Query 033265
Match_columns 123
No_of_seqs 76 out of 78
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 19:38:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033265.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033265hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fk5a_ a.52.1.1 (A:) Plant no 19.7 40 0.0029 20.8 2.9 33 49-86 4-38 (93)
2 d1mida_ a.52.1.1 (A:) Plant no 16.0 55 0.004 20.0 2.9 33 49-86 3-36 (91)
3 d1knya1 a.24.16.1 (A:126-253) 7.9 1E+02 0.0073 21.0 2.2 30 53-82 73-106 (128)
4 d2q22a1 d.365.1.1 (A:8-138) Un 6.5 1.3E+02 0.0098 19.9 2.3 42 62-106 34-83 (131)
5 d1tdja3 d.58.18.2 (A:424-514) 5.9 1E+02 0.0073 19.2 1.3 17 100-116 17-33 (91)
6 d1tdja2 d.58.18.2 (A:336-423) 5.4 96 0.007 19.0 0.9 16 100-115 10-25 (88)
7 d1k8rb_ d.15.1.5 (B:) Protein 5.3 1.1E+02 0.0082 19.6 1.2 17 53-69 14-30 (95)
8 d1k8ib2 d.19.1.1 (B:1-94) Clas 4.6 1.1E+02 0.0077 19.8 0.7 10 29-38 64-73 (94)
9 d1p4oa_ d.144.1.7 (A:) Insulin 4.1 2.5E+02 0.018 19.2 2.5 33 60-93 241-275 (308)
10 d1tl2a_ b.67.1.1 (A:) Tachylec 3.9 29 0.0021 26.0 -3.0 35 67-102 56-97 (235)
No 1
>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}
Probab=19.69 E-value=40 Score=20.76 Aligned_cols=33 Identities=15% Similarity=0.563 Sum_probs=20.3
Q ss_pred hhhhhhcCcchHHHHHHHHHhccc-cccc-chHHHHHhhh
Q 033265 49 CLKAYQELNKCSAVIYQFFFTGMA-NVAP-CCGAIETVTR 86 (123)
Q Consensus 49 CWssL~~l~gC~~EI~~fflnG~~-~IGp-CC~AI~~I~~ 86 (123)
|=..+.++-.|. .|++|.. .-.+ ||.+++.+-+
T Consensus 4 C~~v~~~l~pCl-----~Yltg~~~~Ps~~CC~gv~~l~~ 38 (93)
T d1fk5a_ 4 CGQVASAIAPCI-----SYARGQGSGPSAGCCSGVRSLNN 38 (93)
T ss_dssp HHHHHHHHGGGH-----HHHTTCSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhH-----HHHhCCCCCCCCchhHHHHHHHH
Confidence 334444444553 3677776 4455 9999998753
No 2
>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=16.00 E-value=55 Score=20.02 Aligned_cols=33 Identities=15% Similarity=0.540 Sum_probs=20.5
Q ss_pred hhhhhhcCcchHHHHHHHHHhccccccc-chHHHHHhhh
Q 033265 49 CLKAYQELNKCSAVIYQFFFTGMANVAP-CCGAIETVTR 86 (123)
Q Consensus 49 CWssL~~l~gC~~EI~~fflnG~~~IGp-CC~AI~~I~~ 86 (123)
|=+.+..+-.|. .|++|.....+ ||.+++.+..
T Consensus 3 C~~v~~~l~pCl-----~Yl~g~~~P~~~CC~gv~~L~~ 36 (91)
T d1mida_ 3 CGQVDSKMKPCL-----TYVQGGPGPSGECCNGVRDLHN 36 (91)
T ss_dssp HHHHHHHHGGGH-----HHHTTCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhH-----HHHcCCCCCCcchhhhHHHHHH
Confidence 334444444554 35677666666 9999988753
No 3
>d1knya1 a.24.16.1 (A:126-253) Kanamycin nucleotidyltransferase (KNTase), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=7.93 E-value=1e+02 Score=20.99 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=22.0
Q ss_pred hhcCcchHHHHHHHHHhccc-cc---ccchHHHH
Q 033265 53 YQELNKCSAVIYQFFFTGMA-NV---APCCGAIE 82 (123)
Q Consensus 53 L~~l~gC~~EI~~fflnG~~-~I---GpCC~AI~ 82 (123)
+-+.++=+.|..+.|.+|+- .. =.||.++-
T Consensus 73 lp~~p~g~d~l~~~vm~G~L~~~~~i~~~CE~~w 106 (128)
T d1knya1 73 QSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFW 106 (128)
T ss_dssp SSSCCTTHHHHHHHHHHTBCCCHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHcccccchHHHHHHHHHHH
Confidence 34566778999999999998 33 22888763
No 4
>d2q22a1 d.365.1.1 (A:8-138) Uncharacterized protein Ava3019 {Anabaena variabilis [TaxId: 1172]}
Probab=6.45 E-value=1.3e+02 Score=19.93 Aligned_cols=42 Identities=5% Similarity=-0.030 Sum_probs=25.9
Q ss_pred HHHHHHHhccc-cccc---ch----HHHHHhhhcCCCCCCCCCCCCCCCccch
Q 033265 62 VIYQFFFTGMA-NVAP---CC----GAIETVTRKCAWPSTLPWFGYTPQQSNI 106 (123)
Q Consensus 62 EI~~fflnG~~-~IGp---CC----~AI~~I~~~C~WP~M~~~~gFtp~e~~~ 106 (123)
|+..-+.+-.- .||- ++ .|++.+.++.+|+.++.. .+.++++
T Consensus 34 eL~~~~~~adw~tiGImA~s~~~Ai~ALrs~~~~~~~~~~~d~---~~~~G~V 83 (131)
T d2q22a1 34 ALILITKLSDYQILGICADTADEGLLAMKTYSHALGYEVPIDL---PVVEGPV 83 (131)
T ss_dssp HHHHHHHTSSEEEEEEEESSHHHHHHHHHHHHHHTTCCCC-CC---CCCSSSE
T ss_pred HHHHHHHhCCcEEEEEecCCHHHHHHHHHHHHHHhCCCccCCC---CCCCCcE
Confidence 44444444433 5555 33 478889999999988664 4555554
No 5
>d1tdja3 d.58.18.2 (A:424-514) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=5.94 E-value=1e+02 Score=19.17 Aligned_cols=17 Identities=12% Similarity=0.411 Sum_probs=14.3
Q ss_pred CCCccchHHhhhhhcCC
Q 033265 100 TPQQSNIFLSYCRAISP 116 (123)
Q Consensus 100 tp~e~~~LkgyC~~~~p 116 (123)
.||.|.-|+.+|+..++
T Consensus 17 iPErpGal~~Fl~~l~~ 33 (91)
T d1tdja3 17 FPESPGALLRFLNTLGT 33 (91)
T ss_dssp CCCCTTHHHHHHHHHCS
T ss_pred CCCCccHHHHHHHHhCC
Confidence 58999999999988643
No 6
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=5.40 E-value=96 Score=19.04 Aligned_cols=16 Identities=25% Similarity=0.839 Sum_probs=13.9
Q ss_pred CCCccchHHhhhhhcC
Q 033265 100 TPQQSNIFLSYCRAIS 115 (123)
Q Consensus 100 tp~e~~~LkgyC~~~~ 115 (123)
.||.|.-|+.+|+..+
T Consensus 10 iPErpGaf~~F~~~lg 25 (88)
T d1tdja2 10 IPEEKGSFLKFCQLLG 25 (88)
T ss_dssp CCBSSSCSHHHHHTTS
T ss_pred cCCCccHHHHHHHhcC
Confidence 5899999999998764
No 7
>d1k8rb_ d.15.1.5 (B:) Protein kinase byr2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=5.35 E-value=1.1e+02 Score=19.55 Aligned_cols=17 Identities=0% Similarity=-0.230 Sum_probs=13.2
Q ss_pred hhcCcchHHHHHHHHHh
Q 033265 53 YQELNKCSAVIYQFFFT 69 (123)
Q Consensus 53 L~~l~gC~~EI~~ffln 69 (123)
..++.||.+||+.-.|.
T Consensus 14 ~vni~gC~~ai~~~~Lk 30 (95)
T d1k8rb_ 14 AVQSRGDYQKTLAIALK 30 (95)
T ss_dssp EEECCSCHHHHHHHHHH
T ss_pred EEEeccCHHHHHHHHHH
Confidence 67899999997766554
No 8
>d1k8ib2 d.19.1.1 (B:1-94) Class II MHC beta chain, N-terminal domain {Mouse (Mus musculus), H2-DM [TaxId: 10090]}
Probab=4.60 E-value=1.1e+02 Score=19.84 Aligned_cols=10 Identities=40% Similarity=0.258 Sum_probs=7.7
Q ss_pred Ccchhhhhhc
Q 033265 29 SYGLGARLQA 38 (123)
Q Consensus 29 ~~~l~~Rl~~ 38 (123)
..+|..||+.
T Consensus 64 ~~~lvqRl~~ 73 (94)
T d1k8ib2 64 QESLIHRLQN 73 (94)
T ss_dssp CHHHHHHHHH
T ss_pred ChHHHHHHHh
Confidence 4579999984
No 9
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.14 E-value=2.5e+02 Score=19.20 Aligned_cols=33 Identities=18% Similarity=0.504 Sum_probs=23.4
Q ss_pred HHHHHHHHHhccc-cccc-chHHHHHhhhcCCCCCC
Q 033265 60 SAVIYQFFFTGMA-NVAP-CCGAIETVTRKCAWPST 93 (123)
Q Consensus 60 ~~EI~~fflnG~~-~IGp-CC~AI~~I~~~C~WP~M 93 (123)
..|++..+.+|+. .+-+ |-..+..+-.+| |-.-
T Consensus 241 ~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c-l~~~ 275 (308)
T d1p4oa_ 241 NEQVLRFVMEGGLLDKPDNCPDMLFELMRMC-WQYN 275 (308)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH-TCSS
T ss_pred HHHHHHHHHhCCCCCCcccchHHHHHHHHHH-cCCC
Confidence 4567777778877 5555 767888888888 8543
No 10
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=3.88 E-value=29 Score=26.00 Aligned_cols=35 Identities=6% Similarity=0.184 Sum_probs=24.0
Q ss_pred HHhccccccc--chHHHHHhh-----hcCCCCCCCCCCCCCCC
Q 033265 67 FFTGMANVAP--CCGAIETVT-----RKCAWPSTLPWFGYTPQ 102 (123)
Q Consensus 67 flnG~~~IGp--CC~AI~~I~-----~~C~WP~M~~~~gFtp~ 102 (123)
+.+|+.|.|| =|..+.-+. -+|+| +||-.+.|.|+
T Consensus 56 Vr~~~lY~Gp~~s~~nq~wf~~atrIG~ggW-n~FkflffdP~ 97 (235)
T d1tl2a_ 56 VLNDKIYKGTPPTHDNDNWMGRAKKIGNGGW-NQFQFLFFDPN 97 (235)
T ss_dssp EETTEEEEESCCCSTTCCHHHHCEEEECSCG-GGCSEEEECTT
T ss_pred EECCeEEECCCCCcchHHHHHhhhhcccCcc-cceEEEEECCC
Confidence 4567788887 665543332 27878 68888889885
Done!