Q ss_pred ChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEEE
Q 033259 2 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVF 81 (123)
Q Consensus 2 ~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI~ 81 (123)
+++++|++||++||++||++|+.|++||+++|+++|+|+.+.|+++|.++|++||+.+++|+|+++||||+ .+++|+|+
T Consensus 6 ~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp~~~~~h~i~t~d~qp~-~~~~ili~ 84 (127)
T 1gy6_A 6 IWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCIISM 84 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHCSCSCEEEEEEEEEEEEC-TTSCEEEE
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEECCccccCHHHHHHHHHhCCCcceEEEEEEEEEEEe-CCCcEEEE
Confidence 48999999999999999999999999999999999999999999999999999999889999999999999 78999999
Q ss_pred EEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEeecC
Q 033259 82 VSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA 123 (123)
Q Consensus 82 V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~~~ 123 (123)
|+|.++.++++ +|+|+|||+|+|.+ ++|+|.||+|||+++
T Consensus 85 V~G~~~~~~~~-~~~F~qtF~L~p~~-~~~~I~nD~fr~~~~ 124 (127)
T 1gy6_A 85 VVGQLKADEDP-IMGFHQMFLLKNIN-DAWVCTNDMFRLALH 124 (127)
T ss_dssp EEEEEEETTSC-CEEEEEEEEEEEET-TEEEEEEEEEEECCC
T ss_pred EEEEEEECCCC-cceEeEEEEEEEeC-CEEEEEEEEEEEEcc
Confidence 99999998876 99999999999998 999999999999873
No 4
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=100.00 E-value=8e-43 Score=233.70 Aligned_cols=118 Identities=31% Similarity=0.561 Sum_probs=109.9
Q ss_pred ChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEc-CcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEE
Q 033259 2 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFE-GQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLV 80 (123)
Q Consensus 2 ~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~-g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI 80 (123)
+|++||+.||++||++||++|+.|++||.++|.++|+ |+.+.|+++|.++|++||+.+++|+|.++||||+ .++||+|
T Consensus 2 s~~~vg~~Fv~~YY~~ld~~r~~L~~~Y~~~s~~~~~~~~~~~G~~~I~~~l~~Lpf~~~~~~I~t~D~Qp~-~~~gili 80 (120)
T 3ujm_A 2 SHMSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYIHGESKLVVGQREIHNRIQQLNFNDCHAKISQVDAQAT-LGNGVVV 80 (120)
T ss_dssp --CCHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTCCCEESHHHHHHHHHHHCCCSCEEEEEEEEEEEE-GGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHhhhecccceEEEcCCcEecCHHHHHHHHHcCCCcceEEEEecccceEc-CCCCEEE
Confidence 6889999999999999999999999999999988775 8999999999999999999999999999999999 7789999
Q ss_pred EEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 81 FVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 81 ~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
+|+|.++.++++ +|+|+|||+|+|.++++|+|.||||||.
T Consensus 81 ~V~G~l~~~~~~-~r~F~QtF~L~p~~~~~y~V~nDifR~q 120 (120)
T 3ujm_A 81 QVTGELSNDGQP-MRRFTQTFVLAAQSPKKYYVHNDIFRYQ 120 (120)
T ss_dssp EEEEEEESTTCC-CEEEEEEEEEEECSTTCEEEEEEEEEEC
T ss_pred EEEEEEEeCCCC-CceEEEEEEEEEcCCCCEEEEEEEEecC
Confidence 999999998876 8999999999998668999999999983
No 5
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=100.00 E-value=3.6e-42 Score=235.98 Aligned_cols=120 Identities=32% Similarity=0.516 Sum_probs=109.6
Q ss_pred CChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEE-----cCc---ccccHHHHHHHHhcCCCceeeEEeeEeeeeee
Q 033259 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTF-----EGQ---KIQGSQNIVAKLTSLPFQQCQHSITTVDCQPS 72 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~-----~g~---~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~ 72 (123)
+++++||+.||++||++||++|+.|++||+++|+++| ||+ .+.|+++|.++|++||+.+++|+|.++||||+
T Consensus 7 p~~~~vg~~Fv~~YY~~ld~~r~~L~~~Y~~~S~l~~~~~~~ng~~~~~~~G~~~I~~~l~~Lp~~~~~~~I~tvD~Qps 86 (140)
T 3q90_A 7 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHAT 86 (140)
T ss_dssp -CHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEC----------CCCEEHHHHHHHHHHHTCCCSCEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHhhcccCceEEEEccCCCCceeecccCHHHHHHHHHhCCCccceEEEEeEEEEEe
Confidence 4689999999999999999999999999999999999 454 78999999999999999889999999999999
Q ss_pred CCCCcEEEEEEEEEEECCCCcceeeEEEEEeeeCC--CCcEEEEceeEEeec
Q 033259 73 GPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTP--QGSFYVLNDIFRLNY 122 (123)
Q Consensus 73 ~~~~~ilI~V~G~~~~~~~~~~~~F~qtFvL~~~~--~~~y~I~nD~fr~~~ 122 (123)
.++||+|+|+|+++.++++ +|+|+|||+|+|.+ +++|+|.||||||++
T Consensus 87 -~~~gilI~V~G~l~~~~~~-~~~F~QtF~L~p~~~~~~~y~V~nDifR~~d 136 (140)
T 3q90_A 87 -LNDGVVVQVMGLLSNNNQA-LRRFMQTFVLAPEGSVANKFYVHNDIFRYQD 136 (140)
T ss_dssp -GGGCEEEEEEEEEECTTCC-CEEEEEEEEEEECSSSTTCEEEEEEEEEEGG
T ss_pred -CCCCEEEEEEEEEecCCCC-ccEEEEEEEEeecCCCCCCEEEEEEEeEeeh
Confidence 7789999999999998876 89999999999986 489999999999987
No 6
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=100.00 E-value=6.8e-41 Score=232.76 Aligned_cols=116 Identities=30% Similarity=0.491 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCC------CC
Q 033259 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGP------AG 76 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~------~~ 76 (123)
+.+||++||++||++||++|+.|++||+++|+|+|+|+.+.|+++|.++|++|| .++|+|.++||||++. ++
T Consensus 33 a~~vg~~FV~qYY~~~d~~R~~L~~fY~d~S~ls~~g~~~~G~~~I~~~l~~Lp--~~~h~I~s~D~qp~~~~~~~q~~~ 110 (154)
T 3nv0_B 33 LCNESKKFMDVYYDVMDRKREKIGFLYTQVSNAVWNGNPINGYDSICEFMKALP--STQHDIQSLDAQRLPEGVTGDMSG 110 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSC--CEEEEEEEEEEEECCTTCCGGGTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHhcCCcEEEECCeecccHHHHHHHHHhCC--CeEEEEEEEEEEEcCccccCCCCC
Confidence 568999999999999999999999999999999999999999999999999999 6999999999999942 67
Q ss_pred cEEEEEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEeec
Q 033259 77 GMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNY 122 (123)
Q Consensus 77 ~ilI~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~~ 122 (123)
+|+|+|+|.++.++++ +|+|+|||+|+|.+ ++|+|.||||||++
T Consensus 111 ~ilI~V~G~l~~~~~~-~r~F~QtFvL~p~~-~~y~V~NDifR~vd 154 (154)
T 3nv0_B 111 GMLLNVAGAVTVDGDS-KRAFTQTLLLGVED-GKYKVKSDRFRYVD 154 (154)
T ss_dssp CEEEEEEEEEEETTSC-CEEEEEEEEEEEET-TEEEEEEEEEEECC
T ss_pred eEEEEEEEEEEECCCC-ceeEEEEEEEEEeC-CEEEEEeeEEEecC
Confidence 9999999999999886 89999999999998 99999999999985
No 7
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=100.00 E-value=4e-41 Score=233.97 Aligned_cols=120 Identities=25% Similarity=0.450 Sum_probs=112.4
Q ss_pred CChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEc---------------CcccccHHHHHHHHhcC--CCceeeEE
Q 033259 1 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFE---------------GQKIQGSQNIVAKLTSL--PFQQCQHS 63 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~---------------g~~~~G~~~I~~~l~~l--p~~~~~~~ 63 (123)
+++++||+.||++||++||++|+.|++||+++|+|+|+ |+.+.|+++|.++|.+| |+.+++|+
T Consensus 9 p~~~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~pf~~~~h~ 88 (154)
T 2qiy_A 9 VTVQDICFAFLQNYYERMRTDPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAKVRSLKLK 88 (154)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEccccccccccccccccceEeeCHHHHHHHHHhccCCCCceEEE
Confidence 46799999999999999999999999999999999999 88999999999999999 99999999
Q ss_pred eeEeeeeeeCCC--CcEEEEEEEEEEECCCCcceeeEEEEEeeeCCC-CcEEEEceeEEeec
Q 033259 64 ITTVDCQPSGPA--GGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQ-GSFYVLNDIFRLNY 122 (123)
Q Consensus 64 i~s~d~q~~~~~--~~ilI~V~G~~~~~~~~~~~~F~qtFvL~~~~~-~~y~I~nD~fr~~~ 122 (123)
|.++||||+ .+ ++|+|+|+|.++.++++ +|+|+|||+|+|.++ ++|+|.||+|||++
T Consensus 89 I~s~D~q~~-~~~~~~ilI~V~G~~~~~~~~-~r~F~qtFvL~p~~~~~~y~I~ND~fr~~~ 148 (154)
T 2qiy_A 89 LDTIDFQYT-GHLHKSILIMATGEMFWTGTP-VYKFCQTFILLPSSNGSTFDITNDIIRFIS 148 (154)
T ss_dssp EEEEEEEEE-SGGGCEEEEEEEEEEEETTCC-CEEEEEEEEEEECC---CEEEEEEEEEEEC
T ss_pred EEEEEEEEc-cCCCCEEEEEEEEEEEECCCC-CceEEEEEEEEEeCCCCcEEEEEEEEEEEc
Confidence 999999999 44 89999999999998876 999999999999985 68999999999986
No 8
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=100.00 E-value=2.8e-39 Score=221.55 Aligned_cols=117 Identities=29% Similarity=0.541 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCC-----CCc
Q 033259 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGP-----AGG 77 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~-----~~~ 77 (123)
+.++|++||++||++||++|+.|++||+++|+|+|+|+.+.|+++|.++|.+|| .++|+|.++||||++. +++
T Consensus 13 a~~v~~~Fv~~YY~~~d~~r~~L~~~Y~~~S~ls~~g~~~~G~~~I~~~l~~Lp--~~~h~i~s~d~q~~~~~~~~~~~~ 90 (140)
T 1jkg_A 13 ACRAAEEFVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLP--SSEFQISVVDCQPVHDEATPSQTT 90 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEETTEEEESHHHHHHHHHHSC--CEEEEEEEEEEEECCTTTSTTCCE
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHhcCCCcEEEECCeeecCHHHHHHHHHhCC--CceeEEEEEEEEEcCCcccCCCCe
Confidence 679999999999999999999999999999999999999999999999999999 5579999999999942 589
Q ss_pred EEEEEEEEEEECCCCcceeeEEEEEeeeCC---CCcEEEEceeEEeec
Q 033259 78 MLVFVSGNLQLAGEQHALKFSQMFHLMPTP---QGSFYVLNDIFRLNY 122 (123)
Q Consensus 78 ilI~V~G~~~~~~~~~~~~F~qtFvL~~~~---~~~y~I~nD~fr~~~ 122 (123)
++|+|+|.++.++++ +|+|+|||+|+|++ +++|+|.||+|||++
T Consensus 91 ilI~V~G~~~~~~~~-~r~F~qtF~L~p~~~p~~~~~~I~nD~frl~~ 137 (140)
T 1jkg_A 91 VLVVICGSVKFEGNK-QRDFNQNFILTAQASPSNTVWKIASDCFRFQD 137 (140)
T ss_dssp EEEEEEEEEEETTSC-CEEEEEEEEEEEECCSSSCEEEEEEEEEEETT
T ss_pred EEEEEEEEEEECCCC-ceeeeEEEEEEecCCCCCCeEEEEeeEEEeec
Confidence 999999999998876 89999999999853 288999999999986
No 9
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=99.97 E-value=7.5e-31 Score=191.05 Aligned_cols=117 Identities=24% Similarity=0.471 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCc------------------------------------------
Q 033259 3 PDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQ------------------------------------------ 40 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~------------------------------------------ 40 (123)
+++++.+||++||+++|++|+.|..+|+++|+|+|.+.
T Consensus 13 ~~~~~~~Fl~~Yy~~fDsdR~~L~~lY~~~S~fS~s~~~~~p~~~~~~~~~~~~~~~~~~Y~~~SRNl~ri~~~~~r~~~ 92 (219)
T 1q40_B 13 SRNLATNFIANYLKLWDANRSELMILYQNESQFSMQVDSSHPHLIESGNSGYSGSTDFGYYLNNSRNLTRVSSIKARMAK 92 (219)
T ss_dssp CHHHHHHHHHHHHHHHHSCGGGGGGGCCTTCEEEEEECTTCCCCCCCB------SCCCTTTTTTCCCTTTCCSHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHhhccccEEEEEecCCCCccccccccccccccchhhhhhhccchhcccchhhhhhh
Confidence 67899999999999999999999999999999998742
Q ss_pred ccccHHHHHHHHhcCCCceeeEEe------eEeeeeeeCCCCcEEEEEEEEEEECCC-----------------------
Q 033259 41 KIQGSQNIVAKLTSLPFQQCQHSI------TTVDCQPSGPAGGMLVFVSGNLQLAGE----------------------- 91 (123)
Q Consensus 41 ~~~G~~~I~~~l~~lp~~~~~~~i------~s~d~q~~~~~~~ilI~V~G~~~~~~~----------------------- 91 (123)
...|+++|.++|.+|| +++|++ .++|||+.+..++++|+|+|.+++.+.
T Consensus 93 l~~G~~~I~~~l~~LP--kT~H~l~~~~~s~~vD~~~~p~~~~ilitV~G~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (219)
T 1q40_B 93 LSIGQEQIYKSFQQLP--KTRHDIIATPELFSMEVYKFPTLNGIMITLHGSFDEVAQPEVDGSASSAPSGPRGGSRYHSG 170 (219)
T ss_dssp CEEHHHHHHHHHHTSC--EEECCTTTCGGGCEEEEEECSSTTCEEEEEEEEEEEEECCSSCCCC----------CCSSSS
T ss_pred hccCHHHHHHHHHHCC--CeeEecccCCCceEEEeEecCCCCeEEEEEEEEEEECCCccccccccccccccccccccccc
Confidence 5679999999999999 999999 589999774468999999999997543
Q ss_pred -------CcceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 92 -------QHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 92 -------~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
..+|.|+|||+|.|.++++|+|+||+||+-
T Consensus 171 ~~~~~~~~~~rsF~RtFvL~P~~~~~~~I~nD~l~ir 207 (219)
T 1q40_B 171 PKHKRIPLSKKSFDRTFVVIPGPNGSMIVASDTLLIR 207 (219)
T ss_dssp SCCCCCCCCCEEEEEEEEEECC---CCEEEEEEEEEE
T ss_pred cccccccCCccceEEEEEEEECCCCcEEEEeeEEEEe
Confidence 248999999999998668999999999974
No 10
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=99.97 E-value=2.1e-30 Score=192.29 Aligned_cols=116 Identities=23% Similarity=0.430 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHhhccC-hhhhhccccCCCEEEEcCc---------------------------------ccccHHHH
Q 033259 3 PDSVAKAFVEHYYTTFDAN-RTGLANLYQEGSMLTFEGQ---------------------------------KIQGSQNI 48 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~~-r~~l~~~Y~~~s~~~~~g~---------------------------------~~~G~~~I 48 (123)
++++|++||++||+.||++ |+.|.++|+++|+|+|..+ ...|+++|
T Consensus 14 ~~~~~~~Fv~~Yy~~fD~~~R~~L~~lY~~~s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~~G~~~I 93 (250)
T 1jkg_B 14 LKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNV 93 (250)
T ss_dssp HHHHHHHHHHHHHHHHTSSCGGGGGGTEEEEEEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSEESHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCcHHHHHHhhCcCcEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhccCHHHH
Confidence 4689999999999999998 9999999999999999832 57999999
Q ss_pred HHHHhcCCCceeeEEee--EeeeeeeCCCCcEEEEEEEEEEECC---CCcceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 49 VAKLTSLPFQQCQHSIT--TVDCQPSGPAGGMLVFVSGNLQLAG---EQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 49 ~~~l~~lp~~~~~~~i~--s~d~q~~~~~~~ilI~V~G~~~~~~---~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
.++|.+|| +++|.+. .+|+++. .+++++|+|+|.++..+ +..+|.|+|||+|.|.++|+|+|+||+||+-
T Consensus 94 ~~~l~~LP--~t~H~~~s~~vD~~~~-~~~~i~i~V~G~f~e~~~~~~~~~r~F~rtFvL~p~~~~~~~I~ND~l~l~ 168 (250)
T 1jkg_B 94 VAFLNELP--KTQHDVNSFVVDISAQ-TSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVR 168 (250)
T ss_dssp HHHHTTSC--CEEECGGGCEEEEEEE-CSSCEEEEEEEEEEECSSTTTTCEEEEEEEEEEEECTTSSEEEEEEEEEEE
T ss_pred HHHHHhCC--CeeEeccceEEeeeec-CCCEEEEEEEEEEEECCCCCCCCceeeEEEEEEEECCCCcEEEEeeEEEEE
Confidence 99999999 9999998 6899998 66789999999999866 2348999999999998668999999999985
No 11
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=99.97 E-value=3.9e-31 Score=192.69 Aligned_cols=117 Identities=18% Similarity=0.384 Sum_probs=103.0
Q ss_pred ChHHHHHHHHHHHHHhhccChhhhhccccCCCEEEEcCc---------------------------------------cc
Q 033259 2 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQ---------------------------------------KI 42 (123)
Q Consensus 2 ~~~~i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~---------------------------------------~~ 42 (123)
++++++++||++||++||++|..|..+|+++|+|+|.+. ..
T Consensus 9 ~~~~~~~~Fv~~Yy~~fDsdR~~L~~lY~~~S~fS~s~~~~~p~~~~~~~~~~~~~~~Y~~~SRNl~ri~~~~~r~~~l~ 88 (221)
T 1of5_A 9 ALGQSSTDFATNFLNLWDNNREQLLNLYSPQSQFSVSVDSTIPPSTVTDSDQTPAFGYYMSSSRNISKVSSEKSIQQRLS 88 (221)
T ss_dssp TTCHHHHHHHHHHHHHHHHCGGGGGGGEEEEEEEEEEECCC--------------------------------------C
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHhhCcCcEEEEEecCCCCcccccccccccchhhhhhhccchhcccchhhhhhhhc
Confidence 367899999999999999999999999999999998762 57
Q ss_pred ccHHHHHHHHhcCCCceeeEEe------eEeeeeeeCCCCcEEEEEEEEEEECCCC------------------------
Q 033259 43 QGSQNIVAKLTSLPFQQCQHSI------TTVDCQPSGPAGGMLVFVSGNLQLAGEQ------------------------ 92 (123)
Q Consensus 43 ~G~~~I~~~l~~lp~~~~~~~i------~s~d~q~~~~~~~ilI~V~G~~~~~~~~------------------------ 92 (123)
.|+++|.++|.+|| +++|++ .++|||+.+..++++|+|+|.+++.+.+
T Consensus 89 ~G~~~I~~~l~~LP--kT~H~l~~~~~s~~vD~~~~~~~~~i~itV~G~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (221)
T 1of5_A 89 IGQESINSIFKTLP--KTKHHLQEQPNEYSMETISYPQINGFVITLHGFFEETGKPELESNKKTGKNNYQKNRRYNHGYN 166 (221)
T ss_dssp BHHHHHHHHHHHSC--CEEECTTTSGGGCEEEEEEEGGGTEEEEEEEEEEEEC---------------------------
T ss_pred cCHHHHHHHHHhCC--CeeEecccCCCceEEEeEEcCCCCeEEEEEEEEEEECCCccccccccccccccccccccccccc
Confidence 79999999999999 899999 5899999944479999999999986542
Q ss_pred -------cceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 93 -------HALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 93 -------~~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
.+|.|+|||+|.|. +++|+|+||+||+-
T Consensus 167 ~~~~~~~~~rsF~RTFvL~P~-~~~~~I~nD~l~ir 201 (221)
T 1of5_A 167 STSNNKLSKKSFDRTWVIVPM-NNSVIIASDLLTVR 201 (221)
T ss_dssp --CCSCCEEEEEEEEEEEEEE-TTEEEEEEEEEEEE
T ss_pred ccccccCCccceEEEEEEEec-CCeEEEEeeEEEee
Confidence 47999999999999 59999999999973
No 12
>3nv0_A Nuclear RNA export factor 2; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=99.93 E-value=2.7e-25 Score=160.44 Aligned_cols=115 Identities=24% Similarity=0.407 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHhhccC-----hhhhhcccc-CCCEEEEc----C---------------------------------
Q 033259 3 PDSVAKAFVEHYYTTFDAN-----RTGLANLYQ-EGSMLTFE----G--------------------------------- 39 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~~-----r~~l~~~Y~-~~s~~~~~----g--------------------------------- 39 (123)
..+++..|+++||..+|.+ |+.|..+|+ ++|+|+.. .
T Consensus 12 ~~~~v~~Fl~~yf~~yD~~d~~~~R~~Ll~~Y~~~~a~FSltv~~~~~p~~~~~~~~~~~~~~Y~~~SRNl~k~~~~~~~ 91 (205)
T 3nv0_A 12 VRTLVEEFIITYYKIYDGADGQQTRKQLLDAYDTNNSTFTHTVVCLWDPIKFVMYPDSESYRMYLRTSHNVLNQEYFAAN 91 (205)
T ss_dssp HHHHHHHHHHHHHHHHCSTTHHHHGGGGGGGBCSSSCEEEEEEECCCCSSSCCCCSCHHHHHHHHHTCCCGGGCCTTTTS
T ss_pred HHHHHHHHHHHHHHHhcCCCchhhHHHHHHhhCccCcEEEEEecCCCCcccccccccccchhhhhhhccccccccccHHH
Confidence 4688999999999999996 999999999 68987631 0
Q ss_pred ---cccccHHHHHHHHhcCCCceeeEEeeE--eeeeeeCCCCcEEEEEEEEEEEC--------CCCcceeeEEEEEeeeC
Q 033259 40 ---QKIQGSQNIVAKLTSLPFQQCQHSITT--VDCQPSGPAGGMLVFVSGNLQLA--------GEQHALKFSQMFHLMPT 106 (123)
Q Consensus 40 ---~~~~G~~~I~~~l~~lp~~~~~~~i~s--~d~q~~~~~~~ilI~V~G~~~~~--------~~~~~~~F~qtFvL~~~ 106 (123)
....|+++|.++|.+|| +++|++.+ +||||. .+++++|+|+|.+++. ++..+|.|+|||+|.|.
T Consensus 92 r~~~L~~G~~~I~~~L~~LP--~T~H~~~s~~vD~~p~-~~~~l~i~V~G~f~e~~~~~~~~~~~~~~r~FsRtFiL~P~ 168 (205)
T 3nv0_A 92 RASRISHGAMDIVVALSRLP--ATIHLMDTFVVDVFLV-SATLLGFTLHGTFRDGPSAIKPENTEEHDNYFTRTFMVAPR 168 (205)
T ss_dssp SCCSCEEHHHHHHHHHHHSC--CEEECGGGCEEEEEEE-CSSCEEEEEEEEEEETHHHHSCCSCSTTCEEEEEEEEEEEC
T ss_pred HHHHHhhCHHHHHHHHHhCC--CeEEecCceEEEEEEe-CCCeEEEEEEEEEEEcccccccccCCCCCceeEEEEEEEEC
Confidence 03479999999999999 99999986 799999 5678999999999986 13348999999999998
Q ss_pred CCCcEEEEceeEEe
Q 033259 107 PQGSFYVLNDIFRL 120 (123)
Q Consensus 107 ~~~~y~I~nD~fr~ 120 (123)
++|+|+|+||++-+
T Consensus 169 ~~g~~~I~ND~L~I 182 (205)
T 3nv0_A 169 GEGKVAIVSDQLFI 182 (205)
T ss_dssp STTCEEEEEEEEEE
T ss_pred CCCcEEEEecEEEe
Confidence 77999999999865
No 13
>1q42_A MTR2, mRNA transport regulator MTR2; NTF2-fold, nuclear export, translation; 1.75A {Candida albicans} SCOP: d.17.4.2 PDB: 1q40_A
Probab=99.88 E-value=3.1e-23 Score=146.20 Aligned_cols=102 Identities=18% Similarity=0.291 Sum_probs=90.8
Q ss_pred ChHHHHHHHHHHHHHhhccChh-----hhh------ccc----cCCCEEEEcCccc------ccHHHHHHHHhcCCCcee
Q 033259 2 DPDSVAKAFVEHYYTTFDANRT-----GLA------NLY----QEGSMLTFEGQKI------QGSQNIVAKLTSLPFQQC 60 (123)
Q Consensus 2 ~~~~i~~~Fv~~YY~~l~~~r~-----~l~------~~Y----~~~s~~~~~g~~~------~G~~~I~~~l~~lp~~~~ 60 (123)
++.+.|+.|++.||..||+.|. .|. ++| .++|.++|||+++ .|+++|.+.|..|| .+
T Consensus 24 ~~~r~aE~F~K~yyasLD~~r~~~~~~ql~~v~~f~~ly~~~l~~~a~liwNGnp~~~~~~~~gr~~fqk~w~~lP--~S 101 (201)
T 1q42_A 24 DPTQQLEPFLKRFLASLDLLYTQPTSQPFPNVESYATQLGSNLKRSSAIIVNGQPIIPSPQEDCKLQFQKKWLQTP--LS 101 (201)
T ss_dssp CGGGTHHHHHHHHHHHHSCCCCCCTTCSSCCHHHHHTTTTTTEEEEEEEEETTEECCCCSSCCHHHHHHHHHHTSC--CE
T ss_pred CcchhHHHHHHHHHHHhcccccccchhhccchhHHHHHhccccCCccEEEEcCcccccccccccHHHHHHHHHhCC--Cc
Confidence 5778999999999999999886 777 888 7889999999999 99999999999999 89
Q ss_pred eEEeeEeeeeeeCCCCcEEEEEEEEEEECCCCcceeeEEEEEeeeC
Q 033259 61 QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPT 106 (123)
Q Consensus 61 ~~~i~s~d~q~~~~~~~ilI~V~G~~~~~~~~~~~~F~qtFvL~~~ 106 (123)
.|.+.++||||++..++++|.|+|.|++++++ .++|.|+|+|.+.
T Consensus 102 qHqL~SlDahpIpGq~T~lI~asGkVrFDesg-r~~fgQsf~Lta~ 146 (201)
T 1q42_A 102 SHQLTSYDGHLIPGTGTFVVHFSAKVRFDQSG-RNRLGESADLFQE 146 (201)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEEEBCSS-CCTTSCCC-----
T ss_pred ceeeeeeecceeCCCcEEEEEEeEEEEECCCC-cCcCCCcEEEecc
Confidence 99999999999977789999999999999987 8999999999865
No 14
>1of5_B MTR2, YKL186C, mRNA transport regulator MTR2; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=99.79 E-value=4.9e-19 Score=123.55 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHhhccCh-----hhhhccccCCCEEEEcCcccccHHHHHHHHh-cCCCceeeEEeeEeeeeeeCCCCc
Q 033259 4 DSVAKAFVEHYYTTFDANR-----TGLANLYQEGSMLTFEGQKIQGSQNIVAKLT-SLPFQQCQHSITTVDCQPSGPAGG 77 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~~r-----~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~-~lp~~~~~~~i~s~d~q~~~~~~~ 77 (123)
.++|+.||++||..||..| +.+..|+.+.+.+++||+++.++.+..+.|. ++| .++|+|+++|||.+++.++
T Consensus 16 ~~aae~FVk~~y~aLd~~r~~~l~~~lssF~p~~~~Ii~NG~p~a~p~~fqeiw~~Q~p--~T~hel~S~D~HVIngsgs 93 (184)
T 1of5_B 16 AQITATFTKKILAHLDDPDSNKLAQFVQLFNPNNCRIIFNATPFAQATVFLQMWQNQVV--QTQHALTGVDYHAIPGSGT 93 (184)
T ss_dssp HHHHHHHHHHHHHHHHCCCCC-CHHHHTTBCSS-CCEEETTEEESCHHHHHHHHHHHSC--CCEEEEEEEEEEEETTTTE
T ss_pred hhHHHHHHHHHHHHhcccccchhhhhhhhcCCCCceEEECCeEcCCHHHHHHHHHhcCC--CceEEEEeEEEEEECCCCe
Confidence 4789999999999999988 8888998888999999999999999999998 899 8899999999999977789
Q ss_pred EEEEEEEEEEECCCCcceeeEEEEEeeeC
Q 033259 78 MLVFVSGNLQLAGEQHALKFSQMFHLMPT 106 (123)
Q Consensus 78 ilI~V~G~~~~~~~~~~~~F~qtFvL~~~ 106 (123)
++|+|+|.|++++++ .-+|.++|+|.|.
T Consensus 94 ivv~VsgkVRFdEsg-rd~fgEtfvLvpn 121 (184)
T 1of5_B 94 LICNVNCKVRFDESG-RDKMGQDATVPIQ 121 (184)
T ss_dssp EEEEEEEEEECC-----------------
T ss_pred EEEEEEEEEEECCCC-CCCCCCeEEECCC
Confidence 999999999998775 4689999999987
No 15
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=98.50 E-value=2.3e-06 Score=57.35 Aligned_cols=112 Identities=13% Similarity=0.232 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhcC---CCceeeEEeeEeeeeeeCCCCcEEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSL---PFQQCQHSITTVDCQPSGPAGGMLV 80 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~d~q~~~~~~~ilI 80 (123)
+.-.+.+..|+..++. +.+.+..+|.+++.+...|....|+++|.+.+... ++....+.+...+.... .++.-++
T Consensus 19 ~~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~A~v 97 (143)
T 4i4k_A 19 AAVAALPARIVAAWADHDADRFADVFAEDGTMILPGLFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDARLL-GDGIALL 97 (143)
T ss_dssp HHHHTHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEE-ETTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhhcCceEEeCCCeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEEEEc-CCCEEEE
Confidence 3456789999999996 78999999999999988898899999999987542 22355566666666555 3344444
Q ss_pred EEEEEEEECCCC---cceeeEEEEEeeeCCCCcEEEEceeE
Q 033259 81 FVSGNLQLAGEQ---HALKFSQMFHLMPTPQGSFYVLNDIF 118 (123)
Q Consensus 81 ~V~G~~~~~~~~---~~~~F~qtFvL~~~~~~~y~I~nD~f 118 (123)
...|.+..++.+ ..+.+.+|+++.+.+ ++|.|....=
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~~~T~v~~r~~-g~WrI~~~h~ 137 (143)
T 4i4k_A 98 ITEGGILAPGETEASGDGAVRASWLAVEQD-GQWRLAAYQN 137 (143)
T ss_dssp EEEEEEECTTCSSCCGGGEEEEEEEEEEET-TEEEEEEEEE
T ss_pred EeccceecCCCCCCCcccceEEEEEEEEEC-CcEEEEEecC
Confidence 455656555542 135678899999887 8999987643
No 16
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=98.26 E-value=3.5e-05 Score=49.31 Aligned_cols=115 Identities=17% Similarity=0.239 Sum_probs=75.3
Q ss_pred ChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-cccccHHHHHHHHhcCC-CceeeEEeeEeeeeeeCCCCcE
Q 033259 2 DPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-QKIQGSQNIVAKLTSLP-FQQCQHSITTVDCQPSGPAGGM 78 (123)
Q Consensus 2 ~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l~~lp-~~~~~~~i~s~d~q~~~~~~~i 78 (123)
+.++.-+..+..|+..++. +.+.|..+|.+++.+...+ ....|+++|.+.+..+. .....+.+...+.... . +..
T Consensus 3 ~~~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~v~~~-g-d~A 80 (129)
T 3hx8_A 3 SAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDMGISELKLTTLDVQES-G-DFA 80 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHHTTCEEEEEEEEEEEEE-T-TEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHhCCCceEEEEEEEEEcC-C-CEE
Confidence 3456678899999999997 7899999999999986543 46899999999876532 1125667776666544 2 322
Q ss_pred EEEEEEEEEEC---CCCcce--eeEEEEEeeeCCCCcEEEEceeEEe
Q 033259 79 LVFVSGNLQLA---GEQHAL--KFSQMFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 79 lI~V~G~~~~~---~~~~~~--~F~qtFvL~~~~~~~y~I~nD~fr~ 120 (123)
+ +.|.+... ..+.+. .-.-+.++.+.++|+|.|..|.+.-
T Consensus 81 ~--~~~~~~~~~~~~~G~~~~~~g~~~~v~~r~~dG~W~i~~~~~~~ 125 (129)
T 3hx8_A 81 F--ESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNS 125 (129)
T ss_dssp E--EEEEEEEEEECTTSCEEEEEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred E--EEEEEEEEeeCCCCCeeeeeEEEEEEEEECCCCcEEEEEeeccc
Confidence 2 23333221 112122 2334556667634999999998753
No 17
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=98.21 E-value=1.4e-05 Score=54.71 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEE-cCcccccHHHHHHHHhcC---CCceeeEEeeEeeeeeeCCCCcEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF-EGQKIQGSQNIVAKLTSL---PFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~-~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~d~q~~~~~~~il 79 (123)
+.-...+..|+..++. +.+.+..+|.+++.+.. .|....|+++|.+.+... ++....+.+...+.... .++..+
T Consensus 16 ~aI~~~~~~~~~A~~~~D~d~~~~lfa~Da~~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~d~A~ 94 (172)
T 3cu3_A 16 SAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFV-NSQLAL 94 (172)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCeEEEeCCCCeEECHHHHHHHHHHHhhccCCCcEEEEEEeEEEEe-CCCEEE
Confidence 3456789999999986 78999999999999875 788999999999987653 22234444444444444 233444
Q ss_pred EEEEEEEEECCCC---cceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 80 VFVSGNLQLAGEQ---HALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 80 I~V~G~~~~~~~~---~~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
+...+.+...+.. .......++++.+.+ |+|.|......
T Consensus 95 v~~~~~~~~~g~~~~~~~~~~~~t~v~~r~d-G~WrI~~~~~s 136 (172)
T 3cu3_A 95 MLVVIRVILPGQTETSASRDSLPLYVVTKGD-EGWQIEGLLNT 136 (172)
T ss_dssp EEEEEEEECTTCSSBCGGGCBCCEEEEEEET-TEEEEEEEECC
T ss_pred EEEEEEEEeCCCCCcCCccceEEEEEEEEeC-CeEEEEEEEcC
Confidence 4455556655431 124455677777775 99999987544
No 18
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=98.20 E-value=2.7e-05 Score=51.52 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEE-EcCcccccHHHHHHHHhcCCC---ceeeEEeeEeeeeeeCCCCcEEE
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLT-FEGQKIQGSQNIVAKLTSLPF---QQCQHSITTVDCQPSGPAGGMLV 80 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~-~~g~~~~G~~~I~~~l~~lp~---~~~~~~i~s~d~q~~~~~~~ilI 80 (123)
.-++.+..|+..++. +.+.+..+|.+++.+. .+|.+..|+++|.+.+..+.- ......+..+..... . +..++
T Consensus 4 ~I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~-g-d~A~~ 81 (142)
T 2gxf_A 4 QLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEA-G-DTVLV 81 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEE-T-TEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEc-C-CEEEE
Confidence 356778999999986 7899999999999985 457889999999999886431 123344455555444 2 33333
Q ss_pred EEEEEEEE--CCCCcceeeEEEEEeeeCCCCcEEEEcee
Q 033259 81 FVSGNLQL--AGEQHALKFSQMFHLMPTPQGSFYVLNDI 117 (123)
Q Consensus 81 ~V~G~~~~--~~~~~~~~F~qtFvL~~~~~~~y~I~nD~ 117 (123)
.....+.. ++.+....-.-++++++..+|+|.|.-|.
T Consensus 82 ~~~~~~~~~~~G~~~~~~g~~t~v~~r~~dG~Wri~~d~ 120 (142)
T 2gxf_A 82 LSQTLLDSDKKDSEYAMERRATYVFKKNAQGEWLCVIDN 120 (142)
T ss_dssp EEEEECCC---------EEEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEEECCCCCeEeeeEEEEEEEEECCCCCEEEEEEC
Confidence 33322221 22211122234778888555899998775
No 19
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=98.18 E-value=6.5e-05 Score=48.45 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc-ccccHHHHHHHHhcCC--Cc-eeeEEeeEeeeeeeCCCCcEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ-KIQGSQNIVAKLTSLP--FQ-QCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~-~~~G~~~I~~~l~~lp--~~-~~~~~i~s~d~q~~~~~~~il 79 (123)
+..++.+..|+..++. +.+.+..+|.+++.+...+. +..|+++|.+.+..+. +. ...+.+..+ ... .++..+
T Consensus 11 ~~i~~~~~~~~~a~~~~D~~~~~~l~a~D~v~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i--~~~-~gd~a~ 87 (135)
T 3d9r_A 11 AVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIKEV--VQT-SADWAF 87 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEE--EEE-ETTEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCcccCHHHHHHHHHHHHhhcCCceeEEEEEE--EEe-cCCEEE
Confidence 4457889999999996 78999999999998876654 5579999999887643 11 222333333 231 122233
Q ss_pred EE--EEEEEEEC--CCCcceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 80 VF--VSGNLQLA--GEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 80 I~--V~G~~~~~--~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
+. ..|..... +.+......-++++.+..+|+|.|..+.|..+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~dG~W~i~~~~~s~~ 133 (135)
T 3d9r_A 88 VRSATEGTETNKATGVVTPAAYQELFLLRKSATGSWQTARYCTSKI 133 (135)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred EEEEEEEEEecCCCCCceeecccEEEEEEecCCCcEEEEEEeeccc
Confidence 22 23433332 22112234556778777349999999998754
No 20
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=98.07 E-value=9.4e-05 Score=49.69 Aligned_cols=115 Identities=16% Similarity=0.300 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEE-EcCcccccHHHHHHHHhcC---CCceeeEEeeEeeeeeeCCCCcEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLT-FEGQKIQGSQNIVAKLTSL---PFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~-~~g~~~~G~~~I~~~l~~l---p~~~~~~~i~s~d~q~~~~~~~il 79 (123)
..-++++..|...++. +.+.+..+|.+++.+. ..|....|+++|.+.+... +++.+.+.+...+.... .++.-+
T Consensus 6 ~aI~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~D~A~ 84 (146)
T 3gzr_A 6 DAIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTI-APGSAL 84 (146)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEc-CCCEEE
Confidence 3457889999999997 7899999999999987 6788899999999877532 23344555555555544 233333
Q ss_pred EEEEEEEE----ECCCCc-ceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 80 VFVSGNLQ----LAGEQH-ALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 80 I~V~G~~~----~~~~~~-~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
+.+...+. .++.+. ......|+++.+.+ |+|.|..+.-..+
T Consensus 85 v~~~~~l~g~~~~~G~~~~~~~~~~t~v~vr~d-g~WrI~a~h~s~v 130 (146)
T 3gzr_A 85 AVVTLIQDAYVTPDGRQMPRAHDRLTLLAVERE-GVWRFIHGHNTIV 130 (146)
T ss_dssp EEEEEEECCEECTTCCEECCEEEEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred EEEEEEecceeCCCCCcCCccCcEEEEEEEEEC-CEEEEEEEecccC
Confidence 33332221 122210 14578899998876 9999998766544
No 21
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=98.03 E-value=0.00022 Score=47.60 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCC-ceeeEEeeEeeeeeeCCCCcEEEE
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPF-QQCQHSITTVDCQPSGPAGGMLVF 81 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~-~~~~~~i~s~d~q~~~~~~~ilI~ 81 (123)
++..++.+..|+..++. +.+.|..+|.+++.+...|.+..|+++|.+.+...-. .......+..+++.. .+-.+...
T Consensus 16 e~aI~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g~~~~Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v~-GD~A~~~~ 94 (139)
T 3rob_A 16 ELAIRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGRLPFGKEEFLAACEQNDQRVIIEASATFEEIVIV-EPMAYTRT 94 (139)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCBCHHHHHHHHHHHHHHEEEEEEEEEEEEEEE-TTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCCCCccCHHHHHHHHHHHHHhcCCCCceEEEEEEEc-CCeEEEEE
Confidence 45678899999999986 8999999999999998888877799999987654210 011222333344444 33222221
Q ss_pred -EEEEEEECCCCcce--eeEEEEEeeeCCCCcEEEEceeE
Q 033259 82 -VSGNLQLAGEQHAL--KFSQMFHLMPTPQGSFYVLNDIF 118 (123)
Q Consensus 82 -V~G~~~~~~~~~~~--~F~qtFvL~~~~~~~y~I~nD~f 118 (123)
.....+..+.+.+. .....++++++.+|+|.|.-|.-
T Consensus 95 ~~~~~~t~~~~g~~~~~~g~~~~v~rK~~dG~W~i~~d~~ 134 (139)
T 3rob_A 95 HLHIKVTPRSGGAVRELAGHAMSIFRRSMFGEWQLARDAN 134 (139)
T ss_dssp EEEEEEEETTSCCCEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEecCCCCceeEeeccEEEEEEECCCCcEEEEEEhh
Confidence 12233332221133 33366788886669999998863
No 22
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=97.95 E-value=0.00032 Score=47.02 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEE--cCcccccHHHHHHHHhcCCCc--eeeEEeeEeeeeeeCCCCcE
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF--EGQKIQGSQNIVAKLTSLPFQ--QCQHSITTVDCQPSGPAGGM 78 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~--~g~~~~G~~~I~~~l~~lp~~--~~~~~i~s~d~q~~~~~~~i 78 (123)
++--...+..|+..++. +.+.|..+|.+++.+.. ++....|+++|.+.+..+.-. ........+ +.. .++.
T Consensus 19 ~~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i--~~~-~gd~- 94 (156)
T 3h51_A 19 AREVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTV--RLL-DDDS- 94 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEE--EEC-SSSE-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEE--EEe-cCCe-
Confidence 35567788999999986 78999999999998753 355789999999887654200 222233333 222 2222
Q ss_pred EEEEEEEEEEC---CCCc--ceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 79 LVFVSGNLQLA---GEQH--ALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 79 lI~V~G~~~~~---~~~~--~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
-.+.|.+... .++. ...--.|+++.+.+ |+|.|+.+....+
T Consensus 95 -A~~~~~~~~~~~~~~G~~~~~~~r~t~v~~r~d-G~WkIv~~H~S~~ 140 (156)
T 3h51_A 95 -AVDAGVYTFTLTDKNGKKSDVQARYTFVYEKRD-GKWLIINHHSSAM 140 (156)
T ss_dssp -EEEEEEEEEEEECTTSCEEEEEEEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred -EEEEEEEEEEEEcCCCCeEEEEeEEEEEEEEEC-CEEEEEEEeecCC
Confidence 2234444321 1221 22345567777775 9999999877653
No 23
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=97.92 E-value=0.00082 Score=43.24 Aligned_cols=110 Identities=12% Similarity=0.059 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhhcc-Chhhhhccc--cCCCEEEEcCcccccHHHHHHHHhc-CC--CceeeEEeeEeeeeeeCCCCc
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLY--QEGSMLTFEGQKIQGSQNIVAKLTS-LP--FQQCQHSITTVDCQPSGPAGG 77 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y--~~~s~~~~~g~~~~G~~~I~~~l~~-lp--~~~~~~~i~s~d~q~~~~~~~ 77 (123)
++--..-++.++..++. |.+.+..+| +++..+...+....|.++|.+.+.. ++ +......++..+.+.. .++
T Consensus 4 ~~~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~~~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~~-~~~- 81 (122)
T 3b7c_A 4 TDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKML-SNY- 81 (122)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSSCEEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEE-ETT-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCCccccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEEc-CCC-
Confidence 34455678888898886 789999999 7777776655589999999997654 33 2224445555666654 222
Q ss_pred EEEEEEEEEEECCC-CcceeeEEEEEeeeCCCCcEEEEceeE
Q 033259 78 MLVFVSGNLQLAGE-QHALKFSQMFHLMPTPQGSFYVLNDIF 118 (123)
Q Consensus 78 ilI~V~G~~~~~~~-~~~~~F~qtFvL~~~~~~~y~I~nD~f 118 (123)
+ ..|.|....... ..+. -.-|.++.+.+ ++|.|+.+..
T Consensus 82 ~-a~v~~~~~~~~~~~~~~-~r~T~v~~k~~-g~W~Iv~~H~ 120 (122)
T 3b7c_A 82 A-AMVVGRWDLKRLKDTPT-GVFTLLVEKID-DRWVITMDHS 120 (122)
T ss_dssp E-EEEEEEEEEECSSCCCE-EEEEEEEEEET-TEEEEEEEEE
T ss_pred E-EEEEEEEEEEccCCCCC-cEEEEEEEEeC-CCEEEEEEec
Confidence 3 233455554322 1122 24677888877 8999998754
No 24
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=97.80 E-value=0.00027 Score=46.97 Aligned_cols=111 Identities=9% Similarity=0.028 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHH-HHhcC-C-CceeeEEeeEeeeeeeCCCCcEE
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVA-KLTSL-P-FQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~-~l~~l-p-~~~~~~~i~s~d~q~~~~~~~il 79 (123)
++.....+..|+..++. |.+.+..+|.+++.+...+....|.++|.+ .+... . +....+++..+..... . +..+
T Consensus 29 ~~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-g-d~A~ 106 (148)
T 3bb9_A 29 DSAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMAYLKGLTITPKEHQITIT-G-DIAI 106 (148)
T ss_dssp TSHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTEEECSHHHHHHTHHHHHHHHHHTEEEEEEEEEEEEE-T-TEEE
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHhhCCCeEEEeCCCccCCHHHHHHHhHHHHHHhccCceEEeeeEEEEEc-C-CEEE
Confidence 34567889999999985 889999999999987666656889999988 54321 1 0134556666555554 2 3333
Q ss_pred EEEEEEEEEC--CCCcceeeEEEEEe-eeCCCCcEEEEcee
Q 033259 80 VFVSGNLQLA--GEQHALKFSQMFHL-MPTPQGSFYVLNDI 117 (123)
Q Consensus 80 I~V~G~~~~~--~~~~~~~F~qtFvL-~~~~~~~y~I~nD~ 117 (123)
+...-.+... +.+....+--|+++ .+.+ |+|.|+..-
T Consensus 107 ~~~~~~~~~~~~G~~~~~~~r~T~v~~~k~~-g~WkIvh~H 146 (148)
T 3bb9_A 107 STSISHAQGEYKGKSIDSMTMETLVLIKQAD-GRWKITHVH 146 (148)
T ss_dssp EEEEEEEEECCC--CEEEEEEEEEEEEECTT-SCEEEEEEE
T ss_pred EEEEEEEeeeeCCcccccceEEEEEEeEEcC-CcEEEEEEE
Confidence 3322333322 22212356678888 7765 999998764
No 25
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=97.73 E-value=0.0012 Score=41.69 Aligned_cols=116 Identities=9% Similarity=0.021 Sum_probs=73.1
Q ss_pred CChHHHHHHHHHHHHHhhc-cChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEE
Q 033259 1 MDPDSVAKAFVEHYYTTFD-ANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~-~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~il 79 (123)
|+.++.-....+.|+..+. .+.+.|..+++|+..+...+-...|++++.+.+.+-+......++..+.++.. .+..++
T Consensus 2 m~~~~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~~~~~~~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~-g~~a~~ 80 (123)
T 2r4i_A 2 MNQRDVILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSSGKIALRAVVPSDYIIRII-HDTVVV 80 (123)
T ss_dssp CCHHHHHTHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCEEEEEEEEEEEEEEEE-TTEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHhhhCcCeEEECCCCCCccHHHHHHHHhcCCeEEEEEeecccEEEEE-CCEEEE
Confidence 5655556667788888776 48999999999987776655456788887777776442234456667777777 443333
Q ss_pred EEEEEEEE--ECCCCcceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 80 VFVSGNLQ--LAGEQHALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 80 I~V~G~~~--~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
+. .-.+. ..+.+....+-.|.+..+.+ ++|.|+...-.
T Consensus 81 ~~-~~~~~~~~~g~~~~~~~r~t~vw~r~~-g~W~iv~~h~S 120 (123)
T 2r4i_A 81 SV-NIEIKGEYMEHTLDNTFRYLRVWKLFD-GNWKVIAGSCT 120 (123)
T ss_dssp EE-EEEEEEEETTEEEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred EE-EEEEEEEECCcceeEEEEEEEEEEEeC-CeEEEEEEEEE
Confidence 33 22222 23332122334455667766 89999876543
No 26
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=97.72 E-value=0.0013 Score=43.03 Aligned_cols=113 Identities=9% Similarity=0.107 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC--cccccHHHHHHHHh----cCCCceeeEEeeEeeeeeeCCC
Q 033259 3 PDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG--QKIQGSQNIVAKLT----SLPFQQCQHSITTVDCQPSGPA 75 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g--~~~~G~~~I~~~l~----~lp~~~~~~~i~s~d~q~~~~~ 75 (123)
.++.-...+..|+..++. +.+.+..+|.+++.+...+ ....|+++|.+.+. ..| ...++++.....+.. .+
T Consensus 6 ~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~D~v~~~~~~~~~~~G~~air~~~~~~~~~~~-~~~~~~~~~~~v~~~-gd 83 (142)
T 3f7s_A 6 AESEIRQLIERWMQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCT-GPMVFELAQLTVHAA-GD 83 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCC-SCEEEEEEEEEEEEE-TT
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHHhCC-CceEEEEeeeEEEEc-CC
Confidence 345677889999999986 7899999999998764332 34579999988753 333 245677777666554 33
Q ss_pred CcEEEEEEEEEEECC-CCcceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 76 GGMLVFVSGNLQLAG-EQHALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 76 ~~ilI~V~G~~~~~~-~~~~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
..++...-.+.... .+.....--|+++++.+ |+|.|+.+-..
T Consensus 84 -~A~~~~~~~~~~~~~~g~~~~~r~T~v~~r~~-g~W~ivh~H~S 126 (142)
T 3f7s_A 84 -LALAHWLNRCGPGDDESQCGFMRATVGYRRQG-GQWQVIHEHWS 126 (142)
T ss_dssp -EEEEEEEEEEEESSCGGGCEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred -EEEEEEEEEEeeecCCCcceeeEEEEEEEEeC-CEEEEEEEeec
Confidence 22222222333221 11234455678888876 99999877654
No 27
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=97.66 E-value=0.00093 Score=44.69 Aligned_cols=110 Identities=11% Similarity=0.129 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCC--EEEEc-CcccccHHHHHHHHhcCCC--ceeeEEeeEeeeeeeCCCCcEEE
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGS--MLTFE-GQKIQGSQNIVAKLTSLPF--QQCQHSITTVDCQPSGPAGGMLV 80 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s--~~~~~-g~~~~G~~~I~~~l~~lp~--~~~~~~i~s~d~q~~~~~~~ilI 80 (123)
.++-...||..|.. |.+.|..+|.++. .+.+. |....|.++|.+.+..+=- ...++++..+.+... .+.-++
T Consensus 10 ~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~~~~~~~i~~~~v~v~~~--gd~A~v 87 (144)
T 3gwr_A 10 PEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFGAAGRFRLQVKAVHEIRQ--ADHVIR 87 (144)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHHHHCCEEEEEEEEEEEEC--SSEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHcCCCcEEEEEEEEEEEec--CCEEEE
Confidence 45667889999986 8999999999984 33444 4678999999988754310 033344444444332 333455
Q ss_pred EEEEEEEECCC-CcceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 81 FVSGNLQLAGE-QHALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 81 ~V~G~~~~~~~-~~~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
.+...+...+. +....+--|.++.+.+ |+|.|+.+--.
T Consensus 88 ~~~e~~~~~~~~g~~~~~r~T~V~~r~~-g~WrivhhH~S 126 (144)
T 3gwr_A 88 IVDEFLTIGDETAPRPAILATNVYRREA-DGWRMVLHHAS 126 (144)
T ss_dssp EEEEEEEETTCSSCCCCEEEEEEEEECS-SSEEEEEEEEE
T ss_pred EEEEEEEecCCCCceeeEEEEEEEEEEC-CEEEEEEEecC
Confidence 55566666432 2124567788888887 89999876543
No 28
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=97.63 E-value=0.0017 Score=42.44 Aligned_cols=105 Identities=16% Similarity=0.266 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEE--EcCc-ccc-cHHHHHHHHhc-CCCceeeEEeeEeeeeeeCCCCcEE
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLT--FEGQ-KIQ-GSQNIVAKLTS-LPFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~--~~g~-~~~-G~~~I~~~l~~-lp~~~~~~~i~s~d~q~~~~~~~il 79 (123)
.-.+-+..|+..++. +.+.|.+.|+|++.+. .+|. ... ..++..+.+.+ -|....++.|.+++... +.-.
T Consensus 13 aI~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~~p~~~~~~~I~~I~i~g----d~A~ 88 (125)
T 3duk_A 13 GITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSNGPAKNVQSRITNIDIVG----TVAH 88 (125)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHHCCCTTCEEEEEEEEEET----TEEE
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhccCCCCcccceEEEEEEEC----CEEE
Confidence 345668999999996 7899999999999885 3555 222 34555555543 34446778887776632 2222
Q ss_pred EEEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEe
Q 033259 80 VFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 80 I~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~ 120 (123)
+.| .+..-+ ...|...|.|.+.+ |+|.|+|=+|+.
T Consensus 89 a~v----~~~~~~-~~~f~D~l~L~k~d-g~WkIv~K~~~~ 123 (125)
T 3duk_A 89 ARV----EAENWT-NFKFSDLFLLLKLD-GKWTIVNKVFHL 123 (125)
T ss_dssp EEE----EEECSS-SCCEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEE----EEEEcC-CCeEEEEEEEEEeC-CEEEEEEEEEEe
Confidence 222 211112 46899999999998 999999999975
No 29
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=97.61 E-value=0.0016 Score=42.60 Aligned_cols=112 Identities=8% Similarity=0.037 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEE---cCcccccHHHHHHHHhcC-C--CceeeEEeeEeeeeeeCCCCc
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF---EGQKIQGSQNIVAKLTSL-P--FQQCQHSITTVDCQPSGPAGG 77 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~---~g~~~~G~~~I~~~l~~l-p--~~~~~~~i~s~d~q~~~~~~~ 77 (123)
+--.+....|+..+++ +.+.+..+|+++..+.. .|....|.++|.+.+..+ + ......++.....+.. .+..
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~-gd~a 91 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVI-GEDA 91 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEEC-STTE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEe-cCcE
Confidence 3456788899999985 89999999999987753 357889999999988764 2 1234445555556655 3333
Q ss_pred EEEEEEEEEE--ECCCCc--ceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 78 MLVFVSGNLQ--LAGEQH--ALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 78 ilI~V~G~~~--~~~~~~--~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
.++. ...+. .++++. ....-.|+++.+.+ |+|.|+.+...
T Consensus 92 av~~-~~~~~~~~~~~g~~~~~~~r~T~v~~k~~-g~Wkivh~H~S 135 (143)
T 2ux0_A 92 ACIA-YIRLTQYIDGQGRPRTSQSEETRVWHRRD-GKWLNVHYHCS 135 (143)
T ss_dssp EEEE-EEEEEEEECTTSCEEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred EEEE-EeEeeeeecCCCCeeeeeEEEEEEEEEEC-CEEEEEEEeeC
Confidence 3332 22222 232221 23456778888876 99999987654
No 30
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=97.58 E-value=0.0014 Score=43.39 Aligned_cols=113 Identities=12% Similarity=0.146 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCccc-ccHHHHHHHHhcCC-----CceeeEEeeEeeeeeeCCCCc
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKI-QGSQNIVAKLTSLP-----FQQCQHSITTVDCQPSGPAGG 77 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~-~G~~~I~~~l~~lp-----~~~~~~~i~s~d~q~~~~~~~ 77 (123)
..-.+++..|...+|. +.+.+..+|.+++.+...+... .|+++|.+.+...+ ...+.|.+........ . +.
T Consensus 19 ~~I~~l~~~y~~a~D~~d~~~~~~lf~~Da~~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~h~~~~~~i~~~-g-d~ 96 (155)
T 2rfr_A 19 EEIRELIARYGPLADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVTVE-G-DT 96 (155)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEEEE-T-TE
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHhhcCCceEEEcCCCccccCHHHHHHHHHhccccccCCCceeEeCCCeEEEEe-C-CE
Confidence 4456899999999997 6789999999999998876566 99999999887652 2357788876555443 2 22
Q ss_pred EEEEEEEEEEE-CCCCcceee---EEEEEeeeCCCCcEEEEceeEEee
Q 033259 78 MLVFVSGNLQL-AGEQHALKF---SQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 78 ilI~V~G~~~~-~~~~~~~~F---~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
..+...-.+.. ...+ ...+ ..+..+.+.+ |+|.|.+-.++++
T Consensus 97 A~~~~~~~~~~~~~~~-~~~~~~g~y~d~~~r~~-g~Wri~~r~~~~~ 142 (155)
T 2rfr_A 97 ATARCHSVVFRCVSGT-FGSHRVSANRWTFRRTP-AGWRAVRRENALL 142 (155)
T ss_dssp EEEEEEEEEEEEETTE-EEEEEEEEEEEEEEEET-TEEEEEEEEEEES
T ss_pred EEEEEEEEEEEEcCCC-ceEEEeeeeEEEEEECC-CEEEEEEEEEEec
Confidence 22222221111 1111 1111 1235677765 8999998777664
No 31
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=97.49 E-value=0.0043 Score=41.78 Aligned_cols=114 Identities=14% Similarity=0.148 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCC-ceeeEEeeEeeeeeeCCCCcEEEEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPF-QQCQHSITTVDCQPSGPAGGMLVFV 82 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~-~~~~~~i~s~d~q~~~~~~~ilI~V 82 (123)
+.-.+++..|+..+|. +.+.+..+|.+++.+...|....|+++|.+.+..... ..+.|.+........ . +...+..
T Consensus 14 ~~I~~l~~~y~~a~D~~D~~~~~~lf~~Da~~~~~g~~~~G~~~i~~~~~~~~~~~~~~h~~~~~~i~~~-g-d~A~~~~ 91 (170)
T 2chc_A 14 LRIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDGWVIRGRPALREYADAHARVVRGRHLTTDLLYEVD-G-DVATGRS 91 (170)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHCCCCEEEEEEEEEEE-T-TEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHhcccCcEEEEeCCCCcCCHHHHHHHHHHhhcccceEEecCCeEEEEe-C-CEEEEEE
Confidence 4456899999999997 6789999999999998888888999999987765311 257788877655444 2 2222222
Q ss_pred EEEEEE-CCCCcce--eeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 83 SGNLQL-AGEQHAL--KFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 83 ~G~~~~-~~~~~~~--~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
.-.+.. ..++... .-.-+.++.+.+ |+|.|..-.+.+.
T Consensus 92 ~~~~~~~~~~g~~~~~~g~y~d~~~r~d-g~Wri~~r~~~~~ 132 (170)
T 2chc_A 92 ASVVTLATAAGYKILGSGEYQDRLIKQD-GQWRIAYRRLRND 132 (170)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred EEEEEEEcCCCCEEEEEEEEEEEEEEEC-CEEEEEEEEEEEe
Confidence 111111 1121111 112344556655 8999998877653
No 32
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=97.34 E-value=0.0027 Score=42.56 Aligned_cols=115 Identities=10% Similarity=0.142 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHhhcc--ChhhhhccccCCCEEEEcC-c--ccccHHHHHHHHhcC--CCceeeEEeeEeeeeeeCCCCc
Q 033259 5 SVAKAFVEHYYTTFDA--NRTGLANLYQEGSMLTFEG-Q--KIQGSQNIVAKLTSL--PFQQCQHSITTVDCQPSGPAGG 77 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~--~r~~l~~~Y~~~s~~~~~g-~--~~~G~~~I~~~l~~l--p~~~~~~~i~s~d~q~~~~~~~ 77 (123)
..-.+++..|+..+|. +.+.+..+|.+++.+...+ . ...|+++|.+.+... |+..+.|.+........ .++.
T Consensus 28 ~~I~~l~~~y~~alD~~~D~d~~~~lfteDa~~~~~~~g~~~~~G~~~i~~~~~~~~~~~~~~~h~~~~~~I~~~-~gd~ 106 (163)
T 3b8l_A 28 LAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANMSHHAHYLTNFAVTGY-EGDT 106 (163)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEE-CSSE
T ss_pred HHHHHHHHHHHHHHCcCCCHHHHHhhcCCCEEEEecCCCCCCccCHHHHHHHHHHhhccCCceEEEecCEEEEEe-CCCE
Confidence 4567899999999997 5789999999999987642 2 689999999877653 23367788887766534 2232
Q ss_pred EEEEEEEE-EEECCCCcce--eeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 78 MLVFVSGN-LQLAGEQHAL--KFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 78 ilI~V~G~-~~~~~~~~~~--~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
..+..... +...+++.+. .-.-+..+.+.+ |+|.|.+-.+++.
T Consensus 107 A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r~d-g~WrI~~r~~~~~ 152 (163)
T 3b8l_A 107 ASMRAYVIGMGVGKDGRAVTVNGRYFFEVRRTE-KGWKATRYTMDFL 152 (163)
T ss_dssp EEEEEEEEEEEEETTSCEEEEEEEEEEEEEEET-TEEEEEEEEEEES
T ss_pred EEEEEEEEEEEEcCCCCeEEEEEEEEEEEEEeC-CEEEEEEEEEEEE
Confidence 22222222 1122222122 122445666765 8999998877654
No 33
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=97.21 E-value=0.0062 Score=41.60 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-cccccHHHHHHHH-hcC--CCceeeEEeeEeeeeeeCCCCcEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-QKIQGSQNIVAKL-TSL--PFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l-~~l--p~~~~~~~i~s~d~q~~~~~~~il 79 (123)
+.-++++..|...+|. +.+.+..+|.+++.+.+.+ ....|+++|.+.+ ... |+..+.|.+..+..... .++...
T Consensus 31 ~~I~~ll~ry~~alD~~d~d~~~~lfteDa~~~~~~~g~~~G~~~i~~~~~~~~~~~~~~t~H~i~n~~I~~~-g~d~A~ 109 (176)
T 3a76_A 31 AAIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGIGTYKGPEGALDLANNVLWPMFHECIHYGTNLRLEFV-SADKVN 109 (176)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTTEEEEHHHHHHHHHHHTHHHHEEEEEEEEEEEEEEES-SSSEEE
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHhhccCCeEEEcCCCccccCHHHHHHHHHHhhhcccCceEEecCCeEEEEc-CCCeEE
Confidence 4557899999999997 6789999999999987765 3578999999988 542 34478898887666544 213333
Q ss_pred EEEEEEEE--ECCCCcceee--EEEEEeeeCCCCcEEEEceeEEee
Q 033259 80 VFVSGNLQ--LAGEQHALKF--SQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 80 I~V~G~~~--~~~~~~~~~F--~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
+.....+. ....+..... .-+..+.+.+ |+|.|..-.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~gry~d~l~r~d-g~WrI~~r~~~~~ 154 (176)
T 3a76_A 110 GIGDVLLLGNLVEGNQSILIAAVFTDEYERRD-GVWKFSKRNACTN 154 (176)
T ss_dssp EEEEEEEEEEETGGGEEEEEEEEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCceEEEEEEEEEEEEEEC-CEEEEEEEEEEEE
Confidence 32111222 2222111111 1233455665 8999998766553
No 34
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=97.12 E-value=0.022 Score=36.65 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=66.4
Q ss_pred HHHHHHHHHhhcc-ChhhhhccccCCCEE--EEcCcccccHHHHHHHHh-cCCCceeeEEeeEeeeeeeCCCCcEEEEEE
Q 033259 8 KAFVEHYYTTFDA-NRTGLANLYQEGSML--TFEGQKIQGSQNIVAKLT-SLPFQQCQHSITTVDCQPSGPAGGMLVFVS 83 (123)
Q Consensus 8 ~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~--~~~g~~~~G~~~I~~~l~-~lp~~~~~~~i~s~d~q~~~~~~~ilI~V~ 83 (123)
+.-+..|-..++. +.+.|..+|.+++.+ ...|....|.++|.+ +. .++.......+........ .++ ..+ +.
T Consensus 17 ~~~~~~y~~A~~~~D~~~l~~lf~~d~~~~~~~~~~~~~G~~~i~~-~~~~~~~~~~~~~~~~~~~~~~-~~d-~A~-~~ 92 (129)
T 2rcd_A 17 TAAFYRYEKALTGNDVAVLDELFWHDEKTVRYGAGENLYGIEEIRA-FRLARPSAGLDRALRNTVITTY-GHD-MAV-AS 92 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEETTEEEESHHHHHH-HHHHSCCTTCCCEEEEEEEEEB-TTS-EEE-EE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhccCCCCEEEECCCCccCCHHHHHH-HHHhcCCCCCceEEEEEEEEEe-cCc-EEE-EE
Confidence 3444556688875 789999999998743 346778899999999 54 4442223444445555554 222 222 34
Q ss_pred EEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 84 GNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 84 G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
..+...+. .....+|.++.+.+ ++|.|+..-..
T Consensus 93 ~~~~~~~~--~~~g~~t~v~~r~~-~gWrIv~~H~S 125 (129)
T 2rcd_A 93 TEFTRTGS--TKIGRQMQTWVKMP-EGWRIVAAHVS 125 (129)
T ss_dssp EEEECSSC--CSCEEEEEEEEEET-TEEEEEEEEEE
T ss_pred EEEEEcCC--CCceeEEEEEEECC-CcEEEEEEecC
Confidence 45554432 23345688888877 89999987654
No 35
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=97.07 E-value=0.023 Score=37.72 Aligned_cols=111 Identities=7% Similarity=0.056 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCC--EEEEcCcccccHHHHHHHHhcCCC----ceeeEEeeEee-eeeeCCCCcE
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGS--MLTFEGQKIQGSQNIVAKLTSLPF----QQCQHSITTVD-CQPSGPAGGM 78 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s--~~~~~g~~~~G~~~I~~~l~~lp~----~~~~~~i~s~d-~q~~~~~~~i 78 (123)
-......|+..++. +.+.|..+|.++. .+...+-...|.++|.+.+.+-.+ ....+.+..++ .+.. .+..+
T Consensus 12 i~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~I~v~-gd~A~ 90 (145)
T 3soy_A 12 ITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVY-GNAAV 90 (145)
T ss_dssp HHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETTEEEESHHHHHHHCCCCCCCCTEEEEEEEESSCCEEEEE-TTEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCCCcccCHHHHHHHHHHhhhhccccccceEEeeeeEEEEc-CCEEE
Confidence 34556777777765 7899999997763 344444457999999988754221 12334444455 3444 23222
Q ss_pred EE---EEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeE
Q 033259 79 LV---FVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIF 118 (123)
Q Consensus 79 lI---~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~f 118 (123)
.+ .+.|.+..++.+....+-.|.+..+.++++|.|+.+-.
T Consensus 91 v~~~~~~~~~~~~~G~~~~~~~r~T~V~~r~~~ggWkIvh~H~ 133 (145)
T 3soy_A 91 AEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVHVHY 133 (145)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEEEEEEETTTEEEEEEEEE
T ss_pred EEEEEEEEEEEcCCCCeeeeEEEEEEEEEEcCCCCEEEEEEec
Confidence 21 12233322233212245677777774448999998754
No 36
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=96.92 E-value=0.016 Score=37.96 Aligned_cols=94 Identities=11% Similarity=0.092 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc--------ccccHHHHHHHHhcCCC--ceeeEEeeEeeeeeeCCC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ--------KIQGSQNIVAKLTSLPF--QQCQHSITTVDCQPSGPA 75 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~--------~~~G~~~I~~~l~~lp~--~~~~~~i~s~d~q~~~~~ 75 (123)
.+.+++.||..+++ +.+.+..+|+++..+...|. ...|++++.+.+..+.- ....+++..+- . .+
T Consensus 6 ~~~~v~~~~~a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~~~~~~~~~~~--~--~g 81 (143)
T 3dm8_A 6 LWRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRIYRYHRESVM--L--GI 81 (143)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEEEEEEEEEEE--E--CS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcCcceEEEEEEE--E--cC
Confidence 48899999999996 78999999999998876654 36899999998887651 12344444322 1 23
Q ss_pred CcEEEEEEEEEEEC--CCCcceeeEEEEEee
Q 033259 76 GGMLVFVSGNLQLA--GEQHALKFSQMFHLM 104 (123)
Q Consensus 76 ~~ilI~V~G~~~~~--~~~~~~~F~qtFvL~ 104 (123)
+.+.+.+....... +.+....++..|.+.
T Consensus 82 d~v~v~~~~~~~~~~tG~~~~~~~~~~~~v~ 112 (143)
T 3dm8_A 82 DSAASMVRYSLTAAGTNRPISVRMALFTQFQ 112 (143)
T ss_dssp SEEEEEEEEEEEETTTCCEEEEEEEEEEEEE
T ss_pred CeEEEEEEEEEEEeCCCCEEEEEEEEEEEEE
Confidence 34433333332332 332234677766663
No 37
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=96.91 E-value=0.051 Score=37.45 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCC-----------------EEEEc-CcccccHHHHHHHHhcC-C-CceeeEEee
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGS-----------------MLTFE-GQKIQGSQNIVAKLTSL-P-FQQCQHSIT 65 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s-----------------~~~~~-g~~~~G~~~I~~~l~~l-p-~~~~~~~i~ 65 (123)
-..-...||..+.. +.+.|..+|.+++ .+.+. +....|.++|.+.+..+ . ....++++.
T Consensus 14 I~~~~~~~~~A~~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg~~~l~G~~~I~~~~~~~f~~~~~~~~~~~ 93 (170)
T 3cnx_A 14 VGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTEYIQFFLT 93 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhhcCCcccccccccccccccccEEEEcCCCccccCHHHHHHHHHHHHccCCeeEEEEE
Confidence 45678889999986 7899999999884 33455 46799999999876432 1 013555666
Q ss_pred EeeeeeeCCCCcEEEEEEEEEEECCCC-------cce---eeEEEEEeeeCCCCcEEEEceeEEe
Q 033259 66 TVDCQPSGPAGGMLVFVSGNLQLAGEQ-------HAL---KFSQMFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 66 s~d~q~~~~~~~ilI~V~G~~~~~~~~-------~~~---~F~qtFvL~~~~~~~y~I~nD~fr~ 120 (123)
.+..... . +.-++++...+...+.. .+. .+.-|.++++.+ ++|.|+.+...-
T Consensus 94 dv~v~~~-g-D~A~v~~~~~~~~~~~~~~g~~~~g~~~~~~~raT~Vfrr~~-ggWriv~hH~Sp 155 (170)
T 3cnx_A 94 DVHVSVT-G-DTALVTCTENILSGGPPPDDSDELGPLVGQLVVATNVFRRTP-DGWKLWSHHASP 155 (170)
T ss_dssp EEEEEEE-T-TEEEEEEEEEEEEEC---------CCCEEEEEEEEEEEECCT-TCCEEEEEEEEE
T ss_pred EEEEEEe-C-CEEEEEEEEEEeccCCccccccccCccccceEEEEEEEEEEC-CEEEEEEEecCC
Confidence 6665544 3 33444444455532110 122 255788888877 889999876543
No 38
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=96.89 E-value=0.0012 Score=43.71 Aligned_cols=59 Identities=19% Similarity=0.331 Sum_probs=45.2
Q ss_pred HHHHHHHHhhcc---C---hhhhhccccCCCEEEEcCcccccHHHHHHHHhcC--CCceeeEEeeEe
Q 033259 9 AFVEHYYTTFDA---N---RTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSL--PFQQCQHSITTV 67 (123)
Q Consensus 9 ~Fv~~YY~~l~~---~---r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~l--p~~~~~~~i~s~ 67 (123)
.-|.+||.+.|. + .+.|..||.|++.+..++....|+++|.+.+..+ ++..++|.+...
T Consensus 6 ~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~Dav~~~~~~~~~G~~ai~~F~~~~~~a~~~~~~~~~~~ 72 (131)
T 3er7_A 6 TTLDRYFDLFDASRTDEKAFDDLISLFSDEITFVLNGQEQHGIDAWKQFVRMVFTANQDIKHMYAGW 72 (131)
T ss_dssp CHHHHHHHHHHHTTTCHHHHHHHHHTEEEEEEEEETTEEEESHHHHHHHHHHHHHHEEEEEEEECCC
T ss_pred HHHHHHHHHHhhccCCccCHHHHHHHhCCCeEecCCCCCcCChHHHHHHHHHHHhhCcCceEEEEEE
Confidence 357899999983 2 5788899999999966677899999999988764 122667766653
No 39
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=96.80 E-value=0.0091 Score=37.13 Aligned_cols=53 Identities=15% Similarity=0.265 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhcCC
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~lp 56 (123)
.+..++.++.||..++. +.+.+..+|++++.+... +.+..|+++|.+.+..+.
T Consensus 4 ~~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~ 59 (125)
T 1ohp_A 4 PEHMTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSL 59 (125)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhc
Confidence 34467889999999986 789999999999988764 458999999999887654
No 40
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=96.68 E-value=0.003 Score=40.33 Aligned_cols=63 Identities=13% Similarity=0.336 Sum_probs=48.9
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc---------CcccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE---------GQKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~---------g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
|+.+ -.+.+++.||..++. +.+.|..+|++++.+.-. +....|+++|.+.+.. .| ..++++..
T Consensus 5 m~~~-~~~~~~~~~~~a~n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~--~~~~~~~~ 81 (122)
T 3h3h_A 5 ITQA-FAQQFSREWIDAWNAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIP--DLHFEWIA 81 (122)
T ss_dssp CCHH-HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCT--TCCCEEEE
T ss_pred CCHH-HHHHHHHHHHHHHhccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCC--CcEEEEEE
Confidence 4443 357899999999986 789999999999998754 3678999999987754 56 55566554
No 41
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=96.51 E-value=0.02 Score=38.03 Aligned_cols=50 Identities=22% Similarity=0.454 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEE-cCcccccHHHHHHHHhcCC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF-EGQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~-~g~~~~G~~~I~~~l~~lp 56 (123)
+++.|+.||..+++ +.+.+..+|++++.+.. .|....|+++|.+.+..++
T Consensus 22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D~v~~~p~g~~~~G~e~i~~~~~~~~ 73 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDMPAFLALLSEDVIHDINQGERQMGKARFAAFMEKMN 73 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCcCCHHHHHHHHHHHH
Confidence 56789999999986 78999999999999754 3568999999999988765
No 42
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=96.50 E-value=0.017 Score=43.51 Aligned_cols=108 Identities=21% Similarity=0.237 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc-CcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEEEEE
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE-GQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVS 83 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~-g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI~V~ 83 (123)
|.+.=|.+|+..|+. +-+.+..||.+++.+.=. +.++.|+++|...+..-- ...+.....--+.|. .+++.-+.|+
T Consensus 193 i~~~tVl~Y~e~lNa~Df~a~aaLFA~Dg~LepPf~~PIvGreAI~~y~~~ea-q~~~l~P~~g~~ep~-e~g~~qi~vt 270 (323)
T 3mg1_A 193 VTNATVLNYMDNLNANDFDTLIELFTSDGALQPPFQRPIVGKENVLRFFREEC-QNLKLIPERGVTEPA-EDGFTQIKVT 270 (323)
T ss_dssp BCCHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHC-TTCEEEEEEEEEEEC-GGGCEEEEEE
T ss_pred cchHHHHHHHHHhcccCHHHHHHHccCCCeeCCCCCCCccCHHHHHHHHHHHh-ccCEEeeccCccccc-cCCCceEEEE
Confidence 345568999999996 789999999999998733 389999999999996532 234555555455566 5678899999
Q ss_pred EEEEECCCCc--ceeeEEEEEeeeCCCCcEEEEce
Q 033259 84 GNLQLAGEQH--ALKFSQMFHLMPTPQGSFYVLND 116 (123)
Q Consensus 84 G~~~~~~~~~--~~~F~qtFvL~~~~~~~y~I~nD 116 (123)
|.++..=.+. ...-.-.|.|-+++ .=+++.=|
T Consensus 271 GkVqTpwfGv~v~mnVaW~F~lN~~g-kI~~v~i~ 304 (323)
T 3mg1_A 271 GKVQTPWFGGNVGMNIAWRFLLNPEG-KIFFVAID 304 (323)
T ss_dssp EEEECTTTGGGCCEEEEEEEEECTTS-CEEEEEEE
T ss_pred EEEEcccCCccccccceeEEEECCCC-cEEEEEeh
Confidence 9998764432 34566778887765 44554433
No 43
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=96.49 E-value=0.065 Score=35.47 Aligned_cols=47 Identities=15% Similarity=0.279 Sum_probs=39.8
Q ss_pred HHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhcC
Q 033259 9 AFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTSL 55 (123)
Q Consensus 9 ~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~l 55 (123)
+.|+.|+..+++ +.+.+..+|.+++.+.-. |.+..|+++|.+.+..+
T Consensus 29 eiv~~y~~A~n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~ 78 (158)
T 4h3u_A 29 EIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKART 78 (158)
T ss_dssp HHHHHHHHHHHSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhh
Confidence 578899999986 899999999999988643 45789999999988764
No 44
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=96.43 E-value=0.088 Score=33.95 Aligned_cols=110 Identities=10% Similarity=0.077 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhc-cChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEEEEEEEE
Q 033259 8 KAFVEHYYTTFD-ANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNL 86 (123)
Q Consensus 8 ~~Fv~~YY~~l~-~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI~V~G~~ 86 (123)
.+..+.|+..+. .+.+.|..+++|+..+.+.+-...++++..+.+.+-+......++.....+.. .++.-++ +|.+
T Consensus 17 ~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~G~~~~~~~~l~~~~~g~~~~~~~~~~~~~v~~~-g~d~Avv--~~~~ 93 (134)
T 3fsd_A 17 AFYEERLRAAMLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRAGLLKLSRLDLSDAVVRAA-GEDGRVV--VVRA 93 (134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHTTCEEEEEEEEEEEEEEES-STTEEEE--EEEE
T ss_pred HHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCcCccHHHHHHHHHcCCceEEEEEEeccEEEEe-CCCEEEE--EEEE
Confidence 455677777776 48999999999998877654444556666666654221223445666667766 3433333 3333
Q ss_pred EE----CCCCcceeeEEEEEeeeCCCCc--EEEEceeEEee
Q 033259 87 QL----AGEQHALKFSQMFHLMPTPQGS--FYVLNDIFRLN 121 (123)
Q Consensus 87 ~~----~~~~~~~~F~qtFvL~~~~~~~--y~I~nD~fr~~ 121 (123)
.. ++.+....+-+|-+..+.+ ++ |.|+.....-+
T Consensus 94 ~~~~~~~g~~~~~~~~~t~vw~k~~-g~~gWriv~~h~S~i 133 (134)
T 3fsd_A 94 VTAGVYDGEAFTETLRFTRIWRRTQ-GPAGWKLVAGHCSVI 133 (134)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEET-TTTEEEEEEEEEEEC
T ss_pred EEEEEeCCcEEEEEEEEEEEEEECC-CCccceEeEeEEEec
Confidence 33 2322112333444455655 77 99987765443
No 45
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=96.36 E-value=0.02 Score=40.13 Aligned_cols=80 Identities=19% Similarity=0.182 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhccChhhhhccccCCCEEEEc----Cc--ccccHHHHHHHHhcCC--CceeeEEeeEeeeeeeCCC-C
Q 033259 6 VAKAFVEHYYTTFDANRTGLANLYQEGSMLTFE----GQ--KIQGSQNIVAKLTSLP--FQQCQHSITTVDCQPSGPA-G 76 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~~----g~--~~~G~~~I~~~l~~lp--~~~~~~~i~s~d~q~~~~~-~ 76 (123)
--..=|++|+..+.++++.+..+|.+++.+.+. |. ...|+++|.+.+..++ +.. ..+..+..+.+ .+ +
T Consensus 42 ~nr~vV~~yl~~~~~D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~d--~~~~~~~v~~t-aDpd 118 (185)
T 3jum_A 42 HNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPD--WVWTDIQIFET-QDPN 118 (185)
T ss_dssp HHHHHHHHHHHCCGGGGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHSTT--CEEEEEEEECC-SSTT
T ss_pred HHHHHHHHHHHHhccCHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCCC--CeeeEEEEEEe-cCCC
Confidence 345668899999999999999999999998873 22 4789999999876543 112 34555566555 33 3
Q ss_pred cEEEEEEEEEEE
Q 033259 77 GMLVFVSGNLQL 88 (123)
Q Consensus 77 ~ilI~V~G~~~~ 88 (123)
.+++-..|.-+.
T Consensus 119 ~VvvE~~~~Gtv 130 (185)
T 3jum_A 119 WFWVECRGEGAI 130 (185)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEE
Confidence 455555555433
No 46
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=96.35 E-value=0.033 Score=35.84 Aligned_cols=102 Identities=17% Similarity=0.335 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEE--cCccc-ccHHHHHHHHhcCCCc---eeeEEeeEeeeeeeCCCCcEE
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF--EGQKI-QGSQNIVAKLTSLPFQ---QCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~--~g~~~-~G~~~I~~~l~~lp~~---~~~~~i~s~d~q~~~~~~~il 79 (123)
-.+-+..|+.-+++ +.+.|.+-|+|++.+.. +|... ...++..+ +..-|.. .-...|.++|. . . +.-.
T Consensus 11 I~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~~~~~i~~I~i--~-g-d~A~ 85 (120)
T 3fka_A 11 LTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETDPFWAISSVSV--Q-G-DIAM 85 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCCCCEEEEEEEE--E-T-TEEE
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCCceEEEEEEEE--E-C-CEEE
Confidence 44558999999997 78999999999998743 34322 23345555 5432311 11334556555 2 1 2223
Q ss_pred EEEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEe
Q 033259 80 VFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 80 I~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~ 120 (123)
+.|. +... +..|...|.|.+.+ |+|.|+|=+|++
T Consensus 86 a~v~--~~~~----~~~f~D~~~L~k~d-g~WkIv~K~~~~ 119 (120)
T 3fka_A 86 LHVE--NDWA----GMRFDDFLTVLLHE-GSWRIVSKVYRI 119 (120)
T ss_dssp EEEE--EEET----TEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred EEEE--EEcC----CCceEEEEEEEEeC-CEEEEEEEEEEc
Confidence 3333 2221 57899999999998 999999999976
No 47
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=96.26 E-value=0.017 Score=36.52 Aligned_cols=52 Identities=13% Similarity=0.232 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC--cccccHHHHHHHHhcC
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG--QKIQGSQNIVAKLTSL 55 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g--~~~~G~~~I~~~l~~l 55 (123)
.+..+..+..||..+++ +.+.+..+|.+++.+...+ ....|+++|.+.+..+
T Consensus 6 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~ 60 (131)
T 1oh0_A 6 AQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQG 60 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHH
Confidence 34567889999999997 7899999999999887653 4889999999887654
No 48
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=96.26 E-value=0.12 Score=33.99 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-cccccHHHHHHHHhcC--CCceeeEEeeEeeeeeeCCCCcEEEE
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-QKIQGSQNIVAKLTSL--PFQQCQHSITTVDCQPSGPAGGMLVF 81 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l~~l--p~~~~~~~i~s~d~q~~~~~~~ilI~ 81 (123)
.-++++..|...+|. +.+.+..+|.+++.+.+.+ ....|+++|.+.+..+ ++..+.|.+..+..... .++.....
T Consensus 12 ~I~~l~~ry~~~~D~~d~~~~~~lFt~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~H~~~n~~I~~~-gdd~A~~~ 90 (150)
T 3ef8_A 12 AIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGTFFRGTSHHNSNICIDFV-SETEANVR 90 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHTTTHHHHEEEEEEEEEEEEEEEE-ETTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhccCceEEEccCCCCCCCHHHHHHHHHHhhcccCceEEecCCEEEEEc-CCCEEEEE
Confidence 346789999999997 6799999999999988754 3578999999988765 23478898888666554 22222222
Q ss_pred EEEEE--EECCCCcc----eeeEEEEEeeeCCCCcEEEEceeEEe
Q 033259 82 VSGNL--QLAGEQHA----LKFSQMFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 82 V~G~~--~~~~~~~~----~~F~qtFvL~~~~~~~y~I~nD~fr~ 120 (123)
..-.+ ...+.+.. -.+.. .+.+.+ ++|.|..-.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gry~d--~~~r~d-g~Wri~~r~~~~ 132 (150)
T 3ef8_A 91 SVVLAIHRYTKERPDGILYGQYFD--TVVKVD-GQWKFKRRELRT 132 (150)
T ss_dssp EEEEEEEEESSSSCCEEEEEEEEE--EEEEET-TEEEEEEEEEEE
T ss_pred EEEEEEEEccCCCCeEEEEEEEEE--EEEEEC-CEEEEEEEEEEe
Confidence 11111 11222211 11222 344555 899998766543
No 49
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=96.19 E-value=0.12 Score=33.11 Aligned_cols=107 Identities=11% Similarity=0.259 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEE---cCc-ccccHHHHHHHHhcC--CCceeeEEeeEeeeeeeCCCCc
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF---EGQ-KIQGSQNIVAKLTSL--PFQQCQHSITTVDCQPSGPAGG 77 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~---~g~-~~~G~~~I~~~l~~l--p~~~~~~~i~s~d~q~~~~~~~ 77 (123)
+.-++-+..|...++. +.+.|...|+|++.+.. +|. .....++..+.+.+- |.....+.|.+++. . .+ .
T Consensus 12 ~aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~i--~-gd-~ 87 (128)
T 3blz_A 12 HAIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDNVFHPSPEAKAAIARIDI--V-GT-A 87 (128)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHHHTCCCCTTCEEEEEEEEE--E-TT-E
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEecCHHHHHHHHHhcCCCCccccCeEEEEEE--E-CC-E
Confidence 4456778999999997 78889999999998854 222 222345555554333 32245666655444 2 22 2
Q ss_pred EEEEEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEEee
Q 033259 78 MLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 121 (123)
Q Consensus 78 ilI~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~~ 121 (123)
-...+... ... ...|...|.|.+.+ |+|.|.+-.|+..
T Consensus 88 A~a~~~~~-~~~----~~~~~d~~~l~k~d-g~WkI~~~~~~~~ 125 (128)
T 3blz_A 88 ASARIDTD-DIS----GFRFTDFFNLLKVE-GKWTVVSKIYHTH 125 (128)
T ss_dssp EEEEEEEE-EET----TEEEEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred EEEEEEEE-EcC----CCceEEeEEEEEEC-CEEEEEEEEEEec
Confidence 22223221 122 35688888898887 9999999988753
No 50
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=96.17 E-value=0.11 Score=33.84 Aligned_cols=51 Identities=14% Similarity=0.215 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-cccccHHHHHHHHhcCC
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-QKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l~~lp 56 (123)
-.++.++.||..++. +.+.|..+|+++..+.-.| .+..|+++|.+.+..+.
T Consensus 16 ~~~~~v~~f~~a~~~gD~~~l~~l~a~D~v~~~~~~~~~~G~~~i~~~~~~~~ 68 (149)
T 2bng_A 16 EAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQ 68 (149)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEeCCCCCccCHHHHHHHHHHHH
Confidence 456789999999986 7799999999998877544 46799999999998876
No 51
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=96.03 E-value=0.15 Score=32.93 Aligned_cols=108 Identities=11% Similarity=0.031 Sum_probs=69.6
Q ss_pred HHHHHHHHHHhhcc--ChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCC--CceeeEEeeEeeeeeeCCCCcEEEEE
Q 033259 7 AKAFVEHYYTTFDA--NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLP--FQQCQHSITTVDCQPSGPAGGMLVFV 82 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~--~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp--~~~~~~~i~s~d~q~~~~~~~ilI~V 82 (123)
...+++.++..... +-+.|...|+|+..|...+-...|.+++.+.+.+.- +..-+.+|..+..... .+++.++.-
T Consensus 12 ~~~~ie~W~~~~~~~~dl~~l~a~~a~d~~mv~p~G~~~g~~~~~~~~~~~~g~~pgl~i~i~~l~~~~~-~~d~~vv~y 90 (128)
T 1tp6_A 12 AHVAIRDWLAGDSRADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPGLRIEIDGESLLAS-GVDGATLAY 90 (128)
T ss_dssp HHHHHHHHHHTCCCTTHHHHHHTTEEEEEEEECTTSCEEEHHHHHHHHHHHTTCSTTCEEEEEEEEEEEE-ETTEEEEEE
T ss_pred HHHHHHHHHcCCCcHhHHHHHHHhcCCCEEEECCCCeECCHHHHHHHHHHhhCCCCCeEEEEEEEEEEee-cCCEEEEEE
Confidence 45667777776655 456788999999999876667899999998886532 1155666666665444 356666665
Q ss_pred EEEEEECCCCcceeeEEEEEeeeCCCC--cEEEEcee
Q 033259 83 SGNLQLAGEQHALKFSQMFHLMPTPQG--SFYVLNDI 117 (123)
Q Consensus 83 ~G~~~~~~~~~~~~F~qtFvL~~~~~~--~y~I~nD~ 117 (123)
.+.=..++.. ..+.+ |.++.+..+| .|.++-+.
T Consensus 91 ~~~~~~~~~~-~~rrs-T~v~~~~~~g~~~W~~lHET 125 (128)
T 1tp6_A 91 REIQSDAAGR-SERLS-TVVLHRDDEGRLYWRHLQET 125 (128)
T ss_dssp EEEEEETTEE-EEEEE-EEEEEECTTCCEEEEEEEEE
T ss_pred EEEeccCCce-eEEEE-EEEEEeCCCCCEEEEEEEEE
Confidence 4333333333 44566 8888666446 48776554
No 52
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=95.95 E-value=0.086 Score=35.02 Aligned_cols=111 Identities=10% Similarity=0.027 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEE-EE--cCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEEE-
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSML-TF--EGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVF- 81 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~-~~--~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI~- 81 (123)
-.+.++++...+.. +.+.+.++|+|+..+ .+ .|+.+.|.+.+...+...+.+....++.....+.. .++.-++.
T Consensus 14 I~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f~~~~~~~~~~~~~~~~V~~~-g~d~Av~~y 92 (143)
T 2f86_B 14 IVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGNRKNQVHTTMLNPNVHII-GEDAACVAY 92 (143)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSCSCCSCEEEEEEEEEEEE-TTTEEEEEE
T ss_pred HHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHHhcccCCcceeEEEcceEEEe-CCCEEEEEE
Confidence 35778889998875 789999999998765 34 47789999998866554332245566667777776 32332222
Q ss_pred --EEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEceeEE
Q 033259 82 --VSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 82 --V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD~fr 119 (123)
.++....++.+....+-.|.++++.+ |+|.|+-.-..
T Consensus 93 ~~~~~~~~~~G~~~~~~~r~T~V~~k~~-g~WkivH~H~S 131 (143)
T 2f86_B 93 VKLTQFLDRNGEAHTRQSQESRVWSKKQ-GRWVCVHVHRS 131 (143)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred EeeeeeccCCCCeeeEEEEEEEEEEEeC-CcEEEEEEeEC
Confidence 22222223433334577888898887 99999876544
No 53
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=95.93 E-value=0.18 Score=32.79 Aligned_cols=109 Identities=7% Similarity=0.051 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhc----CCCceeeEEeeEeeeeeeCCCCcEE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTS----LPFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~s~d~q~~~~~~~il 79 (123)
..-++|+..|...+|. +.+.+..+|.+++.+.....+..|+++|.+.+.. .| ..+.|.+..+-.... ++.
T Consensus 10 ~~I~~l~~rya~~lD~~d~~~~~~lft~Da~~~~~~g~~~g~~~i~~~~~~~~~~~~-~~t~H~i~n~~i~~~--~d~-- 84 (144)
T 2rgq_A 10 LEIMELAARFEMSLDKEDVENYLATFASDGALQGFWGIAKGKEELRQGFYAMLDTFA-RGKRHCSSNAIIQGN--YDE-- 84 (144)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHTT-TTEEEEEEEEEEEEC--SSE--
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHhhccCcEEEEcCCCCCCCHHHHHHHHHHHHhhCC-CCcEEecCCeEEEEe--CCE--
Confidence 4567899999999997 6789999999999987652245899999887753 23 258898888766433 222
Q ss_pred EEEEEEEE--ECCCCcceeeE-EEEEeeeCCCCcEEEEceeEE
Q 033259 80 VFVSGNLQ--LAGEQHALKFS-QMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 80 I~V~G~~~--~~~~~~~~~F~-qtFvL~~~~~~~y~I~nD~fr 119 (123)
..+.+.+. ........... -+..+.+.+ |+|.|..-...
T Consensus 85 a~~~~~~~~~~~~~~~~~~~g~y~d~~~r~d-g~Wri~~r~~~ 126 (144)
T 2rgq_A 85 ATMESYLTVVNREDLNRAGSAFVKDQVRKIN-GKWYLILRQIE 126 (144)
T ss_dssp EEEEEEEEEEESSSSCEEEEEEEEEEEEEET-TEEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCeEEEEEEEEEEEEEEC-CEEEEEEEEEE
Confidence 22223222 21111111111 223455655 88999876553
No 54
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=95.92 E-value=0.18 Score=32.65 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-cccccHHHHHHHHhcCC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-QKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l~~lp 56 (123)
.++.++.||..+++ +.+.+..+|++++.+...| ....|+++|.+.+..+.
T Consensus 24 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~~~~~~~~G~~~i~~~~~~~~ 75 (149)
T 1nww_A 24 DEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLF 75 (149)
T ss_dssp HHHHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHhCCCEEEEcCCCCCccCHHHHHHHHHHHH
Confidence 46788999999987 7899999999999987765 46889999999888765
No 55
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=95.92 E-value=0.18 Score=32.76 Aligned_cols=108 Identities=9% Similarity=0.041 Sum_probs=64.6
Q ss_pred HHHHHHHHHhhcc-ChhhhhccccCCCE-EEE-cCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEEEEEE
Q 033259 8 KAFVEHYYTTFDA-NRTGLANLYQEGSM-LTF-EGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSG 84 (123)
Q Consensus 8 ~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~-~~~-~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI~V~G 84 (123)
.+....|+..++. +.+.|..+|.+++. +.. .|....|.++|......++-....+.+.....+.. .++ ..+.+ .
T Consensus 14 ~~~~~~y~~Al~~~D~~~L~~lf~~d~~~v~~~~g~~l~G~~~I~a~r~~~~~~~~~~~~~~~~i~~~-g~d-~A~~~-~ 90 (129)
T 2owp_A 14 QAAFVEYERALVENDIEAMNALFWHTPETVRYGIAEVQHGGEAIRAWRERCEPVPKSRKLHRTVVTTF-GTD-FATVS-T 90 (129)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTBCCSTTCEEECSSCEEESHHHHHHHHHHSCCCCTTCEEEEEEEEEE-TTT-EEEEE-E
T ss_pred HHHHHHHHHHHHhCCHHHHHhhccCCCcEEEeCCCCccCCHHHHHHHHHhcCCCCCceeecccEEEEe-cCC-EEEEE-E
Confidence 3455677888875 78999999999985 434 35688999999997666652223445555555555 222 22222 2
Q ss_pred EEEECCCCcceeeEEEEEeeeCC-CCcEEEEceeEEe
Q 033259 85 NLQLAGEQHALKFSQMFHLMPTP-QGSFYVLNDIFRL 120 (123)
Q Consensus 85 ~~~~~~~~~~~~F~qtFvL~~~~-~~~y~I~nD~fr~ 120 (123)
.+...+.+ ...-+|.+..+.+ +++|.|+..-...
T Consensus 91 ~~~~~~~~--~~gr~t~vw~r~~~~~gWrIv~~H~S~ 125 (129)
T 2owp_A 91 EFTSDATP--LLGRQMQTWARLSPADGWKIVAAHVSL 125 (129)
T ss_dssp EEEETTEE--EEEEEEEEEEECSTTTCEEEEEEEEEE
T ss_pred EEEECCCC--cceEEEEEEEECCCCCCEEEEEeeecC
Confidence 44444332 2233444444532 1789998876554
No 56
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=95.87 E-value=0.02 Score=37.07 Aligned_cols=55 Identities=15% Similarity=0.294 Sum_probs=45.8
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC--cccccHHHHHHHHhcCC
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG--QKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g--~~~~G~~~I~~~l~~lp 56 (123)
|+.+ -.++-|+.||..+.+ +.+.|..||++++.+.+.. ....|+++|.+.+...|
T Consensus 2 Ms~~-~~~~~v~~~~~a~~~~D~~~l~~llaeD~v~~~P~~~~~~~Gr~~~~~~~~~~~ 59 (128)
T 3en8_A 2 MREE-KIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHP 59 (128)
T ss_dssp CHHH-HHHHHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTT
T ss_pred CCHH-HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCEEECHHHHHHHHHHCC
Confidence 4433 356789999999986 7899999999999998863 46899999999998888
No 57
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=95.84 E-value=0.17 Score=32.29 Aligned_cols=50 Identities=18% Similarity=0.376 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc-CcccccHHHHHHHHhcCC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE-GQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~-g~~~~G~~~I~~~l~~lp 56 (123)
.++.++.||..++. +.+.+..+|++++.+..+ |....|+++|.+.+..++
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~~~~~~G~~~~~~~~~~~~ 61 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDVAHDLNQGPREIGRAAFASFLQRMN 61 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcEEEEcCCCCceEcHHHHHHHHHHHh
Confidence 45788999999985 789999999999876554 568999999999998876
No 58
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=95.82 E-value=0.085 Score=34.32 Aligned_cols=53 Identities=13% Similarity=0.073 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc----ccccHHHHHHHHhcCC
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ----KIQGSQNIVAKLTSLP 56 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~----~~~G~~~I~~~l~~lp 56 (123)
-+++++.++.|+..+.. +.+.|..++.+++.+.++|. ...|+++|.+.+..+.
T Consensus 11 ~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~ 68 (134)
T 3dmc_A 11 LKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVS 68 (134)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHH
Confidence 36788899999999975 78999999999999999886 5889999988776543
No 59
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=95.82 E-value=0.14 Score=33.83 Aligned_cols=100 Identities=9% Similarity=0.134 Sum_probs=64.8
Q ss_pred Hhhc-cChhhhhccccCCCEEEE--cCcccccHHHHHHHHhcCCCc-eeeEEeeEeeeeeeCCCCcEEE-EEEEEEEECC
Q 033259 16 TTFD-ANRTGLANLYQEGSMLTF--EGQKIQGSQNIVAKLTSLPFQ-QCQHSITTVDCQPSGPAGGMLV-FVSGNLQLAG 90 (123)
Q Consensus 16 ~~l~-~~r~~l~~~Y~~~s~~~~--~g~~~~G~~~I~~~l~~lp~~-~~~~~i~s~d~q~~~~~~~ilI-~V~G~~~~~~ 90 (123)
..|+ .+++.+..+|+|++.+-= .++.+.|.+++...+..++-. .+..++.....+.. .+.+++- .+. ...++
T Consensus 25 ~~L~~gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~~~~~~~~~~ei~~p~V~v~-gD~A~~~y~l~--~~~~~ 101 (134)
T 3ke7_A 25 EALASTDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQLPPADHFDMIRPVVQVA-QNIAVLTFNLD--SYLSD 101 (134)
T ss_dssp HHHHCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCCCCSEEEEEEEEEEEE-TTEEEEEEEEE--EEETT
T ss_pred HHHhCCCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHhcccCCcceEEEeCCeEEEe-CceEEEEEEEE--EeeCC
Confidence 3344 488999999999987521 245689999999999875421 24566766665554 3333321 111 11222
Q ss_pred CCcceeeEEEEEeeeCCCCcEEEEceeEEe
Q 033259 91 EQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 91 ~~~~~~F~qtFvL~~~~~~~y~I~nD~fr~ 120 (123)
. ....-.|.+.++.++|+|.|+..-..+
T Consensus 102 -~-~~~~r~T~V~~r~~dG~W~ivH~H~S~ 129 (134)
T 3ke7_A 102 -K-VIKWNCTEVYRRNPDNQWKIIQTHWSY 129 (134)
T ss_dssp -E-EEEEEEEEEEEECTTSBEEEEEEEEEE
T ss_pred -C-cEEEEEEEEEEEcCCCcEEEEEEeecc
Confidence 2 456788999999844999999877665
No 60
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=95.58 E-value=0.26 Score=32.74 Aligned_cols=50 Identities=22% Similarity=0.462 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc------ccccHHHHHHHHhcCC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ------KIQGSQNIVAKLTSLP 56 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~------~~~G~~~I~~~l~~lp 56 (123)
.++.++.||..++. +.+.|..+|.+++.+...+. ...|+++|.+.+..+.
T Consensus 25 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~ 81 (163)
T 1z1s_A 25 AKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFP 81 (163)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHH
Confidence 35678899999986 77999999999999876522 4789999999988765
No 61
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=95.53 E-value=0.02 Score=36.64 Aligned_cols=55 Identities=16% Similarity=0.320 Sum_probs=43.7
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc-----ccccHHHHHHHHhcCC
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ-----KIQGSQNIVAKLTSLP 56 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~-----~~~G~~~I~~~l~~lp 56 (123)
|+. +-..+.++.||..+++ +.+.+..+|+++..+...+. ...|+++|.+.+..+.
T Consensus 2 Ms~-~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~ 62 (135)
T 3fgy_A 2 MST-QENVQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKAS 62 (135)
T ss_dssp CCC-HHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHH
T ss_pred CCc-chHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHH
Confidence 554 3456788999999986 78999999999998877653 4689999998887654
No 62
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=95.48 E-value=0.032 Score=35.04 Aligned_cols=90 Identities=7% Similarity=0.166 Sum_probs=59.9
Q ss_pred HHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc-ccccHHHHHHHHhcCCCc--eeeEEeeEeeeeeeCCCCcEEEEEEE
Q 033259 9 AFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ-KIQGSQNIVAKLTSLPFQ--QCQHSITTVDCQPSGPAGGMLVFVSG 84 (123)
Q Consensus 9 ~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~-~~~G~~~I~~~l~~lp~~--~~~~~i~s~d~q~~~~~~~ilI~V~G 84 (123)
+.|+.||..+++ +.+.+..+.+++......|. ...|++++.+.+..+... ...+++..+ -. .++ .+.|.|
T Consensus 4 ~~v~~~~~a~~~gD~~~~~~~ladDv~w~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~---i~-~Gd--~Vvv~~ 77 (112)
T 3f14_A 4 TTHYSIAQHFSSGDFPAVYACFNDIIEWNIIGNQVVKGKADVIDFCNKMLPEMKGAVLTNDNV---IQ-NEN--QIVIEG 77 (112)
T ss_dssp HHHHHHHHHHHTTCGGGTGGGEEEEEEEEETTTEEEESHHHHHHHHHHHHHHHHTSEEEEEEE---EE-CSS--EEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHhcCCceEEEEcCCccEecHHHHHHHHHHHHhhcCCcEEEEEEE---EE-eCC--EEEEEE
Confidence 568999999986 67889999999877655554 689999999888765411 245555552 11 122 455666
Q ss_pred EEEE---CCCCcceeeEEEEEee
Q 033259 85 NLQL---AGEQHALKFSQMFHLM 104 (123)
Q Consensus 85 ~~~~---~~~~~~~~F~qtFvL~ 104 (123)
.+.. ++.+....|+..|-+.
T Consensus 78 ~~~~~~~~g~~~~~~~~~vf~~~ 100 (112)
T 3f14_A 78 KCRYFDAEGKEAFVSYCDIYRFE 100 (112)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEEEEEEEe
Confidence 6653 2333246788888774
No 63
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=95.47 E-value=0.23 Score=31.89 Aligned_cols=51 Identities=18% Similarity=0.384 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc----Cc--ccccHHHHHHHHhcCC
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE----GQ--KIQGSQNIVAKLTSLP 56 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~----g~--~~~G~~~I~~~l~~lp 56 (123)
-.++.++.||..++. +.+.+..+|++++.+... |. ...|+++|.+.+..+.
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~ 68 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYP 68 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhh
Confidence 356788999999986 789999999999998774 33 4799999999887764
No 64
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=95.41 E-value=0.053 Score=34.90 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-----cccccHHHHH-HHHhcC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-----QKIQGSQNIV-AKLTSL 55 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-----~~~~G~~~I~-~~l~~l 55 (123)
..+.|+.||..++. +.+.+..+|+++..+...+ ....|+++|. +.+..+
T Consensus 14 ~~~~v~~~~~a~~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~ 69 (140)
T 3ec9_A 14 PYQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRL 69 (140)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHH
Confidence 35788999999986 6899999999999987664 2578999996 556654
No 65
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.31 E-value=0.039 Score=35.30 Aligned_cols=59 Identities=15% Similarity=0.306 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc-----CcccccHHHHHHHHhc---CCCceeeEEeeE
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE-----GQKIQGSQNIVAKLTS---LPFQQCQHSITT 66 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~-----g~~~~G~~~I~~~l~~---lp~~~~~~~i~s 66 (123)
-.++.++.||..++. +.+.|..+|+++..+... |.++.|+++|.+.+.. .| ...+.+..
T Consensus 18 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~~~~~~--~~~~~i~~ 85 (129)
T 3fh1_A 18 QTAEIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSAIATQP--GTRFDLEE 85 (129)
T ss_dssp HHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHHHHHCT--TCEEEEEE
T ss_pred hHHHHHHHHHHHHHccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHHHhcCC--CceEEEeE
Confidence 356889999999986 789999999999998764 4567999999988764 44 44455543
No 66
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=95.25 E-value=0.012 Score=39.14 Aligned_cols=54 Identities=13% Similarity=0.188 Sum_probs=45.1
Q ss_pred ChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC--cccccHHHHHHHHhcC
Q 033259 2 DPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG--QKIQGSQNIVAKLTSL 55 (123)
Q Consensus 2 ~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g--~~~~G~~~I~~~l~~l 55 (123)
+.....+..+..||..+++ +.+.|..+|.+++.+.-.. .++.|+++|...+..+
T Consensus 6 ~~~~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~ 62 (143)
T 3mso_A 6 PLEANAAATLAEWHGLIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTV 62 (143)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHH
Confidence 3445678899999999986 7899999999999998543 7899999999988764
No 67
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=95.13 E-value=0.048 Score=36.38 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEE--cCcccccHHHHHHHHhcCC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF--EGQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~--~g~~~~G~~~I~~~l~~lp 56 (123)
..++...|-..+.. +++.|.+||.++|.+.= .|....|...|.+.|.+-.
T Consensus 22 EqqlA~~Yi~AlT~hDy~~L~~FynrdsVf~D~ta~~~YtG~r~Ii~Fl~RaH 74 (154)
T 3gzb_A 22 EQQLAVKYMDALTEHDYKTLITFYNRDSIFFDKTANRKYTGGRFIIDFLERAH 74 (154)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTCCTTCEEEETTTTEEEESHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCHHHHHHHhCccceeeeeccCcceeCcHHHHHHHHHHh
Confidence 45777888899977 89999999999999974 5789999999999998643
No 68
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=95.07 E-value=0.028 Score=35.93 Aligned_cols=62 Identities=15% Similarity=0.244 Sum_probs=47.0
Q ss_pred HHHHHHHHHhhcc-Ch----hhhhccccCCCEEEEcCcccccHHHHHHHHhc----CCCceeeEEee-Eeeeee
Q 033259 8 KAFVEHYYTTFDA-NR----TGLANLYQEGSMLTFEGQKIQGSQNIVAKLTS----LPFQQCQHSIT-TVDCQP 71 (123)
Q Consensus 8 ~~Fv~~YY~~l~~-~r----~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~-s~d~q~ 71 (123)
+..+++|...+++ ++ ..|..+|++++.+.-....+.|+++|...+.. .| ..++.+. .++.++
T Consensus 6 ~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D~~~~dP~~~~~G~~ai~~~~~~~~~~~~--~~~f~~~~~~~~~~ 77 (121)
T 3dxo_A 6 LTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFP--GYRFVLAGTPDGHG 77 (121)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHST--TCEEEEEEEEEEET
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhcCCCeEEECCCCCcCCHHHHHHHHHHHHHHCC--CcEEEEccCcceeC
Confidence 5677788887775 33 46999999999998877789999999987654 55 6777776 555543
No 69
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=94.74 E-value=0.14 Score=33.58 Aligned_cols=49 Identities=12% Similarity=0.233 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc-----ccccHHHHHHHHhcC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ-----KIQGSQNIVAKLTSL 55 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~-----~~~G~~~I~~~l~~l 55 (123)
..+.++.||..++. +.+.|..+|+++..+...|. ...|+++|.+.+..+
T Consensus 22 n~~~v~~~~~a~~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~ 76 (148)
T 3g8z_A 22 TIDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKM 76 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHH
Confidence 45678899998886 78899999999999887764 368999999877653
No 70
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=94.68 E-value=0.29 Score=30.57 Aligned_cols=49 Identities=6% Similarity=0.062 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEE-cC-cccccHHHHHHHHhcC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTF-EG-QKIQGSQNIVAKLTSL 55 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~-~g-~~~~G~~~I~~~l~~l 55 (123)
..+.++.||..++. +.+.+..+|.+++.+.. +| ....|+++|.+.+..+
T Consensus 5 ~~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~ 56 (123)
T 2k54_A 5 IELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIER 56 (123)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHH
Confidence 46789999999986 77999999999987654 34 3589999999988653
No 71
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=94.60 E-value=0.25 Score=32.21 Aligned_cols=63 Identities=11% Similarity=0.247 Sum_probs=46.0
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
|+. +-.++.++.||..++. +.+.+..+|+++..+...+....|++++.+.+.. +| ..++++..
T Consensus 1 Ms~-~~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~~~~~~~G~~~~~~~~~~~~~~~~--~~~~~i~~ 68 (152)
T 2gex_A 1 MST-TANKERCLEMVAAWNRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFP--DLRLDVRS 68 (152)
T ss_dssp -CH-HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCT--TCEEEEEE
T ss_pred CCh-hHHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEeCCCCCCCCHHHHHHHHHHHHHhCC--CcEEEEEE
Confidence 554 3356788999999876 6788999999998776534578999999887654 45 55566654
No 72
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=94.43 E-value=0.27 Score=36.08 Aligned_cols=55 Identities=20% Similarity=0.342 Sum_probs=45.6
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhcC
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTSL 55 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~l 55 (123)
|.-.+-.+..++.||..++. +.+.|..+|.+++.+... ..+..|+++|.+.+..+
T Consensus 2 m~~~~~~~~~v~~~~~~~~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~ 59 (283)
T 3rga_A 2 MPAETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPA 59 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHH
Confidence 43445577899999999986 789999999999998865 45789999999988754
No 73
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=94.40 E-value=0.06 Score=33.72 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=42.4
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
|+++ +.|+.||..++. +.+.+..+|+++...-.. +....|++++.+.+.. .| ..++++..
T Consensus 2 m~~~----~~v~~~~~a~n~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p--~~~~~i~~ 68 (117)
T 3ff2_A 2 MSNL----ETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWP--QNHAEIKD 68 (117)
T ss_dssp CCHH----HHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHHCT--TCEEEEEE
T ss_pred cCHH----HHHHHHHHHHcccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhhCC--CceEEEEE
Confidence 5554 457788888886 788999999988665332 4578999999987654 46 44555544
No 74
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=94.25 E-value=0.35 Score=33.11 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHhhccChhhhhccccCCCE---EEE-cCc--ccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEE
Q 033259 6 VAKAFVEHYYTTFDANRTGLANLYQEGSM---LTF-EGQ--KIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGML 79 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~~r~~l~~~Y~~~s~---~~~-~g~--~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~il 79 (123)
--++-|++|+..+.++++.+..||.+++. +.- .|. ...|+++|.+.+..++-.--......+..+++...+.++
T Consensus 20 ~Nr~vV~~~l~~~~~D~~~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~~~~~~~~~~~~i~~t~Dpd~vv 99 (163)
T 3ff0_A 20 KNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFW 99 (163)
T ss_dssp HHHHHHHHHHTCCGGGGGGGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHHHSTTCEEEEEEEEEBSSTTEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHhhCCCceeeeEEEEEcCCCCEEE
Confidence 34677899999888899999999999988 652 243 478999999987654300001245555666662223455
Q ss_pred EEEEEEEEE--CCCC---cceeeEEEEEe
Q 033259 80 VFVSGNLQL--AGEQ---HALKFSQMFHL 103 (123)
Q Consensus 80 I~V~G~~~~--~~~~---~~~~F~qtFvL 103 (123)
+-..|.-+. .+.+ ....|...|.+
T Consensus 100 vE~~~~g~i~~tG~~~~~y~~~yi~v~~v 128 (163)
T 3ff0_A 100 VECDGHGKILFPGYPEGYYENHFLHSFEL 128 (163)
T ss_dssp EEEEEEEEECCTTSCCEEEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCcccccEEEeEEEEEEE
Confidence 555554443 3433 22445555544
No 75
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=93.98 E-value=0.3 Score=32.15 Aligned_cols=62 Identities=15% Similarity=0.232 Sum_probs=46.4
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
|+.+ -.++.++.||..++. +.+.+..+|+++..+... ....|++++.+.+.. .| ..++++..
T Consensus 1 Ms~~-~~~~~v~~~~~a~~~~D~~~~~~~~a~D~v~~~p-~~~~G~~~~~~~~~~~~~~~~--~~~~~i~~ 67 (158)
T 2gey_A 1 MSMA-ERKALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE-DNEVSSADMVKLMEGGLKAFP--DLQLEVKS 67 (158)
T ss_dssp -CHH-HHHHHHHHHHHHHHTTCTHHHHTTEEEEEEEEET-TEEECHHHHHHHHHHHHHHST--TCEEEEEE
T ss_pred CChH-HHHHHHHHHHHHHcCCCHHHHHHHcCCCeEEeCC-CCCCCHHHHHHHHHHHHHhCC--CcEEEEEE
Confidence 5544 357788999999886 678999999999887764 477999999887654 45 55666655
No 76
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=93.93 E-value=0.39 Score=31.43 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCc-----ccccHHHHHHHHhcC
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQ-----KIQGSQNIVAKLTSL 55 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~-----~~~G~~~I~~~l~~l 55 (123)
+-..+.++.||..+++ +.+.+..+|+++..+...+. ...|+++|.+.+..+
T Consensus 29 ~~~~~~v~~~~~a~~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~ 85 (156)
T 1tuh_A 29 EQNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRY 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHH
Confidence 3457789999999986 78999999999998877654 269999998877654
No 77
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=93.83 E-value=0.061 Score=34.11 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=47.2
Q ss_pred CChHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCC
Q 033259 1 MDPDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp 56 (123)
|+-..-.++-|+.||..++. +.+.|..+++|+..+..++-...|++++...+..+.
T Consensus 2 ~~~~~~~~~~v~~f~~A~~~gD~~~l~~lla~Dvv~~~~~g~~~G~~~v~~~~~~~~ 58 (114)
T 3f40_A 2 MKTQITTRDLVLEFIHALNTENFPAAKKRLNENFTFNGPMGHREGSERYMNDMEKMK 58 (114)
T ss_dssp CCSCCCHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEETTEEEESHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCcccCHHHHHHHHHHHH
Confidence 44445567788899999986 789999999999998888878999999999998876
No 78
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=93.79 E-value=0.76 Score=29.12 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc-C-cc-------cccHHHHHHHHhcCC
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE-G-QK-------IQGSQNIVAKLTSLP 56 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~-g-~~-------~~G~~~I~~~l~~lp 56 (123)
+-....+..||..++. +.+.+..+|.+++.+... + .+ ..|+++|.+.+..+.
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~ 68 (139)
T 2a15_A 7 SPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHI 68 (139)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhc
Confidence 3456788999999986 789999999999988643 2 23 799999999987764
No 79
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=93.76 E-value=0.073 Score=34.53 Aligned_cols=65 Identities=11% Similarity=0.144 Sum_probs=47.2
Q ss_pred CChHHHHHHHHHHHHH-hhcc-ChhhhhccccCCCEEEEcC-----cccccHHHHHHHHhc----CCCceeeEEeeEe
Q 033259 1 MDPDSVAKAFVEHYYT-TFDA-NRTGLANLYQEGSMLTFEG-----QKIQGSQNIVAKLTS----LPFQQCQHSITTV 67 (123)
Q Consensus 1 ~~~~~i~~~Fv~~YY~-~l~~-~r~~l~~~Y~~~s~~~~~g-----~~~~G~~~I~~~l~~----lp~~~~~~~i~s~ 67 (123)
|+.++-.++.|+.||. .++. +.+.+..+|+++..+.++. ....|++++.+.+.. +| ..++++..+
T Consensus 2 Ms~~~~~~~~v~~~~~~~~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~p--d~~~~i~~~ 77 (146)
T 3f9s_A 2 MSISSKAKEILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFP--DQCFDIQGL 77 (146)
T ss_dssp CEECTTHHHHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHST--TCEEEEEEE
T ss_pred CChHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCC--CcEEEEEEE
Confidence 5555566788999996 7765 7899999999998854543 257899999887654 55 566666543
No 80
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=93.65 E-value=0.76 Score=33.66 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhcCC
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~lp 56 (123)
++-.++.++.||..++. +.+.|..+|.+++.+... +.+..|+++|.+.+..+.
T Consensus 137 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~ 192 (283)
T 3rga_A 137 EERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAV 192 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhh
Confidence 45678899999999986 789999999999998864 357899999999887654
No 81
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=93.13 E-value=1.1 Score=30.51 Aligned_cols=70 Identities=11% Similarity=0.243 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc---C------cccccHHHHHHHHhcC-C----CceeeEEeeEe
Q 033259 3 PDSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE---G------QKIQGSQNIVAKLTSL-P----FQQCQHSITTV 67 (123)
Q Consensus 3 ~~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~---g------~~~~G~~~I~~~l~~l-p----~~~~~~~i~s~ 67 (123)
..+.-.+++..|...+|. +.+.+..+|.+++.+.+. | ....|+++|.+.+... + +..+.|.+...
T Consensus 24 d~~~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n~ 103 (179)
T 3ejv_A 24 DETIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNAP 103 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCCC
Confidence 345567899999999997 679999999999998764 3 2678999999988653 2 34678888876
Q ss_pred eeeee
Q 033259 68 DCQPS 72 (123)
Q Consensus 68 d~q~~ 72 (123)
.....
T Consensus 104 ~I~vd 108 (179)
T 3ejv_A 104 IIVIE 108 (179)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 66444
No 82
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=92.97 E-value=0.47 Score=29.94 Aligned_cols=49 Identities=18% Similarity=0.155 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-c----ccccHHHHHH-HHhcC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-Q----KIQGSQNIVA-KLTSL 55 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~----~~~G~~~I~~-~l~~l 55 (123)
..+-|+.||..+++ +.+.+..+++++..+...+ . ...|+++|.+ .+..+
T Consensus 6 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~ 61 (134)
T 3grd_A 6 NLEIIRSTYEGSASSNAKHLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRL 61 (134)
T ss_dssp HHHHHHTTTSSCHHHHHHHHHHHEEEEEEEEECTTSTTCEEEESHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCCCeEEEecCCcccCcEEeCHHHHHHHHHHHH
Confidence 35678999999886 6789999999999887654 2 4689999974 55544
No 83
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=92.81 E-value=1.1 Score=28.01 Aligned_cols=49 Identities=16% Similarity=0.280 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC--------cccccHHHHHHHHhcCC
Q 033259 8 KAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG--------QKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 8 ~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g--------~~~~G~~~I~~~l~~lp 56 (123)
.+-++.||..+++ +.+.+..+|+++..+...+ ....|+++|.+.+..+.
T Consensus 6 ~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~ 63 (132)
T 3ebt_A 6 MQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVP 63 (132)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHH
Confidence 4568888888886 7899999999999887753 46789999999887765
No 84
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=92.58 E-value=0.75 Score=30.42 Aligned_cols=58 Identities=12% Similarity=0.176 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC-cccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG-QKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
-.+.++.||..+++ +.+.+..+|+++..+.... ....|++++.+.+.. +| ..++++..
T Consensus 36 n~~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~g~~~G~e~~~~~~~~~~~~~p--d~~~~i~~ 99 (159)
T 3k0z_A 36 MVHAAQRFYAFWDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFAAQNFRKIVP--NIHCEIED 99 (159)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCTTCCSSHHHHHHHHHHHHTTCC--SEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCC--CcEEEEEE
Confidence 46789999999986 7889999999997765432 367999999887654 45 56666654
No 85
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=92.54 E-value=0.67 Score=29.10 Aligned_cols=54 Identities=11% Similarity=0.189 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHh----cCCCceeeEEeeE
Q 033259 8 KAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLT----SLPFQQCQHSITT 66 (123)
Q Consensus 8 ~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~----~lp~~~~~~~i~s 66 (123)
++.++.||..++. +.+.+..+|+++..+ .| ...|++++.+.+. .+| ..++++..
T Consensus 6 ~~~v~~~~~~~~~~d~~~~~~~~a~d~~~--~~-~~~G~~~~~~~~~~~~~~~p--d~~~~i~~ 64 (128)
T 3ehc_A 6 NDIYLAYLDSLNHQAFDELGTFVDDNVEH--NG-RPFGLSGYRDMLVKDFADIP--DLRFEAEI 64 (128)
T ss_dssp HHHHHHHHHHHHTTCGGGGGGTEEEEEEE--TT-BCCHHHHHHHHHHHHHHHCT--TCCCCEEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHhcCcceEe--CC-CCCCHHHHHHHHHHHHhhCC--CceEEEEE
Confidence 5678899998886 678899999998754 45 7799999887665 456 55555554
No 86
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=92.49 E-value=1.4 Score=28.66 Aligned_cols=49 Identities=4% Similarity=-0.025 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhccCh--hhhhccccCCCEEEEcC----cccccHHHHHHHHhcCC
Q 033259 8 KAFVEHYYTTFDANR--TGLANLYQEGSMLTFEG----QKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 8 ~~Fv~~YY~~l~~~r--~~l~~~Y~~~s~~~~~g----~~~~G~~~I~~~l~~lp 56 (123)
++-++.|+..+.+.. +.|..+|++++.+.-+. ....|+++|.+.+..+.
T Consensus 23 kevv~r~~e~~~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~ 77 (136)
T 3hk4_A 23 AEIAKDFTELLKQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQ 77 (136)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHH
Confidence 455677778887653 45799999999987652 14799999999887554
No 87
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=91.99 E-value=0.56 Score=30.21 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=44.6
Q ss_pred HHHHHHHHHH-hhcc-C--hhhhhccccCCCEEEEcC-cccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 7 AKAFVEHYYT-TFDA-N--RTGLANLYQEGSMLTFEG-QKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 7 ~~~Fv~~YY~-~l~~-~--r~~l~~~Y~~~s~~~~~g-~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
.++.|+.||. .++. + .+.+..+|+++..+..++ ....|++++.+.+.. +| ..++++..
T Consensus 11 n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d~~~~~~~~~~~~G~~~~~~~~~~~~~~~p--d~~~~i~~ 77 (146)
T 3kkg_A 11 NVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFP--RLEVVVEN 77 (146)
T ss_dssp HHHHHHGGGTTTSTTSTTHHHHHHHHEEEEEEEEETTSCCEESHHHHHHHHHHHHHHST--TCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCC--CceeEEEE
Confidence 4678999999 7876 6 788999999998887655 478999999877654 56 55666654
No 88
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=91.84 E-value=1 Score=29.43 Aligned_cols=47 Identities=19% Similarity=0.362 Sum_probs=38.1
Q ss_pred HHHHHHHHhhcc-ChhhhhccccCCCEEEE-cCcccccHHHHHHHHhcC
Q 033259 9 AFVEHYYTTFDA-NRTGLANLYQEGSMLTF-EGQKIQGSQNIVAKLTSL 55 (123)
Q Consensus 9 ~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~-~g~~~~G~~~I~~~l~~l 55 (123)
+.|+.||..+++ +.+.+..+|++++.... .+....|+++|.+.+..+
T Consensus 22 ~~v~~~~~a~n~~D~~~l~~l~a~D~v~~~~~~~~~~G~e~i~~~~~~~ 70 (150)
T 3f8h_A 22 DTIARYFDAFNAGDTDGMLACLSEDVAHHVNEGNIRVGKEKFAAFCAHM 70 (150)
T ss_dssp CHHHHHHHHHHHTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHcCCCeEEeCCCCcceeCHHHHHHHHHHH
Confidence 468899999985 78999999999998433 356789999999988743
No 89
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=89.62 E-value=0.48 Score=32.06 Aligned_cols=52 Identities=10% Similarity=0.283 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcC----cccccHHHHHHHHhcCC
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEG----QKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g----~~~~G~~~I~~~l~~lp 56 (123)
+..+..|+.||..++. +.+.|..++.+++.+-.++ ....|+++|.+.+..+.
T Consensus 10 ~~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~ 66 (156)
T 3g16_A 10 AAMEKVIRTYYDGCNEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAV 66 (156)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHH
Confidence 5578889999999997 7899999999999887543 35689999999887654
No 90
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=89.35 E-value=0.31 Score=32.49 Aligned_cols=52 Identities=10% Similarity=0.197 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhcC
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTSL 55 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~l 55 (123)
.+..+.+++.|+..+.+ +.+.|..+|.+++.+.-. ..++.|+++|...|..+
T Consensus 19 ~~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~ 73 (148)
T 3f8x_A 19 NAAVQSGLQEWHRIIAEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAV 73 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 35678899999999986 789999999999998743 45789999999988754
No 91
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=88.11 E-value=2.8 Score=26.48 Aligned_cols=49 Identities=6% Similarity=0.112 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcc--cccHHHHHHHHhcC
Q 033259 7 AKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQK--IQGSQNIVAKLTSL 55 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~--~~G~~~I~~~l~~l 55 (123)
.++.++.||..++. +.+.+..+|+++..+...+.. ..|++++.+.+..+
T Consensus 4 ~~~~v~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~ 55 (144)
T 1sjw_A 4 QTEIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWV 55 (144)
T ss_dssp HHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHH
Confidence 35678899998875 678999999999766443322 38999998877654
No 92
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=87.32 E-value=0.16 Score=33.40 Aligned_cols=50 Identities=10% Similarity=0.095 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEcCcc--cccHHHHHHHHhcC
Q 033259 6 VAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFEGQK--IQGSQNIVAKLTSL 55 (123)
Q Consensus 6 i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~--~~G~~~I~~~l~~l 55 (123)
-.++.++.||..++. +.+.+..+|+++..+...+.. ..|++++.+.+..+
T Consensus 12 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~ 64 (153)
T 2f99_A 12 EQIAAVRRMVEAYNTGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWV 64 (153)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHH
Confidence 456788999999985 678999999998776544433 48999998877654
No 93
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=83.82 E-value=3.3 Score=26.75 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=38.1
Q ss_pred HHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHH----HHhcCCC
Q 033259 10 FVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVA----KLTSLPF 57 (123)
Q Consensus 10 Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~----~l~~lp~ 57 (123)
-|+.-...+.. +=+.|...|.++|.+.|. +....|++++.+ .+..||.
T Consensus 7 iVqrlW~al~AgD~D~l~adyaeDaV~i~P~sa~vl~GR~~~r~a~~~L~~~lP~ 61 (120)
T 3lyg_A 7 IVQRGWEALGAGDFDTLVTDYVEKMIFIMPGQADVLKGRQAFRSALDNLGEILPP 61 (120)
T ss_dssp HHHHHHHHHHHTCHHHHGGGEEEEEEEECSSTTCEEESHHHHHHHHTTHHHHSCT
T ss_pred HHHHHHHHHhcCCHHHHHHhcccCeEEEccCccceeecHHHHHHHHHHHHhhCCC
Confidence 35555666664 668999999999999999 568999999999 5566773
No 94
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=82.45 E-value=7.9 Score=25.13 Aligned_cols=60 Identities=12% Similarity=0.206 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHH-hhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhc----CCCceeeEEeeE
Q 033259 4 DSVAKAFVEHYYT-TFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTS----LPFQQCQHSITT 66 (123)
Q Consensus 4 ~~i~~~Fv~~YY~-~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~----lp~~~~~~~i~s 66 (123)
.+--++.|+.||. .++. +.+.+..+|+++...- +.....|++++.+.+.. .| ..+++|..
T Consensus 26 ~~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~v~h-~P~~~~G~e~~~~~~~~~~~~~p--d~~~~i~~ 91 (148)
T 3g0k_A 26 EQANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQH-SSLAEPSVEALKGFLDRVRAESP--DARQTIHR 91 (148)
T ss_dssp HHHHHHHHHHHHHHTTTTTCGGGGGGTEEEEEEEC-CSSSCSSHHHHHHHHHHHHHHCC--SCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHhcCcCeEEc-CCCCCCCHHHHHHHHHHHHHhCC--CceEEEEE
Confidence 4556788999999 7874 7888999999885443 33346899998877654 45 44555543
No 95
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=77.88 E-value=2.2 Score=28.73 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhcc-ChhhhhccccCCCEEEEc--CcccccHHHHHHHHhc
Q 033259 8 KAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE--GQKIQGSQNIVAKLTS 54 (123)
Q Consensus 8 ~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~--g~~~~G~~~I~~~l~~ 54 (123)
..+++.|+..+.+ +.+.|..+|.+++.+.-. ..++.|++++...|..
T Consensus 21 ~~~v~~f~~A~~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~ 70 (155)
T 3flj_A 21 HPTIARMQEVVAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGH 70 (155)
T ss_dssp CHHHHHHHHHHTTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHH
Confidence 3578999999986 789999999999998743 5689999999988765
No 96
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=75.65 E-value=4.4 Score=27.45 Aligned_cols=44 Identities=9% Similarity=0.066 Sum_probs=35.4
Q ss_pred HHHHHHhhcc-ChhhhhccccCCCEEEEcCcccccHHHHHHHHhc
Q 033259 11 VEHYYTTFDA-NRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTS 54 (123)
Q Consensus 11 v~~YY~~l~~-~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~ 54 (123)
|+-=-...++ +|+.+..-|.++|...-...-++|+++|..+|..
T Consensus 23 Vr~AEDaWNsrdP~rValAYT~Ds~WRNR~eF~~GR~eI~~FLtr 67 (166)
T 2imj_A 23 IRLAEDGWNSRDPERVSLAYTLDTQWRNRAEFAHNREEAKAFLTR 67 (166)
T ss_dssp HHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEECSHHHHHHHHHH
T ss_pred HHHHHhhhcccChHHHhhccCCCCceeccccccCcHHHHHHHHHH
Confidence 3333355554 8999999999999987777889999999998875
No 97
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=73.44 E-value=17 Score=23.98 Aligned_cols=115 Identities=13% Similarity=0.028 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhhcc-ChhhhhccccCCCEEEEc---C-----------c---ccccHHHHHHHHhc---------CC
Q 033259 4 DSVAKAFVEHYYTTFDA-NRTGLANLYQEGSMLTFE---G-----------Q---KIQGSQNIVAKLTS---------LP 56 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~~~~~---g-----------~---~~~G~~~I~~~l~~---------lp 56 (123)
....++|+..|-..+|. +-+....+|.+++.+... + . ...|++.+.+.+.. .|
T Consensus 12 ~~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~d~~~~~~~~~~~~~~l~~rv~~l~~~~~~~~~p 91 (172)
T 2b1x_B 12 VREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDP 91 (172)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEEEECCCCTTSSCCEEEEEEEEEECHHHHHHHHHHHTSSCCGGGSS
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHhccCCEEEEEEeecccccccccCCCcccEEEeCCHHHHHHHHHHHhcCcccccCC
Confidence 35678899999999997 457888999999986432 1 1 11477888774432 36
Q ss_pred CceeeEEeeEeeeeeeCCC-CcEEEEEEEEEEE-C-CCCcceeeE-E-EEEeeeCCCCcEEEEceeEEe
Q 033259 57 FQQCQHSITTVDCQPSGPA-GGMLVFVSGNLQL-A-GEQHALKFS-Q-MFHLMPTPQGSFYVLNDIFRL 120 (123)
Q Consensus 57 ~~~~~~~i~s~d~q~~~~~-~~ilI~V~G~~~~-~-~~~~~~~F~-q-tFvL~~~~~~~y~I~nD~fr~ 120 (123)
...+.|.|+.+-.... .+ +...+...-.+.. . +.+...-|. + .-.|.+.+ ++|.|..=...+
T Consensus 92 ~~~t~H~i~n~~I~~~-~~~d~a~~~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~-g~Wri~~R~v~l 158 (172)
T 2b1x_B 92 PSRSRHFVTNVRVATG-DSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAG-DSFLMAKRVVLL 158 (172)
T ss_dssp CCEEEEEEEEEEEEEC-SSTTEEEEEEEEEEEEECTTCSCCEEEEEEEEEEEEEET-TEEEEEEEEEEE
T ss_pred CCeEEEEecCEEEEEe-cCCCEEEEEEEEEEEEEcCCCCceEEEEEEEEEEEEEcC-CEEEEEEEEEEE
Confidence 6789999998777554 22 3333222211111 2 211112221 1 22355555 889998766544
No 98
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=63.96 E-value=28 Score=22.80 Aligned_cols=113 Identities=9% Similarity=0.065 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHhhccC-hhhhhccccCCCEEEEcC-------c-----ccccHHHHHHHHhc------CCCceeeEEee
Q 033259 5 SVAKAFVEHYYTTFDAN-RTGLANLYQEGSMLTFEG-------Q-----KIQGSQNIVAKLTS------LPFQQCQHSIT 65 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~~-r~~l~~~Y~~~s~~~~~g-------~-----~~~G~~~I~~~l~~------lp~~~~~~~i~ 65 (123)
.-.++|+..|=..+|.. -+....+|.+++.+.... . ...|++.+.+.+.. .|...+.|.|+
T Consensus 14 ~~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~~p~~rt~H~vs 93 (163)
T 3eby_A 14 SAIDDFNAAYGLCLDDDRLEQWPTLFVDDCLYQVIARENVDNGLPAAVMYCDSKGMLADRVVALRKANVFPEHFNRHLIG 93 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGTGGGEEEEEEEEEEEGGGGGSSSCCEEEEESSHHHHHHHHHHHHHTC----CEEEEEEC
T ss_pred HHHHHHHHHHHHHhccccHHHHHHhhcCCEEEEeeccccCCCCCCcEEEEcCCHHHHHHHHHHhhccCCCCCcceeEEEc
Confidence 34578999999999984 588889999999876532 1 12477777665543 24458899998
Q ss_pred EeeeeeeCCCCcEEEEEEEEEE-ECCCCcceee--EE-EEEeeeCCCCcEEEEceeEE
Q 033259 66 TVDCQPSGPAGGMLVFVSGNLQ-LAGEQHALKF--SQ-MFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 66 s~d~q~~~~~~~ilI~V~G~~~-~~~~~~~~~F--~q-tFvL~~~~~~~y~I~nD~fr 119 (123)
.+..... .++.+.+...-.+. ...++....| .+ .-.|.+.+ ++|.|.+=...
T Consensus 94 n~~i~~~-~~d~a~v~s~~~~~~~~~~~~~~~~~~G~y~D~l~r~~-~gwri~~R~v~ 149 (163)
T 3eby_A 94 RAVITGV-EGDQVSAEASYVVFQTRNDGETRIYNAGKYVDRFDLSG-GTVRLKSRTCI 149 (163)
T ss_dssp CCEEEEE-ETTEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECCT-TCCEEEEEEEE
T ss_pred CEEEEec-CCCEEEEEEEEEEEEEcCCCccEEEEEEEEEEEEEEEC-CEEEEEEEEEE
Confidence 8666333 23333332221111 1111112212 12 23455655 88998765443
No 99
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=59.31 E-value=36 Score=22.58 Aligned_cols=111 Identities=10% Similarity=0.099 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhhccC-hhhhhccccCCCEEEEcCc---------c--------cccHHHHHHH---------HhcCCCce
Q 033259 7 AKAFVEHYYTTFDAN-RTGLANLYQEGSMLTFEGQ---------K--------IQGSQNIVAK---------LTSLPFQQ 59 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~~-r~~l~~~Y~~~s~~~~~g~---------~--------~~G~~~I~~~---------l~~lp~~~ 59 (123)
..+|+..|-.++|.. -+....+|.+++.+..... + ..++..+... +...|...
T Consensus 10 i~~~l~~~a~~lD~~~~~~w~~lf~~D~~Y~~p~~~~~~~~~~d~~~~~~~i~~~~~~~L~~RV~rl~~~~~~~~~p~~r 89 (164)
T 3e99_A 10 IQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSATVPDTR 89 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECCCC-----------CEEEEESSHHHHHHHHHHHHHHHHHCCSSCCE
T ss_pred HHHHHHHHHHHhccccHHHHHHhcCCCEEEEEeccccccccccCCCCcceEEEcCCHHHHHHHHHHHhCccccccCCCce
Confidence 467999999999985 4788899999998754321 0 2445444432 34567778
Q ss_pred eeEEeeEeeeeeeCCCCcEEEEEEEEEEE-CCCCcceeeE-EEEEeeeCCCCcEEEEceeEE
Q 033259 60 CQHSITTVDCQPSGPAGGMLVFVSGNLQL-AGEQHALKFS-QMFHLMPTPQGSFYVLNDIFR 119 (123)
Q Consensus 60 ~~~~i~s~d~q~~~~~~~ilI~V~G~~~~-~~~~~~~~F~-qtFvL~~~~~~~y~I~nD~fr 119 (123)
+.|.|+.+-..+. .++.+.+...-.+.. .......-+. ....|...+ ++|.|.+=...
T Consensus 90 trH~vsnv~v~~~-~~~~~~v~s~~~v~~~r~~~~~~~~G~~~d~L~r~~-~~wri~~R~v~ 149 (164)
T 3e99_A 90 TSHNIANVERESA-DGDVHTVRFNWHTLSYRYKTVSSYFGMSRYAIDFSG-DAPKIVSKYVV 149 (164)
T ss_dssp EEEEEEEEEEEEE-ETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSS-SSCEEEEEEEE
T ss_pred EEEEEeCEEEEEe-CCCEEEEEEEEEEEEECCCCeEEEEEEEEEEEEEEC-CEEEEEEEEEE
Confidence 9999999877655 334343333322221 1111111111 223566655 88988765443
No 100
>1pfs_A PF3 SSDBP, PF3 single-stranded DNA binding protein; viral, bacteriophage PF3; NMR {Pseudomonas phage PF3} SCOP: b.40.4.7
Probab=53.39 E-value=31 Score=20.33 Aligned_cols=30 Identities=7% Similarity=0.226 Sum_probs=20.2
Q ss_pred cEEEEEEEEEEEC--CCCcceeeEEEEEeeeC
Q 033259 77 GMLVFVSGNLQLA--GEQHALKFSQMFHLMPT 106 (123)
Q Consensus 77 ~ilI~V~G~~~~~--~~~~~~~F~qtFvL~~~ 106 (123)
.|.|.++|.++.+ .++.|..|.|-|+=-+.
T Consensus 2 ti~I~~T~~~RsGvsksg~pYtm~eaf~hL~g 33 (78)
T 1pfs_A 2 NIQITFTDSVRQGTSAKGNPYTFQEGFLHLED 33 (78)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEEEEEEECCTT
T ss_pred eEEEEEeeeEEecccccCCceEeEeeeeeCCC
Confidence 4788888888865 33446777777764443
No 101
>2ia7_A Tail lysozyme, putative; NP_952040.1, putative tail lysozyme, structural genomics, JO center for structural genomics, JCSG; 1.44A {Geobacter sulfurreducens} SCOP: d.373.1.1
Probab=47.76 E-value=43 Score=21.23 Aligned_cols=52 Identities=15% Similarity=0.283 Sum_probs=32.4
Q ss_pred HHHHHHHhc-CCCceeeEEeeEeeeeeeC-CCCcEEEEEEEEEEECCCCcceeeEEEEEe
Q 033259 46 QNIVAKLTS-LPFQQCQHSITTVDCQPSG-PAGGMLVFVSGNLQLAGEQHALKFSQMFHL 103 (123)
Q Consensus 46 ~~I~~~l~~-lp~~~~~~~i~s~d~q~~~-~~~~ilI~V~G~~~~~~~~~~~~F~qtFvL 103 (123)
.+|.+.|.. .| +. ++..++..+.. .++.+.+.|.+.+...+. +..++-.|.|
T Consensus 77 ~~i~~al~~~EP--Ri--~~~~V~v~~~~~~~~~l~i~I~~~~~~~~~--~~~l~~~~~l 130 (134)
T 2ia7_A 77 NEVKEALILWEP--RI--ELLSVTASPREAAEGRLLIDIEYRVRSTNT--RFNLVYPFYL 130 (134)
T ss_dssp HHHHHHHHHHCT--TE--EEEEEEEECTTGGGTEEEEEEEEEETTTTE--EEEEEEEEEC
T ss_pred HHHHHHHHHhCC--Ce--EEEEEEEeecCCCCCEEEEEEEEEEecCCC--EEEEEEEEEe
Confidence 456666665 56 33 66666665532 357788999998854433 4566666665
No 102
>4giw_A RUN and SH3 domain-containing protein 1; NGF-TRKA signaling pathway, NF-KB pathway, signaling protein; 2.00A {Homo sapiens}
Probab=47.58 E-value=7.7 Score=26.88 Aligned_cols=51 Identities=16% Similarity=0.309 Sum_probs=35.2
Q ss_pred HHHHHHHHHhhccChhhhhccccCCCEEEE-cCcccccHHHHHHH---HhcCCCc
Q 033259 8 KAFVEHYYTTFDANRTGLANLYQEGSMLTF-EGQKIQGSQNIVAK---LTSLPFQ 58 (123)
Q Consensus 8 ~~Fv~~YY~~l~~~r~~l~~~Y~~~s~~~~-~g~~~~G~~~I~~~---l~~lp~~ 58 (123)
+.-+..|...+-.+++-+.++|.+.|.|.- .+.--.+.++|... |+.+||.
T Consensus 130 ~~~L~~~l~~l~~~~~~l~~~Y~~~a~lr~s~~~~~~l~~~l~~~L~~L~~l~F~ 184 (198)
T 4giw_A 130 TKQLELWFSSLQEDAGLLSLMYMPTGFFSLARGGCPSLSTELLLLLQPLSVLTFH 184 (198)
T ss_dssp HTCHHHHHHHHHTCHHHHHHHBCTTSHHHHTSSBTTBHHHHHHHHHGGGGGSCCB
T ss_pred HCHHHHHHHHHHhChHHHHHHcCCchHhhcccccChHHHHhhhccccccccccee
Confidence 344667999999999999999999998852 12122445555544 6667765
No 103
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=38.61 E-value=87 Score=20.96 Aligned_cols=114 Identities=14% Similarity=0.015 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhhccC-hhhhhccccCCCEEEEcCc--------------------ccccHHHHHHHHh---------c
Q 033259 5 SVAKAFVEHYYTTFDAN-RTGLANLYQEGSMLTFEGQ--------------------KIQGSQNIVAKLT---------S 54 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~~-r~~l~~~Y~~~s~~~~~g~--------------------~~~G~~~I~~~l~---------~ 54 (123)
.-..+|+..|=.++|.. -+....+|.+++.+..... ...++..+.+.+. +
T Consensus 24 ~eI~~~l~r~A~lLD~~d~d~w~~lfteD~~y~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Rv~rl~~~~~~a~ 103 (187)
T 1uli_B 24 HEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQEYSGAREYAHFDDNAQMMRGRLRKITSDVSWSE 103 (187)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTCTTCGGG
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHcccCEEEEeeccccccccccccccCCccceeeecCCHHHHHHHHHHHhccccccc
Confidence 45678999999999985 5788899999998754321 1235555555433 2
Q ss_pred CCCceeeEEeeEeeeeeeCCCCcEEEEEEEEEEE-CCCCcceeeE--EEEEeeeCCCC--cEEEEceeEE
Q 033259 55 LPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQL-AGEQHALKFS--QMFHLMPTPQG--SFYVLNDIFR 119 (123)
Q Consensus 55 lp~~~~~~~i~s~d~q~~~~~~~ilI~V~G~~~~-~~~~~~~~F~--qtFvL~~~~~~--~y~I~nD~fr 119 (123)
.|...+.|.|+.+-......++.+.+...-.+.. ..+.....|. ..-.|...+ + +|.|..=...
T Consensus 104 ~p~~rtrH~isNv~V~~~~~~d~a~vrs~~~~~~~r~~~~~~~~~g~r~D~l~r~~-~~~gwri~~R~v~ 172 (187)
T 1uli_B 104 NPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIFAGERKDILRRTG-SEAGFELAKRTIL 172 (187)
T ss_dssp SSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECS-STTCEEEEEEEEE
T ss_pred CCCCceEEEecCEEEEEeCCCCEEEEEEEEEEEEEcCCCceEEEEEEEEEEEEECC-CccceEEEEEEEE
Confidence 4666899999988776641133333332222221 1111112221 224566665 6 8999875544
No 104
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=38.34 E-value=83 Score=20.63 Aligned_cols=68 Identities=7% Similarity=-0.014 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhhcc-Chhhhh-ccccCCCEEEEcC------------c-------ccccHHHHHHHHhc---------
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLA-NLYQEGSMLTFEG------------Q-------KIQGSQNIVAKLTS--------- 54 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~-~~Y~~~s~~~~~g------------~-------~~~G~~~I~~~l~~--------- 54 (123)
.-.++|+..|=..+|. +-+... .+|.+++.+.... . ...|...+.+.+..
T Consensus 14 ~~I~~~l~rya~~lD~~d~d~w~~~lfteD~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~~~~~~~ 93 (174)
T 2gbw_B 14 YDIEAHYRAEVRMFQTGQYREWLQGMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQVWME 93 (174)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEEEEECCCCCCTTCCCCCCCTTSCEEEEECHHHHHHHHHHTTTSCCGGG
T ss_pred HHHHHHHHHHHHHhccccHHHHHHhhccCCEEEEeeccccccccccccCCCcccceeEcCCHHHHHHHHHHHhcCCcccc
Confidence 4568899999999997 457888 9999999875321 0 12466666665543
Q ss_pred CCCceeeEEeeEeeeeee
Q 033259 55 LPFQQCQHSITTVDCQPS 72 (123)
Q Consensus 55 lp~~~~~~~i~s~d~q~~ 72 (123)
.|...+.|.|+.+-....
T Consensus 94 ~p~~rt~H~isN~~i~~~ 111 (174)
T 2gbw_B 94 DPPSKIRYFVSNVEAFEA 111 (174)
T ss_dssp SSCCEEEEEEEEEEEEEE
T ss_pred CCCCceEEEecCEEEEEc
Confidence 355689999998776553
No 105
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=37.31 E-value=70 Score=20.22 Aligned_cols=66 Identities=20% Similarity=0.229 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhccCh-hhhh-ccccCCCEEEEc---C--cccccHHHHHHHHhc-C-CCceeeEEeeEeeeeee
Q 033259 7 AKAFVEHYYTTFDANR-TGLA-NLYQEGSMLTFE---G--QKIQGSQNIVAKLTS-L-PFQQCQHSITTVDCQPS 72 (123)
Q Consensus 7 ~~~Fv~~YY~~l~~~r-~~l~-~~Y~~~s~~~~~---g--~~~~G~~~I~~~l~~-l-p~~~~~~~i~s~d~q~~ 72 (123)
-++.+..|-..+|... +.|. .+|.+++.+.+. | ....|.++|.+.+.. + ++..+.|.+........
T Consensus 13 I~~L~~rY~~~~D~~d~~~l~~~~ft~Da~~d~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~t~H~~~n~~I~vd 87 (159)
T 4gb5_A 13 IIELFGRYADIADLKEFTDLPRRVHTDPLTIDFESVTGMPPMTVPLSDYGAALRASFGAFSATHHAITGHVVTID 87 (159)
T ss_dssp HHHHHHHHHHHHHTTCCSSHHHHHEEEEEEEECHHHHCCCCEEECHHHHHHHHHHHHTTCSEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhhCcCCEEEEecCCCCCcccccHHHHHHHHHHHhccCCceEEEecCCceEEEc
Confidence 3567889999999754 6775 699999988764 2 356789999887643 1 23478888887555433
No 106
>3ub1_A ORF13-like protein; NTF2-like, transport protein; HET: MSE; 1.80A {Clostridium perfringens}
Probab=29.10 E-value=1.6e+02 Score=21.20 Aligned_cols=30 Identities=13% Similarity=0.317 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhhcc-ChhhhhccccCCCE
Q 033259 5 SVAKAFVEHYYTTFDA-NRTGLANLYQEGSM 34 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~-~r~~l~~~Y~~~s~ 34 (123)
+-...|++.||..+-+ +..+|..+..+++.
T Consensus 155 ~~i~~FL~tFFk~Y~sa~~~eL~yy~~~~~~ 185 (261)
T 3ub1_A 155 KKITDSVSQFFKAYYEQNQTQIDYFLVDGAD 185 (261)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHTTBCTTCC
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHhcCCCc
Confidence 4467999999999975 78888877777664
No 107
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=28.27 E-value=1.4e+02 Score=20.11 Aligned_cols=115 Identities=13% Similarity=0.034 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhhccC-hhhhhccccCCCEEEEcCc--------------------ccccHHHHHHHHhc---------
Q 033259 5 SVAKAFVEHYYTTFDAN-RTGLANLYQEGSMLTFEGQ--------------------KIQGSQNIVAKLTS--------- 54 (123)
Q Consensus 5 ~i~~~Fv~~YY~~l~~~-r~~l~~~Y~~~s~~~~~g~--------------------~~~G~~~I~~~l~~--------- 54 (123)
.-..+|+..|-.++|.. -+....+|.+++.+..... -..++..+...+.+
T Consensus 23 ~~i~~~l~~~a~llD~~~~~~w~~lft~D~~Y~~p~~~~~~~~d~~~~~~~~~~~~~~~d~r~~L~~RV~rl~t~~~~a~ 102 (186)
T 3gzx_B 23 HQVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRIRQKTSDLNWAE 102 (186)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTTCCGGG
T ss_pred HHHHHHHHHHHHHhcccCHHHHHHhCCCCEEEEEecCCCccccccccccCccccceeeeCCHHHHHHHHHHHhccccccc
Confidence 45678999999999985 4777899999988765321 12356666655543
Q ss_pred CCCceeeEEeeEeeeeeeCCCCcEEEEEEEEEEE-CCCCcceee-EE-EEEeee-CCCC-cEEEEceeEEe
Q 033259 55 LPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQL-AGEQHALKF-SQ-MFHLMP-TPQG-SFYVLNDIFRL 120 (123)
Q Consensus 55 lp~~~~~~~i~s~d~q~~~~~~~ilI~V~G~~~~-~~~~~~~~F-~q-tFvL~~-~~~~-~y~I~nD~fr~ 120 (123)
.|...+.|.|+.+.......++.+.+...=.+.. ..++...-| .. .-.|.. .+ + +|.|.+=...+
T Consensus 103 ~P~~RtrH~vsNv~v~~~~~~~~~~vrs~~~v~~~r~~~~~~~~~G~y~D~L~r~~~-g~~wrI~~R~V~l 172 (186)
T 3gzx_B 103 DPPSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLRIADN-PLGFQIAKRTIIL 172 (186)
T ss_dssp SSCCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEECSS-TTSEEEEEEEEEE
T ss_pred CCCceEEEEEcCEEEEEecCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEEEEcCC-CceEEEEEEEEEE
Confidence 3767899999998876541133333332222221 111112222 22 335666 44 7 89998755443
No 108
>2dwk_A Protein RUFY3; RUN domain, effector, RAP2, bundle, protein binding, structural genomics, NPPSFA; 2.00A {Mus musculus} PDB: 2dwg_A 2cxf_A 2cxl_A
Probab=27.76 E-value=24 Score=23.99 Aligned_cols=41 Identities=17% Similarity=0.294 Sum_probs=29.3
Q ss_pred HHHHHHhhccChhhhhccccCCCEEEEcCcccccHHHHHHHHhcCC
Q 033259 11 VEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLP 56 (123)
Q Consensus 11 v~~YY~~l~~~r~~l~~~Y~~~s~~~~~g~~~~G~~~I~~~l~~lp 56 (123)
+..|...+-.+++-+.+||.+.|.|.-. +.+.|...+..|.
T Consensus 119 L~~~l~~l~~~~~~l~~~Y~~~All~~~-----e~~~l~~~L~gL~ 159 (180)
T 2dwk_A 119 LSEYMKALINKKELLSEFYEVNALMMEE-----EGAIIAGLLVGLN 159 (180)
T ss_dssp HHHHHHHHHTCHHHHTTTBCTTSGGGSH-----HHHHHHHHGGGGG
T ss_pred HHHHHHHHHhChHHHHhhCCCCccccCc-----cHHHHHHHHhCcc
Confidence 4568888988999999999999998321 1245555555443
No 109
>4fbo_A Pseudomonas fluorescens agglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.70A {Pseudomonas fluorescens}
Probab=23.38 E-value=1.5e+02 Score=19.06 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=22.3
Q ss_pred EEEEEEEECCCCcceeeEEEEEeeeCCCCcEEEEce
Q 033259 81 FVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLND 116 (123)
Q Consensus 81 ~V~G~~~~~~~~~~~~F~qtFvL~~~~~~~y~I~nD 116 (123)
+.+|++++.++. |-.|--+ |.. .+.|-|.|+
T Consensus 46 tl~GTMTY~GEG-pIGFr~~--~~~--~n~Y~VeNQ 76 (133)
T 4fbo_A 46 SFTGTMTYAGEG-PIGFKAQ--RTG--QNQYNVENQ 76 (133)
T ss_dssp EEEEEEEETTSC-CEEEEEE--EEE--TTEEEEEEE
T ss_pred eeeeeEEEcccC-CeeeEeE--ecc--CceeEEEcc
Confidence 468999999998 8888765 222 366777664
No 110
>3j20_S 30S ribosomal protein S17E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.88 E-value=36 Score=19.62 Aligned_cols=18 Identities=28% Similarity=0.567 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHhhccC
Q 033259 4 DSVAKAFVEHYYTTFDAN 21 (123)
Q Consensus 4 ~~i~~~Fv~~YY~~l~~~ 21 (123)
..+|+..++.||..|..|
T Consensus 10 Kr~a~~liekY~~~~t~D 27 (67)
T 3j20_S 10 KRVARELVNKYPNEFTTD 27 (67)
T ss_dssp HHHHHHHHHHSGGGCCSC
T ss_pred HHHHHHHHHHhhhhhccc
Confidence 468999999999999875
No 111
>4ba6_A Endoglucanase CEL5A; carbohydrate-binding protein, plant cell WALL degradation, beta-jelly roll; 1.42A {Eubacterium cellulosolvens}
Probab=20.54 E-value=1.7e+02 Score=18.48 Aligned_cols=50 Identities=22% Similarity=0.308 Sum_probs=32.1
Q ss_pred EcCcccccHHHHHHHHhcCCCceeeEEeeEeeeeeeCCCCcEEE-EEEEEEEECC
Q 033259 37 FEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLV-FVSGNLQLAG 90 (123)
Q Consensus 37 ~~g~~~~G~~~I~~~l~~lp~~~~~~~i~s~d~q~~~~~~~ilI-~V~G~~~~~~ 90 (123)
.+|..+-.+++|.+..-+-.|.. +.-+-..|.+...|+.+ .|.|..+.++
T Consensus 83 vdgtavftkeqiakaygsddfs~----ldyi~vkplps~~g~tvtki~~~yt~g~ 133 (144)
T 4ba6_A 83 VDGTAVFTKEQIAKAYGSDDFSG----LDYIAVKPLPSEEGVTVTKVSGIYTNGG 133 (144)
T ss_dssp ETTEEEEEHHHHHHHHTCSCCTT----CCEEEEEECSCSSCEEEEEEEEEECCC-
T ss_pred EcceEEecHHHHHHHhCCCcccC----cceEEeecCCcccCeEEEEEEEEEcCCC
Confidence 45667778999999998766653 33444556644556654 4888776554
No 112
>2izy_A CAMP-dependent protein kinase regulatory subunit II; D/D, RII, PKA, acetylation, transferase, CAMP- binding, phosphorylation, nucleotide-binding; 2.2A {Mus musculus} SCOP: a.31.1.1 PDB: 1l6e_A 1r2a_A 2drn_A 2h9r_A
Probab=20.26 E-value=34 Score=18.65 Aligned_cols=18 Identities=33% Similarity=0.685 Sum_probs=14.0
Q ss_pred HHHHHHHHhhccChhhhh
Q 033259 9 AFVEHYYTTFDANRTGLA 26 (123)
Q Consensus 9 ~Fv~~YY~~l~~~r~~l~ 26 (123)
+|...||+.+...|+.|-
T Consensus 31 ~Faa~YF~~L~~~~~~~~ 48 (54)
T 2izy_A 31 DFAVEYFTRLREARRGLE 48 (54)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHh
Confidence 688899998887776653
Done!