AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>033265
MALKNLFLIILFLITSLIANASAMNKPASYGLGARLQASGWPGGQFNECLKAYQELNKCS
AVIYQFFFTGMANVAPCCGAIETVTRKCAWPSTLPWFGYTPQQSNIFLSYCRAISPAPSP
AQA
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with EC1.4 EC1.4 EC1.4 AT4G39340	protein from Arabidopsis thaliana	4.5e-11
BLAST match view associations BLAST with EC1.2 EC1.2 EC1.2 AT2G21740	protein from Arabidopsis thaliana	8.4e-10
BLAST match view associations BLAST with EC1.3 EC1.3 EC1.3 AT2G21750	protein from Arabidopsis thaliana	5.9e-09
BLAST match view associations BLAST with EC1.1 EC1.1 EC1.1 AT1G76750	protein from Arabidopsis thaliana	1.6e-08
BLAST match view associations BLAST with EC1.5 EC1.5 EC1.5 AT5G64720	protein from Arabidopsis thaliana	8.1e-05
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033265
        (123 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2136293 - symbol:EC1.4 "AT4G39340" species:370...   153  4.5e-11   1
TAIR|locus:2052536 - symbol:EC1.2 "AT2G21740" species:370...   141  8.4e-10   1
TAIR|locus:2052556 - symbol:EC1.3 "AT2G21750" species:370...   133  5.9e-09   1
TAIR|locus:2030136 - symbol:EC1.1 "AT1G76750" species:370...   129  1.6e-08   1
TAIR|locus:2176080 - symbol:EC1.5 "AT5G64720" species:370...    94  8.1e-05   1


>TAIR|locus:2136293 [details] [associations]
            symbol:EC1.4 "AT4G39340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0009567 "double
            fertilization forming a zygote and endosperm" evidence=IGI]
            [GO:0031982 "vesicle" evidence=IDA] [GO:0080155 "regulation of
            double fertilization forming a zygote and endosperm" evidence=IMP]
            [GO:2000008 "regulation of protein localization to cell surface"
            evidence=IMP] GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161595 GO:GO:0031982 GO:GO:0080155 GO:GO:2000008
            EMBL:AL050351 UniGene:At.24772 UniGene:At.75608
            HOGENOM:HOG000272692 InterPro:IPR008502 Pfam:PF05617
            ProtClustDB:CLSN2683714 EMBL:DQ446907 EMBL:DQ653255 IPI:IPI00526543
            PIR:T08582 RefSeq:NP_195644.1 UniGene:At.75461 PRIDE:Q9T039
            EnsemblPlants:AT4G39340.1 GeneID:830089 KEGG:ath:AT4G39340
            TAIR:At4g39340 eggNOG:NOG330298 InParanoid:Q9T039 OMA:DIITTNC
            PhylomeDB:Q9T039 Genevestigator:Q9T039 Uniprot:Q9T039
        Length = 127

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 37/107 (34%), Positives = 54/107 (50%)

Query:    22 SAMNKPA--SYGLGARLQASGWPGGQFNECLKAYQELNKCSAVIYQFFFTGMANVA-PCC 78
             S  + PA  S  + ARLQ+ G       EC  A  EL  C+  I  FF  G   +   CC
Sbjct:    24 SGRDLPAESSTNIAARLQSGG-----LMECWNALYELKSCTNEIVLFFLNGETKLGVSCC 78

Query:    79 GAIETVTRKCAWPSTLPWFGYTPQQSNIFLSYCRA-----ISPAPSP 120
              +++ +T  C WP+ L   G+TP+++N+   +C+       SPAPSP
Sbjct:    79 ESVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124


>TAIR|locus:2052536 [details] [associations]
            symbol:EC1.2 "AT2G21740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0009567 "double
            fertilization forming a zygote and endosperm" evidence=IGI]
            [GO:0031982 "vesicle" evidence=IDA] [GO:0080155 "regulation of
            double fertilization forming a zygote and endosperm" evidence=IMP]
            [GO:2000008 "regulation of protein localization to cell surface"
            evidence=IMP] GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0031982 GO:GO:0080155 EMBL:AC007019 GO:GO:2000008
            HOGENOM:HOG000272692 InterPro:IPR008502 Pfam:PF05617 EMBL:DQ446544
            EMBL:DQ653011 IPI:IPI00542544 PIR:F84604 RefSeq:NP_179766.1
            UniGene:At.66228 EnsemblPlants:AT2G21740.1 GeneID:816711
            KEGG:ath:AT2G21740 TAIR:At2g21740 eggNOG:NOG293372
            InParanoid:Q9SJ24 OMA:GGGLMEC PhylomeDB:Q9SJ24
            ProtClustDB:CLSN2683714 ArrayExpress:Q9SJ24 Genevestigator:Q9SJ24
            Uniprot:Q9SJ24
        Length = 125

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 30/83 (36%), Positives = 42/83 (50%)

Query:    43 GGQFNECLKAYQELNKCSAVIYQFFFTGMANVA-PCCGAIETVTRKCAWPSTLPWFGYTP 101
             GG   EC  A  EL  C+  I  FF  G   +   CC A+E +T  C WP+ L   G+T 
Sbjct:    40 GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTS 98

Query:   102 QQSNIFLSYCRA-----ISPAPS 119
              ++N+   +C++      SPAPS
Sbjct:    99 DETNVLRGFCQSPNSGGSSPAPS 121


>TAIR|locus:2052556 [details] [associations]
            symbol:EC1.3 "AT2G21750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0009567 "double
            fertilization forming a zygote and endosperm" evidence=IGI]
            [GO:0031982 "vesicle" evidence=IDA] [GO:0080155 "regulation of
            double fertilization forming a zygote and endosperm" evidence=IMP]
            [GO:2000008 "regulation of protein localization to cell surface"
            evidence=IMP] GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0031982 GO:GO:0080155 EMBL:AC007019 GO:GO:2000008
            HOGENOM:HOG000272692 InterPro:IPR008502 Pfam:PF05617
            ProtClustDB:CLSN2683714 EMBL:DQ446545 EMBL:DQ653012 IPI:IPI00522390
            PIR:G84604 RefSeq:NP_179767.1 UniGene:At.66229 PRIDE:Q9SJ23
            EnsemblPlants:AT2G21750.1 GeneID:816712 KEGG:ath:AT2G21750
            TAIR:At2g21750 eggNOG:NOG261385 InParanoid:Q9SJ23 OMA:CNAVDVI
            PhylomeDB:Q9SJ23 Genevestigator:Q9SJ23 Uniprot:Q9SJ23
        Length = 125

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query:    43 GGQFNECLKAYQELNKCSAVIYQFFFTGMANVA-PCCGAIETVTRKCAWPSTLPWFGYTP 101
             GG   +C  A  EL  C+  I  FF  G   +   CC A++ +T  C WP+ L   G+T 
Sbjct:    40 GGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC-WPAMLTSLGFTL 98

Query:   102 QQSNIFLSYCRA-----ISPAPSPAQ 122
             +++N+   +C++      SPA SP +
Sbjct:    99 EETNVLRGFCQSPNSGGSSPALSPVK 124


>TAIR|locus:2030136 [details] [associations]
            symbol:EC1.1 "AT1G76750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM;IDA] [GO:0005622
            "intracellular" evidence=IDA] [GO:0009567 "double fertilization
            forming a zygote and endosperm" evidence=IGI] [GO:0031982 "vesicle"
            evidence=IDA] [GO:0048240 "sperm capacitation" evidence=IDA]
            [GO:0080155 "regulation of double fertilization forming a zygote
            and endosperm" evidence=IMP] [GO:2000008 "regulation of protein
            localization to cell surface" evidence=IMP] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0031982 GO:GO:0080155
            EMBL:AC010718 GO:GO:2000008 EMBL:AY735569 EMBL:AY773832
            IPI:IPI00546130 PIR:A96796 RefSeq:NP_177801.1 UniGene:At.34618
            UniGene:At.72900 DNASU:844009 EnsemblPlants:AT1G76750.1
            GeneID:844009 KEGG:ath:AT1G76750 TAIR:At1g76750 eggNOG:NOG301930
            HOGENOM:HOG000272692 InParanoid:Q9SRD8 OMA:CSAIRTI PhylomeDB:Q9SRD8
            ProtClustDB:CLSN2912748 Genevestigator:Q9SRD8 InterPro:IPR008502
            Pfam:PF05617 Uniprot:Q9SRD8
        Length = 158

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query:    49 CLKAYQELNKCSAVIYQFFFTGMANVAP-CCGAIETVTRKCAWPSTLPWFGYTPQQSNIF 107
             C  +  +L  CS  +  FF  G   + P CC AI T+ RKC WP+ +   G+T Q+ ++ 
Sbjct:    57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC-WPTMIGVLGFTAQEGDML 115

Query:   108 LSYC 111
               YC
Sbjct:   116 QGYC 119


>TAIR|locus:2176080 [details] [associations]
            symbol:EC1.5 "AT5G64720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005576 "extracellular region"
            evidence=IDA] [GO:0009567 "double fertilization forming a zygote
            and endosperm" evidence=IGI] [GO:0031982 "vesicle" evidence=IDA]
            [GO:0080155 "regulation of double fertilization forming a zygote
            and endosperm" evidence=IMP] [GO:2000008 "regulation of protein
            localization to cell surface" evidence=IMP] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005576 EMBL:AB025637 GO:GO:0031982
            GO:GO:0080155 GO:GO:2000008 HOGENOM:HOG000272692 InterPro:IPR008502
            Pfam:PF05617 EMBL:BT029327 IPI:IPI00528425 RefSeq:NP_201277.3
            UniGene:At.50916 DNASU:836593 EnsemblPlants:AT5G64720.1
            GeneID:836593 KEGG:ath:AT5G64720 TAIR:At5g64720 eggNOG:NOG322274
            OMA:LREYCEF PhylomeDB:Q9FGG1 ProtClustDB:CLSN2925626
            Genevestigator:Q9FGG1 Uniprot:Q9FGG1
        Length = 155

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 27/92 (29%), Positives = 36/92 (39%)

Query:    44 GQFNECLKAYQELNKCSAVIYQFFFTGMANVAP---------CCGAIETVTRKCAWPSTL 94
             G   +C  A  EL  C+  I +FF +      P         CCGAI  V + C W    
Sbjct:    48 GNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDC-WSVMF 106

Query:    95 PWFGYTPQQSNIFLSYCR------AISPAPSP 120
                G T  + N    YC        +SP+P+P
Sbjct:   107 TSLGLTTMEGNNLREYCEFQAEKSELSPSPAP 138


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.131   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123       110   0.00091  102 3  11 22  0.43    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  127 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  10.78u 0.07s 10.85t   Elapsed:  00:00:09
  Total cpu time:  10.78u 0.07s 10.85t   Elapsed:  00:00:12
  Start:  Fri May 10 21:01:14 2013   End:  Fri May 10 21:01:26 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
