BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033266
(123 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224133078|ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|222837365|gb|EEE75744.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 221 bits (563), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 112/120 (93%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
MSG +INSVFYA +YHPIQAGSIDGTD PHDNA+ RALLCSSAGLYDP GDPKAIGDP+
Sbjct: 1 MSGRSINSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGDPY 60
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
CT+FVGRLSH T+EDTLRKAMSKYG+VKNLRLVR IVTGASRGYAFVE+ETEREMRRAY+
Sbjct: 61 CTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYK 120
>gi|242045290|ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
gi|241923893|gb|EER97037.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
Length = 437
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/120 (80%), Positives = 109/120 (90%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
MSG ++++VFYA YHPIQAGSIDGTD+ PHDNA+ RAL+CS AGLYDP GDPKA GDP+
Sbjct: 1 MSGGSVSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKASGDPY 60
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
CTVFVGRLS T +DTLRKAMS+YGRVK++RLVRDIVTGASRGYAFVEYET+REMRRAYE
Sbjct: 61 CTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRRAYE 120
>gi|225433837|ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera]
gi|297743756|emb|CBI36639.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/120 (82%), Positives = 108/120 (90%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
MSG+ N+VFYA SYHPIQAGSIDGTD PHDNA+ RALLCSSAGLYDP GDPK IGDP+
Sbjct: 1 MSGSRANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGDPY 60
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
CTVFVG L+H T+EDTL KAMSK+GRVK+LRLVR IVTGAS+GYAFVEYETEREMRRAYE
Sbjct: 61 CTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYE 120
>gi|449459836|ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
Length = 333
Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 110/120 (91%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
MSG+N+N VFYA +YHPIQAGSIDGTDI HDNA+ RALLCSSAGLYDP GDPK GDP+
Sbjct: 1 MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
CT+FVGRLSH T+EDTLR+AMSKYG+VKNLRLVR IVTG+SRGYAFVEYETE+EM+RAY+
Sbjct: 61 CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 120
>gi|356567272|ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
Length = 347
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 103/116 (88%)
Query: 4 NNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTV 63
N+NSVFYA SYHPIQAGSIDGTD+ PHDNA+ RA LCSS GLYDP GDPKA GDP+CT+
Sbjct: 6 KNLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTL 65
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
FV RLS T+ED LRK MSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY
Sbjct: 66 FVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 121
>gi|255577755|ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
gi|223530750|gb|EEF32618.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
Length = 389
Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 105/119 (88%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
M +NSVFYA SYHPIQAGSIDGTDI PHDNAI RA LC SAGLYDPLGDPK IGDP
Sbjct: 1 MRETKVNSVFYAKSYHPIQAGSIDGTDILPHDNAIYRAFLCFSAGLYDPLGDPKVIGDPF 60
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
CT+FVGRLSH T+E+TL KAMSKYG+V+NLRLVRDIVTGASRGYAFVEY TEREMRRAY
Sbjct: 61 CTLFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFVEYGTEREMRRAY 119
>gi|357508099|ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
gi|355499353|gb|AES80556.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
Length = 566
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/115 (81%), Positives = 105/115 (91%)
Query: 5 NINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVF 64
N+NSVFY+ +YHPIQAGSIDGTDI PHDNAI RA LCSS GLYDP GDPKA GDP+CT+F
Sbjct: 7 NLNSVFYSNAYHPIQAGSIDGTDIVPHDNAIFRAQLCSSIGLYDPFGDPKATGDPYCTLF 66
Query: 65 VGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
VGRLS T+E+TLRK MS++G+VKNLRLVRDIVTGASRGYAFVE+ETEREMRRAY
Sbjct: 67 VGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVTGASRGYAFVEFETEREMRRAY 121
>gi|356524599|ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
Length = 358
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 102/116 (87%)
Query: 4 NNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTV 63
N+NSVFYA SYHPIQAGSIDGTD+ PHDNA+ RA LCSS GLYDP GDP+A GDP+CT+
Sbjct: 6 KNLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRAAGDPYCTL 65
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
FV RLS T+ED LRK MSKYGRVKN RLVRDIVTGASRGYAFVEYETEREMRRAY
Sbjct: 66 FVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREMRRAY 121
>gi|293333112|ref|NP_001169404.1| hypothetical protein [Zea mays]
gi|224029143|gb|ACN33647.1| unknown [Zea mays]
gi|414886248|tpg|DAA62262.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea mays]
Length = 483
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 107/120 (89%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
MSG ++++VFYA YHPIQAGSIDGTD+ PHDNA+ RAL+CS AGLYDP GDPKA GDPH
Sbjct: 1 MSGGSVSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKASGDPH 60
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
TVFVGRLS T +DTLRKAMS+YGRVK++RLVRDIVTGASRGYAFVEYET+REM RAYE
Sbjct: 61 RTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMHRAYE 120
>gi|115480119|ref|NP_001063653.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|50725348|dbj|BAD34420.1| ribonucleoprotein antigen-like [Oryza sativa Japonica Group]
gi|113631886|dbj|BAF25567.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|215704450|dbj|BAG93884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641906|gb|EEE70038.1| hypothetical protein OsJ_29992 [Oryza sativa Japonica Group]
Length = 375
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 92/112 (82%), Positives = 103/112 (91%)
Query: 9 VFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRL 68
VFYA YHPIQAGSIDGTD+ PHDNA+ RALLCS+AGLYDP GDPKA GDP+CTVFVGRL
Sbjct: 13 VFYAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKATGDPYCTVFVGRL 72
Query: 69 SHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
S +T ++TLRK MS+YGRVK++RLVRDIVTGASRGYAFVEYET+REMRRAYE
Sbjct: 73 SRYTDDETLRKEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRRAYE 124
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
Query: 3 GNNI-NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHC 61
GNN+ N VFYA SYHPIQAGSIDGTD+ PHDN + RALLC +AGLYDP GD KA+GDP+C
Sbjct: 5 GNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYC 64
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+FVGRLSH T+EDTLR+ MSKYGR+KNLRLVR IVTGASRGY FVEYETE+EM RAYE
Sbjct: 65 TLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYE 123
>gi|357154271|ref|XP_003576727.1| PREDICTED: uncharacterized protein LOC100823301 [Brachypodium
distachyon]
Length = 416
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/118 (76%), Positives = 103/118 (87%)
Query: 3 GNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCT 62
G + +VFYA YHPIQAGSIDGTD+ PHDNA+ RALLCS AGLYDP GDPKA G+P+
Sbjct: 6 GGSAAAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALLCSGAGLYDPFGDPKATGEPYHM 65
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
VFVG LS FT ++TLRKAMS+YGRVK++RLVRDIVTGASRGYAFVEYET++EMRRAYE
Sbjct: 66 VFVGHLSRFTGDETLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDKEMRRAYE 123
>gi|218202449|gb|EEC84876.1| hypothetical protein OsI_32022 [Oryza sativa Indica Group]
Length = 385
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 103/123 (83%), Gaps = 11/123 (8%)
Query: 9 VFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRL 68
VFYA YHPIQAGSIDGTD+ PHDNA+ RALLCS+AGLYDP GDPKA GDP+CTVFVGRL
Sbjct: 12 VFYAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKATGDPYCTVFVGRL 71
Query: 69 SHFTSEDTLRK-----------AMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
S +T ++TLRK MS+YGRVK++RLVRDIVTGASRGYAFVEYET+REMRR
Sbjct: 72 SRYTDDETLRKFLFLVVYVREQEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRR 131
Query: 118 AYE 120
AYE
Sbjct: 132 AYE 134
>gi|297824313|ref|XP_002880039.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
gi|297325878|gb|EFH56298.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 102/119 (85%), Gaps = 1/119 (0%)
Query: 3 GNNI-NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHC 61
GNN+ N V YA SYHPIQAGSIDGTD+ PHDN + RALLC +AGL DP GD KAIGDP+C
Sbjct: 5 GNNVVNKVLYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLCDPSGDSKAIGDPYC 64
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+FVGRLSH T+EDT+R+ MSKYG +KNLRLVR IVTGASRGYAFVEYETE+EM AYE
Sbjct: 65 TLFVGRLSHHTTEDTIREVMSKYGWIKNLRLVRHIVTGASRGYAFVEYETEKEMLCAYE 123
>gi|2289001|gb|AAB64330.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
Length = 292
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/119 (75%), Positives = 100/119 (84%), Gaps = 7/119 (5%)
Query: 3 GNNI-NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHC 61
GNN+ N VFYA SYHPIQAGSIDGTD+ PHDN + RALL YDP GD KA+GDP+C
Sbjct: 5 GNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALL------YDPSGDSKAVGDPYC 58
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+FVGRLSH T+EDTLR+ MSKYGR+KNLRLVR IVTGASRGY FVEYETE+EM RAYE
Sbjct: 59 TLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYE 117
>gi|168024474|ref|XP_001764761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684055|gb|EDQ70460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/117 (73%), Positives = 98/117 (83%)
Query: 4 NNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTV 63
NN+N VFYA SYHPIQAGSIDGTDI HDN + RALL S+ GLYDPLGDP A GDP+C++
Sbjct: 3 NNVNGVFYATSYHPIQAGSIDGTDITAHDNGVYRALLASTTGLYDPLGDPNAKGDPYCSL 62
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVGRLS T E +L KAMSK+GR+K+LRLVR IVTGAS GYAFVE+ETE+EM AYE
Sbjct: 63 FVGRLSTQTDEKSLHKAMSKFGRIKSLRLVRHIVTGASCGYAFVEFETEKEMYMAYE 119
>gi|302792637|ref|XP_002978084.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
gi|302826427|ref|XP_002994691.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300137142|gb|EFJ04246.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300154105|gb|EFJ20741.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
Length = 189
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 94/130 (72%), Gaps = 14/130 (10%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
+ VFYA YHPIQAGSIDGTDI PHDN I RA++ + GLYDP GD KA+GDP+ T+FVG
Sbjct: 6 SEVFYATVYHPIQAGSIDGTDIVPHDNGIYRAMIARTTGLYDPTGDAKALGDPYRTLFVG 65
Query: 67 RLSHFTSEDTLRKA--------------MSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
RLS T+E+TLR+A MSKYG VK++RLVR IVTGASRGYAFVE+E E
Sbjct: 66 RLSRDTTEETLREATFVLHELFDLPLQVMSKYGTVKSMRLVRHIVTGASRGYAFVEFENE 125
Query: 113 REMRRAYEVC 122
++ AYE
Sbjct: 126 KDFLHAYEAA 135
>gi|302766473|ref|XP_002966657.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
gi|300166077|gb|EFJ32684.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
Length = 260
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
+ VFYA YHPIQAGSIDGTDI PHDN I RA++ + GLYDP GD KA+GDP+ T+FVG
Sbjct: 6 SEVFYATVYHPIQAGSIDGTDIVPHDNGIYRAMIARTTGLYDPTGDAKALGDPYRTLFVG 65
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
RLS T+E+TLR+A Y ++ + R+ VTGASRGYAFVE+E E++ AYE
Sbjct: 66 RLSRDTTEETLREASLFY--TLSICVSRNAVTGASRGYAFVEFENEKDFLHAYEAA 119
>gi|149605642|ref|XP_001519834.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ornithorhynchus anatinus]
Length = 275
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L Y P + GDPH T+FVGRL+
Sbjct: 8 AKDYDPLKAGSIDGTDEEPHDRAIWRAMLAR----YIP--NKGVTGDPHLTLFVGRLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TTEEKLKETFSRYGDIRKLRLVRDLVTGFSKGYAFIEYKEERSLLKAY 109
>gi|432897351|ref|XP_004076429.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oryzias latipes]
Length = 220
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD+ PHD A+ RA+ + Y P + +GDP TVFV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDVEPHDRAVWRAM----SARYKP--NKGVVGDPLLTVFVARLNPQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
TSE+ L++ SKYG +K LRLVRDIVTG S+GY F+EY+ ER + RA
Sbjct: 62 TSEEKLQQIFSKYGDIKRLRLVRDIVTGFSKGYGFIEYKEERSLTRA 108
>gi|156387741|ref|XP_001634361.1| predicted protein [Nematostella vectensis]
gi|156221443|gb|EDO42298.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
N A YHP+QAGSIDGTD PHDNA+ RA+ Y P + + GD CT+F+G
Sbjct: 6 NWTPLAKKYHPLQAGSIDGTDQVPHDNAVWRAMQAK----YKP--NKQVAGDAGCTLFIG 59
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
RLS T +TL +A SKYG V+N RLVRD VTG SRGYAFVE++ + + AY
Sbjct: 60 RLSKETRAETLVEAFSKYGEVENCRLVRDFVTGFSRGYAFVEFKERWDAKTAY 112
>gi|449279308|gb|EMC86943.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Columba
livia]
Length = 254
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L Y P + GDPH T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAIWRAMLAR----YVP--NKGVTGDPHLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++A S+YG ++ +RLVRD+VTG S+GYAF+EY+ ER + +A+
Sbjct: 62 TTEEKLKEAFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAH 109
>gi|126324312|ref|XP_001375255.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Monodelphis domestica]
Length = 261
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L Y P + GDPH T+FVGRL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAIWRAMLAR----YVP--NKGVSGDPHLTLFVGRLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L+ S+YG ++ LRLVRD+VTG S+ YAF+EY+ ER + +AY
Sbjct: 62 TTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYKEERSLLKAY 109
>gi|444724897|gb|ELW65483.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Tupaia
chinensis]
Length = 246
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L A + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAIWRAMLARYAP------NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALIKAY 109
>gi|332840730|ref|XP_001169924.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pan troglodytes]
Length = 251
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 1 MSGNNINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDP 59
M N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 1 MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDP 54
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 55 LLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 114
>gi|31077198|ref|NP_851030.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b
[Homo sapiens]
gi|441630253|ref|XP_004089520.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|52790429|gb|AAH09622.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|55249546|gb|AAH47678.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|62739916|gb|AAH93671.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|85567339|gb|AAI11956.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|312150806|gb|ADQ31915.1| U11/U12 snRNP 35K [synthetic construct]
Length = 251
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 1 MSGNNINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDP 59
M N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 1 MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDP 54
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 55 LLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 114
>gi|426374580|ref|XP_004054148.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Gorilla gorilla gorilla]
Length = 251
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 1 MSGNNINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDP 59
M N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 1 MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDP 54
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 55 LLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 114
>gi|291414264|ref|XP_002723378.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)
[Oryctolagus cuniculus]
Length = 246
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAFVEY+ ER + RAY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFVEYKEERALLRAY 109
>gi|350536563|ref|NP_001232485.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128442|gb|ACH44940.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128443|gb|ACH44941.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128444|gb|ACH44942.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128445|gb|ACH44943.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
Length = 265
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L Y P + +GDPH T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAIWRAMLAR----YVP--NKGVMGDPHLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG ++ +RLVRD+VTG S+GYAF+EY+ ER + +A+
Sbjct: 62 TTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAH 109
>gi|348518549|ref|XP_003446794.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oreochromis niloticus]
Length = 237
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD+ PHD A+ RA+ Y P + +GDP T+FV RL+
Sbjct: 8 AKVYDPLKAGSIDGTDVEPHDRAVWRAM----GARYKP--NKGVVGDPLLTLFVSRLNPQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+ED L K SKYG ++ LRLVRDIVTG S+GYAF+EY+ ER + RA
Sbjct: 62 TTEDKLHKVFSKYGDIQRLRLVRDIVTGFSKGYAFIEYKEERSVVRA 108
>gi|351698560|gb|EHB01479.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Heterocephalus glaber]
Length = 246
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED LR+ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLREVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAY 109
>gi|403292250|ref|XP_003937166.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Saimiri boliviensis boliviensis]
Length = 252
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 7/120 (5%)
Query: 1 MSGNNINS-VFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDP 59
M N+N V A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 1 MKPANMNDWVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDP 54
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+E++ ER + +AY
Sbjct: 55 LLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAY 114
>gi|327276115|ref|XP_003222816.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Anolis carolinensis]
Length = 260
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 75/108 (69%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDPH T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAVWRAMLAR----YVP--NKGVSGDPHLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+ED L++ S+YG ++ +RLVRD+VTG S+GYAFVEY+ ER + +A+
Sbjct: 62 TTEDKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFVEYKEERALIKAH 109
>gi|426374582|ref|XP_004054149.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 3 [Gorilla gorilla gorilla]
Length = 251
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|355564803|gb|EHH21303.1| hypothetical protein EGK_04324, partial [Macaca mulatta]
gi|355759389|gb|EHH61611.1| hypothetical protein EGM_19603, partial [Macaca fascicularis]
Length = 247
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 7/116 (6%)
Query: 5 NINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTV 63
N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+
Sbjct: 1 NMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTL 54
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 55 FVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 110
>gi|395745038|ref|XP_002823985.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Pongo abelii]
Length = 251
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|402888045|ref|XP_003907387.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Papio anubis]
Length = 254
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|109099573|ref|XP_001089715.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Macaca mulatta]
Length = 246
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|432094892|gb|ELK26300.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Myotis
davidii]
Length = 246
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAQ----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + RAY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLLRAY 109
>gi|50756329|ref|XP_415114.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Gallus gallus]
Length = 263
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 75/108 (69%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L Y P + GDPH T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAIWRAMLAR----YVP--NKGVTGDPHLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG ++ +RLVRD+VTG S+GYAF+EY+ ER + +A+
Sbjct: 62 TTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAH 109
>gi|296213226|ref|XP_002753185.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Callithrix jacchus]
Length = 251
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 7/120 (5%)
Query: 1 MSGNNINS-VFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDP 59
M N+N V A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 1 MKPANMNDWVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDP 54
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+E++ ER + +AY
Sbjct: 55 LLTLFVTRLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAY 114
>gi|13027642|ref|NP_073208.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform a
[Homo sapiens]
gi|297693357|ref|XP_002823986.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pongo abelii]
gi|332254325|ref|XP_003276277.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Nomascus leucogenys]
gi|395745035|ref|XP_003778201.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pongo abelii]
gi|441630256|ref|XP_004089521.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|74754517|sp|Q16560.1|U1SBP_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein;
Short=U11/U12-35K; AltName: Full=Protein HM-1; AltName:
Full=U1 snRNP-binding protein homolog
gi|1174217|gb|AAA86654.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|1174219|gb|AAA86655.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|32450706|gb|AAH54034.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|48427632|tpg|DAA05495.1| TPA_exp: U11/U12 snRNP 35K [Homo sapiens]
gi|119618818|gb|EAW98412.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|119618820|gb|EAW98414.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|158261277|dbj|BAF82816.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|410047484|ref|XP_003952396.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan troglodytes]
Length = 246
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|119618819|gb|EAW98413.1| U11/U12 snRNP 35K, isoform CRA_b [Homo sapiens]
Length = 278
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|426374578|ref|XP_004054147.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Gorilla gorilla gorilla]
Length = 246
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 109
>gi|397481850|ref|XP_003812150.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan paniscus]
Length = 307
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
Query: 3 GNNINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHC 61
N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 59 AENMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLL 112
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 113 TLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 170
>gi|114647660|ref|XP_509463.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 4 [Pan troglodytes]
Length = 307
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
Query: 3 GNNINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHC 61
N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP
Sbjct: 59 AENMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLL 112
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+FV RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 113 TLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAY 170
>gi|326929594|ref|XP_003210944.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Meleagris gallopavo]
Length = 265
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 75/108 (69%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDPH T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAVWRAMLAR----YVP--NKGVTGDPHLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG ++ +RLVRD+VTG S+GYAF+EY+ ER + +A+
Sbjct: 62 TTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAH 109
>gi|224161968|ref|XP_002188436.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Taeniopygia guttata]
Length = 265
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 75/108 (69%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA++ Y P + GDPH T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAIWRAMMAR----YVP--NKGVTGDPHLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG ++ +RLVRD+VTG S+GYAF+EY+ ER + +A+
Sbjct: 62 TTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAH 109
>gi|335301144|ref|XP_003359137.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like isoform 1 [Sus scrofa]
Length = 246
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
+ V A Y P++AGSIDGTD PHD AI RA+L Y P + GDP T+FV
Sbjct: 3 DWVPIAKEYDPLKAGSIDGTDEDPHDRAIWRAMLAR----YTP--NKGVTGDPLLTLFVA 56
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
RL+ T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 57 RLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLLKAY 109
>gi|73995146|ref|XP_534648.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Canis lupus familiaris]
Length = 246
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGLSKGYAFIEYKEERSLIKAY 109
>gi|403292252|ref|XP_003937167.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Saimiri boliviensis boliviensis]
Length = 247
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
+ V A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV
Sbjct: 3 DWVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVA 56
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+E++ ER + +AY
Sbjct: 57 RLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAY 109
>gi|410976458|ref|XP_003994637.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Felis catus]
Length = 246
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAIWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAY 109
>gi|301112318|ref|XP_002905238.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
gi|262095568|gb|EEY53620.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
Length = 204
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 10 FYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLS 69
++A Y P+Q GSIDGTD PHD + RA+ +D DP+ GDP+ T+FV RLS
Sbjct: 39 WFAEEYDPVQIGSIDGTDTTPHDKGLVRAMNAR----FDATKDPQIHGDPYATLFVARLS 94
Query: 70 HFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E T+ + S YG ++ LRLVRD T S+GYAFVE+E ER+ RAY
Sbjct: 95 FSTAESTILQFFSNYGPIRRLRLVRDKKTDQSKGYAFVEFEHERDFGRAY 144
>gi|395513787|ref|XP_003761104.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Sarcophilus harrisii]
Length = 263
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PH AI RA+L Y P + GDPH T+FVGRL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHXRAIWRAMLAR----YVP--NKGVSGDPHLTLFVGRLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L+ S+YG ++ LRLVRD+VTG S+ YAF+EY ER + +AY
Sbjct: 62 TTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYREERSLLKAY 109
>gi|218847772|ref|NP_001136383.1| small nuclear ribonucleoprotein 35kDa (U11/U12) [Xenopus (Silurana)
tropicalis]
gi|195539787|gb|AAI67878.1| Unknown (protein for MGC:135224) [Xenopus (Silurana) tropicalis]
Length = 264
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDPH T++V RLS
Sbjct: 8 AKDYDPLKAGSIDGTDEEPHDRAVLRAILAR----YVP--NKGVIGDPHLTLYVARLSQQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG +K +RLVRD +TG S+GYAF+EY+ E + +A+
Sbjct: 62 TTEEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIEYKQENAIMKAH 109
>gi|440898320|gb|ELR49845.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, partial
[Bos grunniens mutus]
Length = 246
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 7/116 (6%)
Query: 5 NINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTV 63
N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+
Sbjct: 1 NMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTL 54
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
FV RL+ T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 55 FVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAY 110
>gi|426247194|ref|XP_004017371.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Ovis aries]
Length = 245
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAY 109
>gi|348554281|ref|XP_003462954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cavia porcellus]
Length = 246
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T ED LR+ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +A+
Sbjct: 62 TKEDKLREVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAH 109
>gi|296213228|ref|XP_002753186.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Callithrix jacchus]
gi|390468332|ref|XP_003733920.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Callithrix jacchus]
Length = 246
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
+ V A Y P++AGSIDGTD PHD A+ RA+L Y P + IGDP T+FV
Sbjct: 3 DWVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVIGDPLLTLFVT 56
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+E++ ER + +AY
Sbjct: 57 RLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAY 109
>gi|431912140|gb|ELK14278.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Pteropus
alecto]
Length = 246
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L A + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYAP------NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLLKAY 109
>gi|395846781|ref|XP_003796072.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Otolemur garnettii]
Length = 246
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
+ V A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV
Sbjct: 3 DWVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVA 56
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
RL+ T ED L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 57 RLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSVIKAY 109
>gi|115495605|ref|NP_001069024.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Bos taurus]
gi|122144781|sp|Q1LZH0.1|U1SBP_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|94534832|gb|AAI16003.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
gi|296478494|tpg|DAA20609.1| TPA: small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
Length = 245
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAY 109
>gi|281343806|gb|EFB19390.1| hypothetical protein PANDA_000935 [Ailuropoda melanoleuca]
Length = 247
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 7/116 (6%)
Query: 5 NINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTV 63
N+N A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+
Sbjct: 1 NMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTL 54
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
FV RL+ T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 55 FVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAY 110
>gi|71834616|ref|NP_001025412.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Danio
rerio]
gi|123916690|sp|Q4KMD3.1|U1SBP_DANRE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|68533621|gb|AAH98619.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Danio rerio]
Length = 208
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD+ PHD + RA+L Y P + GDP T+FV RL+
Sbjct: 7 AKVYDPLKAGSIDGTDVEPHDAGVWRAMLAR----YKP--NRGVCGDPDLTLFVARLNPQ 60
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ LR SK+G ++ LRLVRD+VTG S+ YAF+EY+ ER ++RA+
Sbjct: 61 TTEEKLRDVFSKFGDIRRLRLVRDVVTGFSKRYAFIEYKEERSLKRAW 108
>gi|301754651|ref|XP_002913143.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ailuropoda melanoleuca]
Length = 246
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAY 109
>gi|149720723|ref|XP_001498122.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Equus caballus]
Length = 246
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L A + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYAP------NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAY 109
>gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus]
Length = 179
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAY 109
>gi|355721016|gb|AES07125.1| small nuclear ribonucleoprotein 35kDa [Mustela putorius furo]
Length = 245
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YTP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAY 109
>gi|147903467|ref|NP_001090410.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Xenopus
laevis]
gi|123905237|sp|Q05AT9.1|U1SBP_XENLA RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|116063426|gb|AAI23362.1| MGC154877 protein [Xenopus laevis]
Length = 272
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDPH T+FV RLS
Sbjct: 8 AKKYDPLKAGSIDGTDEEPHDRAVLRAMLSR----YVP--NKGVTGDPHLTLFVSRLSPQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L++ S+YG +K +RLVRD +TG S+GYAF+EY+ E + +A+
Sbjct: 62 TTEEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIEYKQENAIMKAH 109
>gi|62078981|ref|NP_001014149.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Rattus
norvegicus]
gi|81910233|sp|Q5U1W5.1|U1SBP_RAT RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|55562850|gb|AAH86435.1| U11/U12 snRNP 35K [Rattus norvegicus]
Length = 244
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNSQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAY 109
>gi|354496379|ref|XP_003510304.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cricetulus griseus]
gi|344258842|gb|EGW14946.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cricetulus
griseus]
Length = 246
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAY 109
>gi|21624627|ref|NP_083808.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Mus
musculus]
gi|81916986|sp|Q9D384.1|U1SBP_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|12857850|dbj|BAB31127.1| unnamed protein product [Mus musculus]
gi|27695288|gb|AAH43031.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|34849818|gb|AAH58361.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|148687639|gb|EDL19586.1| RIKEN cDNA 6330548G22 [Mus musculus]
Length = 244
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAY 109
>gi|443707095|gb|ELU02850.1| hypothetical protein CAPTEDRAFT_133662 [Capitella teleta]
Length = 218
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 6/95 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y P++AGSIDGTD PHDN I RAL Y P + G+P CTVFVGRL+H T+E
Sbjct: 11 YDPLRAGSIDGTDADPHDNGIVRALNAK----YKP--NKGVRGNPECTVFVGRLNHSTTE 64
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+TL + +YG ++++RL+RDIVTG S+GYAFVEY
Sbjct: 65 ETLEEQFKRYGNIEHIRLIRDIVTGFSQGYAFVEY 99
>gi|344297375|ref|XP_003420374.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Loxodonta africana]
Length = 259
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLNAY 109
>gi|149063260|gb|EDM13583.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
gi|149063261|gb|EDM13584.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
Length = 244
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+L Y P + GDP T+FV RL+
Sbjct: 8 AKEYDPLKAGSIDGTDEDPHDRAVWRAMLAR----YVP--NKGVTGDPLLTLFVARLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T E+ L++ S+YG ++ LRLVRD+VTG S+GYAF+EY+ ER + +AY
Sbjct: 62 TKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAY 109
>gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD+ PHD A+ RA+ Y P + +GDP T+FV RL+
Sbjct: 8 AKVYDPLKAGSIDGTDVEPHDRAVWRAMGVR----YKP--NKGVVGDPLLTLFVSRLNPQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+ED L + SKYG ++ LRLVRDIVTG S+ YAFVEY+ ER + RA
Sbjct: 62 TTEDKLYEVFSKYGDIRRLRLVRDIVTGFSKRYAFVEYKEERSVVRA 108
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 10/105 (9%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y I+AGSIDGTD PHD+AI L+DP DP+ G TVFVGRL T+E
Sbjct: 15 YDAIRAGSIDGTDPEPHDHAI----------LHDPSQDPQIRGSARRTVFVGRLDFVTNE 64
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+TLR ++G +++LRLVRDIVTG S+GYAFVEYE E + AY
Sbjct: 65 ETLRTTFERFGPIRHLRLVRDIVTGKSKGYAFVEYEHESDAHAAY 109
>gi|395529739|ref|XP_003766966.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Sarcophilus harrisii]
Length = 283
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD AI RA+ Y P + GDP+ T+FVGRL+
Sbjct: 8 AKEYDPLKAGSIDGTDEEPHDRAIWRAIRAR----YVP--NKGVSGDPYLTLFVGRLNLQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E+ L+ S+YG ++ LRLVRD+VTG S+ YAF+EY E+ + +AY
Sbjct: 62 TTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYREEQSLLKAY 109
>gi|91086635|ref|XP_966565.1| PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum]
gi|270009757|gb|EFA06205.1| hypothetical protein TcasGA2_TC009054 [Tribolium castaneum]
Length = 194
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
+A Y PI+ GSIDGTD PHD I RAL Y P + G P CT+FV RLS
Sbjct: 12 FAKYYDPIKIGSIDGTDTEPHDKGIVRALNSE----YHP--NRHVKGRPECTIFVSRLSL 65
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T++DT++ SKYG ++ RLV+DIVTG +GYAF+EYE E + AY
Sbjct: 66 KTTKDTIKDIFSKYGPLRRFRLVKDIVTGMPKGYAFIEYENELDAEEAY 114
>gi|291228234|ref|XP_002734084.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)-like
[Saccoglossus kowalevskii]
Length = 192
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 8/107 (7%)
Query: 13 GSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAI-GDPHCTVFVGRLSHF 71
+Y P++AGSIDGTD PHD AI RA+ + Y P KAI GD TVFV RL+
Sbjct: 12 NAYDPLKAGSIDGTDDIPHDKAIQRAM----SAKYKP---NKAITGDAEKTVFVARLNLN 64
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+E+T+ K S+YG +K L+LVRDIVTG S+GYAFVEY +++ RA
Sbjct: 65 TTEETIEKTFSRYGEIKRLKLVRDIVTGFSKGYAFVEYCSQKSAERA 111
>gi|390358352|ref|XP_001182912.2| PREDICTED: uncharacterized protein LOC753629 [Strongylocentrotus
purpuratus]
Length = 413
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A YHP+ AGSIDGTD PHD A+ RA+ S Y P P DPH T+FV RL+
Sbjct: 8 ARVYHPLTAGSIDGTDTRPHDRAVERAIKAS----YVP---PSVDNDPHLTLFVARLNPE 60
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
T+E TLRK SKYG +K + L+RD+VTG S+ YAF+E+
Sbjct: 61 TTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEF 98
>gi|260790715|ref|XP_002590387.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
gi|229275579|gb|EEN46398.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
Length = 213
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 10/114 (8%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y+P++AGSIDGTD+ PHD A+ RA+ Y P + + GDP CT+FV L+
Sbjct: 13 ARVYNPLRAGSIDGTDLDPHDRAVIRAMDAK----YRP--NKQVKGDPRCTLFVSNLNPK 66
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM----RRAYEV 121
T+ED+L K SK+G + RLVRDIVTG S+ YAF+EY E+ M R+AY++
Sbjct: 67 TTEDSLEKVFSKFGDLVRTRLVRDIVTGYSKRYAFIEYVDEKSMWHAHRKAYKM 120
>gi|410915752|ref|XP_003971351.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Takifugu rubripes]
Length = 223
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD+ PHD A+ RA+ Y P + +GD T+FV RL+
Sbjct: 8 AKVYDPLKAGSIDGTDVEPHDRAVWRAIGVR----YKP--NKGVVGDALLTLFVSRLNPQ 61
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+E+ L + SKYG ++ LRLVRDIVTG S+ YAFVEY+ ER + RA
Sbjct: 62 TTEEKLYEVFSKYGDIRRLRLVRDIVTGFSKRYAFVEYKEERSVVRA 108
>gi|392876104|gb|AFM86884.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+ A Y P + GDPH T+FV RL+
Sbjct: 9 AQHYAPLKAGSIDGTDAEPHDRAVSRAI----AANYRP--NKGVSGDPHLTLFVARLNPQ 62
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E LR S++G V+ LRLVRD+VTG S+ Y F+EY ER + +A+
Sbjct: 63 TTEQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREERSLVKAH 110
>gi|387914692|gb|AFK10955.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P++AGSIDGTD PHD A+ RA+ + Y P + GDPH T+FV RL+
Sbjct: 9 AQHYAPLKAGSIDGTDAEPHDRAVSRAIAAN----YRP--NKGVSGDPHLTLFVARLNPQ 62
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+E LR S++G V+ LRLVRD+VTG S+ Y F+EY ER + +A+
Sbjct: 63 TTEQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREERSLVKAH 110
>gi|221126097|ref|XP_002166019.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Hydra magnipapillata]
Length = 218
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 6/107 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A YHP+ AGSIDGTD PHD A+ RA S +Y P + K GDP T+ V LS
Sbjct: 25 ATFYHPLMAGSIDGTDTVPHDKAVIRA----SKSVYKP--NKKVTGDPRKTIMVRHLSLT 78
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+E T+++ ++G ++ RLVRDI+TG SR YAF+EY ER+ R A
Sbjct: 79 TNESTIKQIFQRFGEIRKCRLVRDIITGNSRCYAFIEYSHERDARHA 125
>gi|357620131|gb|EHJ72437.1| putative U11/U12 snRNP 35K [Danaus plexippus]
Length = 181
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
+Y PI+ GSIDGTD PHD+ I RAL Y P + K GDP+ T+FV RL+ T+
Sbjct: 13 TYDPIKIGSIDGTDTAPHDHGIVRALNSE----YVP--NKKVKGDPNHTIFVARLNPRTT 66
Query: 74 EDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
EDT+ SK+G+V N RLV+DIVTG S+ YAFVEYE
Sbjct: 67 EDTIYSEFSKFGKVINCRLVKDIVTGKSKQYAFVEYE 103
>gi|325180074|emb|CCA14475.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein putative
[Albugo laibachii Nc14]
Length = 224
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 8 SVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGR 67
+V+YA Y P + GSIDGT H HD A+ RA S +DP D GD T+F+GR
Sbjct: 51 TVWYASEYDPSRMGSIDGTGNHFHDKALLRA----SKLHFDPKRDSNIKGDATKTLFIGR 106
Query: 68 LSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
L TS+D + + S YG + ++RLVRDIVT AS+GYAFVEY R RA E
Sbjct: 107 LHSETSQDAIYQLFSSYGPIAHVRLVRDIVTKASKGYAFVEYRDRRHFERALE 159
>gi|390355488|ref|XP_790452.3| PREDICTED: uncharacterized protein LOC585534 [Strongylocentrotus
purpuratus]
Length = 405
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
YHP+ AGSIDGTD PHD A+ RA+ S Y P P DPH T+FV RL+ T+E
Sbjct: 11 YHPLTAGSIDGTDTRPHDRAVERAIKAS----YVP---PSVDNDPHLTLFVARLNPETTE 63
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
TLRK SKYG +K + L+RD+VTG S+ YAF+E+
Sbjct: 64 KTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEF 98
>gi|157114772|ref|XP_001652414.1| splicing factor, putative [Aedes aegypti]
gi|108883567|gb|EAT47792.1| AAEL001131-PA [Aedes aegypti]
Length = 214
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 10 FYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLS 69
F Y PI+ GSIDGTD PHD A+ RA+ S Y P + K +GDP CT+FVGRL+
Sbjct: 26 FARDVYDPIKVGSIDGTDEFPHDRALVRAMNSS----YKP--NRKVVGDPLCTIFVGRLA 79
Query: 70 HFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
E+ RK ++G + RLVRD+VT SRGY FVE+ + RA
Sbjct: 80 PSVDENQFRKLFERFGTIVRCRLVRDVVTELSRGYGFVEFSERKSALRA 128
>gi|193631809|ref|XP_001951817.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Acyrthosiphon pisum]
Length = 300
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y I+AGSIDGTDI PHD I RAL + Y KA G+P T+FVGRLS T+E
Sbjct: 25 YDAIKAGSIDGTDIEPHDAGITRALNSNYKISY------KAKGNPLNTIFVGRLSLDTTE 78
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
L +YG++ LRLV+D++TG S+ YAF+EYET + Y +C
Sbjct: 79 KDLENEFCRYGKMIALRLVKDLITGLSKRYAFIEYETFKMALNTYVLC 126
>gi|242016767|ref|XP_002428900.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Pediculus
humanus corporis]
gi|212513682|gb|EEB16162.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Pediculus
humanus corporis]
Length = 177
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A Y P+ GSIDGTD PHD + RA+ ++ Y D P CTVFVGRL
Sbjct: 7 AIEYDPLAVGSIDGTDTEPHDMGVVRAI---NSEYY---SDTSLSSKPECTVFVGRLHPK 60
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+ED L+ +YGR+K +++DIVTG S+ YAF+EYE E + RAY
Sbjct: 61 VTEDDLKIVFKEYGRIKKCNVIKDIVTGGSKQYAFIEYEKESQADRAY 108
>gi|405972647|gb|EKC37405.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Crassostrea
gigas]
Length = 226
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 20 AGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRK 79
AGSID TD PHD+ I RAL S Y P D GDP+ TVFV RL+ T EDTL
Sbjct: 2 AGSIDRTDTEPHDHGIIRALSSS----YKPNKD--VAGDPNLTVFVSRLNPKTDEDTLES 55
Query: 80 AMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
S +G + +RLVRDI+TG SRGYAFVE++ R RA
Sbjct: 56 QFSYFGEIHKIRLVRDIITGHSRGYAFVEFKEGRSAVRA 94
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y P+Q GSIDGTD PHD A+ RA+ + Y P + K G+P T+F+GRL+H +E
Sbjct: 21 YDPVQVGSIDGTDQVPHDRALIRAINSN----YRP--NRKVKGNPLHTIFIGRLAHSVTE 74
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+ LR + +G + + RLV DIVTG RGYAF+EY E RA E
Sbjct: 75 EQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYSARGEALRAIE 120
>gi|241671842|ref|XP_002411425.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
gi|215504074|gb|EEC13568.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
Length = 278
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
+Y P++AGSIDGTD+ PHD+ + RAL + Y P K DP T+FVGRL+ TS
Sbjct: 13 TYDPLKAGSIDGTDVKPHDHGVVRALEAT----YKPSKYIKT--DPKLTLFVGRLNPTTS 66
Query: 74 EDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
E+ LR+ + YG V++ RLVRDI+TG S+ YAFVEY
Sbjct: 67 EERLREFFAHYGEVRSCRLVRDIITGFSKCYAFVEY 102
>gi|346465439|gb|AEO32564.1| hypothetical protein [Amblyomma maculatum]
Length = 327
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 9/112 (8%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A SY P++AGSIDGTD+ PHD+ I RA+ + DP TVFV RLS
Sbjct: 56 ARSYDPLKAGSIDGTDVKPHDHGIVRAMEATYKT------SKHVKTDPRVTVFVARLSPA 109
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVCG 123
T+EDT+R+ +YG +KN LVRD+VTG S+ YAF+E+ ++ A CG
Sbjct: 110 TNEDTIREXXXQYGDIKNCHLVRDVVTGFSKRYAFIEFYDTKD---ALAACG 158
>gi|405950278|gb|EKC18275.1| Deleted in malignant brain tumors 1 protein [Crassostrea gigas]
Length = 2051
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 20 AGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRK 79
AGSID TD PHD+ I RAL S Y P D GDP+ TVFV RL+ T EDTL
Sbjct: 2 AGSIDRTDTEPHDHGIIRALSSS----YKPNKD--VAGDPNLTVFVSRLNPKTDEDTLES 55
Query: 80 AMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
S +G + +RLVRDI+TG SRGYAFVE++ R RA
Sbjct: 56 QFSYFGEIHKIRLVRDIITGHSRGYAFVEFKEGRSAVRA 94
>gi|339240951|ref|XP_003376401.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
gi|316974884|gb|EFV58354.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
Length = 185
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
Y Y PI+ GS++GT HD A+ RA S Y P + + IGDP T+FVGRLS
Sbjct: 18 YVEKYDPIKVGSVNGTATVAHDRALIRA----SGQHYKP--NERVIGDPKKTLFVGRLSL 71
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T E + + +YG++ +RLVRDIVTG S+ YAFVE++ R+M A+E
Sbjct: 72 DTVEADIHQLFGRYGKIARIRLVRDIVTGMSKRYAFVEFKHRRDMDVAWE 121
>gi|322798651|gb|EFZ20255.1| hypothetical protein SINV_12300 [Solenopsis invicta]
Length = 178
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
N YA Y P++AGSIDGTD PHD AI RALL Y+P + ++ P T+FV
Sbjct: 6 NWSPYAKEYDPLKAGSIDGTDTQPHDKAISRALLMH----YEPPHNLES--KPERTLFVA 59
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
RL ++ L++ SKYG V + +++ D+VTG S+GY FVE ++E E RRA
Sbjct: 60 RLGPKVTKYDLKELFSKYGEVISAKVIVDVVTGLSQGYGFVEMKSEDEARRA 111
>gi|321460332|gb|EFX71375.1| hypothetical protein DAPPUDRAFT_308886 [Daphnia pulex]
Length = 240
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
YA Y+PI+ GS DG DI PHDNAI RA C++ LY P + +P T+F+GRL
Sbjct: 11 YAEHYNPIEVGSKDGKDIEPHDNAIVRA--CNA--LYHP--NHLLTNNPQTTLFIGRLDK 64
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+E L KYG++KN+ +VRD+VTG S+ Y FVE++ + + A
Sbjct: 65 NVTEKDLEDVFIKYGKLKNVTVVRDVVTGYSKRYGFVEFKNKHDCHEA 112
>gi|300121567|emb|CBK22085.2| unnamed protein product [Blastocystis hominis]
Length = 390
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Query: 9 VFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRL 68
+Y Y PI+ GS+DGTDI PHD + RA +D D +P+ T+FVGRL
Sbjct: 11 FWYHEEYDPIRNGSMDGTDIRPHDRGLKRAYGFH----FDSTKDRMICCNPYKTLFVGRL 66
Query: 69 SHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+ T+E+ L + S+YG+++++ L+RD+VTG SRGY FVE+ E + A+
Sbjct: 67 KYDTTEEALYQFFSRYGKLQSVHLIRDLVTGCSRGYGFVEFVHEEDFTSAF 117
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 37 RALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
+ +L + +DP DP A GD + T+FVGRL++ +ED L K M YG+V+ + +VRD
Sbjct: 81 KVVLEKARDEWDPEKDPNAQGDAYKTLFVGRLNYDVTEDDLLKEMESYGKVRQVAVVRDK 140
Query: 97 VTGASRGYAFVEYETEREMRRAY 119
++G RGYAFVE+E ER+MR AY
Sbjct: 141 ISGKPRGYAFVEFEHERDMRAAY 163
>gi|332019065|gb|EGI59597.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Acromyrmex
echinatior]
Length = 194
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 4 NNI--NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHC 61
NN+ N YA Y P++AGSIDGTD PHD A+ RA++ Y+P D ++ +
Sbjct: 17 NNMLQNWSPYAREYDPLKAGSIDGTDTQPHDKAVSRAMIMH----YEPPHDLESKAE--R 70
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+FV RL + L++ SKYG V + +++ D++TG S+GY FVE ++E E RR
Sbjct: 71 TIFVARLGPKITNYDLKEFFSKYGDVISAKVIVDVITGVSQGYGFVEMKSEEEARRV 127
>gi|328776197|ref|XP_623573.2| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Apis mellifera]
Length = 206
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
M+ N +A Y P++AGSIDGTD PHD AI RA+ A P G P
Sbjct: 1 MANTLQNWSPFAKEYDPLKAGSIDGTDTEPHDKAISRAI---QAHYESPHG---LKSKPE 54
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+FV R ++ L++ SKYG V + +++ DIVTG S+GY FVE +E E RR
Sbjct: 55 RTLFVARFGPKITKHDLKEFFSKYGEVISAKVIVDIVTGLSQGYGFVEMRSEDEARRVLR 114
Query: 121 VC 122
C
Sbjct: 115 RC 116
>gi|350398824|ref|XP_003485315.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Bombus impatiens]
Length = 207
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 7 NSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVG 66
N YA Y P++AGSIDGTD PHD AI RA+ Y+P K+ P T+FV
Sbjct: 7 NWSPYAKKYEPLKAGSIDGTDTEPHDKAISRAMQAH----YEPPHGLKS--KPERTLFVA 60
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
R ++ L++ S+YG V + +++ D+VTG S+GY F+E E E RR C
Sbjct: 61 RFGPKITKHDLKEFFSRYGEVVSAKVIVDVVTGLSQGYGFIEMRNEDEARRVIRRC 116
>gi|380011282|ref|XP_003689739.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Apis florea]
Length = 207
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
+A Y P++AGSIDGTD PHD AI RA+ A P G P T+FV R
Sbjct: 13 FAKEYDPLKAGSIDGTDTEPHDKAISRAM---QAHYESPHG---LKSKPERTLFVARFGP 66
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
++ L++ SKYG V + +++ DIVTG S GY FVE +E E +R C
Sbjct: 67 KITKHDLKEFFSKYGEVISAKVIVDIVTGLSHGYGFVEMRSEDEAKRVLRRC 118
>gi|383852521|ref|XP_003701775.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Megachile rotundata]
Length = 186
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
YA Y P++AGSIDGTD PHD AI RA+ Y+P K+ P T+FV R
Sbjct: 18 YAKEYDPLKAGSIDGTDTEPHDKAISRAIQAH----YEPPYGLKS--KPERTLFVARFGP 71
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++ L++ +YG V + +++ DIVTG ++GY FVE +E E RRA
Sbjct: 72 KVTKHDLKEFFCRYGDVISAKVIVDIVTGLTQGYGFVEMRSEDEARRA 119
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP + K+ GDP+ T+FV R+S+ TSE L+ S+YG +K +RLV D VTG +GYAF
Sbjct: 84 WDPHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQYGPIKKIRLVTDQVTGKPKGYAF 143
Query: 107 VEYETEREMRRAYE 120
+E+E ER+M+ AY+
Sbjct: 144 IEFEKERDMKIAYK 157
>gi|307168935|gb|EFN61821.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Camponotus
floridanus]
Length = 175
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
YA Y+P++AGSIDGTD PHD AI RA+L Y+P + ++ + T+FV R
Sbjct: 7 YAKDYNPLKAGSIDGTDTEPHDKAISRAMLMH----YEPPHNLESKSE--RTLFVARFGS 60
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++ L++ SK+G V + +++ D+VTG S+GY FVE E E RR
Sbjct: 61 NVTKYDLKEFFSKHGDVISAKVIVDVVTGLSQGYGFVEMRNEDEARRV 108
>gi|307193351|gb|EFN76213.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Harpegnathos saltator]
Length = 185
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
YA Y P++AGSIDGTDI PHD A+ RA++ Y+P D ++ + T+FV R
Sbjct: 12 YAKEYDPLKAGSIDGTDIEPHDRAVSRAMMRH----YEPPHDLESKSE--RTLFVARFGP 65
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+++ L + ++YG V + +++ D+VTG S+GY FVE +E +++R +
Sbjct: 66 KINKNDLIEFFNRYGDVISAKVIVDVVTGLSQGYGFVEMRSEEDVKRVF 114
>gi|340714885|ref|XP_003395953.1| PREDICTED: LOW QUALITY PROTEIN: u11/U12 small nuclear
ribonucleoprotein 35 kDa protein-like [Bombus
terrestris]
Length = 207
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRL-S 69
YA Y P++AGSIDGTD PHD AI RA+ Y+P K+ P T+FV R
Sbjct: 11 YAKKYEPLKAGSIDGTDTEPHDKAISRAMQAH----YEPPHGLKS--KPERTLFVARFGP 64
Query: 70 HFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
T D S+YG V + +++ D+VTG S+GY F+E E E RR C
Sbjct: 65 KITKHDLKEVFFSRYGEVVSAKVIVDVVTGLSQGYGFIEMRNEDEARRVIRRC 117
>gi|170038581|ref|XP_001847127.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
gi|167882326|gb|EDS45709.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
Length = 210
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 8 SVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGR 67
S + Y P+ GSIDGTD PHD A+ RA+ + Y P PKA GDP TVFVGR
Sbjct: 18 SKYCTEEYDPVAVGSIDGTDEFPHDRALVRAMNST----YKP--SPKAEGDPRHTVFVGR 71
Query: 68 LSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
L H E+ +R+ + G V R+VRD+VTG SRGYAFVE+ + + RA
Sbjct: 72 LEHCVDEERVRELFGRCGTVVRCRVVRDVVTGVSRGYAFVEFSRRKYVERA 122
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP D KA +P T+F+ ++++ T+EDTLR A K+G +K +R+VRD T SRGYAF
Sbjct: 94 WDPNNDTKATTEPFNTLFISKMNYETTEDTLRNAFGKFGPIKTVRVVRDASTNKSRGYAF 153
Query: 107 VEYETEREMRRAYEV 121
VE+E +M+ AY++
Sbjct: 154 VEFEKHEDMKEAYKL 168
>gi|412989201|emb|CCO15792.1| U1 small nuclear ribonucleoprotein 70 kDa [Bathycoccus prasinos]
Length = 643
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFT--SEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
+DP D KA GDP+ T+FV RL + ED LR+ +YG +K +R+VRD TG GY
Sbjct: 226 WDPHKDEKATGDPYATLFVARLPYAACEDEDVLRREFERYGDIKAIRIVRDTDTGKPTGY 285
Query: 105 AFVEYETEREMRRAY 119
AF+E+ETE +M+RA+
Sbjct: 286 AFIEFETEDDMKRAF 300
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A + YDP DP GDP+ T+FV RL++ TSE +++ YG +K +RLV D V
Sbjct: 115 AKVAEELQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKVKRDFEAYGPIKRVRLVTDKV 174
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAFVEY R+M+ AY+
Sbjct: 175 TNKPRGYAFVEYVHTRDMKSAYKQA 199
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 50/85 (58%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A + YDP DP GDP+ T+FV RL + TSE +++ YG +K +RLV D V
Sbjct: 115 AKVAEELQKYDPQNDPNVTGDPYKTLFVARLGYETSEQKVKRDFEAYGPIKRVRLVTDKV 174
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAFVEY R+M+ AY+
Sbjct: 175 TNKPRGYAFVEYAHTRDMKSAYKQA 199
>gi|19114691|ref|NP_593779.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675931|sp|O13829.1|RU17_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein usp101; Short=U1 snRNP protein usp101
gi|2388912|emb|CAB11649.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe]
Length = 261
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
YHP ++ + R L S ++DP D IGDP+ T+F+ RLS+ T
Sbjct: 53 QYHPTESLEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTK 112
Query: 74 EDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVCG 123
E + + ++YG ++ +R+VR+ VTG S GYAFV +E ER+++ AY+
Sbjct: 113 ESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASA 162
>gi|145542919|ref|XP_001457146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424961|emb|CAK89749.1| unnamed protein product [Paramecium tetraurelia]
Length = 315
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 29 HPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVK 88
H H+ + + L L++P DP +P+ T+FVGRL++ T++ LRK +YG +K
Sbjct: 119 HQHNEELKKLL-----QLWNPFEDPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIK 173
Query: 89 NLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
++R++RD RGYAF+EYE++ +++AY+
Sbjct: 174 SIRIIRDSTQDKPRGYAFIEYESKNSVKQAYK 205
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 51/84 (60%)
Query: 37 RALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
R L S +DP D K GDP T+FVGR++ TSE LR+ YG VK + +V D
Sbjct: 78 RLKLESEIETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRREFESYGPVKRINIVSDP 137
Query: 97 VTGASRGYAFVEYETEREMRRAYE 120
+G RGYAFVEYE ER+M AY+
Sbjct: 138 KSGKPRGYAFVEYENERDMHSAYK 161
>gi|145538127|ref|XP_001454769.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422546|emb|CAK87372.1| unnamed protein product [Paramecium tetraurelia]
Length = 308
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 29 HPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVK 88
H H+ + + L L++P DP +P+ T+FVGRL++ T++ LRK +YG +K
Sbjct: 111 HQHNEELKKLL-----QLWNPFEDPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIK 165
Query: 89 NLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
++R++RD RGYAF+EYE++ +++AY+
Sbjct: 166 SIRIIRDSTQDKPRGYAFIEYESKNSVKQAYK 197
>gi|392495108|gb|AFM74217.1| U1 small nuclear ribonucleoprotein 70 kD [Spirometra
erinaceieuropaei]
Length = 297
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L++P +P A G+P+ T+FV RL++ TSE LR+ YG +K + +++DI TG
Sbjct: 80 LEQDLALWNPKKNPNATGNPYNTLFVARLNYDTSEHKLRREFDVYGPIKRISMIKDIATG 139
Query: 100 ASRGYAFVEYETEREMRRA 118
RGYAF+E+E ER+M A
Sbjct: 140 KPRGYAFIEFEHERDMHAA 158
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++ + P +P A DP T+F+ LS+ T+E++L++ M +YG +K + +VR+ T
Sbjct: 83 LETATAAWHPKENPNATSDPFKTLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTS 142
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAFVE+E ER+M+ AY+
Sbjct: 143 KPRGYAFVEFEHERDMKDAYK 163
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L YDP DP A GDP+ T+F+G+LS+ T+E L++ +YG VK +RLV D T
Sbjct: 75 LAEEIPKYDPRSDPNARGDPYKTLFIGKLSYDTTEHRLQREFERYGPVKRVRLVHDKHTD 134
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAFVE+ ++M+ AY+
Sbjct: 135 KPRGYAFVEFYHSQDMKNAYK 155
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 47 YDPLGDPKAI-GDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
+DP DPKA DP+ T+FVGRLS+ E LR+ ++G VK++R+V D+ TG RGYA
Sbjct: 179 WDPKEDPKAKDSDPYKTLFVGRLSYDVDESKLRREFEQWGPVKSVRVVEDVETGKPRGYA 238
Query: 106 FVEYETEREMRRAYE 120
F+EY E +M+ AY+
Sbjct: 239 FIEYNRESDMKTAYK 253
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV D T RGYAF
Sbjct: 125 YDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAF 184
Query: 107 VEYETEREMRRAYE 120
+EY R+M+ AY+
Sbjct: 185 IEYMHTRDMKNAYK 198
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV D T RGYAF
Sbjct: 125 YDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAF 184
Query: 107 VEYETEREMRRAYE 120
+EY R+M+ AY+
Sbjct: 185 IEYMHTRDMKNAYK 198
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+A+GDP+ T+F+ RL +E LR+ YG ++ +R+VRD G SRGYAF
Sbjct: 95 YKPADDPEAVGDPYKTLFISRLHKTATETDLRREFEGYGTIERVRIVRD-KKGRSRGYAF 153
Query: 107 VEYETEREMRRAYE 120
V YE ER+M+ AY+
Sbjct: 154 VVYERERDMKAAYK 167
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A + YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV +
Sbjct: 115 AKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKD 174
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAF+EY R+M+ AY+
Sbjct: 175 TSKPRGYAFIEYVHTRDMKNAYKQA 199
>gi|328858676|gb|EGG07788.1| hypothetical protein MELLADRAFT_35320 [Melampsora larici-populina
98AG31]
Length = 203
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP A GDP+ T+F+ RLS +E L+K YG ++ L +V++ +TG SRGYAF
Sbjct: 94 YDPKEDPNATGDPYRTLFISRLSFEATESDLKKEFDMYGPIEKLLIVKNKLTGKSRGYAF 153
Query: 107 VEYETEREMRRAYE 120
+ +E E++M+ AY+
Sbjct: 154 ILFEREKDMKAAYK 167
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A + YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV +
Sbjct: 115 AKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKD 174
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAF+EY R+M+ AY+
Sbjct: 175 TSKPRGYAFIEYVHTRDMKNAYKQA 199
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP GDP+ T+FV RL++ T+E +++ YG +K +RL+ D T RGYAF
Sbjct: 124 YDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAF 183
Query: 107 VEYETEREMRRAYE 120
+EY R+M+ AY+
Sbjct: 184 IEYMHTRDMKAAYK 197
>gi|167517869|ref|XP_001743275.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778374|gb|EDQ91989.1| predicted protein [Monosiga brevicollis MX1]
Length = 383
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++ + P +PKA DP T+FVGRLS+ E+ L+K S YG VK++ LVRD G
Sbjct: 85 LSAALEAWKPKENPKATSDPFKTLFVGRLSYALDEEVLKKEFSTYGPVKDVSLVRD-ADG 143
Query: 100 ASRGYAFVEYETEREMRRAYE 120
SRGYAF+E+E E +++ AY+
Sbjct: 144 KSRGYAFIEFEHENDLKAAYK 164
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+AIGDP+ T+F+ RL +E LR+ YG ++ +R+VRD G SRGYAF
Sbjct: 105 YKPADDPEAIGDPYKTLFIARLHKSATETDLRREFEGYGTIERVRIVRD-KNGRSRGYAF 163
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 164 IVYERERDMKAAYK 177
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+A+GDP+ T+F+ RL +E LR+ YG ++ +R+VRD G SRGYAF
Sbjct: 100 YKPADDPEAVGDPYKTLFISRLHKNATESDLRREFESYGMIERVRIVRD-KQGRSRGYAF 158
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 159 IVYERERDMKTAYK 172
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A + YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV +
Sbjct: 115 AKVAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKD 174
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAF+EY R+M+ AY
Sbjct: 175 TSKPRGYAFIEYVHTRDMKNAYPAA 199
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 53/76 (69%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L++P +PKA +P+ T+FV RL++ T+E +++ + +GR+ N+ +V++++TG
Sbjct: 80 LEQDLALWNPKKNPKATSNPYNTMFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITG 139
Query: 100 ASRGYAFVEYETEREM 115
RGY FVE+E ER+M
Sbjct: 140 KPRGYCFVEFEHERDM 155
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 51/74 (68%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP DP A GD T+FV R+++ T+E LR+ YG+++ + +V+D+ TG RGYAF
Sbjct: 90 WDPHNDPNAGGDAFKTLFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAF 149
Query: 107 VEYETEREMRRAYE 120
VE++ ER+M AY+
Sbjct: 150 VEFDRERDMHTAYK 163
>gi|156371745|ref|XP_001628922.1| predicted protein [Nematostella vectensis]
gi|156215911|gb|EDO36859.1| predicted protein [Nematostella vectensis]
Length = 245
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L G +DP DP A GD T+F+GR+++ TSE LR+ M YG +K++ +V +
Sbjct: 82 LEEKIGSWDPQTDPNAYGDAFKTLFIGRINYDTSESKLRREMEMYGPIKHISMVYNSKAS 141
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 142 KPRGYAFIEYEHERDMHAAYK 162
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A + YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV +
Sbjct: 115 AKIAEELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKWVRLVTEKD 174
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAF+EY R+M+ AY+
Sbjct: 175 TSKPRGYAFIEYVHTRDMKSAYKQA 199
>gi|256072974|ref|XP_002572808.1| U1 small nuclear ribonucleoprotein 70 kD [Schistosoma mansoni]
gi|360042919|emb|CCD78329.1| putative u1 small nuclear ribonucleoprotein 70 kD [Schistosoma
mansoni]
Length = 307
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L++P +PKA +P+ T+FV RL++ T+E L++ + +GR+ N+ +V++++TG
Sbjct: 80 LEQDLALWNPKKNPKATSNPYNTMFVARLNYETTESKLKREIDVFGRINNIVMVKNVMTG 139
Query: 100 ASRGYAFVEYETEREMRRA 118
RGY FVE+E ER+M A
Sbjct: 140 KPRGYCFVEFEHERDMHAA 158
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP G P DP T+FV R+++ TSE LR+ YG VK + ++ + + G RGY
Sbjct: 86 AVWDPAGIPNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP G P DP T+FV R+++ TSE LR+ YG VK + ++ + + G RGY
Sbjct: 86 AVWDPAGIPNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP G P DP T+FV R+++ TSE LR+ YG VK + ++ + + G RGY
Sbjct: 86 AVWDPAGIPNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+AIGDP+ T+F+ RL SE LR+ +G ++ +R+VRD G SRGYAF
Sbjct: 103 YKPSDDPEAIGDPYKTLFISRLHKGASEMELRRDFESFGTIERVRIVRD-SKGRSRGYAF 161
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 162 IVYERERDMKAAYK 175
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP GDP+ T+FV RL++ TSE +++ YG +K +RLV D T RGYAF
Sbjct: 125 YDPQSDPNTTGDPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPRGYAF 184
Query: 107 VEYETEREMRRAYE 120
+EY R+M+ AY+
Sbjct: 185 IEYMHTRDMKNAYK 198
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP A GDP+ T+F+ RLS +E L+K +YG ++ +RLVRD SRGYAF
Sbjct: 99 YKPSEDPHAQGDPYKTLFISRLSKKVTEKDLQKEFERYGDIEQIRLVRD-PQARSRGYAF 157
Query: 107 VEYETEREMRRAYE 120
V YE ER+M+ AY+
Sbjct: 158 VVYERERDMKAAYK 171
>gi|443916274|gb|ELU37399.1| U1 snRNP 70K protein [Rhizoctonia solani AG-1 IA]
Length = 250
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+A GDP+ T+F+ RLS +ED LRK YGR++ +RLVR+ G SRGYAF
Sbjct: 100 YKPADDPEATGDPYKTLFISRLSKNATEDDLRKEFGTYGRIERIRLVRN-KRGVSRGYAF 158
Query: 107 VEYETEREMR 116
+ Y+ E++M+
Sbjct: 159 IVYDREKDMK 168
>gi|307103245|gb|EFN51507.1| hypothetical protein CHLNCDRAFT_140193 [Chlorella variabilis]
Length = 277
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 26 TDIHPHDNAICRALLCSSAGL--YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSK 83
DI RA L +DP DP GDP T+FV RLS+ +E L++ +
Sbjct: 84 KDIRVRQERQQRAARQREENLKSWDPSKDPNVEGDPFKTLFVSRLSYDVTERKLKREFEE 143
Query: 84 YGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
YG +K +RLV + +G RGYAF+EYE + +M++AY++
Sbjct: 144 YGPIKRIRLVHNKNSGKPRGYAFIEYEHKNDMKQAYKMA 182
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L + +DP D A +P+ T+FV RLS T+E TL+ +G VK++ +V+D+ TG
Sbjct: 79 LQEAIDAWDPHKDENATAEPYKTLFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTG 138
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAF+E+E ER+M+ AY+
Sbjct: 139 KPRGYAFIEFEHERDMKIAYK 159
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP +PKA DP T+F+ R+++ TSE LR+ +YG +K + L+ ++ RGY
Sbjct: 86 ALWDPNNNPKATADPFKTLFIARINYETSEGKLRREFEQYGAIKQVSLIHSSISNKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EY ER+M AY+
Sbjct: 146 AFIEYAHERDMHAAYK 161
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P + KA DP T+FV RLS+ T+E LR+ YG +K + ++ DI+TG SRGYAF
Sbjct: 88 WNPSANDKASTDPFKTLFVARLSYDTTETKLRREFEVYGPIKKIYMITDIITGKSRGYAF 147
Query: 107 VEYETEREMRRAYE 120
+EYE E +M AY+
Sbjct: 148 IEYEHEADMHAAYK 161
>gi|388580661|gb|EIM20974.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 324
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +AIGDP T+F+ RLS T+E LRK YG ++ +R+VR TG SRGYAF
Sbjct: 103 YKPTEDIEAIGDPFKTLFIARLSVETTESDLRKEFEVYGPIERVRIVRHKDTGKSRGYAF 162
Query: 107 VEYETEREMRRAYE 120
+ +E ER+M+ AY+
Sbjct: 163 LIFEKERDMKAAYK 176
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP DPK GDP+ T+ V RLS +E LR+ +YG VK +RLV D G SRGYAF
Sbjct: 137 FDPNKDPKIEGDPYKTILVARLSFDVTEKKLRREFEEYGPVKRVRLVMD-KNGKSRGYAF 195
Query: 107 VEYETEREMRRAYE 120
VEYE + +M+ AY+
Sbjct: 196 VEYEHKADMKEAYK 209
>gi|348538876|ref|XP_003456916.1| PREDICTED: hypothetical protein LOC100701048 [Oreochromis
niloticus]
Length = 470
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 37 RALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
+A++ + L+DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +
Sbjct: 79 QAVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNK 138
Query: 97 VTGASRGYAFVEYETEREMRRAYE 120
TG RGYAF+EYE ER+M AY+
Sbjct: 139 KTGKPRGYAFIEYEHERDMHSAYK 162
>gi|320582206|gb|EFW96424.1| hypothetical protein HPODL_2081 [Ogataea parapolymorpha DL-1]
Length = 256
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Query: 31 HDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
+ +A+ RALL ++P D GDP+ TVFVGRL + +E LR+ +++G + +
Sbjct: 76 NKDALQRALLK-----WNPETDTNIAGDPYKTVFVGRLDYTVNEIELREKFAQFGEIDQI 130
Query: 91 RLVRDIVTGASRGYAFVEYETEREMRRAYE 120
R+VRD TG SRGYAF+ Y++E + + A++
Sbjct: 131 RVVRDTNTGKSRGYAFILYKSESDAKLAFQ 160
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++P DPK GD + T+F+ ++S+ T+E LR+ ++GR++++R+V+D G
Sbjct: 100 LKDKISKWNPKDDPKTKGDAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQD-EDG 158
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAFVEYE E +MR AY+
Sbjct: 159 KPRGYAFVEYENEDDMRVAYK 179
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP A GDP+ T+FV RL++ +SE +++ YG +K + LV D +T +GYAF
Sbjct: 124 YDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAF 183
Query: 107 VEYETEREMRRAYE 120
+EY R+M+ AY+
Sbjct: 184 IEYMHTRDMKAAYK 197
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP A GDP+ T+FV RL++ +SE +++ YG +K + LV D +T +GYAF
Sbjct: 124 YDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAF 183
Query: 107 VEYETEREMRRAYE 120
+EY R+M+ AY+
Sbjct: 184 IEYMHTRDMKAAYK 197
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+A GDP+ T+F+ RL SE LR+ +G ++ +R+VRD G SRGYAF
Sbjct: 109 YKPAEDPEATGDPYKTLFISRLHKNASESDLRREFESFGSIERVRIVRD-KNGRSRGYAF 167
Query: 107 VEYETEREMRRAYE 120
+ +E ER+M+ AY+
Sbjct: 168 IVFERERDMKAAYK 181
>gi|358054541|dbj|GAA99467.1| hypothetical protein E5Q_06166 [Mixia osmundae IAM 14324]
Length = 375
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D A+GDP+ T+F+ RL +E+ LRK YGR++NL+++RD SRGYAF
Sbjct: 101 YKPKEDEHAVGDPYRTIFISRLHRDATEEQLRKEFDLYGRIENLKIIRDSKE-KSRGYAF 159
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 160 ILYERERDMKAAYK 173
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+AIGDP+ T+F+ RL SE LR+ +G ++ +R+VRD G SRGYAF
Sbjct: 103 YKPSDDPEAIGDPYKTLFISRLHKGASEMELRRDFESFGTIERVRIVRD-SKGRSRGYAF 161
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 162 IVYERERDMKAAYK 175
>gi|195996029|ref|XP_002107883.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
gi|190588659|gb|EDV28681.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
Length = 342
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A L +DP +PK DP T+ V RLS+ T+E LR+ + YG VK++R + D+
Sbjct: 79 AKLQKDLAQWDPHNNPKGTEDPFKTLLVSRLSYDTTESKLRRELEAYGSVKSVRSIYDL- 137
Query: 98 TGASRGYAFVEYETEREMRRAYE 120
+G +GYAFVE+E ER+M+ AY+
Sbjct: 138 SGKPKGYAFVEFEHERDMKAAYK 160
>gi|242003896|ref|XP_002422903.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
Length = 309
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++DP P A GDP T+FV R+++ TSE LR+ YG +K + + + + G
Sbjct: 81 LEQEIAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRREFEVYGPIKKIVVSHNTING 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 141 KPRGYAFIEYEHERDMHSAYK 161
>gi|291222252|ref|XP_002731131.1| PREDICTED: small nuclear ribonucleoprotein 70kDa polypeptide (RNP
antigen)-like, partial [Saccoglossus kowalevskii]
Length = 402
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
G +DP +P+ GD T+FV R+++ TSE LR+ YG + ++R+V+ + TG RGY
Sbjct: 38 GSWDPNANPR-FGDAFKTLFVARINYDTSESKLRREFESYGPINSIRMVQSVETGKPRGY 96
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 97 AFIEYEHERDMHSAYK 112
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A YDP DP GDP+ T+FV RLS+ T+E +++ YG +K +RLV D
Sbjct: 112 AKAAEELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAE 171
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
+ RGYAF+EY R+M+ AY+
Sbjct: 172 SNKPRGYAFIEYLHTRDMKAAYKQA 196
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A YDP DP GDP+ T+FV +LS+ T+E +++ YG +K +RLV D
Sbjct: 118 AKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKD 177
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
T RGYAF+EY R+M+ AY+
Sbjct: 178 TNKPRGYAFIEYLHTRDMKAAYKQA 202
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A YDP DP GDP+ T+FV RLS+ T+E +++ YG +K +RLV D
Sbjct: 116 AKAAEELEKYDPHTDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTE 175
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
+ RGYAF+EY R+M+ AY+
Sbjct: 176 SNKPRGYAFIEYLHTRDMKAAYKQA 200
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GDP T+FV R+S+ +E L++ +YG VK +RLV +G RGYA
Sbjct: 138 IWDPAKDPLAEGDPFKTLFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYA 197
Query: 106 FVEYETEREMRRAYEV 121
FVE+E + +M+ AY++
Sbjct: 198 FVEFEHKNDMKTAYKM 213
>gi|432871355|ref|XP_004071924.1| PREDICTED: uncharacterized protein LOC101174750 [Oryzias latipes]
Length = 469
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L+DP DP A GD T+FV R+++ T+E LR+ YG +K + +V + TG RGYA
Sbjct: 88 LWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNKGTGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|307193764|gb|EFN76445.1| U1 small nuclear ribonucleoprotein 70 kDa [Harpegnathos saltator]
Length = 239
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++DP G DP T+FV R+++ TSE LR+ YG VK + ++ + V G
Sbjct: 81 LEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTVNG 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 141 KPRGYAFIEYEHERDMHSAYK 161
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 38 ALLCSSAGLYDP-LGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
A + +DP DP+ D + T+FVGR+S+ T+E LR +YG VK++RLV D
Sbjct: 6 AQMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVED- 64
Query: 97 VTGASRGYAFVEYETEREMRRAYEVC 122
G SRGY FVEYE E +M+ AY+
Sbjct: 65 PEGKSRGYGFVEYEKEEDMKAAYKYA 90
>gi|328873267|gb|EGG21634.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
fasciculatum]
Length = 433
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 53/74 (71%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P + +A GDP+ T+FV R+ + T E L++ S++G +K +RLV D V+G +GYAF
Sbjct: 86 WEPHTETRATGDPYKTLFVARIDYNTPETKLKEEFSQFGPIKKIRLVHDAVSGKPKGYAF 145
Query: 107 VEYETEREMRRAYE 120
+E+E ER+M+ A++
Sbjct: 146 IEFEKERDMKAAHK 159
>gi|390595574|gb|EIN04979.1| hypothetical protein PUNSTDRAFT_55288 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 170
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+A+GDP+ T+F+ RL +E LR+ YG ++ +R+VRD G SRGYAF
Sbjct: 101 YKPQEDPEAVGDPYKTLFIARLHKSATESDLRREFESYGTIERVRIVRD-KNGRSRGYAF 159
Query: 107 VEYETEREMR 116
+ YE ER+M+
Sbjct: 160 IVYERERDMK 169
>gi|260805174|ref|XP_002597462.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
gi|229282727|gb|EEN53474.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
Length = 173
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L +DP D A GD + T+FV R+++ TSE LR+ YG ++++++ +D+ TG
Sbjct: 82 LEEKVSEWDPANDANASGDAYKTLFVARINYDTSESKLRREFEVYGPIRSIKMTKDVNTG 141
Query: 100 ASRGYAFVEYETEREM 115
RGYAF+EYE ER+M
Sbjct: 142 KPRGYAFIEYEHERDM 157
>gi|321251142|ref|XP_003191972.1| U1 snRNP 70K protein (short form) [Cryptococcus gattii WM276]
gi|317458440|gb|ADV20185.1| U1 snRNP 70K protein (short form), putative [Cryptococcus gattii
WM276]
Length = 435
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
S+ Y P D +AIGDP+ T+F+ RLS +E LR+ YG ++ +R+VR+ G S
Sbjct: 134 SAEANYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRN-RKGKS 192
Query: 102 RGYAFVEYETEREMRRAYE 120
GYAF+ YE ER+M+ AY+
Sbjct: 193 NGYAFIVYERERDMKAAYK 211
>gi|393221008|gb|EJD06493.1| hypothetical protein FOMMEDRAFT_77333 [Fomitiporia mediterranea
MF3/22]
Length = 184
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
++ +Y P DP+A+GDP+ T+FV RL E LR+ YG ++ +R+VRD G S
Sbjct: 102 NAKEMYKPAEDPEAVGDPYKTLFVARLKKQAKEIDLRRVFEGYGTIERVRIVRD-KKGRS 160
Query: 102 RGYAFVEYETEREMR 116
RGYAF+ YE ER+M+
Sbjct: 161 RGYAFIVYERERDMK 175
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP G DP T+FV R+++ TSE LR+ YG VK + ++ + + G RGY
Sbjct: 86 AVWDPAGISNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|58258329|ref|XP_566577.1| U1 snRNP 70K protein (short form) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222714|gb|AAW40758.1| U1 snRNP 70K protein (short form), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 429
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +AIGDP+ T+F+ RLS +E LR+ YG ++ +R+VR+ G S GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRN-RKGKSNGYAF 197
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 198 IVYERERDMKAAYK 211
>gi|134106223|ref|XP_778122.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260825|gb|EAL23475.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +AIGDP+ T+F+ RLS +E LR+ YG ++ +R+VR+ G S GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRN-RKGKSNGYAF 197
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 198 IVYERERDMKAAYK 211
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP GDP+ T+FV RL++ T+E +++ YG +K +RL+ D T RGYAF
Sbjct: 124 YDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAF 183
Query: 107 VEYETEREMRRAYEVC 122
+EY R+M+ AY+
Sbjct: 184 IEYMHTRDMKAAYKQA 199
>gi|410905871|ref|XP_003966415.1| PREDICTED: uncharacterized protein LOC101066791 [Takifugu rubripes]
Length = 467
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 37 RALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
+ +L + L+DP DP A GD T+FV R+++ T+E LR+ YG +K + +V
Sbjct: 79 QTVLETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYSK 138
Query: 97 VTGASRGYAFVEYETEREMRRAYE 120
T RGYAF+EYE ER+M AY+
Sbjct: 139 RTAKPRGYAFIEYEHERDMHSAYK 162
>gi|405117502|gb|AFR92277.1| U1 snRNP 70K protein [Cryptococcus neoformans var. grubii H99]
Length = 435
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +AIGDP+ T+F+ RLS +E LR+ YG ++ +R+VR+ G S GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRN-RKGKSNGYAF 197
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 198 IVYERERDMKAAYK 211
>gi|357627216|gb|EHJ76977.1| hypothetical protein KGM_19833 [Danaus plexippus]
Length = 392
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 45/71 (63%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP + KA GDP T+FV R+++ TSE LR+ YG +K + +V G RGY
Sbjct: 86 ALWDPTTNAKATGDPFKTLFVARVNYDTSESKLRREFEGYGPIKKIHMVYSKENGKPRGY 145
Query: 105 AFVEYETEREM 115
AF+EYE ER+M
Sbjct: 146 AFIEYEHERDM 156
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP A GDP+ T+FV RL++ +SE +++ YG +K + LV D +T +GYAF
Sbjct: 18 YDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAF 77
Query: 107 VEYETEREMRRAYEVC 122
+EY R+M+ AY+
Sbjct: 78 IEYMHTRDMKAAYKQA 93
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y+P DP DP+ T+FV RL++ TSE +++ YG +K +RLV D T RGYAF
Sbjct: 125 YNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKDTNKPRGYAF 184
Query: 107 VEYETEREMRRAYEVC 122
+EY R+M+ AY+
Sbjct: 185 IEYMHTRDMKNAYKQA 200
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP P DP T+FV R+++ TSE LR+ YG +K + L+ + V G RGY
Sbjct: 86 AVWDPNSAPNITVDPFKTLFVARINYDTSESKLRREFEVYGPIKKIVLIHNSVNGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+A+GDP+ T+F+ RL +E LR+ +G ++ +R+VRD G S+GYAF
Sbjct: 104 YKPADDPEAVGDPYKTLFIARLHKSATEGDLRREFEGFGSIERVRIVRD-KNGRSQGYAF 162
Query: 107 VEYETEREMRRAYE 120
+ +E ER+M+ AY+
Sbjct: 163 IVFERERDMKAAYK 176
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L+DP + DP T+FV R+++ TSE LR+ +G +K + +V + +TG
Sbjct: 81 LEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITG 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAFVEYE ER+M AY+
Sbjct: 141 KPRGYAFVEYEHERDMHSAYK 161
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP D K +GDP T+FV RL+ +E+ L + K+G VK++R+VRD+ +G S GY F
Sbjct: 105 WDPKKDDKIVGDPFKTLFVARLAFDVTENDLEEHYIKFGPVKHVRIVRDLKSGKSNGYGF 164
Query: 107 VEYETEREMRRAYEVC 122
VE++ E + R+A+++
Sbjct: 165 VEFQEEDDFRKAFQMT 180
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P DP A GD + T+FV +S+ TSE LR+ +YG++K +RLV D+ RGYAF
Sbjct: 102 WNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVNDL-EDQPRGYAF 160
Query: 107 VEYETEREMRRAYEVC 122
+EYE E +M AY+
Sbjct: 161 IEYEREEDMHMAYKKA 176
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP G DP T+FV R+++ TSE LR+ YG VK + ++ + + G RGY
Sbjct: 86 AVWDPAGILNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L+DP + DP T+FV R+++ TSE LR+ +G +K + +V + +TG
Sbjct: 81 LEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITG 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAFVEYE ER+M AY+
Sbjct: 141 KPRGYAFVEYEHERDMHSAYK 161
>gi|443704417|gb|ELU01479.1| hypothetical protein CAPTEDRAFT_111454 [Capitella teleta]
Length = 194
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L+DP DP GDP T+FV R+++ +SE LR+ +G V+ + LV + TG
Sbjct: 81 LEQDLALWDPANDPSVTGDPFKTLFVARVNYDSSESKLRREFEAHGPVRRISLVTNRKTG 140
Query: 100 ASRGYAFVEYETEREM 115
RGYAF+E+E ER+M
Sbjct: 141 KPRGYAFIEFEHERDM 156
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP P DP T+FV R+++ TSE LR+ YG VK + ++ + + G RGY
Sbjct: 86 AVWDPASIPNVTVDPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNSINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|225734047|pdb|3CW1|K Chain K, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734056|pdb|3CW1|6 Chain 6, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734065|pdb|3CW1|7 Chain 7, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734074|pdb|3CW1|8 Chain 8, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 216
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ ++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G
Sbjct: 84 TELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKP 143
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 144 RGYAFIEYEHERDMHSAYK 162
>gi|119572837|gb|EAW52452.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_g [Homo sapiens]
Length = 395
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|74140671|dbj|BAB29263.3| unnamed protein product [Mus musculus]
gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Length = 248
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|440906344|gb|ELR56614.1| U1 small nuclear ribonucleoprotein 70 kDa, partial [Bos grunniens
mutus]
Length = 222
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ ++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G
Sbjct: 84 TELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKP 143
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 144 RGYAFIEYEHERDMHSAYK 162
>gi|355756025|gb|EHH59772.1| hypothetical protein EGM_09962 [Macaca fascicularis]
Length = 255
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|344270065|ref|XP_003406866.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Loxodonta africana]
Length = 229
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|332017705|gb|EGI58383.1| U1 small nuclear ribonucleoprotein 70 kDa [Acromyrmex echinatior]
Length = 405
Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
++DP G DP T+FV R+++ TSE LR+ YG VK + + + + G RGY
Sbjct: 86 AVWDPAGISNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVTHNTINGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHSAYK 161
>gi|343961429|dbj|BAK62304.1| U1 small nuclear ribonucleoprotein 70 kDa [Pan troglodytes]
Length = 251
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|119478256|ref|XP_001259339.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
gi|119407493|gb|EAW17442.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
Length = 382
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
YDP DP+A GDP T+FV RLS+ E L + ++G ++ +R+V+D VT
Sbjct: 88 YDPSNDPQARGDPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPH 147
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 148 RGYAFIVYEREKDMKAAYK 166
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 120 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 179
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 180 FIEYEHERDMHSAYK 194
>gi|221126649|ref|XP_002157902.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Hydra
magnipapillata]
Length = 351
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP DP A GDP T+FV R+++ T+E LR+ + +G ++ + +V + V RGYAF
Sbjct: 87 WDPHTDPNASGDPFKTLFVARINYDTTESKLRRELETHGPIRKIHMVYNFVKRKPRGYAF 146
Query: 107 VEYETEREMRRAYE 120
VE+E ER+M+ A++
Sbjct: 147 VEFEHERDMQAAFK 160
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 52 DPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
DP GDP+ T+FV RL++ T+E +++ YG +K +RL+ D VTG +GYAF+EY
Sbjct: 129 DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMH 188
Query: 112 EREMRRAYEVC 122
+R+M+ AY+
Sbjct: 189 KRDMKAAYKQA 199
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|351703349|gb|EHB06268.1| U1 small nuclear ribonucleoprotein 70 kDa [Heterocephalus glaber]
Length = 431
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|431920778|gb|ELK18551.1| U1 small nuclear ribonucleoprotein 70 kDa [Pteropus alecto]
Length = 423
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|426244049|ref|XP_004015848.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Ovis aries]
Length = 340
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|383420989|gb|AFH33708.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +A+GDP+ T+F+ RL +E LR+ YG ++ +R+VRD SRGYAF
Sbjct: 102 YKPADDAEAVGDPYKTLFISRLHKSATETDLRREFEGYGTIERVRIVRD-KKNRSRGYAF 160
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 161 IVYERERDMKAAYK 174
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +A+GDP+ T+F+ RL +E LR+ YG ++ +R+VRD SRGYAF
Sbjct: 102 YKPADDAEAVGDPYKTLFISRLHKSATETDLRREFEGYGTIERVRIVRD-KKNRSRGYAF 160
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 161 IVYERERDMKAAYK 174
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|297277576|ref|XP_002801385.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Macaca mulatta]
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen [Homo sapiens]
gi|119572835|gb|EAW52450.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_e [Homo sapiens]
gi|380815838|gb|AFE79793.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384948960|gb|AFI38085.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|145347107|ref|XP_001418019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578247|gb|ABO96312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 36 CRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD 95
R L+ + Y P +P A DP+ T+F+ RL++ ED LR+ YG V +++LVRD
Sbjct: 76 SRELIEAGLDGYRPNENPNATSDPYRTLFIARLAYDVDEDKLRREAEYYGAVSDVKLVRD 135
Query: 96 IVTGASRGYAFVEYETEREMRRAY 119
G SRGYAF+E+E E +MR AY
Sbjct: 136 -EKGKSRGYAFIEFEREGDMRAAY 158
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|354493110|ref|XP_003508687.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Cricetulus griseus]
gi|344247885|gb|EGW03989.1| U1 small nuclear ribonucleoprotein 70 kDa [Cricetulus griseus]
Length = 445
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP GDP+ T+FV RL++ T+E +++ YG +K +RL+ D RGYAF
Sbjct: 124 YDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAF 183
Query: 107 VEYETEREMRRAYEVC 122
+EY R+M+ AY+
Sbjct: 184 IEYMHTRDMKAAYKQA 199
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|51468002|ref|NP_001003875.1| U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
gi|49619089|gb|AAT68129.1| U1 small ribonucleoprotein 70kd [Danio rerio]
Length = 495
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L+DP D A GD T+FV R+++ T+E LR+ YG +K + +V + TG RGYA
Sbjct: 88 LWDPHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 225 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 284
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 285 FIEYEHERDMHSAYK 299
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A YDP DP GDP+ T+FV +LS+ T+E +++ YG +K +RLV D
Sbjct: 118 AKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKD 177
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
RGYAF+EY R+M+ AY+
Sbjct: 178 INKPRGYAFIEYLHTRDMKAAYKQA 202
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|149055933|gb|EDM07364.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_c [Rattus norvegicus]
gi|187469313|gb|AAI67051.1| Snrp70 protein [Rattus norvegicus]
Length = 451
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
gi|83305641|sp|Q62376.2|RU17_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|74144840|dbj|BAE27392.1| unnamed protein product [Mus musculus]
gi|74221620|dbj|BAE21515.1| unnamed protein product [Mus musculus]
gi|124297316|gb|AAI32021.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|124298068|gb|AAI31995.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|148690898|gb|EDL22845.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
gi|148690901|gb|EDL22848.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
Length = 448
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++P D A+ DP T+FV R+++ TSE LR+ YG +K + + R+ + G
Sbjct: 81 LEQEIAAWNPHSDANAVTDPFKTLFVARINYDTSESKLRREFELYGLIKKIVVTRNKIDG 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 141 KPRGYAFIEYENERDMYSAYK 161
>gi|145544312|ref|XP_001457841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425659|emb|CAK90444.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P D DP+ T+FVGRL+ T++ LRK +YG +K++R+VRD RGYAF
Sbjct: 124 WNPFEDANITSDPYKTLFVGRLNFATTDKKLRKEFEEYGPIKSVRIVRDSTHDKPRGYAF 183
Query: 107 VEYETEREMRRAYE 120
+EYE++ ++ AY+
Sbjct: 184 IEYESKNSVKSAYK 197
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%)
Query: 38 ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
A YDP DP GDP+ T+FV +LS+ T+E +++ YG +K +RLV D
Sbjct: 118 AKAAEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKD 177
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
RGYAF+EY R+M+ AY+
Sbjct: 178 INKPRGYAFIEYLHTRDMKAAYKQA 202
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 265 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 324
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 325 FIEYEHERDMHSAYK 339
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 39 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 98
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 99 FIEYEHERDMHSAYK 113
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 1 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 60
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 61 FIEYEHERDMHSAYK 75
>gi|108742141|gb|AAI17603.1| Snrnp70 protein [Danio rerio]
Length = 339
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L+DP D A GD T+FV R+++ T+E LR+ YG +K + +V + TG RGYA
Sbjct: 88 LWDPHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L+DP D A GD T+FV R+++ T+E LR+ YG +K + +V + TG RGYA
Sbjct: 88 LWDPHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGRPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|395323376|gb|EJF55850.1| hypothetical protein DICSQDRAFT_72768 [Dichomitus squalens LYAD-421
SS1]
Length = 209
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P DP+AIGDP+ T+F+ RL +E+ LR+ +G ++ +R+VRD G SRGYAF
Sbjct: 108 YKPSEDPEAIGDPYKTLFISRLHKNATENDLRREFEGFGSIERVRIVRD-KNGRSRGYAF 166
Query: 107 VEYETEREMRRAY 119
+ +E ER+M+ Y
Sbjct: 167 IVFERERDMKGNY 179
>gi|395751523|ref|XP_002829587.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Pongo abelii]
Length = 624
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 213 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 272
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 273 FIEYEHERDMHSAYK 287
>gi|169779457|ref|XP_001824193.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus oryzae
RIB40]
gi|238500103|ref|XP_002381286.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|83772932|dbj|BAE63060.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693039|gb|EED49385.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|391870271|gb|EIT79456.1| U1 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 379
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
+DP DP+A GDP T+FV RLS+ E L + ++G ++ +R+V+D VT
Sbjct: 88 FDPSNDPQARGDPFKTLFVSRLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPH 147
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 148 RGYAFIVYEREKDMKAAYK 166
>gi|296416697|ref|XP_002838011.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633906|emb|CAZ82202.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y+P DP+ GDP T+F+ RL++ E L + ++G ++ +R+VRD TG RGYAF
Sbjct: 86 YNPEHDPQVRGDPFKTLFLSRLNYNVKEPDLEREFGRFGPIERIRIVRDKETGKHRGYAF 145
Query: 107 VEYETEREMRRAYE 120
+ YE E++M+ AY+
Sbjct: 146 IVYEREKDMKAAYK 159
>gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus]
Length = 378
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 18 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 77
Query: 106 FVEYETEREMRRAY 119
F+EYE ER+M AY
Sbjct: 78 FIEYEHERDMHSAY 91
>gi|391339647|ref|XP_003744159.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Metaseiulus occidentalis]
Length = 186
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y P+ AG+ DG+ HD RALL + + P PK DP TVFVGRL +E
Sbjct: 4 YDPVVAGTRDGSGSFIHD----RALLRAETAKFKP---PKLDTDPSKTVFVGRLPLDLTE 56
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVCG 123
D LR+ S G ++NL LVR ++ AS+GYAF+ ++ ++ RA + G
Sbjct: 57 DRLREVFSGCGTLRNLHLVRHKISRASQGYAFLTFKHSADVNRAIALHG 105
>gi|313229018|emb|CBY18170.1| unnamed protein product [Oikopleura dioica]
Length = 322
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P D K DP T+FV R+ T++ L++ +YGR+K++R+V ++ G +GYAF
Sbjct: 90 WNPHEDDKVESDPFKTLFVARIKFETNDSKLKREFEEYGRIKSVRIVENLKNGKPKGYAF 149
Query: 107 VEYETEREMRRAYEVC 122
VE+E ER+M AY+
Sbjct: 150 VEFEKERDMHSAYKYA 165
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP D A GD T+FV R+++ T+E LR+ YG +K + +V + +G RGYA
Sbjct: 88 IWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|158259701|dbj|BAF85809.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHTVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 148 FIEYEHERDMHSAYK 162
>gi|195338817|ref|XP_002036020.1| GM13669 [Drosophila sechellia]
gi|194129900|gb|EDW51943.1| GM13669 [Drosophila sechellia]
Length = 448
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+FV R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFVARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|358374136|dbj|GAA90730.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus kawachii IFO
4308]
Length = 390
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
Y+P D +A GDP T+FV RLS+ E L + ++G ++ +R+V+DIVT
Sbjct: 88 YEPSNDQQARGDPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDIVTPKGSKKPH 147
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 148 RGYAFIVYEREKDMKAAYK 166
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P +P+A DP+ T+FVGR+++ TSE LR+ YG++K L +V D G RGYAF
Sbjct: 90 WNPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAF 148
Query: 107 VEYETEREMRRAYEVC 122
+EY + EM AY+
Sbjct: 149 IEYSDKAEMHTAYKKA 164
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y+P D K GDP T+FVG +S+ T+E L++ +YG +K +RL+ D G RGY F
Sbjct: 84 YNPKEDKKLTGDPFRTLFVGGISYDTTEKKLKREFEQYGSIKRVRLIYD-RNGKPRGYGF 142
Query: 107 VEYETEREMRRAYE 120
+E+E +R+M+ AY+
Sbjct: 143 IEFENDRDMKEAYK 156
>gi|195577191|ref|XP_002078456.1| GD22521 [Drosophila simulans]
gi|194190465|gb|EDX04041.1| GD22521 [Drosophila simulans]
Length = 348
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G
Sbjct: 81 LEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESG 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
+GYAF+EYE ER+M AY+
Sbjct: 141 KPKGYAFIEYEHERDMHAAYK 161
>gi|392577664|gb|EIW70793.1| hypothetical protein TREMEDRAFT_73567 [Tremella mesenterica DSM
1558]
Length = 335
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 43 SAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASR 102
S Y P D KA+GDP+ T+F+ RLS +E LR+ YG ++++R+VR+ G S
Sbjct: 136 SEANYRPQDDTKAVGDPYKTLFISRLSSKATEQDLRREFEMYGAIEHIRIVRN-RKGKSN 194
Query: 103 GYAFVEYETEREMRRAYE 120
YAF+ YE ER+M+ AY+
Sbjct: 195 SYAFIVYERERDMKAAYK 212
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKMATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|328766959|gb|EGF77011.1| hypothetical protein BATDEDRAFT_92222 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
+Y+P+ AG+I GT HD A+ L+ A L DP P T+FVGRL+ +
Sbjct: 3 TYNPVTAGNIQGTTGICHDKALI--LIPPDAKL-----DPTITTTPSRTLFVGRLAPSVT 55
Query: 74 EDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+D L YG V R++ + +TG SRGYAFVE E++ ++ A C
Sbjct: 56 QDILADTFRPYGTVLQCRIIVNNITGQSRGYAFVEMESQHDVNAAIRAC 104
>gi|194862752|ref|XP_001970105.1| GG23559 [Drosophila erecta]
gi|190661972|gb|EDV59164.1| GG23559 [Drosophila erecta]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|427781317|gb|JAA56110.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Rhipicephalus pulchellus]
Length = 201
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L+DP + DP T+FV R+++ TSE LR+ +G +K + +V + +TG
Sbjct: 81 LEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITG 140
Query: 100 ASRGYAFVEYETEREMRRAY 119
RGYAFVEYE ER+M Y
Sbjct: 141 KPRGYAFVEYEHERDMHCEY 160
>gi|195471605|ref|XP_002088093.1| GE18384 [Drosophila yakuba]
gi|194174194|gb|EDW87805.1| GE18384 [Drosophila yakuba]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
[Drosophila melanogaster]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
S ++DP D A GD T+FV R+++ T+E LR+ YG +K + +V + +G
Sbjct: 84 SELKMWDPHNDTNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKHSGKP 143
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 144 RGYAFIEYEHERDMHSAYK 162
>gi|67541466|ref|XP_664507.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|40739112|gb|EAA58302.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|259480504|tpe|CBF71696.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa (AFU_orthologue;
AFUA_5G13480) [Aspergillus nidulans FGSC A4]
Length = 373
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT--GAS--- 101
YDP DP+A GDP T+FV RLS+ +E L + ++G ++ +R+V+D VT GA
Sbjct: 88 YDPNSDPQARGDPFKTLFVSRLSYEATEQDLEREFGRFGPIERIRIVKDTVTPKGAKKPH 147
Query: 102 RGYAFVEYETEREMR 116
RGYAF+ YE E++M+
Sbjct: 148 RGYAFIVYEREKDMK 162
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 47/74 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP +A DP T+FV R+++ TSE LR+ YG +K + ++ D TG RGYAF
Sbjct: 88 WDPNQLLEATEDPFKTLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAF 147
Query: 107 VEYETEREMRRAYE 120
+EYE ER+M AY+
Sbjct: 148 IEYEHERDMHAAYK 161
>gi|341897322|gb|EGT53257.1| CBN-RNP-7 protein [Caenorhabditis brenneri]
Length = 320
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P +P+A DP+ T+FVGR+++ TSE LR+ YG++K L +V D G RGYAF
Sbjct: 90 WNPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAF 148
Query: 107 VEYETEREMRRAYEVC 122
+EY + EM AY+
Sbjct: 149 IEYSDKAEMHTAYKKA 164
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P +P+A DP+ T+FVGR+++ TSE LR+ YG++K L +V D G RGYAF
Sbjct: 90 WNPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAF 148
Query: 107 VEYETEREMRRAYEVC 122
+EY + EM AY+
Sbjct: 149 IEYSDKAEMHTAYKKA 164
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|357017377|gb|AET50717.1| hypothetical protein [Eimeria tenella]
Length = 270
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 44 AGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRG 103
A Y PL DP+ GDP T+FVG+LS+ TSE LR+ YG V+ +R+VRD G RG
Sbjct: 81 AEAYRPLEDPRIQGDPFATLFVGKLSYETSEKKLRREFEVYGPVRRVRVVRD-PRGRPRG 139
Query: 104 YAFVEYETEREMRRAYE 120
YAFVE+E +R+M+ AY+
Sbjct: 140 YAFVEFERDRDMKEAYK 156
>gi|30802167|gb|AAH51414.1| Snrnp70 protein [Mus musculus]
Length = 186
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ ++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G
Sbjct: 82 TELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKP 141
Query: 102 RGYAFVEYETEREMRRAY 119
RGYAF+EYE ER+M Y
Sbjct: 142 RGYAFIEYEHERDMHCEY 159
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L++P + DP T+FV R+++ TSE LR+ +G +K + +V + +TG
Sbjct: 81 LEQDIALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITG 140
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAFVEYE ER+M AY+
Sbjct: 141 KPRGYAFVEYEHERDMHSAYK 161
>gi|157816921|ref|NP_001101953.1| U1 small nuclear ribonucleoprotein 70 kDa [Rattus norvegicus]
gi|337443|gb|AAA36571.1| ribonucleoprotein antigen [Homo sapiens]
gi|26346286|dbj|BAC36794.1| unnamed protein product [Mus musculus]
gi|29165791|gb|AAH49128.1| Snrnp70 protein [Mus musculus]
gi|119572834|gb|EAW52449.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_d [Homo sapiens]
gi|148690899|gb|EDL22846.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690900|gb|EDL22847.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690902|gb|EDL22849.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|149055930|gb|EDM07361.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055932|gb|EDM07363.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055935|gb|EDM07366.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|193788471|dbj|BAG53365.1| unnamed protein product [Homo sapiens]
gi|417396419|gb|JAA45243.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Desmodus rotundus]
Length = 166
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ ++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G
Sbjct: 84 TELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKP 143
Query: 102 RGYAFVEYETEREM 115
RGYAF+EYE ER+M
Sbjct: 144 RGYAFIEYEHERDM 157
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L++P P DP+ T+FV R+++ T+E+ +R+ YG +K +R+V++ + RGY
Sbjct: 90 ALWNPNEIPSGTKDPYKTLFVARINYDTTENKIRREFEGYGPIKTIRMVKNAMNNKPRGY 149
Query: 105 AFVEYETEREMRRAYE 120
F+EYE ER+M AY+
Sbjct: 150 CFIEYEHERDMHAAYK 165
>gi|149055931|gb|EDM07362.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 167
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ ++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G
Sbjct: 84 TELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKP 143
Query: 102 RGYAFVEYETEREM 115
RGYAF+EYE ER+M
Sbjct: 144 RGYAFIEYEHERDM 157
>gi|410982448|ref|XP_003997569.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Felis catus]
Length = 438
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYETEREMRRAY 119
F+EYE ER+M Y
Sbjct: 148 FIEYEHERDMHCEY 161
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKN-------------LRLV 93
YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV
Sbjct: 125 YDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGFIRLLVRLV 184
Query: 94 RDIVTGASRGYAFVEYETEREMRRAYE 120
D T RGYAF+EY R+M+ AY+
Sbjct: 185 TDKETNKPRGYAFIEYMHTRDMKNAYK 211
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P D K GDP T+ V RLS+ T E TL+K YG +K +R++ D +G +GYAF
Sbjct: 106 WNPYKDQKIKGDPFKTIVVSRLSYKTDEKTLKKEFEVYGPIKRVRIIIDQHSGKPKGYAF 165
Query: 107 VEYETEREMRRAYE 120
+EY+ ER+ + A E
Sbjct: 166 IEYDNERDFQLALE 179
>gi|195050851|ref|XP_001992981.1| GH13577 [Drosophila grimshawi]
gi|193900040|gb|EDV98906.1| GH13577 [Drosophila grimshawi]
Length = 465
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQDSGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
+Y P D +A+GDP T+F+ RL ++ LR+ +G ++ +R+VRD G SRGYA
Sbjct: 103 IYKPADDAEAVGDPFKTLFIARLHKSATDSDLRREFEGFGSIERVRIVRD-KRGRSRGYA 161
Query: 106 FVEYETEREMRRAYE 120
F+ +E ER+M+ AY+
Sbjct: 162 FIVFERERDMKAAYK 176
>gi|115399498|ref|XP_001215338.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192221|gb|EAU33921.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
+DP DP+A GDP T+FV RLS+ E L + ++G ++ +R+V+D VT
Sbjct: 88 FDPSKDPQARGDPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDNVTPKGSKKPH 147
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 148 RGYAFIVYEREKDMKAAYK 166
>gi|195387576|ref|XP_002052470.1| GJ21434 [Drosophila virilis]
gi|194148927|gb|EDW64625.1| GJ21434 [Drosophila virilis]
Length = 454
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L+DP A DP T+F+ R+++ TSE LR+ YG +K + L+ D +G +GY
Sbjct: 86 ALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQDSGKPKGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEHERDMHAAYK 161
>gi|825725|emb|CAA29964.1| hU1-70K-like protein (216 AA) [Homo sapiens]
Length = 216
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 138 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 197
Query: 106 FVEYETEREM 115
F+EYE ER+M
Sbjct: 198 FIEYEHERDM 207
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKN-------------LRLV 93
YDP DP A GDP+ T+FV RL++ TSE +++ YG +K +RLV
Sbjct: 125 YDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGFIRLLVRLV 184
Query: 94 RDIVTGASRGYAFVEYETEREMRRAYE 120
D T RGYAF+EY R+M+ AY+
Sbjct: 185 TDKETNKPRGYAFIEYMHTRDMKNAYK 211
>gi|67623601|ref|XP_668083.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659281|gb|EAL37866.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis]
Length = 281
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 47 YDPLGD--PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
Y+P+ D DP+ T+F+ RL++ T+E TL++ + YG++ NLR+V+D G SRGY
Sbjct: 87 YNPMEDNVDNKTFDPYNTLFIARLNYDTTERTLKRELEVYGKILNLRIVKDF-QGESRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AFVE++ E ++ AY+
Sbjct: 146 AFVEFDNEDSLKEAYK 161
>gi|393241484|gb|EJD49006.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 363
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +A+GDP+ T+F+ RLS ++ LR+A YG ++ +R+ RD G SRGYAF
Sbjct: 109 YKPSEDTEAVGDPYKTLFIARLSKNAADADLRRAFESYGPIERVRIARD-KKGRSRGYAF 167
Query: 107 VEYETEREMRRAYE 120
+ ++ ER+M+ AY+
Sbjct: 168 IVFDRERDMKVAYK 181
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP DPK GDP+ T+ V RLS+ ++ LR+ ++G +K +R+V D G RGYAF
Sbjct: 137 FDPNKDPKIEGDPYKTIIVARLSYDVTDKKLRREFEEFGPIKRVRIVTD-KQGKPRGYAF 195
Query: 107 VEYETEREMRRAYE 120
+E+E + +M+ AY+
Sbjct: 196 IEFEHKADMKEAYK 209
>gi|224004248|ref|XP_002295775.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
gi|209585807|gb|ACI64492.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
Length = 174
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+ T+FVGRL++ +E L + M YG VK+L+L+ D TG SRGYAFVEYE E +M+RA+
Sbjct: 76 YNTLFVGRLAYEVTERKLLREMESYGPVKDLKLITDCKTGKSRGYAFVEYEKEDDMKRAF 135
Query: 120 EVC 122
Sbjct: 136 RAA 138
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 35 ICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVR 94
+ + L ++P DP GDP+ T+FVGRL++ +E L+K SKYG V+ +R+VR
Sbjct: 55 LNKQKLDEDFAKWNPSEDPHIKGDPYKTLFVGRLNYEVTEIDLQKEFSKYGEVERVRVVR 114
Query: 95 DIVTGASRGYAFV 107
D T S+GYAF+
Sbjct: 115 DKDTSKSKGYAFI 127
>gi|213410617|ref|XP_002176078.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
gi|212004125|gb|EEB09785.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
Length = 270
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P D +GDP+ T+F+GRLS+ T E + + +YG + +R+VRD + RGYAF
Sbjct: 86 WNPDEDRNIVGDPYKTIFIGRLSYDTKESEIEREFIRYGPIDRIRIVRDKDSDKPRGYAF 145
Query: 107 VEYETEREMRRAYEVC 122
V +E ER+++ AY
Sbjct: 146 VVFERERDLKAAYRAS 161
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ ++DP D A GD T+FV R+++ T+E LR+ YG +K + +V +G
Sbjct: 84 TELKMWDPHNDSNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKP 143
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+EYE ER+M AY+
Sbjct: 144 RGYAFIEYEHERDMHSAYK 162
>gi|392594814|gb|EIW84138.1| hypothetical protein CONPUDRAFT_51126 [Coniophora puteana
RWD-64-598 SS2]
Length = 177
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +AIGDP+ T+F+ RL +E LR+ YG ++ +R+VR+ G SRGYAF
Sbjct: 104 YKPADDAEAIGDPYKTLFISRLHKAATESDLRREFESYGTIERVRIVRN-KNGRSRGYAF 162
Query: 107 VEYETEREMR 116
+ YE ER+M+
Sbjct: 163 IVYERERDMK 172
>gi|209877242|ref|XP_002140063.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555669|gb|EEA05714.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 294
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP+ T+FVGRLS+ T+E TLRK YG +K + L+ D+ G S+GYAF+EYE+E ++
Sbjct: 100 DPYNTLFVGRLSYDTTERTLRKEFETYGPIKKICLITDL-NGQSKGYAFIEYESESSLKE 158
Query: 118 AY 119
AY
Sbjct: 159 AY 160
>gi|375073667|gb|AFA34392.1| U1 small nuclear ribonucleoprotein 70KDa, partial [Ostrea edulis]
Length = 162
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L L+DP A GDP+ T+FV R+++ TSE LR+ YG ++ + L+ D +G
Sbjct: 88 LEQDLALWDPSN--AATGDPYKTLFVARINYDTSESKLRREFEVYGPIRKISLLSDKSSG 145
Query: 100 ASRGYAFVEYETEREM 115
RGYAF+E+E ER+M
Sbjct: 146 KPRGYAFIEFEHERDM 161
>gi|145249558|ref|XP_001401118.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus niger CBS
513.88]
gi|134081800|emb|CAK42056.1| unnamed protein product [Aspergillus niger]
gi|350639553|gb|EHA27907.1| hypothetical protein ASPNIDRAFT_201684 [Aspergillus niger ATCC
1015]
Length = 389
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
Y+P D +A GDP T+FV RLS+ E L + ++G ++ +R+V+D VT
Sbjct: 88 YEPSNDQQARGDPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPH 147
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 148 RGYAFIVYEREKDMKAAYK 166
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L A Y+P DP GDP+ T+FV RLS+ E L + ++G + +RLVRD +
Sbjct: 79 LKQGAENYNPGEDPHIRGDPYKTLFVSRLSYDVKEQDLEREFGRFGPIDRIRLVRDKESK 138
Query: 100 ASRGYAFVEYETEREMRRAYEVC 122
RGYAF+ +E E++M+ A++
Sbjct: 139 KPRGYAFILFEREKDMKAAFKET 161
>gi|430811873|emb|CCJ30667.1| unnamed protein product [Pneumocystis jirovecii]
Length = 177
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
Y Y P ++ I ++ Y P DP GDP+ T+FV RLS+
Sbjct: 50 YDKDYQPTESWLEKRERRREEKKKIQEEVIRKGLAAYRPRQDPNIKGDPYKTLFVSRLSY 109
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+E L + +YG ++ +RLV ++ GYAF+ YE ER+M+ Y+
Sbjct: 110 KVTEQDLMREFGRYGAIERIRLVTNVKNNKPMGYAFIVYERERDMKGLYK 159
>gi|403362965|gb|EJY81219.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 170
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y PI+ G DG HDNA+ RA S L+D + I FV TSE
Sbjct: 16 YDPIKVGFKDGRGKQCHDNALYRASKASYESLFDSQQNKNKI-------FVSNFVPRTSE 68
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
L SK+G +K ++++RD VTG SRGY+F+E+ + +AY
Sbjct: 69 RDLVNHFSKHGEIKEIQIIRDKVTGCSRGYSFIEFYKRDDAFQAY 113
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP+ T+F+ RL++ T+E TL++ + YG++ NLR+V+D G SRGYAFVE++ E ++
Sbjct: 100 DPYNTLFIARLNYDTTERTLKRELEVYGKILNLRIVKDF-QGESRGYAFVEFDNEDSLKE 158
Query: 118 AYE 120
AY+
Sbjct: 159 AYK 161
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP +A DP T+F+ R+++ TSE LR+ YG +K + ++ D +G RGYAF
Sbjct: 218 WDPNQLLEATEDPFKTLFIARINYDTSESKLRREFEMYGNIKKIIMINDKNSGKPRGYAF 277
Query: 107 VEYETEREMRRAYE 120
+EYE ER+M AY+
Sbjct: 278 IEYEHERDMHAAYK 291
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y+P D K GDP T+FV +S+ T+E L++ +YG +K +RL+ D G RGY F
Sbjct: 84 YNPKEDKKLTGDPFRTLFVAGISYDTTEKKLKREFDQYGSIKRVRLIYD-RNGKPRGYGF 142
Query: 107 VEYETEREMRRAYE 120
+E+E +R+M+ AY+
Sbjct: 143 IEFENDRDMKEAYK 156
>gi|70997103|ref|XP_753306.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|66850942|gb|EAL91268.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|159126968|gb|EDP52084.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
A1163]
Length = 395
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
YDP DP+A GDP T+FV RLS+ E L + ++G ++ +R+V+D VT
Sbjct: 88 YDPSNDPQARGDPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPH 147
Query: 102 RGYAFVEYETEREMR 116
RGYAF+ YE E++M+
Sbjct: 148 RGYAFIVYEREKDMK 162
>gi|389749680|gb|EIM90851.1| hypothetical protein STEHIDRAFT_118087 [Stereum hirsutum FP-91666
SS1]
Length = 180
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +A+GDP+ T+F+ RL +E +R+ YG ++ +R+V+D G SRGYAF
Sbjct: 106 YKPAEDAEAVGDPYKTLFIARLHKTATETDIRREFETYGTIERVRIVKD-KKGRSRGYAF 164
Query: 107 VEYETEREMR 116
V YE ER+M+
Sbjct: 165 VVYERERDMK 174
>gi|219112155|ref|XP_002177829.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410714|gb|EEC50643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
T+F+GRL++ +E L + M +G VK++R+++D G SRGYAFVEYE E +M+RAY
Sbjct: 99 TLFIGRLAYEVTERKLLREMESFGPVKDIRIIKDSKEGKSRGYAFVEYEHEEDMKRAY 156
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P + +A DP+ T+FVGR+++ TSE LR+ YG++K L +V D +G RGYAF
Sbjct: 90 WNPAENSRATEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-ESGKPRGYAF 148
Query: 107 VEYETEREMRRAYEVC 122
+EY + EM AY+
Sbjct: 149 IEYSDKAEMHTAYKKA 164
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
L++P A DP T+FV R+++ TSE LR+ YG +K + + + + G RGY
Sbjct: 86 ALWEPHSVANATTDPFKTLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGY 145
Query: 105 AFVEYETEREMRRAYE 120
AF+EYE ER+M AY+
Sbjct: 146 AFIEYEYERDMHSAYK 161
>gi|353241024|emb|CCA72864.1| related to SNP1-U1 small nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P+ +P A GDP+ T+FV RL +E+ LR+ +G + +++V++ G SRGYAF
Sbjct: 105 YRPVDNPDAQGDPYKTLFVARLPKKATENDLRREFEMFGVIARIKIVKN-KNGNSRGYAF 163
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 164 IVYERERDMKVAYK 177
>gi|399218189|emb|CCF75076.1| unnamed protein product [Babesia microti strain RI]
Length = 331
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP DP+ T+F+G L++ +E LR YG++K +R++ D G RGYAF
Sbjct: 84 YDPKSGNSLTHDPYKTLFIGNLAYEATERQLRSEFEAYGKIKRIRIIAD-ANGNPRGYAF 142
Query: 107 VEYETEREMRRAYE 120
+E++TEREM AY+
Sbjct: 143 IEFDTEREMVNAYK 156
>gi|157140206|ref|XP_001647625.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108866540|gb|EAT32293.1| AAEL015585-PA [Aedes aegypti]
Length = 176
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L +DP +A DP T+FV R+++ TSE LR+ YG++ + ++ D TG
Sbjct: 81 LEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRREFETYGKIVKIIIIHDKETG 140
Query: 100 ASRGYAFVEYETEREMRRAY 119
RGYAF+EYE ER+M Y
Sbjct: 141 KPRGYAFIEYEHERDMHCKY 160
>gi|449542311|gb|EMD33290.1| hypothetical protein CERSUDRAFT_117917 [Ceriporiopsis subvermispora
B]
Length = 378
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P +P+ +GDP+ T+FV L +E+ +R+ ++G ++ +R+VRD G SR YAF
Sbjct: 104 YKPQENPEVVGDPYKTLFVAHLPKHATENDVRREFERFGSLERVRIVRD-KRGNSRKYAF 162
Query: 107 VEYETEREMRRAYE 120
V +E ER+M+ A++
Sbjct: 163 VVFERERDMKAAFK 176
>gi|157129097|ref|XP_001661606.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872354|gb|EAT36579.1| AAEL011340-PB [Aedes aegypti]
Length = 189
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP +A DP T+FV R+++ TSE LR+ YG++ + ++ D TG RGYAF
Sbjct: 88 WDPNQLAEATQDPFKTLFVARINYDTSESKLRREFETYGKIVKIIIIHDKETGKPRGYAF 147
Query: 107 VEYETEREM 115
+EYE ER+M
Sbjct: 148 IEYEHERDM 156
>gi|388857223|emb|CCF49236.1| related to SNP1-U1 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 364
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P + A DP+ T+F+ RLS+ T+E L + YG ++ + L+R+ G SRGYAF
Sbjct: 119 YKPNQNANATADPYKTLFLARLSYDTTEKDLHRQFEVYGPIQQITLIRN-KQGKSRGYAF 177
Query: 107 VEYETEREMRRAYE 120
+ YE+ER+M+ AY+
Sbjct: 178 IAYESERDMKAAYK 191
>gi|157129095|ref|XP_001661605.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872353|gb|EAT36578.1| AAEL011340-PA [Aedes aegypti]
Length = 186
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+DP +A DP T+FV R+++ TSE LR+ YG++ + ++ D TG RGYAF
Sbjct: 88 WDPNQLAEATQDPFKTLFVARINYDTSESKLRREFETYGKIVKIIIIHDKETGKPRGYAF 147
Query: 107 VEYETEREM 115
+EYE ER+M
Sbjct: 148 IEYEHERDM 156
>gi|255077010|ref|XP_002502160.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
gi|226517425|gb|ACO63418.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
Length = 465
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 47 YDPLGDPK-AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++P DPK A DP+ T+FVGRLS+ E LR+ ++G VK++ +V D G RGYA
Sbjct: 154 WNPKEDPKLADSDPYKTLFVGRLSYDVDEAALRREFERFGAVKSVTVVED-QDGKPRGYA 212
Query: 106 FVEYETEREMRRAY 119
FVE++ E +M+ AY
Sbjct: 213 FVEFDRESDMKHAY 226
>gi|323447116|gb|EGB03066.1| hypothetical protein AURANDRAFT_34517 [Aureococcus anophagefferens]
Length = 229
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 38 ALLCSSAGLYDPLGDPKAI-----GDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRL 92
A L ++ +DP P A+ GD + T+FV RLS+ T+E LR+ ++G +K LR+
Sbjct: 16 ARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRV 75
Query: 93 V--RD------------IVTGASRGYAFVEYETEREMRRAYE 120
V RD + G RGYAFVE+E E +MR AY+
Sbjct: 76 VHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYK 117
>gi|323455541|gb|EGB11409.1| hypothetical protein AURANDRAFT_14747, partial [Aureococcus
anophagefferens]
Length = 215
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 38 ALLCSSAGLYDPLGDPKAI-----GDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRL 92
A L ++ +DP P A+ GD + T+FV RLS+ T+E LR+ ++G +K LR+
Sbjct: 70 ARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRV 129
Query: 93 V--RD------------IVTGASRGYAFVEYETEREMRRAYE 120
V RD + G RGYAFVE+E E +MR AY+
Sbjct: 130 VHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYK 171
>gi|428186025|gb|EKX54876.1| hypothetical protein GUITHDRAFT_45393, partial [Guillardia theta
CCMP2712]
Length = 200
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
+ PI+ I + + + + A +DP D + T+FVGRLS T
Sbjct: 57 KFKPIEQRKERRERIAEERKTLSQDTVKAKAAAWDP-SSYSFESDAYKTLFVGRLSFMTD 115
Query: 74 EDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
E L++ M +YG VK+ LV D T RGY FVE+E ER+M+ AY+
Sbjct: 116 EHKLKREMEQYGPVKSAVLVYDKDTSKPRGYGFVEFEHERDMKTAYK 162
>gi|378726735|gb|EHY53194.1| U1 small nuclear ribonucleoprotein 70kDa [Exophiala dermatitidis
NIH/UT8656]
Length = 377
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT----GASR 102
Y P DPK GD T+FVGRLS+ E L + ++G ++ +R+V+D T R
Sbjct: 90 YRPQDDPKIKGDAAKTLFVGRLSYDVKEADLEREFGRFGPIERIRIVKDETTPKPKKPHR 149
Query: 103 GYAFVEYETEREMRRAYE 120
GYAF+ +E E++MR AY+
Sbjct: 150 GYAFIVFEREKDMRAAYK 167
>gi|294955087|ref|XP_002788400.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
gi|239903800|gb|EER20196.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
Length = 877
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P + K GDP T+FV R+++ T+E L++ +YG ++ + ++ D+ G SRGYAF
Sbjct: 87 YKPQNNDKVSGDPFKTLFVARVAYETTEKQLQRIFGEYGPIRKVTIIHDL-EGRSRGYAF 145
Query: 107 VEYETEREMRRAYE 120
+EY+ E +++AY+
Sbjct: 146 IEYDNENSLKQAYK 159
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+ P +P A DP+ T+FV R+++ TSE LR+ ++G++ L LV D G RGYAF
Sbjct: 130 WSPAQNPSATVDPYKTLFVARINYETSESKLRREFEQFGKITRLALVHD-KNGKPRGYAF 188
Query: 107 VEYETEREMRRAYE 120
+EY+ + M AY+
Sbjct: 189 IEYQHKESMSEAYK 202
>gi|345490458|ref|XP_003426382.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like, partial [Nasonia vitripennis]
Length = 103
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 11 YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSH 70
YA Y P++AGSIDGTD PHD A+ RA+ Y+P K+ P T+FV R
Sbjct: 18 YAKEYDPLKAGSIDGTDTEPHDRAVTRAINSH----YEPPHGLKS--KPERTLFVSRFGP 71
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+ L+ SK+G V + +++ D+VTG S
Sbjct: 72 SVDKHDLKDFFSKFGEVVSTQVIYDVVTGHS 102
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P +P A D + T+F+ RL + +E L + YG ++ ++L+RD G SRGYAF
Sbjct: 117 YKPSNNPDATPDAYKTLFLARLDYSVTESDLHREFDMYGPIEQIKLIRD-KNGKSRGYAF 175
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 176 IAYERERDMKAAYK 189
>gi|402590301|gb|EJW84232.1| hypothetical protein WUBG_04858, partial [Wuchereria bancrofti]
Length = 156
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P +P A DP+ T+FV R+++ TSE LR+ ++G++ L LV D G RGYAF
Sbjct: 88 WNPAQNPSATADPYKTLFVARINYETSESKLRREFEQFGKITRLALVHD-KNGKPRGYAF 146
Query: 107 VEYETEREM 115
+EY+ + M
Sbjct: 147 IEYQHKESM 155
>gi|255953297|ref|XP_002567401.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589112|emb|CAP95234.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----R 102
Y+P DP+ GDP T+FV RLS+ T E L + ++G ++ + +V+D V+ R
Sbjct: 88 YNPDKDPQVRGDPFKTIFVSRLSYDTKETDLEREFGRFGPIERISIVKDTVSDKKKKPHR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GY FV +E E++M+ AY+
Sbjct: 148 GYGFVVFEREKDMKAAYK 165
>gi|425780249|gb|EKV18264.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
PHI26]
Length = 408
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----R 102
Y P +P+A GDP T+FVGRL++ E L + ++G ++ + +V+D V+ R
Sbjct: 88 YKPKENPQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISIVKDTVSDKKKKPHR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAFV +E E++MR AY+
Sbjct: 148 GYAFVVFEREKDMRAAYK 165
>gi|425767063|gb|EKV05646.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
Pd1]
Length = 408
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----R 102
Y P +P+A GDP T+FVGRL++ E L + ++G ++ + +V+D V+ R
Sbjct: 88 YKPKENPQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISIVKDTVSDKKKKPHR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAFV +E E++MR AY+
Sbjct: 148 GYAFVVFEREKDMRAAYK 165
>gi|242223332|ref|XP_002477305.1| predicted protein [Postia placenta Mad-698-R]
gi|220723223|gb|EED77497.1| predicted protein [Postia placenta Mad-698-R]
Length = 168
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P D +A+GDP+ T+F+ RL +++ LR+ +G ++ +R+VRD G SRGYAF
Sbjct: 101 YKPSEDAEAVGDPYKTLFIARLHKSATDNDLRREFEGFGSIERVRIVRD-KKGRSRGYAF 159
Query: 107 VEYETEREM 115
+ +E ER+M
Sbjct: 160 IVFERERDM 168
>gi|148225156|ref|NP_001081603.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus laevis]
gi|80479195|gb|AAI08448.1| LOC397946 protein [Xenopus laevis]
Length = 471
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---VTGASR 102
++DP D A GD T+FV R+++ T+E LR+ YG +K + +V + +G R
Sbjct: 88 IWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAF+EYE ER+M AY+
Sbjct: 148 GYAFIEYEHERDMHSAYK 165
>gi|134091|sp|P09406.1|RU17_XENLA RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|65179|emb|CAA30972.1| U1 70K [Xenopus laevis]
Length = 471
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---VTGASR 102
++DP D A GD T+FV R+++ T+E LR+ YG +K + +V + +G R
Sbjct: 88 IWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAF+EYE ER+M AY+
Sbjct: 148 GYAFIEYEHERDMHSAYK 165
>gi|242761917|ref|XP_002340274.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
gi|218723470|gb|EED22887.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
Length = 381
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
LL YDP D + GDP T+FV RLS+ E L + ++G ++ +R+V+D
Sbjct: 80 LLTEGVEKYDPSNDAQIRGDPFRTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTEK 139
Query: 99 GAS----RGYAFVEYETEREMRRAYE 120
S RGYAF+ YE E++M+ AY+
Sbjct: 140 QNSKKPHRGYAFIVYEREKDMKAAYK 165
>gi|325190173|emb|CCA24652.1| hypothetical protein TRIADDRAFT_51837 [Albugo laibachii Nc14]
Length = 305
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 40 LCSSAGLYDP-LGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
L +DP + D + D + T+FVGR+S+ T+E LR ++G +K++RLV +
Sbjct: 96 LKQEIAKWDPAVQDDRKTEDAYKTLFVGRISYETTEKQLRHEFEQFGAIKHIRLV-EGEE 154
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
G SRGYAF+EYE E +++ AY+
Sbjct: 155 GKSRGYAFIEYEHEADLKAAYKFA 178
>gi|189199498|ref|XP_001936086.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983185|gb|EDU48673.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 408
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGA------ 100
Y P DPK GD T+FV RL++ + D L + +YG ++ +R+V D+ A
Sbjct: 88 YKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLEREFGRYGPIERIRIVEDVTQPADAPLKK 147
Query: 101 -SRGYAFVEYETEREMRRAYE 120
RGYAF+ +E E++M+ AY+
Sbjct: 148 RKRGYAFIVFEREKDMKAAYK 168
>gi|330795602|ref|XP_003285861.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
gi|325084166|gb|EGC37600.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
Length = 419
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 47 YDPLGDPKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS-RGY 104
+DP P+ GDP+ T+FV R+S+ T++ L S++G +K++ LV+D RGY
Sbjct: 85 WDPYSHPELHTGDPYKTIFVSRISYQTTQKKLEYEFSQFGNIKSIYLVKDPKNPQKHRGY 144
Query: 105 AFVEYETEREMRRAYE 120
AF+E+E ER+M+ AY+
Sbjct: 145 AFIEFERERDMKAAYK 160
>gi|320586925|gb|EFW99588.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 428
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
Y P DP GDP T+ V RLS+ +E L + ++YG ++ +R+++D
Sbjct: 88 YKPADDPNIRGDPFKTLIVARLSYEATEQDLEREFARYGPIERIRIIKDTHADEKGNKKR 147
Query: 102 ---RGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A++ C
Sbjct: 148 KPHRGYAFVVFEREKDMRAAHDAC 171
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 29 HPHDNAICRALLCSSAGLYDPLGDPK-AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRV 87
H DN A L ++P DP DP T+FVGRL + T+E L++ SK+G +
Sbjct: 76 HAKDNEY--AKLNQETRGWEPHKDPNIKETDPFKTIFVGRLPYDTTEMELQREFSKFGDI 133
Query: 88 KNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVCG 123
+ +R+VRD VT S+GYAFV + + R A + G
Sbjct: 134 ERIRVVRDKVTNKSKGYAFVLFTNPQSSRMACKEIG 169
>gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404), partial [Xenopus laevis]
Length = 267
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---VTGASR 102
++DP D A GD T+FV R+++ T+E LR+ YG +K + +V + +G R
Sbjct: 88 IWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAF+EYE ER+M AY+
Sbjct: 148 GYAFIEYEHERDMHSAYK 165
>gi|170583875|ref|XP_001896768.1| RNA binding protein [Brugia malayi]
gi|158595926|gb|EDP34382.1| RNA binding protein, putative [Brugia malayi]
Length = 189
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
++P +P A DP+ T+FV R+++ TSE LR+ ++G++ L LV D G RGYAF
Sbjct: 115 WNPAQNPSATTDPYKTLFVARINYETSESKLRREFEQFGKITRLALVHD-KNGKPRGYAF 173
Query: 107 VEYETEREM 115
+EY+ + M
Sbjct: 174 IEYQHKESM 182
>gi|66910786|gb|AAH97714.1| LOC397946 protein [Xenopus laevis]
Length = 351
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---VTGASR 102
++DP D A GD T+FV R+++ T+E LR+ YG +K + +V + +G R
Sbjct: 88 IWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAF+EYE ER+M AY+
Sbjct: 148 GYAFIEYEHERDMHSAYK 165
>gi|14028993|gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 491
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 28/102 (27%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKN----------------- 89
YDP DP A GDP+ T+FV RL++ TSE +++ YG +K
Sbjct: 125 YDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRQTSLKNVGDGTTYLQAW 184
Query: 90 -----------LRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+RLV D T RGYAF+EY R+M+ AY+
Sbjct: 185 GFYILGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYK 226
>gi|338762844|gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKN----------------- 89
YDP DP GDP+ T+FV RL++ T+E +++ YG +K
Sbjct: 124 YDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGAIKRVGIKEHRECALVIGFWF 183
Query: 90 LRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+RLV D T RGYAF+EY R+M+ AY+
Sbjct: 184 VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQA 216
>gi|396477011|ref|XP_003840172.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
gi|312216743|emb|CBX96693.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
Length = 398
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT-------G 99
Y P DPK GD T+FV RL++ + D L + +YG ++ +R+V DI
Sbjct: 88 YKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLEREFGRYGPIERIRIVEDITAPPDAPPKK 147
Query: 100 ASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 148 RKRGYAFIVYEREKDMKAAYK 168
>gi|452819521|gb|EME26578.1| U1 small nuclear ribonucleoprotein 70kDa [Galdieria sulphuraria]
Length = 259
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P +P A D T+F+ RL T++ L+ + +G+VK ++L TG +GYAF
Sbjct: 105 YSPPSEPNATSDAQKTLFIARLKPETTQLKLQAELEAFGKVKEIKLPISQKTGLPKGYAF 164
Query: 107 VEYETEREMRRA 118
VE++ ER+MR A
Sbjct: 165 VEFQKERDMREA 176
>gi|296816264|ref|XP_002848469.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841494|gb|EEQ31156.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 414
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 43 SAGL--YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---- 96
+AGL Y+P DP+ GDP T+FV RLS+ E L + ++G ++ +R+V+D
Sbjct: 82 AAGLTEYNPSEDPQIRGDPFRTLFVSRLSYEVKEADLEREFGRFGPIERIRIVKDTKNPN 141
Query: 97 VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 142 PKKPHRGYAFIVYEREKDMKAAYK 165
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P + A D + T+F+ RLS+ +E L + YG ++ +RLVRD G SRGYAF
Sbjct: 112 YAPASNAAATPDAYKTLFLARLSYDVTEKDLHREFDMYGPIETIRLVRD-RNGKSRGYAF 170
Query: 107 VEYETEREMRRAYE 120
+ YE ER+M+ AY+
Sbjct: 171 IAYERERDMKAAYK 184
>gi|324518187|gb|ADY47028.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 311
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+ P +P A DP+ T+FV R+++ TSE LR+ ++G++ L LV D G RGYAF
Sbjct: 82 WAPAENPTATTDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHD-PNGKPRGYAF 140
Query: 107 VEYETEREMRRAYEVC 122
+EY+ + M AY+
Sbjct: 141 IEYQHKENMSEAYKKA 156
>gi|90076320|dbj|BAE87840.1| unnamed protein product [Macaca fascicularis]
Length = 344
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP DP A GD T+FV R+++ T+E LR+ YG +K + +V +G RGYA
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 106 FVEYE 110
F+EYE
Sbjct: 148 FIEYE 152
>gi|269859935|ref|XP_002649691.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|269863259|ref|XP_002651156.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065037|gb|EED42901.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220066886|gb|EED44356.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 241
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+ P+ +P P CTVF+G + E+T+ K +S G+VK+ RL+ D TG S+GY F
Sbjct: 24 FSPMTEP---SKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGF 80
Query: 107 VEYET 111
EYET
Sbjct: 81 CEYET 85
>gi|451995589|gb|EMD88057.1| hypothetical protein COCHEDRAFT_1070524, partial [Cochliobolus
heterostrophus C5]
Length = 247
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGA------ 100
Y P DPK GD T+FV RLS+ + D L + +YG ++ +R+V DI
Sbjct: 88 YKPSEDPKVQGDAFKTLFVSRLSYGVTSDDLEREFGRYGPIERIRIVEDITQPEDAPPKK 147
Query: 101 -SRGYAFVEYETEREMRRAYE 120
RGYAF+ +E E++M+ AY+
Sbjct: 148 RKRGYAFIVFEREKDMKAAYK 168
>gi|366993981|ref|XP_003676755.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
gi|342302622|emb|CCC70398.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
Length = 321
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
+DP DP DP+ T+F+GRL + T+E L+K K+G ++ +R+VRD +T S+GYA
Sbjct: 91 WDPHNDPNIKDTDPYRTIFIGRLPYDTTELELQKLFVKFGEIEKIRIVRDKLTNKSKGYA 150
Query: 106 FVEYETEREMRRAYEVCG 123
F+ + + A++ G
Sbjct: 151 FIVFLDPMSSKMAFKEIG 168
>gi|66828257|ref|XP_647483.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
gi|74997505|sp|Q55FQ0.1|RU17_DICDI RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|60475520|gb|EAL73455.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASR-GYA 105
+DP + + GDP+ T+FV R+S+ T++ L ++G +K+L LV+D GYA
Sbjct: 85 WDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLFLVKDSNNPEKHTGYA 144
Query: 106 FVEYETEREMRRAYE 120
F+E+E ER+M+ AY+
Sbjct: 145 FIEFERERDMKAAYK 159
>gi|124514052|ref|XP_001350382.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23615799|emb|CAD52791.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 423
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP + DP T+F+GRLS+ SE L+K YG++K ++++ D RGYAF
Sbjct: 84 YDPFKNEDLTSDPKKTLFIGRLSYEVSEQKLKKEFESYGKIKTVKIIYD-KNLKPRGYAF 142
Query: 107 VEYETEREMRRAYEV 121
+E+E + M AY++
Sbjct: 143 IEFEHTKSMNDAYKL 157
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 35 ICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVR 94
+C+ L + +D + A + T+F+ R+++ T+E LR+ YG +K + +
Sbjct: 76 MCKQKLENEVEEWDAHSNASATSNAFKTLFIARVNYDTTESKLRREFESYGPIKMISIAH 135
Query: 95 DIVTGASRGYAFVEYETEREMRRAYE 120
DI TG +GYAF+EY ER+M AY+
Sbjct: 136 DINTGKPKGYAFIEYAHERDMHSAYK 161
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y P + +A D + T+F+ RL++ +E L + YG ++ +RLVRD G SRGYAF
Sbjct: 116 YKPHDNAEATPDAYKTLFLARLAYDVTEKDLHREFDMYGPIETIRLVRD-REGKSRGYAF 174
Query: 107 VEYETEREMRRAYE 120
+ YE ER+MR A++
Sbjct: 175 IAYERERDMRAAWK 188
>gi|324508872|gb|ADY43741.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 121
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+ P +P A DP+ T+FV R+++ TSE LR+ ++G++ L LV D G RGYAF
Sbjct: 52 WAPAENPTATTDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHD-PNGKPRGYAF 110
Query: 107 VEYETEREM 115
+EY+ + M
Sbjct: 111 IEYQHKENM 119
>gi|330931076|ref|XP_003303260.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
gi|311320862|gb|EFQ88659.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
Length = 402
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGA------ 100
Y P DPK GD T+FV RL++ + D L + +YG ++ +R+V D+ A
Sbjct: 88 YKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLEREFGRYGPIERIRIVEDVTQPADAPLKK 147
Query: 101 -SRGYAFVEYETEREMRRAYE 120
RGYAF+ +E E++M+ AY+
Sbjct: 148 RKRGYAFIVFEREKDMKAAYK 168
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 14 SYHP--IQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPK-AIGDPHCTVFVGRLSH 70
S HP + G +D + + + L + +++P DP A DP+ T+FVGRL
Sbjct: 52 SEHPEGSENGHLDAYNAAENARQVEAKALNAKLAIWNPDEDPNIADSDPYRTIFVGRLPF 111
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+E L+K ++G ++ +R+VRD + SRGY F+ ++ E R A
Sbjct: 112 AVTEVELQKEFVRFGEIEKVRVVRDKTSNKSRGYGFIMFKDEISARSA 159
>gi|340959550|gb|EGS20731.1| U1 small nuclear ribonucleoprotein 70 kDa-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 387
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 14 SYHPIQAGSIDGTDIHPHDNA-ICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFT 72
YHP ++ ++ D + A + LL Y+P DP GD T+ V RLS+
Sbjct: 55 EYHPTESW-LERRDRKKREKAEALKKLLEEGPKNYNPHADPNIRGDAFKTLIVARLSYEA 113
Query: 73 SEDTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
E L + ++G ++ +RL+RD RGYAFV +E E++MR A E C
Sbjct: 114 DEKDLEREFGRFGPIERIRLIRDTHAHEKPNKKIKPHRGYAFVVFEREKDMRAALEGC 171
>gi|212529894|ref|XP_002145104.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
gi|210074502|gb|EEA28589.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
Length = 382
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
L+ YDP D + GDP T+FV RLS+ E L + ++G ++ +R+V+D
Sbjct: 80 LITEGVEKYDPATDAQIRGDPFRTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDSEN 139
Query: 97 --VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 140 PNPKKPHRGYAFIVYEREKDMKAAYK 165
>gi|350645350|emb|CCD59973.1| hypothetical protein Smp_000440 [Schistosoma mansoni]
Length = 421
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 31/131 (23%)
Query: 13 GSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFT 72
G Y P+ GSIDGTD PHD AI RA L SS D + + A T+FVGRL + T
Sbjct: 200 GYYDPVTVGSIDGTDTTPHDRAIQRA-LTSSYKSKDHVFNRNA----KATIFVGRLPYHT 254
Query: 73 SEDTLRKAM----------------SKYGRVKN----------LRLVRDIVTGASRGYAF 106
S+ L+KA+ KY R ++ + +V +IVTG GYAF
Sbjct: 255 SKICLQKALHELLNKHLGNDLNKKSRKYCRSRSPFSCDEIWPKIHIVHNIVTGYPCGYAF 314
Query: 107 VEYETEREMRR 117
+ +E + R
Sbjct: 315 AYFSSESDAER 325
>gi|393904658|gb|EFO18286.2| hypothetical protein LOAG_10208 [Loa loa]
Length = 347
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
+ P +P A DP+ T+FV R+++ TSE LR+ ++G++ L LV D G RGYAF
Sbjct: 88 WSPAQNPSATVDPYKTLFVARINYETSESKLRREFEQFGKITRLALVHD-KNGKPRGYAF 146
Query: 107 VEYETEREM 115
+EY+ + M
Sbjct: 147 IEYQHKESM 155
>gi|327292644|ref|XP_003231020.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326466826|gb|EGD92279.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 405
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT- 98
L Y+P DP+ GDP T+FV RLS+ E L + ++G ++ +R+V+D
Sbjct: 81 LEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTKNP 140
Query: 99 ---GASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 NPKKPHRGYAFIVYEREKDMKAAYK 165
>gi|451851627|gb|EMD64925.1| hypothetical protein COCSADRAFT_25892 [Cochliobolus sativus ND90Pr]
Length = 387
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGA------ 100
Y P DPK GD T+FV RLS+ + D L + +YG ++ +R+V DI
Sbjct: 88 YKPSEDPKVQGDAFKTLFVSRLSYGITSDDLEREFGRYGPIERIRIVEDITQPEDAPPKK 147
Query: 101 -SRGYAFVEYETEREMRRAYE 120
RGYAF+ +E E++M+ AY+
Sbjct: 148 RKRGYAFIVFEREKDMKAAYK 168
>gi|326480343|gb|EGE04353.1| U1 small nuclear ribonucleoprotein [Trichophyton equinum CBS
127.97]
Length = 406
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--- 96
L Y+P DP+ GDP T+FV RLS+ E L + ++G ++ +R+V+D
Sbjct: 81 LEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTKNP 140
Query: 97 -VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 NPKKPHRGYAFIVYEREKDMKAAYK 165
>gi|119174818|ref|XP_001239737.1| hypothetical protein CIMG_09358 [Coccidioides immitis RS]
gi|303314545|ref|XP_003067281.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106949|gb|EER25136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037587|gb|EFW19524.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869929|gb|EAS28470.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 395
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT----GASR 102
YDP DP+ GDP T+FV RLS+ E L + ++G ++ +R+V D R
Sbjct: 88 YDPSSDPQVRGDPFKTLFVSRLSYDVKEADLEREFGRFGPIERIRIVTDPSNTNPKKKHR 147
Query: 103 GYAFVEYETEREMRRAYE 120
GYAF+ YE E +M+ AY+
Sbjct: 148 GYAFIVYERELDMKAAYK 165
>gi|401889211|gb|EJT53150.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 2479]
gi|406698908|gb|EKD02129.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 8904]
Length = 334
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P+ T+F+ RLS +E LR YG ++ +R+VRD G SR YAF+ +E ER+M+ A
Sbjct: 133 PYKTLFISRLSSKATEADLRHEFEMYGHIEKIRIVRDKRKGKSRNYAFIVFERERDMKAA 192
Query: 119 YE 120
Y+
Sbjct: 193 YK 194
>gi|389584381|dbj|GAB67113.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium cynomolgi
strain B]
Length = 494
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
+L YDP + DP T+F+GRLS+ +E L+K YG++K ++++ D
Sbjct: 76 MLKEMRKNYDPFKNEDLTNDPKKTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKIIYD-KN 134
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
+GYAF+E+E + AY +
Sbjct: 135 FKPKGYAFIEFEHTKSFNDAYNLA 158
>gi|85091763|ref|XP_959061.1| hypothetical protein NCU07548 [Neurospora crassa OR74A]
gi|28920458|gb|EAA29825.1| predicted protein [Neurospora crassa OR74A]
Length = 415
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 14 SYHPIQAGSIDGTDIHPHDNA-ICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFT 72
YHP ++ ++ D + LL Y+P DP GD T+ V RL +
Sbjct: 55 EYHPTESW-LEARDRKKREKKEALEKLLTEGPKNYNPNDDPNIRGDAFKTLIVARLDYRA 113
Query: 73 SEDTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
E L + S+YG ++ +R++RD RGYAFV +E E++MR A + C
Sbjct: 114 DEQDLEREFSRYGPIERIRIIRDTHADENPNKKKKPHRGYAFVVFEREKDMRAALDGC 171
>gi|336470127|gb|EGO58289.1| hypothetical protein NEUTE1DRAFT_64015 [Neurospora tetrasperma FGSC
2508]
gi|350290179|gb|EGZ71393.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 415
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 14 SYHPIQAGSIDGTDIHPHDNA-ICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFT 72
YHP ++ ++ D + LL Y+P DP GD T+ V RL +
Sbjct: 55 EYHPTESW-LEARDRKKREKKEALEKLLTEGPKNYNPNDDPNIRGDAFKTLIVARLDYRA 113
Query: 73 SEDTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
E L + S+YG ++ +R++RD RGYAFV +E E++MR A + C
Sbjct: 114 DEQDLEREFSRYGPIERIRIIRDTHADENPNKKKKPHRGYAFVVFEREKDMRAALDGC 171
>gi|315042121|ref|XP_003170437.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
gi|311345471|gb|EFR04674.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
Length = 405
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT- 98
L ++P DP+ GDP T+FV RLS+ E L + ++G ++ +R+V+D
Sbjct: 81 LEEGLSTFNPSEDPQIRGDPFRTLFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTQNP 140
Query: 99 ---GASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 NPKKPHRGYAFIVYEREKDMKAAYK 165
>gi|154283073|ref|XP_001542332.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410512|gb|EDN05900.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 371
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI------VTGA 100
Y+P DP+ GD T+FV RLS+ +E L + ++G ++ +R+V D
Sbjct: 88 YNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVDTHNPKNNAKKP 147
Query: 101 SRGYAFVEYETEREMRRAYEV 121
RGYAF+ YE E++M+ AY+V
Sbjct: 148 HRGYAFIVYEREQDMKAAYKV 168
>gi|71030936|ref|XP_765110.1| U1 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352066|gb|EAN32827.1| U1 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 227
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 40 LCSSAGLYDPLGDPK-AIG--------DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
L A YDP DP+ A G DP+ T+FV +++ +E L K YG+++ +
Sbjct: 77 LKKRASEYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVTEKQLSKEFQTYGKIRRV 136
Query: 91 RLVRDIVTGASRGYAFVEYETEREMRRAYE 120
R++ D + RGYAF+EYE ER+M AY+
Sbjct: 137 RMIHD-RSNKPRGYAFIEYENERDMVTAYK 165
>gi|269865317|ref|XP_002651881.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220063702|gb|EED42174.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 170
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
P CTVF+G + E+T+ K +S G+VK+ RL+ D TG S+GY F EYET
Sbjct: 7 PGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYET 59
>gi|84994904|ref|XP_952174.1| U1 small nuclear ribonucleoprotein 70 kDa [Theileria annulata
strain Ankara]
gi|65302335|emb|CAI74442.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Theileria
annulata]
Length = 227
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 10/86 (11%)
Query: 44 AGLYDPLGDPK-AIG--------DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVR 94
A YDP DP+ A G DP+ T+FV +++ +E L K YG+++ +R++
Sbjct: 81 ASQYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVTEKQLSKEFQTYGKIRRVRMIH 140
Query: 95 DIVTGASRGYAFVEYETEREMRRAYE 120
D + RGYAF+EYE+ER+M AY+
Sbjct: 141 D-RSNKPRGYAFIEYESERDMVTAYK 165
>gi|269862977|ref|XP_002651049.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065210|gb|EED43006.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 171
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
P CTVF+G + E+T+ K +S G+VK+ RL+ D TG S+GY F EYET
Sbjct: 7 PGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYET 59
>gi|398407635|ref|XP_003855283.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
gi|339475167|gb|EGP90259.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
Length = 603
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 17 PIQAGSIDGTDIHPHDNAICRALLCSS--AGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
PI ++ D D A +A + LY P D GD T+F+GRL + +
Sbjct: 58 PISESWLERRDRLTRDKAAKQAWVTGEGVKELYKPTEDENIRGDAFRTIFIGRLPYTCTT 117
Query: 75 DTLRKAMSKYGRVKNLRLVRD-----IVTGASRGYAFVEYETEREMRRAYE 120
L ++G ++ +R+V D G SRGYAFV +E+ER+M+ AY+
Sbjct: 118 KDLEHEFGRFGPIERVRIVTDRSEKPSKKGTSRGYAFVLFESERDMKAAYK 168
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +FV LS T+++ LR+A SK+GRV R+V D + G S+G+AFV Y T+ E +
Sbjct: 44 DPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEADK 103
Query: 118 AYE 120
E
Sbjct: 104 GKE 106
>gi|150865863|ref|XP_001385249.2| hypothetical protein PICST_32340 [Scheffersomyces stipitis CBS
6054]
gi|149387119|gb|ABN67220.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 314
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+ DP+ T+FV RL +E + K SKYG ++++R++RD VTG SRGY F+ +E E
Sbjct: 111 MKDPYRTIFVSRLDFSLTELDISKHFSKYGVIESVRIIRDSVTGKSRGYGFIVFERE 167
>gi|258567044|ref|XP_002584266.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905712|gb|EEP80113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 397
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT----GASR 102
YDP DP+ GDP T+FV RLS+ E L + ++G ++ +R+V D R
Sbjct: 88 YDPNSDPQVRGDPFRTLFVSRLSYDVKESDLEREFGRFGPIERIRIVTDPSNTNPKKKHR 147
Query: 103 GYAFVEYETEREMR 116
GYAF+ YE E++M+
Sbjct: 148 GYAFIVYEREQDMK 161
>gi|367005232|ref|XP_003687348.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
gi|357525652|emb|CCE64914.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
Length = 309
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 40 LCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD--- 95
+ S +DP DP I DP+ T+FVGRL + E +L+K KYG+++ +R++R+
Sbjct: 90 IESKLSAWDPNNDPNIINTDPYRTIFVGRLPYDIDEISLQKIFIKYGQIEKVRIIRNSHG 149
Query: 96 -------IVTGASRGYAFVEYETEREMRRAYEVCG 123
G SRGY F+ +E + A++ G
Sbjct: 150 KKENSNTPTVGKSRGYGFIVFEDTYSSKMAFKDIG 184
>gi|367017532|ref|XP_003683264.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
gi|359750928|emb|CCE94053.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
Length = 318
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
+DP DP DP+ T+FVGRL + SE L++ +++G ++ +R+VRD + S+GYA
Sbjct: 92 WDPQNDPNMKDTDPYRTIFVGRLPYDISEVELQRKFNEFGEIEKVRVVRDKINNQSKGYA 151
Query: 106 FV 107
F+
Sbjct: 152 FI 153
>gi|56759496|gb|AAW27888.1| SJCHGC02308 protein [Schistosoma japonicum]
Length = 203
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+FV RL++ T+E +++ + +GR+ N+ +V++++TG RGY FVE+E ER+M
Sbjct: 1 MFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDM 53
>gi|449301882|gb|EMC97891.1| hypothetical protein BAUCODRAFT_31906 [Baudoinia compniacensis UAMH
10762]
Length = 363
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 14/89 (15%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD---------- 95
LY+P D GD T+FVGRLS+ T L++ ++G + +R+V+D
Sbjct: 86 LYNPTKDENITGDAFSTLFVGRLSYDTDVKDLQREFGRFGPIARIRVVQDNGGSEKDSTR 145
Query: 96 ----IVTGASRGYAFVEYETEREMRRAYE 120
G SRGYAFV +E ER M+ AY+
Sbjct: 146 RQKKSRRGMSRGYAFVVFEQERHMKAAYK 174
>gi|121714030|ref|XP_001274626.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
gi|119402779|gb|EAW13200.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
Length = 377
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L S +YDP D +A GDP T+FV RLS+ E L + ++G ++ + V +
Sbjct: 81 LTESLQVYDPSNDSQARGDPFRTLFVARLSYDVKEADLEREFGRFGPIERVHTVTPKGSK 140
Query: 100 AS-RGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 KPHRGYAFIVYEREKDMKAAYK 162
>gi|325091104|gb|EGC44414.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 452
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--- 96
L Y+P DP+ GD T+FV RLS+ +E L + ++G ++ +R+V D
Sbjct: 81 LTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVDTHNP 140
Query: 97 ---VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 KKNAKKPHRGYAFIVYEREQDMKAAYK 167
>gi|82752588|ref|XP_727361.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii yoelii
17XNL]
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii
yoelii]
Length = 391
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP + DP T+F+GRLS+ +E L+K YG++K ++++ D RGYAF
Sbjct: 84 YDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKVIYD-QDKKPRGYAF 142
Query: 107 VEYETEREMRRAYEV 121
+E+E + + AY +
Sbjct: 143 IEFEHTKSVTDAYNL 157
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 30 PHDNAICRALLCSSAGL--YDP---LGDPKAIGD-PHCT---VFVGRLSHFTSEDTLRKA 80
P +++ RA CSSAG P GD + + P T +FV LS T+++ L+ A
Sbjct: 20 PASSSVLRATFCSSAGFGSSSPSSIFGDATEVANVPPLTTPNLFVSGLSRLTTDEKLQGA 79
Query: 81 MSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+ +GR+ ++V D V+G S+G+ FV Y T E RA +
Sbjct: 80 FAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQ 119
>gi|260942821|ref|XP_002615709.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
gi|238850999|gb|EEQ40463.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+ DP+ TVFV RL + +E L K +KYG ++++R++R+ TG SRGY F+ +E E
Sbjct: 113 LKDPYKTVFVARLYYSLTELDLSKHFTKYGTIESIRIIRNTETGQSRGYGFIVFERE 169
>gi|226295399|gb|EEH50819.1| hypothetical protein PADG_06898 [Paracoccidioides brasiliensis
Pb18]
Length = 417
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
LL Y+P DP+ GD T+FV RLS+ E L + ++G ++ +R+V D
Sbjct: 80 LLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLEREFGRFGPIERIRIVVDTHN 139
Query: 97 ----VTGASRGYAFVEYETEREMRRAYE 120
+ RGYAF+ YE E++M+ AY+
Sbjct: 140 PKKNPKKSHRGYAFIVYEREKDMKAAYK 167
>gi|401839251|gb|EJT42547.1| SNP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 300
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++P DP DP+ T+F+GRL + +E L+K ++G ++ +R+V+D +T SRGYA
Sbjct: 92 WNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEIEKIRIVKDKITQQSRGYA 151
Query: 106 FVEYETEREMRRAYEVCG 123
F+ ++ + A++ G
Sbjct: 152 FIVFKDPISSKMAFKEIG 169
>gi|365760179|gb|EHN01919.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++P DP DP+ T+F+GRL + +E L+K ++G ++ +R+V+D +T SRGYA
Sbjct: 92 WNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEIEKIRIVKDKITQQSRGYA 151
Query: 106 FVEYETEREMRRAYEVCG 123
F+ ++ + A++ G
Sbjct: 152 FIVFKDPISSKMAFKEIG 169
>gi|402078981|gb|EJT74246.1| hypothetical protein GGTG_08089 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 400
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 31 HDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
H + R L A Y PL DP GD T+ V RLS+ E + K ++G ++ +
Sbjct: 73 HTEEVARHLKEGPA-KYKPLEDPNIRGDAFKTLIVARLSYEADERDIEKEFGRFGTIERI 131
Query: 91 RLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
R+++D RGYAFV +E E++MR A + C
Sbjct: 132 RIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALDGC 171
>gi|363751975|ref|XP_003646204.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889839|gb|AET39387.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 331
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP T+FVGRL + E L+K K+G ++ +R+VRD +T +GYAFV ++ R+
Sbjct: 104 DPFRTIFVGRLPYEVDELELQKQFIKFGDIERVRIVRDKLTNEPKGYAFVLFKDTEGSRK 163
Query: 118 AYEVCG 123
AY G
Sbjct: 164 AYREIG 169
>gi|225561665|gb|EEH09945.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 423
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--- 96
L Y+P DP+ GD T+FV RLS+ +E L + ++G ++ +R+V D
Sbjct: 81 LTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVDTHNP 140
Query: 97 ---VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 KKNAKKPHRGYAFIVYEREQDMKAAYK 167
>gi|221057416|ref|XP_002261216.1| U1 small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|194247221|emb|CAQ40621.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 412
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
+L YDP + DP T+F+GRLS+ +E L+K YG++K ++++ D
Sbjct: 76 MLKEMRKNYDPFKNVDLTEDPKKTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKIIYD-KN 134
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
+GY F+E+E + AY +
Sbjct: 135 FKPKGYGFIEFEHTKSFNDAYNLA 158
>gi|240275269|gb|EER38783.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 421
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--- 96
L Y+P DP+ GD T+FV RLS+ +E L + ++G ++ +R+V D
Sbjct: 81 LTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVDTHNP 140
Query: 97 ---VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 KKNAKKPHRGYAFIVYEREQDMKAAYK 167
>gi|255724646|ref|XP_002547252.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135143|gb|EER34697.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 343
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+ DP CTVF+ RL + +E + KA +KYG ++++R++RD G SRGY F+ YE
Sbjct: 117 MKDPLCTVFIARLDYNLTELDISKAFAKYGMIESIRIIRD-QNGKSRGYGFIVYE 170
>gi|193683845|ref|XP_001950620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Acyrthosiphon pisum]
Length = 533
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 51 GDPKAIGDPH----CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
G P DP C VF G+L + ED L K G++ +LRL+ D ++G +RGYAF
Sbjct: 145 GPPPDWTDPKPTAGCEVFCGKLPNTVFEDELIPLFEKCGKIYDLRLMMDPLSGTNRGYAF 204
Query: 107 VEYETEREMRRA 118
V Y T+ E RA
Sbjct: 205 VTYTTKEEAERA 216
>gi|403218287|emb|CCK72778.1| hypothetical protein KNAG_0L01580 [Kazachstania naganishii CBS
8797]
Length = 305
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LLC + P DP G DP+ T+FVGRL + T+E L++ KYG V +R+VRD
Sbjct: 82 LLCEE---WKPAEDPNIAGTDPYKTIFVGRLPYDTTELDLQEIFGKYGAVDKVRVVRD-K 137
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
+ SRGY FV + + +R G
Sbjct: 138 SNKSRGYGFVLFADPQASKRTMRETG 163
>gi|295670647|ref|XP_002795871.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284956|gb|EEH40522.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 409
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
LL Y+P DP+ GD T+FV RLS+ E L + ++G ++ +R+V D
Sbjct: 80 LLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLEREFGRFGPIERIRIVVDTHN 139
Query: 97 ----VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 140 PKKNPKKPHRGYAFIVYEREKDMKAAYK 167
>gi|389632567|ref|XP_003713936.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|351646269|gb|EHA54129.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|440473215|gb|ELQ42030.1| hypothetical protein OOU_Y34scaffold00240g37 [Magnaporthe oryzae
Y34]
gi|440480244|gb|ELQ60919.1| hypothetical protein OOW_P131scaffold01214g36 [Magnaporthe oryzae
P131]
Length = 405
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 31 HDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
H+ I L A Y P DP GD T+ V RLS+ +E L + ++G ++ +
Sbjct: 73 HEKEIALKLKEGPA-KYKPQDDPNIRGDAFKTLIVARLSYDANEQDLEREFGRFGTIERI 131
Query: 91 RLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
R+++D RGYAFV +E E++MR A E C
Sbjct: 132 RIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALEGC 171
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 23 IDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGD----PHCTVFVGRLSHFTSEDTLR 78
+DG ++ + A G +DP + GD P T+FVG LS +ED +
Sbjct: 64 MDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFGDKPSEPSSTLFVGNLSWSATEDAVW 123
Query: 79 KAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
++YG VKN+RL + TG +G+ +VE+E ++AYE
Sbjct: 124 GLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIEGAKKAYEAL 166
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+ +VFVG L D L++ +K+G +++ ++ D TG SRG+ +V + T + ++A
Sbjct: 2 YTSVFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAK 61
Query: 120 E 120
E
Sbjct: 62 E 62
>gi|367027924|ref|XP_003663246.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
gi|347010515|gb|AEO58001.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
Length = 313
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
YHP ++ LL Y+P DP GD T+ V RL +
Sbjct: 55 EYHPTESWLERRDRKKREKQEQVERLLTEGPKNYNPHADPNIRGDAFKTLIVARLDYNAD 114
Query: 74 EDTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
E L + ++G ++ +R++RD RGY FV +E E++MR A E C
Sbjct: 115 EKDLEREFGRFGPIERIRIIRDTHAHEKGNKKQKPHRGYGFVVFEREKDMRAALEGC 171
>gi|367049672|ref|XP_003655215.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
gi|347002479|gb|AEO68879.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
Length = 391
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 14 SYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
YHP ++ A LL Y+P DP GD T+ V RL +
Sbjct: 55 EYHPTESWLERRDRKKREKQAEVEKLLTEGPKKYNPHEDPNIRGDAFKTLIVARLDYNAD 114
Query: 74 EDTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
E L + ++G ++ +R++RD RGY FV +E E++MR A + C
Sbjct: 115 EKDLEREFGRFGPIERIRIIRDTHAHEKGNKKQKPHRGYGFVVFEREKDMRAALDGC 171
>gi|399950033|gb|AFP65689.1| polyadenylate-binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 490
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
I +P C+++VG LS + E +L K SK G+V ++++ RD TG SRGY++V + ++
Sbjct: 31 IKNP-CSLYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGYSYVNFLNPKDA 89
Query: 116 RRAYEV 121
++A+++
Sbjct: 90 QKAFKL 95
>gi|322707331|gb|EFY98910.1| U1 small nuclear ribonucleoprotein [Metarhizium anisopliae ARSEF
23]
Length = 392
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 15 YHPIQAGSIDGTDIHPHDNA-ICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTS 73
Y+P ++ ++ D H+ LL Y P DP GD T+ V RLS+
Sbjct: 56 YNPTES-WLEAKDRKKHEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDAD 114
Query: 74 EDTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
E L + ++G ++ +R++ D A RGYAFV +E E++MR A + C
Sbjct: 115 ERDLEREFGRFGPIERIRIITDTHAHEKPNKKKKAHRGYAFVVFEREKDMRAALDSC 171
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P+ +FVG +S+ T E +L A SKYG+V + R++ D +G S+G+ FV Y T E A
Sbjct: 42 PNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSA 101
Query: 119 YEV 121
+
Sbjct: 102 IQA 104
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T SRGYAFV
Sbjct: 84 PGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVS 143
Query: 109 YETEREMRRAYEV 121
+ + E A ++
Sbjct: 144 FVKKAEAENAIQM 156
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T++VG L +ED L + G VK+ +++R+ +S YAF+EY + + A
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIRE---ASSDPYAFIEYANHQSAQTA 62
>gi|254570158|ref|XP_002492189.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031986|emb|CAY69909.1| hypothetical protein PAS_chr2-2_0449 [Komagataella pastoris GS115]
gi|328351324|emb|CCA37723.1| U1 small nuclear ribonucleoprotein 70 kDa [Komagataella pastoris
CBS 7435]
Length = 295
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L ++P D IGD T+FV RL + ++E L+ ++ +G + +R+VRD+ T
Sbjct: 101 LQRDLAAWNPEKDLNMIGDASRTIFVARLDYNSTEVDLQNSLGVFGEIDRIRVVRDVNTD 160
Query: 100 ASRGYAFVEYETEREMRRAY 119
S+GY FV ++ + R AY
Sbjct: 161 KSKGYGFVVFKQPDDARTAY 180
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T SRGYAFV
Sbjct: 84 PGNQPKTDTSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVS 143
Query: 109 YETEREMRRAYEV 121
+ + E A ++
Sbjct: 144 FVKKAEAENAIQM 156
>gi|453087961|gb|EMF16002.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 348
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD---IVTGASR 102
+Y P D GD T+FVGRL + + L K ++G ++ +R+V D G R
Sbjct: 89 MYKPGEDENIRGDAFKTLFVGRLPYDCTTKDLEKEFGRFGPIERVRIVTDRSEKAKGKPR 148
Query: 103 GYAFVEYETEREMRRAYEVC 122
GYAF+ +E E++M+ AY+ C
Sbjct: 149 GYAFILFEREKDMKAAYKEC 168
>gi|261189727|ref|XP_002621274.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591510|gb|EEQ74091.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239612961|gb|EEQ89948.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352134|gb|EGE80991.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 422
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--- 96
L Y+P DP+ GD T+FV RLS+ +E L + ++G ++ +R+V D
Sbjct: 81 LTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVDTHNP 140
Query: 97 ---VTGASRGYAFVEYETEREMRRAYE 120
RGYAF+ YE E++M+ AY+
Sbjct: 141 KKNPKKPHRGYAFIVYEREQDMKAAYK 167
>gi|410084527|ref|XP_003959840.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
gi|372466433|emb|CCF60705.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
Length = 285
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 40 LCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
L + +DP+ D + DP+ T+F+GRL + +E L+K K+G ++ +R+V+DI T
Sbjct: 84 LHNELQKWDPMNDVNSQNTDPYKTIFIGRLPYNVTEIELQKIFIKFGEIEKIRIVKDIKT 143
Query: 99 GASRGYAFV 107
+GY F+
Sbjct: 144 DKPKGYGFI 152
>gi|156101519|ref|XP_001616453.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium vivax Sal-1]
gi|148805327|gb|EDL46726.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Plasmodium
vivax]
Length = 452
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP + DP T+F+GRLS+ +E L+K YG++K ++++ D +GY F
Sbjct: 84 YDPFKNADLTNDPKKTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKIIYD-KNFKPKGYGF 142
Query: 107 VEYETEREMRRAYEV 121
+E+E + AY +
Sbjct: 143 IEFEHTKSFNDAYNL 157
>gi|444509674|gb|ELV09400.1| Nucleolin [Tupaia chinensis]
Length = 261
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+SRG+
Sbjct: 175 LKGPSGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSRGFG 231
Query: 106 FVEYETEREMRRAYEVCG 123
FV++ +E + + A E G
Sbjct: 232 FVDFNSEEDAKAAKEAMG 249
>gi|50294956|ref|XP_449889.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529203|emb|CAG62869.1| unnamed protein product [Candida glabrata]
Length = 299
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
+DPL D DP+ TVFVGRL + T E L+K +KYG + +R+VRD SRGYA
Sbjct: 100 WDPLSDNHMRDTDPYKTVFVGRLPYDTDEVQLQKVFAKYGEIVRVRVVRD-KQNKSRGYA 158
Query: 106 FVEYE 110
FV ++
Sbjct: 159 FVLFK 163
>gi|361128631|gb|EHL00561.1| putative U1 small nuclear ribonucleoprotein 70 kDa like protein
[Glarea lozoyensis 74030]
Length = 421
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--------VT 98
Y P DP GD T+ V RLS+ +E L +YG ++ +R+V D
Sbjct: 88 YKPSEDPNIRGDAFKTLIVARLSYEATEQDLESEFGRYGAIERIRIVVDTHQDEKPNKKK 147
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A E C
Sbjct: 148 KKHRGYAFVVFEREKDMRAALENC 171
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P +F+G +S+ T E +LR+A SKYG V + R++ D TG SRG+ F+ Y + E A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 119 YEVC 122
+
Sbjct: 100 IQAL 103
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
C +F+G L+ T+EDTLR SKYGRV +L++++D TG SRG+ F+ +++
Sbjct: 159 CKMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDS 209
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS DTLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 144 FVKKAEAENAIQ 155
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
TV+ G + ++D + K S++G ++++R+ +D +GYAF+++ ++ A E
Sbjct: 206 TVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKD------KGYAFIKFVSKESATHAIE 258
>gi|331249519|ref|XP_003337376.1| hypothetical protein PGTG_18970 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 545
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
YDP DP A GDP+ T+F+ RLS+ +E L++ YG + L +V++ +TG S G A
Sbjct: 213 YDPKQDPNATGDPYRTLFISRLSYEVTESDLKREFDMYGPIDKLVIVKNKLTGKSPGMA 271
>gi|68064271|ref|XP_674124.1| u1 small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56492466|emb|CAH97184.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 319
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 34 AICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLV 93
A +L YDP + D T+F+GRLS+ +E L+K YG++K ++++
Sbjct: 20 AYNELILKEKKKEYDPFKNNDISSDLKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKVI 79
Query: 94 RDIVTGASRGYAFVEYETEREMRRAYEVC 122
D RGYAF+E+E + + AY +
Sbjct: 80 YD-QDKKPRGYAFIEFEHTKSVTDAYNLA 107
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P +F+G +S+ T E +LR+A SKYG V + R++ D TG SRG+ F+ Y + E A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 119 YEVC 122
+
Sbjct: 100 IQAL 103
>gi|323348131|gb|EGA82385.1| Snp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 300
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|349803745|gb|AEQ17345.1| putative peptidylprolyl isomerase (cyclophilin), partial [Pipa
carvalhoi]
Length = 185
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 6 INSVFYAGSYHPIQAGSIDGTDIHPH-----DNAICRALLCSSAGLYDPLGD-PKA-IGD 58
IN F + PI A D D + I ++A L + +GD P A I
Sbjct: 44 INETFVDKEFVPIGADE-DICDDQEKTAEEVEEMIAEKDAKTNAVLLEMVGDIPDADIKP 102
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P +FV +L+ T+++ L S++G +K+ ++RD TG S YAF+E+E + + +A
Sbjct: 103 PENVLFVCKLNPVTTDEDLEIIFSRFGTIKSCEIIRDWKTGESLCYAFIEFEKDEDCEKA 162
Query: 119 Y 119
Y
Sbjct: 163 Y 163
>gi|190406278|gb|EDV09545.1| hypothetical protein SCRG_05237 [Saccharomyces cerevisiae RM11-1a]
gi|207344323|gb|EDZ71507.1| YIL061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147197|emb|CAY80450.1| Snp1p [Saccharomyces cerevisiae EC1118]
gi|323333165|gb|EGA74565.1| Snp1p [Saccharomyces cerevisiae AWRI796]
gi|323337193|gb|EGA78447.1| Snp1p [Saccharomyces cerevisiae Vin13]
gi|392298660|gb|EIW09756.1| Snp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 300
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|256269775|gb|EEU05041.1| Snp1p [Saccharomyces cerevisiae JAY291]
Length = 300
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|50305197|ref|XP_452557.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641690|emb|CAH01408.1| KLLA0C08019p [Kluyveromyces lactis]
Length = 301
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L + P D DP+ T+FVGRL + E L+K+ KYG +++ R+VRD G
Sbjct: 94 LMKKIQEWHPESDANISSDPYRTLFVGRLHYAVDEVELQKSFVKYGDIESCRIVRD-QDG 152
Query: 100 ASRGYAFVEYETEREMRRAYEVCG 123
SRGY FV++ + + ++ + G
Sbjct: 153 KSRGYGFVQFTSYEDSKQCFRELG 176
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+C VFVG LS+ +ED LRK S G+V+ + ++ D TG SRG+AFV + +E E A
Sbjct: 2 ANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDA 61
Query: 119 YE 120
E
Sbjct: 62 IE 63
>gi|365765125|gb|EHN06639.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|45187810|ref|NP_984033.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|44982571|gb|AAS51857.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|374107246|gb|AEY96154.1| FADL063Wp [Ashbya gossypii FDAG1]
Length = 320
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP T+FVGRL + E L+K K+G ++ +R+VRD +T RGYAFV + ++
Sbjct: 104 DPFRTIFVGRLHYDVDELELQKHFIKFGEIERVRIVRDKITNKPRGYAFVLFRDPECSKK 163
Query: 118 AYEVCG 123
AY G
Sbjct: 164 AYREIG 169
>gi|58737192|dbj|BAD89467.1| putative nuclear protein [Oryza sativa Japonica Group]
Length = 674
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G P +FV S+ T+E L K SKYGRV + R+VRD +G SRG+ F+ E + +
Sbjct: 588 LGKPGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDA 647
Query: 116 RRAYEVC 122
A C
Sbjct: 648 DAAIRAC 654
>gi|6322128|ref|NP_012203.1| Snp1p [Saccharomyces cerevisiae S288c]
gi|266985|sp|Q00916.1|RU17_YEAST RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein SNP1; Short=U1 snRNP protein SNP1
gi|4504|emb|CAA42602.1| U1 snRNP 70K protein homologue [Saccharomyces cerevisiae]
gi|557808|emb|CAA86162.1| snp1 [Saccharomyces cerevisiae]
gi|45270060|gb|AAS56411.1| YIL061C [Saccharomyces cerevisiae]
gi|151943102|gb|EDN61437.1| U1 70K [Saccharomyces cerevisiae YJM789]
gi|285812590|tpg|DAA08489.1| TPA: Snp1p [Saccharomyces cerevisiae S288c]
gi|349578892|dbj|GAA24056.1| K7_Snp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 300
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|323304496|gb|EGA58262.1| Snp1p [Saccharomyces cerevisiae FostersB]
Length = 300
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|323354596|gb|EGA86432.1| Snp1p [Saccharomyces cerevisiae VL3]
Length = 300
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 39 LLCSSAGLYDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
LL ++P DP DP+ T+F+GRL + E L+K K+G ++ +R+V+D +
Sbjct: 84 LLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143
Query: 98 TGASRGYAFVEYETEREMRRAYEVCG 123
T S+GYAF+ ++ + A++ G
Sbjct: 144 TQKSKGYAFIVFKDPISSKMAFKEIG 169
>gi|297719959|ref|NP_001172341.1| Os01g0367300 [Oryza sativa Japonica Group]
gi|57900228|dbj|BAD88333.1| peptidylprolyl cis-trans isomerase-like protein [Oryza sativa
Japonica Group]
gi|255673231|dbj|BAH91071.1| Os01g0367300 [Oryza sativa Japonica Group]
Length = 698
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G P +FV S+ T+E L K SKYGRV + R+VRD +G SRG+ F+ E + +
Sbjct: 612 LGKPGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDA 671
Query: 116 RRAYEVC 122
A C
Sbjct: 672 DAAIRAC 678
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
C +F+G L+ T+ED LR SKYG+V+ L++++D TG SRG+ F+ +E+
Sbjct: 122 CKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFES 172
>gi|408795922|gb|AFU91976.1| cyclophilin-RNA interacting protein [Cryptosporidium parvum]
Length = 302
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 33 NAICRALLCSSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
N+I S A + LGD P A + P +FV +L+ T +D L S++G VK+
Sbjct: 202 NSISEREAKSRAITLEILGDIPDADMKPPENVLFVCKLNPVTQDDDLELIFSRFGEVKSC 261
Query: 91 RLVRDIVTGASRGYAFVEYETEREMRRAY 119
++RD TG S YAF+E+ET+++ A+
Sbjct: 262 NIIRDYKTGDSLQYAFIEFETKQQCEMAF 290
>gi|156085230|ref|XP_001610098.1| u1 snRNP [Babesia bovis T2Bo]
gi|154797350|gb|EDO06530.1| u1 snRNP, putative [Babesia bovis]
Length = 247
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 47 YDPL-----GDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
YDP +P DP+ T+FV + + +E L K YGRV+ +R++ D
Sbjct: 88 YDPALARGATNPWLTHDPYKTLFVSNIPYEVTEKQLWKEFDVYGRVRRIRMIND-RKNIP 146
Query: 102 RGYAFVEYETEREMRRAYE 120
RGYAF+EY ER+M AY+
Sbjct: 147 RGYAFIEYNDERDMVNAYK 165
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+GD FVG L+ T+++TL +A S+YG V +++ D TG SRG+ FV ++ E+ M
Sbjct: 1 MGDVEYRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAM 60
Query: 116 RRAYE 120
R A E
Sbjct: 61 RDAIE 65
>gi|156836695|ref|XP_001642396.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112914|gb|EDO14538.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT------- 98
++P DP DP+ T+FVGRL + +E L+K +K+G+++ +R+VRD T
Sbjct: 93 WNPNNDPNVKDTDPYRTIFVGRLPYDVNEMDLQKLFNKFGQIEKVRIVRDKKTITKTNPL 152
Query: 99 GASRGYAFVEY 109
G SRGYAF+ +
Sbjct: 153 GNSRGYAFIVF 163
>gi|126654515|ref|XP_001388428.1| cyclophilin-RNA interacting protein [Cryptosporidium parvum Iowa
II]
gi|126117368|gb|EAZ51468.1| cyclophilin-RNA interacting protein, putative [Cryptosporidium
parvum Iowa II]
Length = 302
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 33 NAICRALLCSSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
N+I S A + LGD P A + P +FV +L+ T +D L S++G VK+
Sbjct: 202 NSISEREAKSRAITLEILGDIPDADMKPPENVLFVCKLNPVTQDDDLELIFSRFGEVKSC 261
Query: 91 RLVRDIVTGASRGYAFVEYETEREMRRAY 119
++RD TG S YAF+E+ET+++ A+
Sbjct: 262 NIIRDYKTGDSLQYAFIEFETKQQCEMAF 290
>gi|67602623|ref|XP_666493.1| cyclophilin-RNA interacting protein [Cryptosporidium hominis TU502]
gi|54657501|gb|EAL36265.1| cyclophilin-RNA interacting protein [Cryptosporidium hominis]
Length = 302
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 33 NAICRALLCSSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
N+I S A + LGD P A + P +FV +L+ T +D L S++G VK+
Sbjct: 202 NSISEREAKSRAITLEILGDIPDADMKPPENVLFVCKLNPVTQDDDLELIFSRFGEVKSC 261
Query: 91 RLVRDIVTGASRGYAFVEYETEREMRRAY 119
++RD TG S YAF+E+ET+++ A+
Sbjct: 262 NIIRDYKTGDSLQYAFIEFETKQQCEMAF 290
>gi|302772180|ref|XP_002969508.1| hypothetical protein SELMODRAFT_440750 [Selaginella moellendorffii]
gi|300162984|gb|EFJ29596.1| hypothetical protein SELMODRAFT_440750 [Selaginella moellendorffii]
Length = 240
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A S+ P++AG+ + ++ R L +D G ++ V++GR+ H
Sbjct: 9 APSFLPLEAGAAGSSKKRKQRSSSSRILTE-----FDEQGKRRS-----SVVYIGRIPHG 58
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
ED +R S++G V LRL R+ TG S+ YAFVE+ET
Sbjct: 59 FYEDQMRGYFSQFGAVTRLRLSRNKKTGKSKHYAFVEFET 98
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG LS T++++L+ A SKYG+V ++V D +G SRG+AFV ++ ++ M A E
Sbjct: 46 FVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIE 102
>gi|413945429|gb|AFW78078.1| hypothetical protein ZEAMMB73_201613, partial [Zea mays]
gi|413945430|gb|AFW78079.1| hypothetical protein ZEAMMB73_201613, partial [Zea mays]
Length = 147
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 50 LGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
L DP A+ +P CTVF+G L E L + + + GRV +L + RD T +GYAF E
Sbjct: 50 LPDPAAMARNPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAE 109
Query: 109 YETE 112
YETE
Sbjct: 110 YETE 113
>gi|407923799|gb|EKG16862.1| hypothetical protein MPH_05843 [Macrophomina phaseolina MS6]
Length = 343
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT-------G 99
+ P DP GDP T+FV RLS+ T L + ++G ++ +R+V D
Sbjct: 52 FKPAEDPNVRGDPFRTLFVARLSYDTEVKDLEREFGRFGPIERIRVVHDTTQPEDAPAKK 111
Query: 100 ASRGYAFVEYETEREMR 116
+RGYAFV +E E++M+
Sbjct: 112 KNRGYAFVVFEREKDMK 128
>gi|302810175|ref|XP_002986779.1| hypothetical protein SELMODRAFT_425694 [Selaginella moellendorffii]
gi|300145433|gb|EFJ12109.1| hypothetical protein SELMODRAFT_425694 [Selaginella moellendorffii]
Length = 199
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 12 AGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHF 71
A S+ P++AG+ + ++ R L +D G ++ V++GR+ H
Sbjct: 9 APSFLPLEAGAAGSSKKRKQRSSSSRILTE-----FDEQGKRRS-----SVVYIGRIPHG 58
Query: 72 TSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
ED +R S++G V LRL R+ TG S+ YAFVE+ET
Sbjct: 59 FYEDQMRGYFSQFGAVTRLRLSRNKKTGKSKHYAFVEFET 98
>gi|115464015|ref|NP_001055607.1| Os05g0427300 [Oryza sativa Japonica Group]
gi|113579158|dbj|BAF17521.1| Os05g0427300 [Oryza sativa Japonica Group]
gi|215692737|dbj|BAG88157.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737792|dbj|BAG96922.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765638|dbj|BAG87335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767778|dbj|BAH00007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631662|gb|EEE63794.1| hypothetical protein OsJ_18618 [Oryza sativa Japonica Group]
Length = 187
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T S+GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETE 58
>gi|357122647|ref|XP_003563026.1| PREDICTED: uncharacterized protein LOC100823440 [Brachypodium
distachyon]
Length = 644
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G P +FV S+ T+E L K +KYGRV ++R+VRD TG SRG+ F+ E + +
Sbjct: 558 LGKPGRNLFVAGFSYATTERDLEKKFAKYGRVTSVRVVRDKRTGDSRGFGFLCLEKDEDA 617
Query: 116 RRAYEVC 122
A + C
Sbjct: 618 DAAIQAC 624
>gi|218196836|gb|EEC79263.1| hypothetical protein OsI_20043 [Oryza sativa Indica Group]
Length = 187
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T S+GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETE 58
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
V+VG LS T++DTLR+A S+YG+V + ++RD TG SRG+ FV + +E+E A
Sbjct: 5 VYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAA 60
>gi|71027417|ref|XP_763352.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350305|gb|EAN31069.1| hypothetical protein, conserved [Theileria parva]
Length = 248
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + LGD P A I P +FV +L+ T E L+ S++G VK+ +++D VTG
Sbjct: 32 SRAVVLEILGDIPDADITPPKNVLFVCKLNPVTEEKDLKIIFSRFGNVKSCDIIKDYVTG 91
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+ETE AY
Sbjct: 92 DSLQYAFIEFETEESCNEAY 111
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
Query: 109 YETEREMRRAYEV 121
+ + E A +
Sbjct: 144 FVKKAEAENAIQA 156
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+CTV+ G + +ED ++K S++G ++++R+ +D +GYAF+++ T+ A
Sbjct: 204 NCTVYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKD------KGYAFIKFATKESATHAI 257
Query: 120 EV 121
E
Sbjct: 258 ET 259
>gi|429327719|gb|AFZ79479.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Babesia equi]
Length = 221
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 47 YDPLGDPK-AIG--------DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
YDP DP+ A G DP+ T+FV +++ +E L K YGR++ +R++ D
Sbjct: 85 YDPNYDPRLARGSSTPFLTHDPYKTLFVSNIAYEVTERQLWKEFEVYGRIRRIRMIYD-Q 143
Query: 98 TGASRGYAFVEYETEREMRRAYE 120
RGYAF+E+++ER+M AY+
Sbjct: 144 DNKPRGYAFIEFDSERDMVAAYK 166
>gi|432920030|ref|XP_004079803.1| PREDICTED: la-related protein 7-like [Oryzias latipes]
Length = 520
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
PLGDP I CTV+V L S + + SK G V + + R TG S+G+AFVE
Sbjct: 116 PLGDP-PINSDSCTVYVELLPKDVSHSWIERVFSKCGNVTYVSIPRYRTTGDSKGFAFVE 174
Query: 109 YETEREMRRAYEV 121
+E E + ++A E+
Sbjct: 175 FENEEQAQKAIEM 187
>gi|215704644|dbj|BAG94272.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 161
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T S+GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETE 58
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +FV LS T+ D LR+A +K+G V++ R++ D VTG S+G+ FV Y T + +
Sbjct: 45 DPSPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAK 104
Query: 118 AYE 120
E
Sbjct: 105 GIE 107
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
Query: 109 YETEREMRRAYEV 121
+ + E A ++
Sbjct: 144 FVKKAEAENAIQM 156
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T++VG L +ED L + G VK+ +++R+ +S YAF+EY + + + A
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIRE---ASSDPYAFIEYASHQSAQTA 62
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
CTV+VG LS T+ED L+ KYG + ++R+ R+ S+G+ FVE+E E + ++A
Sbjct: 25 KCTVYVGSLSWSTNEDGLKAVFEKYGNITSVRIPRND-RDQSKGFGFVEFENEEDAKKAC 83
Query: 120 EVCG 123
E+ G
Sbjct: 84 EMDG 87
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+EDTLR SKYG+V +L++++D TG SRG+ F+ ++
Sbjct: 157 CKMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFD 206
>gi|85000601|ref|XP_955019.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303165|emb|CAI75543.1| hypothetical protein, conserved [Theileria annulata]
Length = 164
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + LGD P A I P +FV +L+ T E L+ S++G V++ +++D VTG
Sbjct: 32 SRAVVLEILGDIPDADITPPKNVLFVCKLNPVTEEKDLKIIFSRFGNVRSCDIIKDYVTG 91
Query: 100 ASRGYAFVEYETEREMRRAY 119
S Y F+E+ETE AY
Sbjct: 92 DSLQYGFIEFETEESCNEAY 111
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG LS T++++L+ A SKYG+V ++V D +G SRG+AFV ++ ++ M A E
Sbjct: 10 FVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIE 66
>gi|403179018|ref|XP_003888594.1| hypothetical protein PGTG_22653 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164575|gb|EHS62725.1| hypothetical protein PGTG_22653 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 174
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRG 103
YDP DP A GDP+ T+F+ RLS+ +E L++ YG + L +V++ +TG S G
Sbjct: 110 YDPKQDPNATGDPYRTLFISRLSYEVTESDLKREFDMYGPIDKLVIVKNKLTGKSPG 166
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+C VFVG LS+ +ED LRK S G+V+ + ++ D TG SRG+AFV + +E E A
Sbjct: 2 ANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDA 61
Query: 119 YE 120
E
Sbjct: 62 IE 63
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+FVG LS SE+ LR S+YG VK ++L D TG RG+AFVE E E + ++A +
Sbjct: 1 MTIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAID 60
>gi|342885914|gb|EGU85866.1| hypothetical protein FOXB_03714 [Fusarium oxysporum Fo5176]
Length = 391
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
LL + + P DP GD T+ V RLS+ E L K +YG ++ +R+V D
Sbjct: 80 LLREAPDHHKPNEDPNVRGDAFKTLMVARLSYDADERDLEKEFGRYGPIERIRIVVDTHA 139
Query: 97 ------VTGASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 140 HEKPNKKKKPHRGYAFVVFEREKDMRAALDAC 171
>gi|401625267|gb|EJS43283.1| snp1p [Saccharomyces arboricola H-6]
Length = 300
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++P DP DP+ T+F+GRL + +E L+K ++G ++ +R+V+D T S+GYA
Sbjct: 92 WNPNVDPHIKDTDPYRTIFIGRLPYNINEIELQKHFVRFGEIQKIRIVKDRTTQQSKGYA 151
Query: 106 FVEYETEREMRRAYEVCG 123
F+ ++ + A++ G
Sbjct: 152 FIVFKDPISSKMAFKEIG 169
>gi|46391132|gb|AAS90659.1| putative galactosyltransferase [Oryza sativa Japonica Group]
Length = 534
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T S+GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETE 58
>gi|294658365|ref|XP_460701.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
gi|202953076|emb|CAG89041.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
Length = 334
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ DP TVF+ RL + +E + K SKYG ++++ +VRD +G SRGY FV +E + +
Sbjct: 111 MKDPFKTVFISRLDYLLTELDISKNFSKYGVIESITIVRDKKSGKSRGYGFVVFERDEDA 170
Query: 116 R 116
+
Sbjct: 171 K 171
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
PK H +FVG LS +TLR+A + +G + N R+VRD T SRGYAFV + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 113 REMRRA 118
E A
Sbjct: 148 AEAENA 153
>gi|428671999|gb|EKX72914.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 209
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + LGD P A I P +FV +L+ T E L+ S++G VK +++D VTG
Sbjct: 32 SRAVVLEILGDIPDADIAPPKNVLFVCKLNPVTEEGDLKIIFSRFGNVKKCDIIKDYVTG 91
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+ETE AY
Sbjct: 92 DSLQYAFIEFETEESCNEAY 111
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
V+V LS FT++ L K + YG+VK++R+ + G +RGYAFVEYE ++ RRA +
Sbjct: 806 VYVAGLSKFTTKADLEKLFATYGKVKDVRMATE-QDGHARGYAFVEYEEPQDARRALD 862
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
V+VG LS T++DTLRKA S YG+V + ++RD TG SRG+ FV + +E E
Sbjct: 3 AKVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETE 56
>gi|222618441|gb|EEE54573.1| hypothetical protein OsJ_01776 [Oryza sativa Japonica Group]
Length = 978
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P +G P +FV S+ T+E L K SKYGRV + R+VRD +G SRG+ F+
Sbjct: 318 PANRKTGLGKPGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLS 377
Query: 109 YETEREMRRAYEVC 122
E + + A C
Sbjct: 378 LEKDEDADAAIRAC 391
>gi|406866559|gb|EKD19599.1| U1 small nuclear ribonucleoprotein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 408
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y P ++ I A AL + Y P DP GD T+ V RLS+ ++
Sbjct: 56 YVPTESWLQKKDRIKAEKRAAQEALTKNGPATYKPDEDPNIRGDAFKTLIVARLSYDATD 115
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGAS--------RGYAFVEYETEREMRRAYEVC 122
+ + S++G ++ +R+V D RGYAFV +E E++MR A E C
Sbjct: 116 QDIEREFSRFGPIERIRIVVDTHQDEKPNKKKKNHRGYAFVVFEREKDMRAALENC 171
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P +F+G +S+ T E +LR+A SKYG V + R++ D TG SRG+ F+ Y + E A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 119 YEVC 122
+
Sbjct: 100 IQAL 103
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 54 KAIGD----PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
KA GD P T+FVG LS SED L +A + YG VK +R+ D TG +G+A+V++
Sbjct: 389 KAFGDQKSEPSSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDF 448
Query: 110 ETEREMRRAYE 120
++A++
Sbjct: 449 TDIESAKKAHD 459
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEV 121
T+FVGRLS D L+ + G V + R+ D TG SRG+ +VE+ + + A ++
Sbjct: 301 TIFVGRLSWNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPDAVEAALKL 360
Query: 122 CG 123
G
Sbjct: 361 TG 362
>gi|156600447|gb|ABU86408.1| cleavage stimulation factor, partial [Clonorchis sinensis]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+VF+G L E+ +R AMSK+G + N+RL+RD TGA +G+ FV+Y
Sbjct: 68 SVFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQY 115
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 6 INSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFV 65
+NSV AG + +DG I P A+ + G P P + VF+
Sbjct: 62 VNSVLNAGPHL------LDGKQIDPKP-AVQK-------GQPAPQASPSNVNT--NKVFI 105
Query: 66 GRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVCG 123
G ++ TSED ++K S +G+VKN++L+ D T RG+ FV +E + +++ CG
Sbjct: 106 GGVAQNTSEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVKK---TCG 160
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+FVG L T D+++K +KYG V + + +D VT SRG+ FV +E
Sbjct: 10 IFVGGLHPDTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFE 57
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 48 DPLGDPKAIGDPHCT------VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+PL P + G T +F+ LS +TSE TLR A +G++ ++++ D ++ S
Sbjct: 287 NPLDLPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRS 346
Query: 102 RGYAFVEYETE 112
+GYAFVEY TE
Sbjct: 347 KGYAFVEYTTE 357
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FV RLS +T++ +LR+ S +G++K RL+RD T +G+ F+ +E+E + R+A +
Sbjct: 7 AQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALK 66
>gi|302410869|ref|XP_003003268.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
gi|261358292|gb|EEY20720.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
Length = 413
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---------V 97
Y P DP GD T+ V RLS+ +E L + ++G ++ +R++ D
Sbjct: 88 YKPNEDPNIRGDAFKTLIVARLSYEANEQDLEREFGRFGNIERIRIITDTHAHEKSKNKK 147
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E ER+MR A + C
Sbjct: 148 KKPHRGYAFVVFERERDMRAALDSC 172
>gi|320582971|gb|EFW97188.1| Putative RNA-binding protein [Ogataea parapolymorpha DL-1]
Length = 263
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+I H ++VGRL H E L+K S++G + LRL R+ TG S+ YAF+E+E
Sbjct: 112 SIKSKHGVIYVGRLPHGFEEKELKKYFSQFGEIIRLRLSRNKKTGKSKHYAFIEFE 167
>gi|384497600|gb|EIE88091.1| hypothetical protein RO3G_12802 [Rhizopus delemar RA 99-880]
Length = 178
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
++DP D GDP T+FV LS +E L+K +RL+RD G SR YA
Sbjct: 1 MHDPEKDANITGDPFNTLFVTHLSPELTESDLQKEFE-------IRLIRD-ENGKSRCYA 52
Query: 106 FVEYETEREMRRAYE 120
F+E+E E++MR AY+
Sbjct: 53 FIEFEREKDMRAAYK 67
>gi|242003014|ref|XP_002422579.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
gi|212505369|gb|EEB09841.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
Length = 858
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
H TVFV L T ED +R+ S G + +LRLVRD G S+GY +VE+E E RA
Sbjct: 601 HRTVFVSNLDFTTEEDVIRETFSCCGEITDLRLVRD-YKGRSKGYCYVEFEKSVEAARA 658
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+FV L T+ + L+ SK+G +K++RLV G S+G A+VE+E E +A
Sbjct: 698 LFVRGLPFSTTVEDLKTLFSKFGSLKDVRLV-TYRNGHSKGLAYVEFEDEASAAQA 752
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 51 GDPK---AIGDP-------HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGA 100
GD K AI DP H ++V LSH +ED L++ SK+G + LR+VR + G
Sbjct: 762 GDRKIGVAISDPTKKMQIDHKKLYVSNLSHTMTEDDLQELFSKFGEISALRVVR-MPNGN 820
Query: 101 SRGYAFVEYETEREMRRAYEVCG 123
S+G AFVEY E + A + G
Sbjct: 821 SKGIAFVEYNQEDHAKEAMTLNG 843
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-related protein NRP [Rattus norvegicus]
Length = 715
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TLR++ G V+ R+V D TG+S+G+
Sbjct: 562 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLRESFD--GSVR-ARIVTDRETGSSKGFG 618
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 619 FVDFNSEEDAKAAKE 633
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|167388419|ref|XP_001733426.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898159|gb|EDR25103.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 385
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + +GD P A I P +F+ +++ T+E+ L + KYG+++++ ++RD T
Sbjct: 207 SRAEVLEMIGDLPFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTK 266
Query: 100 ASRGYAFVEYETEREMRRAYE 120
S GY F+E+ET+ AY+
Sbjct: 267 KSLGYGFIEFETKEGCENAYQ 287
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+P +FVG LS +EDTL + ++YG +K++R+ D TG +G+A+VE+ ++
Sbjct: 141 EPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASKK 200
Query: 118 AYE 120
A+E
Sbjct: 201 AFE 203
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
D T+FVG+LS D L + ++ G V + R+ D TG SRG+ +V + T
Sbjct: 41 DATKTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFAT 94
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +FV LS T+ D LR+A +K+G V + R+V D VTG S+G+ FV Y + + +
Sbjct: 45 DPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASK 104
Query: 118 AYE 120
E
Sbjct: 105 GIE 107
>gi|346971277|gb|EGY14729.1| U1 small nuclear ribonucleoprotein [Verticillium dahliae VdLs.17]
Length = 416
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI---------V 97
Y P DP GD T+ V RLS+ +E L + ++G ++ +R++ D
Sbjct: 88 YKPNEDPNIRGDAFKTLIVARLSYEANEQDLEREFGRFGNIERIRIITDTHAHEKSKNKK 147
Query: 98 TGASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E ER+MR A + C
Sbjct: 148 KKPHRGYAFVVFERERDMRAALDSC 172
>gi|167390856|ref|XP_001739535.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896809|gb|EDR24136.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 351
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + +GD P A I P +F+ +++ T+E+ L + KYG+++++ ++RD T
Sbjct: 207 SRAEVLEMIGDLPFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTK 266
Query: 100 ASRGYAFVEYETEREMRRAYE 120
S GY F+E+ET+ AY+
Sbjct: 267 KSLGYGFIEFETKEGCENAYQ 287
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++VG LS T++DTLR+A +YG V + ++RD TG SRG+ FV Y +E E A
Sbjct: 3 AKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNA 60
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 50 LGDPKAIG-----DPHC---TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
+G PKA G DP TVFV L + T+ED LR+ + G++ ++RLVRD G S
Sbjct: 607 VGSPKAHGEHVVHDPSRDDRTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRD-YAGRS 665
Query: 102 RGYAFVEYE 110
+GYA+VE+E
Sbjct: 666 KGYAYVEFE 674
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+F+G LS F +EDTL +A ++YG+V +V D +T S+G+ FV++ +E E +A
Sbjct: 38 LFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKA 93
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+FVG +S+ T E LR+A SKYG V + +++ D TG SRG+AFV + + E A ++
Sbjct: 36 IFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLD 95
Query: 123 G 123
G
Sbjct: 96 G 96
>gi|67482015|ref|XP_656357.1| U1 small nuclear ribonucleoprotein subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473555|gb|EAL50974.1| U1 small nuclear ribonucleoprotein subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 509
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L + +DP + KA +P+ T+ V RL T E L++ S+YG +K + +++D+ G
Sbjct: 85 LRTQIQTWDPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKDL-KG 143
Query: 100 ASRGYAFVEY----ETEREMRRA 118
++GYAFVEY E ER RRA
Sbjct: 144 INKGYAFVEYNHRSEAERACRRA 166
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 146 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 195
>gi|358252994|dbj|GAA51249.1| peptidyl-prolyl cis-trans isomerase-like 4 [Clonorchis sinensis]
Length = 1331
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 44 AGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
A L +GD P A + P +FV RL+ T+ + L S++G +K+ ++RD TGAS
Sbjct: 582 AQLLTLIGDLPDADVKPPDNVLFVCRLNPVTTSEDLEIIFSRFGEIKSCEVIRDRRTGAS 641
Query: 102 RGYAFVEYETEREMRRAY 119
YAFVE+E E + AY
Sbjct: 642 LQYAFVEFENESDCENAY 659
>gi|218188225|gb|EEC70652.1| hypothetical protein OsI_01937 [Oryza sativa Indica Group]
Length = 382
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G P +FV S+ T+E L K SKYGRV + R+VRD +G SRG+ F+ E + +
Sbjct: 296 LGKPGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDA 355
Query: 116 RRAYEVC 122
A C
Sbjct: 356 DAAIRAC 362
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 44 AGLYDPLG-DPKAIG-------DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD 95
A +Y P+G DP A+G D VF+G L + +ED +++ +S YG + LV+D
Sbjct: 298 APVYPPIGFDPSALGVVSTQVPDGPDKVFIGGLPYHLTEDQIKEILSSYGPLNAFNLVKD 357
Query: 96 IVTGASRGYAFVEYE 110
TG S+GYAF +Y+
Sbjct: 358 PNTGLSKGYAFFQYK 372
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 4 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 53
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|300175328|emb|CBK20639.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+F+G LS+ T E+ LR+ KYG +++L +V+D G SRGYAFVEY +M AY+
Sbjct: 3 TLFIGNLSYLTQENRLRELCEKYGPIESLVIVKD-HDGKSRGYAFVEYTYSNDMTTAYK 60
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 161 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 210
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|307109660|gb|EFN57897.1| hypothetical protein CHLNCDRAFT_141933 [Chlorella variabilis]
Length = 505
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 47 YDPLGD-PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
Y P G P+ + + T++VG+L + T E T+RK YG V ++L+ D TG S+G+
Sbjct: 17 YSPRGYIPRPGHETNKTIYVGQLRYDTDERTVRKWFEAYGTVVTVKLIYDKETGRSKGFG 76
Query: 106 FVEYETEREMRRAYEVCG 123
FV +E +R+ R A G
Sbjct: 77 FVSFEDDRDARDALNDAG 94
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C ++VG + + EDTL++A S +G +KN+ L D +T +GYAF+EYE + A E
Sbjct: 70 CRIYVGSIYYELREDTLKQAFSPFGPIKNIDLSWDPLTMKHKGYAFIEYEIPEAAQLALE 129
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + + D ++ +G++K+ L D VTG +GY F+EYE + + A
Sbjct: 169 IYVSSVHPDLAADDIKSVFEAFGKIKSCELAPDAVTGKHKGYGFLEYEKPQSAQDA 224
>gi|89268185|emb|CAJ83666.1| peptidylprolyl isomerase (cyclophilin)-like 4 [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 219 TQAVLLEMVGDIPDADIRPPENVLFVCKLNPVTTDEDLEIIFSRFGSIKSCEIIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E++ +AY
Sbjct: 279 ESLCYAFIEFEKEQDCEKAY 298
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|194696904|gb|ACF82536.1| unknown [Zea mays]
gi|195620946|gb|ACG32303.1| hypothetical protein [Zea mays]
gi|413945425|gb|AFW78074.1| hypothetical protein ZEAMMB73_201613 [Zea mays]
Length = 176
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+P CTVF+G L E L + + + GRV +L + RD T +GYAF EYETE +
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 118 AYEV 121
A ++
Sbjct: 64 AVKL 67
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 208
>gi|148906727|gb|ABR16511.1| unknown [Picea sitchensis]
Length = 635
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
IG P +F+ S T+E L K S++GRV ++R+VRD +TG SRG+ F+ E +
Sbjct: 549 IGKPGNNLFIAGFSFVTTERDLEKKFSRFGRVNDVRIVRDKLTGDSRGFGFLSLERD 605
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+FVG LS SE+ LR ++YG VK ++L D TG RG+AFVE E E + ++A +
Sbjct: 1 MTIFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAID 60
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+P +FVG LS +ED L + S+YG VK++R+ D TG+ +G+A+VE+ +
Sbjct: 411 EPSAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKS 470
Query: 118 AYE 120
AYE
Sbjct: 471 AYE 473
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
++FVGRLS + L + + G V + R+ D TG SRG+A+V +
Sbjct: 315 SIFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTF 362
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+FVG +S+ T E LR+A SKYG V + +++ D TG SRG+AFV + + E A ++
Sbjct: 36 IFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLD 95
Query: 123 G 123
G
Sbjct: 96 G 96
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 143 FVKKAEAENA 152
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
T++VG L SED L S G VK+ +++R+ + YAF+EY T
Sbjct: 8 TLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIRE---PGNDPYAFIEYST 54
>gi|189306|gb|AAA59954.1| nucleolin [Homo sapiens]
Length = 707
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 557 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 613
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 614 FVDFNSEEDAKEAME 628
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS +TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 83 PGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVS 142
Query: 109 YETEREMRRAYE 120
+ + E A +
Sbjct: 143 FVKKAEAENAIQ 154
>gi|358336551|dbj|GAA55028.1| nucleolar protein 12 [Clonorchis sinensis]
Length = 459
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+VF+G L E+ +R AMSK+G + N+RL+RD TGA +G+ FV+Y
Sbjct: 267 SVFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQY 314
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++VG LS+ +ED L++A ++YG+V ++L D TG RG+AFVE ETE + A E
Sbjct: 1 MSIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIE 60
Query: 121 VC 122
Sbjct: 61 AL 62
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 54 KAIGD----PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
KA GD P +FVG LS +ED L + S YG VK++R+ D +G +G+ +VE+
Sbjct: 398 KAFGDATSAPSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEF 457
Query: 110 ETEREMRRAYE 120
E ++A+E
Sbjct: 458 EDVESAKKAHE 468
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEV 121
T+FVG+LS D L ++ G V + R+ D TG SRG+ FV + + + +A E+
Sbjct: 310 TIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKALEL 369
Query: 122 CG 123
G
Sbjct: 370 NG 371
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED LR+ KYG V +L++++D TG SRG+ F+ +E
Sbjct: 162 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFE 211
>gi|391337926|ref|XP_003743315.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Metaseiulus
occidentalis]
Length = 430
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH VF+G L ++ +ED +R+ + +G++K LV+D TG S+GYAF EY
Sbjct: 222 PH-KVFIGGLPNYLNEDQVRELLMSFGQLKAFNLVKDTATGLSKGYAFCEY 271
>gi|403222137|dbj|BAM40269.1| U1 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 222
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 47 YDPLGDPK-AIG--------DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
YDP DP+ A G DP+ T+FV +++ +E L K YG+++ +R++ D
Sbjct: 84 YDPKYDPRLARGGTSSWLTHDPYRTLFVANIAYEVTERQLCKEFEVYGKIRRVRMIHD-R 142
Query: 98 TGASRGYAFVEYETEREMRRAYE 120
RGYAF+E+E+ER+M AY+
Sbjct: 143 KNKPRGYAFIEFESERDMVLAYK 165
>gi|168012647|ref|XP_001759013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689712|gb|EDQ76082.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 169
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
D ++VGR+ H ED +R S++G +K LRL R+ TG S+ YAF+E+E+
Sbjct: 1 DKSAVIYVGRIPHGFYEDQMRGFFSQFGDIKRLRLSRNKTTGKSKHYAFIEFES 54
>gi|119501252|ref|XP_001267383.1| rRNA processing protein gar2 [Neosartorya fischeri NRRL 181]
gi|119415548|gb|EAW25486.1| ribosomal biogenesis protein Gar2 [Neosartorya fischeri NRRL 181]
Length = 477
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 51 GDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
G+P+A G TV++GR+ H E +R S++G + LRL R+ +TG S+ YAFVE+
Sbjct: 224 GEPEAPG----TVYIGRIPHGFYEHQMRAYFSQFGEITRLRLSRNRITGRSKHYAFVEFA 279
Query: 111 T 111
+
Sbjct: 280 S 280
>gi|29654256|ref|NP_819948.1| RNA binding protein [Coxiella burnetii RSA 493]
gi|153207639|ref|ZP_01946303.1| glycine rich RNA binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|154706606|ref|YP_001424503.1| RNA binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165918878|ref|ZP_02218964.1| glycine rich RNA binding protein [Coxiella burnetii Q321]
gi|212212620|ref|YP_002303556.1| RNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212218487|ref|YP_002305274.1| RNA binding protein [Coxiella burnetii CbuK_Q154]
gi|29541522|gb|AAO90462.1| RNA binding protein [Coxiella burnetii RSA 493]
gi|120576458|gb|EAX33082.1| glycine rich RNA binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|154355892|gb|ABS77354.1| RNA binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165917426|gb|EDR36030.1| glycine rich RNA binding protein [Coxiella burnetii Q321]
gi|212011030|gb|ACJ18411.1| RNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212012749|gb|ACJ20129.1| RNA binding protein [Coxiella burnetii CbuK_Q154]
Length = 129
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 48 DPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
D L D D + ++VG L + E+ L + S++G ++++++VR+ TG S+GYAFV
Sbjct: 31 DRLDDSSWKSDNNDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGRSKGYAFV 90
Query: 108 EYETEREMRRAYEVCG 123
Y T ++ +A + G
Sbjct: 91 TYVTPKQAVKALDAHG 106
>gi|388492860|gb|AFK34496.1| unknown [Medicago truncatula]
Length = 256
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 51 GDPKAIGDPHCT-VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
G P GD T VFVG L+ T +DTLR+ KYG + ++ D VTG S+GY FV +
Sbjct: 7 GSPSQFGDTTLTKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTF 66
Query: 110 ETEREMRRAYE 120
+ ++A E
Sbjct: 67 KDADSAKKACE 77
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FVG LS T+E++L +A +KYG + + ++RD TG SRG+ FV+Y+ + + A E
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALE 64
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++G L++ SED LR A S++G+V + ++ D +G S+G+ F+E + E R A E
Sbjct: 1 MNIYIGNLAYTVSEDDLRDAFSQFGQVDSANIINDKFSGRSKGFGFIEMSNDSEAREAIE 60
>gi|169625439|ref|XP_001806123.1| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
gi|160705655|gb|EAT76571.2| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
Length = 386
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGA------ 100
Y P DPK GD T+FV RL++ + D L + +YG ++ +R+V DI
Sbjct: 88 YKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLEREFGRYGPIERIRIVEDITAPPDAPPKK 147
Query: 101 -SRGYAFVEYE 110
RGYAF+ YE
Sbjct: 148 RKRGYAFIVYE 158
>gi|24661390|ref|NP_729457.1| boule, isoform A [Drosophila melanogaster]
gi|24661394|ref|NP_729458.1| boule, isoform C [Drosophila melanogaster]
gi|23093862|gb|AAF50316.3| boule, isoform A [Drosophila melanogaster]
gi|23093863|gb|AAN11987.1| boule, isoform C [Drosophila melanogaster]
Length = 189
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|195999092|ref|XP_002109414.1| hypothetical protein TRIADDRAFT_53423 [Trichoplax adhaerens]
gi|190587538|gb|EDV27580.1| hypothetical protein TRIADDRAFT_53423 [Trichoplax adhaerens]
Length = 131
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 4 NNINSVF-YAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCT 62
+N S+F + GSY P++AGSIDGTD HD A+ RA+ Y P + DP+ T
Sbjct: 8 DNWVSLFSHRGSYDPLRAGSIDGTDSLAHDRAVIRAMTSR----YKP--NTLVATDPNRT 61
Query: 63 VFVGRLSHFTSE 74
+F+GRL+ T+E
Sbjct: 62 LFIGRLNPKTTE 73
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+FVG LS T+E++L +A +KYG + + ++RD TG SRG+ FV+Y+ + + A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 119 YE 120
E
Sbjct: 63 LE 64
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++G L++ SED LR A S++G V N ++ D +G S+G+ FVE + E R A E
Sbjct: 1 MNIYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIE 60
>gi|154335039|ref|XP_001563766.1| putative U1 small nuclear ribonucleoprotein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060788|emb|CAM37804.1| putative U1 small nuclear ribonucleoprotein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 281
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%)
Query: 48 DPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
+P D DP TV + L T E+ LR ++GRV N+R+VR TG SR YAFV
Sbjct: 121 NPFTDLNVRSDPLRTVVMANLHPETVEEDLRHFADQFGRVLNVRIVRHHKTGKSRRYAFV 180
Query: 108 EYETEREMRRAYE 120
E+ E R+A +
Sbjct: 181 EFNLVGEARKAIQ 193
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FV RLS +T++ +LR+ S +G++K RL+RD T +G+ F+ +++E + R+A +
Sbjct: 7 AQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALK 66
>gi|161831384|ref|YP_001596772.1| glycine-rich RNA binding protein [Coxiella burnetii RSA 331]
gi|161763251|gb|ABX78893.1| glycine-rich RNA binding protein [Coxiella burnetii RSA 331]
Length = 128
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 35 ICRALLC-----SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKN 89
+C AL+ S G + L D D + ++VG L + E+ L + S++G +++
Sbjct: 12 VCFALILLIIAISMFGRGNRLDDSSWKSDNNDQIYVGNLPYHVVENDLHQYFSRFGAIES 71
Query: 90 LRLVRDIVTGASRGYAFVEYETEREMRRAYEVCG 123
+++VR+ TG S+GYAFV Y T ++ +A + G
Sbjct: 72 VKIVRNFRTGRSKGYAFVTYVTPKQAVKALDAHG 105
>gi|347826795|emb|CCD42492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 436
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y P ++ + A ++ + L+ P DP GD T+ V RL + +E
Sbjct: 56 YQPTESWLQRKDRVKLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATE 115
Query: 75 DTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
L + ++G ++ +R+V D RGYAFV +E E++MR E C
Sbjct: 116 KDLEREFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMRAGLENC 171
>gi|167382928|ref|XP_001736333.1| U1 small nuclear ribonucleoprotein 70 kDa [Entamoeba dispar SAW760]
gi|165901504|gb|EDR27587.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
dispar SAW760]
Length = 422
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
L + +DP + KA +P+ T+ V RL T E L++ +YG +K + +++D+ G
Sbjct: 85 LRTQIQTWDPTHNLKATDNPNRTIVVLRLPKKTDESILQQLFGEYGEIKKIVIIKDL-KG 143
Query: 100 ASRGYAFVEY----ETEREMRRA 118
++GYAFVEY E ER RRA
Sbjct: 144 INKGYAFVEYNHRSEAERACRRA 166
>gi|195605172|gb|ACG24416.1| RNA recognition motif-containing protein [Zea mays]
gi|223944379|gb|ACN26273.1| unknown [Zea mays]
gi|413945426|gb|AFW78075.1| RNA recognition motif protein-containing protein [Zea mays]
Length = 190
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T +GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETE 58
>gi|293336865|ref|NP_001170769.1| uncharacterized protein LOC100384862 [Zea mays]
gi|238007432|gb|ACR34751.1| unknown [Zea mays]
Length = 191
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T +GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETE 58
>gi|145353025|ref|XP_001420832.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581067|gb|ABO99125.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 330
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P ++FV +L+ T+++ L S++G+V + ++RD TGAS GYAFV +E + E +A
Sbjct: 240 PEESLFVCKLNPVTTDEDLEIIFSRFGKVLSCDVIRDFKTGASLGYAFVNFEHKHEAEQA 299
Query: 119 Y 119
Y
Sbjct: 300 Y 300
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 59 PHCTVFVGRLSHFTSE-DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
P ++FVG LS F +E D L +KY VK +R++ D +TGASR + FV + E E R
Sbjct: 157 PEFSLFVGDLSPFATEADLLSLFQTKYNSVKTVRVMTDPITGASRCFGFVRFANETERRN 216
Query: 118 A 118
A
Sbjct: 217 A 217
>gi|281365909|ref|NP_001163394.1| boule, isoform E [Drosophila melanogaster]
gi|41058247|gb|AAR99153.1| GH12029p [Drosophila melanogaster]
gi|272455116|gb|ACZ94665.1| boule, isoform E [Drosophila melanogaster]
Length = 95
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 44 AGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRG 103
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+G
Sbjct: 16 GGLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKG 74
Query: 104 YAFVEYETEREMRR 117
Y FV +ETE+E +R
Sbjct: 75 YGFVTFETEQEAQR 88
>gi|49387752|dbj|BAD26240.1| putative RNA-binding protein 10 [Oryza sativa Japonica Group]
Length = 928
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P TV V LS T+ED L + ++++G ++++R++++ +G SRG+AF+++ T RR
Sbjct: 166 PSATVVVKGLSQKTNEDDLNQILAEWGPLRSVRVIKERSSGMSRGFAFIDFPTVEAARRM 225
Query: 119 YEVCG 123
E G
Sbjct: 226 MEGVG 230
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G H V G L E+ LR +K+ +K++RLVRD T SRG+AF+ + + E
Sbjct: 325 LGPTHVLVVRG-LDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFIHFHSVEEA 383
Query: 116 RRAYEVC 122
+A E
Sbjct: 384 TKALEAT 390
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FVG LS + + L +A +YG V R++ D TG SRGY FV Y T+ EM A E
Sbjct: 27 LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALE 84
>gi|387047|gb|AAA36961.1| nucleolin, partial [Cricetus cricetus]
Length = 192
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 35 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 91
Query: 106 FVEYETEREMRRAYEVC 122
FV++ +E + + A E
Sbjct: 92 FVDFNSEEDAKAAKEAM 108
>gi|400601281|gb|EJP68924.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 368
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 58 DP-HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE-------Y 109
DP H +FVG L T++D L KA S++G V+ R++RD T S+GY FV +
Sbjct: 228 DPSHLRLFVGNLGGETTDDALLKAFSRWGSVQKARVIRDKRTSKSKGYGFVSFSDADDFF 287
Query: 110 ETEREMRRAY 119
+ +EM Y
Sbjct: 288 QAAKEMNNKY 297
>gi|195012041|ref|XP_001983445.1| GH15900 [Drosophila grimshawi]
gi|193896927|gb|EDV95793.1| GH15900 [Drosophila grimshawi]
Length = 233
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLEAPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|191961790|ref|NP_001122114.1| peptidylprolyl isomerase-like 4 [Xenopus (Silurana) tropicalis]
gi|189442188|gb|AAI67357.1| LOC733774 protein [Xenopus (Silurana) tropicalis]
Length = 471
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 219 TQAVLLEMVGDIPDADIRPPENVLFVCKLNPVTTDEDLEIIFSRFGSIKSCEIIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E++ +AY
Sbjct: 279 ESLCYAFIEFEKEQDCEKAY 298
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++VG LS+ T ED LR S+YG V++++++ D TG S+G+ FVE TE E + A
Sbjct: 5 LYVGNLSYNTYEDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAA 60
>gi|298707737|emb|CBJ26054.1| poly(A) binding protein, cytoplasmic 4-like [Ectocarpus
siliculosus]
Length = 648
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
S+ L D G P+ C +FVG L+ +E+ L KA ++GRV ++ + RD TG +
Sbjct: 191 STNSLKDDPGTPE-----ECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKN 245
Query: 102 RGYAFVEYETEREMRRAYE 120
GY FV+ + +E R A E
Sbjct: 246 LGYGFVKLSSHQEARAAKE 264
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
+ P ++V LS T+E++LR A +G++ ++LV D + RG+AF+ Y TE E
Sbjct: 82 SFPSPQTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEE 141
Query: 115 MRRAYE 120
++A E
Sbjct: 142 SQKAIE 147
>gi|157110364|ref|XP_001651069.1| peptidyl-prolyl cis-trans isomerase (cyclophilin) [Aedes aegypti]
gi|108878740|gb|EAT42965.1| AAEL005541-PA [Aedes aegypti]
Length = 614
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A + + +GD P A I P +FV +L+ T++D L+ S++G++K ++RD V+G
Sbjct: 170 ARATILEIVGDIPDAEIAPPENVLFVCKLNPVTTDDDLQIIFSRFGKIKGCEVIRDKVSG 229
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E ++ AY
Sbjct: 230 DSLQYAFIEFEDKKSCENAY 249
>gi|195640602|gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]
Length = 190
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T +GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETE 58
>gi|226222462|gb|ACO38649.1| nucleolin-like protein [Rattus norvegicus]
Length = 569
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 416 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 472
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 473 FVDFNSEEDAKTAKE 487
>gi|195490954|ref|XP_002093358.1| GE21261 [Drosophila yakuba]
gi|194179459|gb|EDW93070.1| GE21261 [Drosophila yakuba]
Length = 228
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|315056769|ref|XP_003177759.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Arthroderma
gypseum CBS 118893]
gi|311339605|gb|EFQ98807.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Arthroderma
gypseum CBS 118893]
Length = 507
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAF+E+ +
Sbjct: 238 TVYVGRIPHGFYEDEMRAYFSQFGEISRLRLSRNRTTGKSKHYAFIEFTS 287
>gi|157110942|ref|XP_001651320.1| cyclophilin-6 [Aedes aegypti]
gi|108878567|gb|EAT42792.1| AAEL005690-PA [Aedes aegypti]
Length = 664
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A + + +GD P A I P +FV +L+ T++D L+ S++G++K ++RD V+G
Sbjct: 220 ARATILEIVGDIPDAEIAPPENVLFVCKLNPVTTDDDLQIIFSRFGKIKGCEVIRDKVSG 279
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E ++ AY
Sbjct: 280 DSLQYAFIEFEDKKSCENAY 299
>gi|115444455|ref|NP_001046007.1| Os02g0167500 [Oryza sativa Japonica Group]
gi|49387753|dbj|BAD26241.1| putative RNA-binding protein 10 [Oryza sativa Japonica Group]
gi|113535538|dbj|BAF07921.1| Os02g0167500 [Oryza sativa Japonica Group]
Length = 889
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P TV V LS T+ED L + ++++G ++++R++++ +G SRG+AF+++ T RR
Sbjct: 166 PSATVVVKGLSQKTNEDDLNQILAEWGPLRSVRVIKERSSGMSRGFAFIDFPTVEAARRM 225
Query: 119 YEVCG 123
E G
Sbjct: 226 MEGVG 230
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G H V G L E+ LR +K+ +K++RLVRD T SRG+AF+ + + E
Sbjct: 325 LGPTHVLVVRG-LDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFIHFHSVEEA 383
Query: 116 RRAYEVC 122
+A E
Sbjct: 384 TKALEAT 390
>gi|357135466|ref|XP_003569330.1| PREDICTED: uncharacterized protein LOC100845190 [Brachypodium
distachyon]
Length = 921
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P TV V LS TSED L + ++++G ++++R++++ +G SRG+AF+++ T R+
Sbjct: 162 PSATVVVKGLSQKTSEDDLYQILAEWGPLRSVRVIKERTSGMSRGFAFIDFPTVEAARKM 221
Query: 119 YEVCG 123
E G
Sbjct: 222 MEGTG 226
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 29 HPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVK 88
P + A SS L+ G + G H V G L E+ LR +K+ +K
Sbjct: 292 EPRTDDAPPADATSSTQLFGKRGSEQ--GPTHVLVVRG-LDENADEEMLRYEFAKHAPIK 348
Query: 89 NLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
++RLVRD T SRG+AFV + + + +A E
Sbjct: 349 DIRLVRDKFTHVSRGFAFVHFHSVEDATKALEAT 382
>gi|195326221|ref|XP_002029828.1| GM24891 [Drosophila sechellia]
gi|194118771|gb|EDW40814.1| GM24891 [Drosophila sechellia]
Length = 228
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + D +R A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 95 HFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 154
Query: 120 EVCG 123
+ G
Sbjct: 155 QQMG 158
>gi|449709532|gb|EMD48780.1| peptidyl prolyl cistrans isomerase, putative [Entamoeba histolytica
KU27]
Length = 351
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + +GD P A I P +F+ +++ T+E+ L + KYG+++++ ++RD +
Sbjct: 207 SRAEVLEMIGDLPFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKSK 266
Query: 100 ASRGYAFVEYETEREMRRAYE 120
S GY F+E+ET+ AY+
Sbjct: 267 KSLGYGFIEFETKEGCENAYQ 287
>gi|442631220|ref|NP_001261614.1| boule, isoform F [Drosophila melanogaster]
gi|440215525|gb|AGB94309.1| boule, isoform F [Drosophila melanogaster]
Length = 233
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|17647207|ref|NP_523989.1| boule, isoform B [Drosophila melanogaster]
gi|24661386|ref|NP_729456.1| boule, isoform D [Drosophila melanogaster]
gi|44887716|sp|Q24207.1|BOULE_DROME RecName: Full=Protein boule
gi|1395211|gb|AAC47133.1| boule protein [Drosophila melanogaster]
gi|23093860|gb|AAF50317.3| boule, isoform B [Drosophila melanogaster]
gi|23093861|gb|AAN11986.1| boule, isoform D [Drosophila melanogaster]
Length = 228
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|119602591|gb|EAW82185.1| fuse-binding protein-interacting repressor, isoform CRA_b [Homo
sapiens]
Length = 171
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 18 IQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH-------CTVFVGRLSH 70
I++ + T H + + G DPL +++ C V+VG + +
Sbjct: 36 IKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYY 95
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 96 ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
++F+G L + SED L++ + YG VK++RL D TG RG+AFVE +TE E
Sbjct: 1 MSIFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAE 54
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++VG LS+ +E+ L+ A S+YG+V ++L D TG RG+AFVE ETE + A E
Sbjct: 1 MSIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIE 60
Query: 121 VC 122
Sbjct: 61 AL 62
>gi|363745135|ref|XP_423964.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Gallus gallus]
Length = 158
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 18 IQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH-------CTVFVGRLSH 70
I++ + T H + + G DPL +++ C V+VG + +
Sbjct: 36 IKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYY 95
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 96 ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
>gi|296827452|ref|XP_002851171.1| ribosomal biogenesis protein Gar2 [Arthroderma otae CBS 113480]
gi|238838725|gb|EEQ28387.1| ribosomal biogenesis protein Gar2 [Arthroderma otae CBS 113480]
Length = 519
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAFVE+ +
Sbjct: 228 TVYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFVEFTS 277
>gi|387050|gb|AAA36966.1| nucleolin, C23, partial [Cricetulus griseus]
Length = 679
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 522 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 578
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 579 FVDFNSEEDAKAAKE 593
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ KN V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 275 LFIGNLNPNKSVAELKVAISE-PFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELT 333
Query: 123 G 123
G
Sbjct: 334 G 334
>gi|128844|sp|P13383.3|NUCL_RAT RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|205792|gb|AAA41732.1| nucleolin [Rattus norvegicus]
Length = 713
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 560 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 616
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 617 FVDFNSEEDAKAAKE 631
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ +L V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 313 LFIGNLNPNKSVAELKVAISELFAKNDLAAV-DVRTGTNRKFGYVDFESAEDLEKALELT 371
Query: 123 G 123
G
Sbjct: 372 G 372
>gi|128842|sp|P08199.2|NUCL_MESAU RecName: Full=Nucleolin; AltName: Full=Protein C23
Length = 714
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 557 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 613
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 614 FVDFNSEEDAKAAKE 628
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ KN V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 310 LFIGNLNPNKSVAELKVAISE-PFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELT 368
Query: 123 G 123
G
Sbjct: 369 G 369
>gi|354502803|ref|XP_003513471.1| PREDICTED: nucleolin [Cricetulus griseus]
Length = 762
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 606 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 662
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 663 FVDFNSEEDAKAAKE 677
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ +L +V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 359 LFIGNLNPNKSVAELKVAISELFAKNDLAVV-DVRTGTNRKFGYVDFESAEDLEKALELT 417
Query: 123 G 123
G
Sbjct: 418 G 418
>gi|149016331|gb|EDL75577.1| nucleolin, isoform CRA_b [Rattus norvegicus]
Length = 698
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 545 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 601
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 602 FVDFNSEEDAKAAKE 616
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ +L V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 298 LFIGNLNPNKSVAELKVAISELFAKNDLAAV-DVRTGTNRKFGYVDFESAEDLEKALELT 356
Query: 123 G 123
G
Sbjct: 357 G 357
>gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA_e [Rattus norvegicus]
Length = 505
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 352 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 408
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 409 FVDFNSEEDAKAAKE 423
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ +L V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 105 LFIGNLNPNKSVAELKVAISELFAKNDLAAV-DVRTGTNRKFGYVDFESAEDLEKALELT 163
Query: 123 G 123
G
Sbjct: 164 G 164
>gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA_d [Rattus norvegicus]
gi|149016334|gb|EDL75580.1| nucleolin, isoform CRA_d [Rattus norvegicus]
Length = 496
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 343 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 399
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 400 FVDFNSEEDAKAAKE 414
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ +L V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 96 LFIGNLNPNKSVAELKVAISELFAKNDLAAV-DVRTGTNRKFGYVDFESAEDLEKALELT 154
Query: 123 G 123
G
Sbjct: 155 G 155
>gi|161760644|ref|NP_036881.2| nucleolin [Rattus norvegicus]
gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norvegicus]
gi|149016332|gb|EDL75578.1| nucleolin, isoform CRA_c [Rattus norvegicus]
Length = 714
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 561 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFG 617
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 618 FVDFNSEEDAKAAKE 632
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ S L+ A+S+ +L V D+ TG +R + +V++E+ ++ +A E+
Sbjct: 314 LFIGNLNPNKSVAELKVAISELFAKNDLAAV-DVRTGTNRKFGYVDFESAEDLEKALELT 372
Query: 123 G 123
G
Sbjct: 373 G 373
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS S D +R A + +G++ + R+VRD+ TG S+GY F+ + + + A
Sbjct: 96 HFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAI 155
Query: 120 E 120
+
Sbjct: 156 Q 156
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 57 GDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
+P+ VFV L+ T+ +TLR+A K+G VK +R+V D V+G S+G+ +V Y T
Sbjct: 40 AEPNEIVFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYAT 94
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +F+ LS T+ D L++A +K+G V + R+V D VTG S+G+ FV Y T + +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAK 92
Query: 118 AYE 120
E
Sbjct: 93 GIE 95
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
I +C +F+G L+ T+E+TLR +KYG V +L++++D TG SRG+ F+ +E
Sbjct: 89 ISKDNCKMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFE 143
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
P+ D +FVG + + S+YG + + +L+ D TG SRG+ FV Y++
Sbjct: 170 PREEQDKTGKIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSP 229
Query: 113 REMRR 117
+ R
Sbjct: 230 DAVDR 234
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +FV LS T+ + LR A +K+G V + R+V D V+G S+G+ FV Y T E +
Sbjct: 32 DPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATK 91
Query: 118 AYE 120
E
Sbjct: 92 GIE 94
>gi|426338868|ref|XP_004033393.1| PREDICTED: nucleolin [Gorilla gorilla gorilla]
Length = 710
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 557 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 613
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 614 FVDFNSEEDAKAAKE 628
>gi|297265320|ref|XP_001116949.2| PREDICTED: nucleolin-like [Macaca mulatta]
gi|75075722|sp|Q4R4J7.3|NUCL_MACFA RecName: Full=Nucleolin
gi|67967725|dbj|BAE00345.1| unnamed protein product [Macaca fascicularis]
gi|67971272|dbj|BAE01978.1| unnamed protein product [Macaca fascicularis]
Length = 711
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 558 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 614
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 615 FVDFNSEEDAKAAKE 629
>gi|197098386|ref|NP_001127178.1| nucleolin [Pongo abelii]
gi|75070972|sp|Q5RF26.3|NUCL_PONAB RecName: Full=Nucleolin
gi|55725699|emb|CAH89631.1| hypothetical protein [Pongo abelii]
Length = 712
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 559 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 615
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 616 FVDFNSEEDAKAAKE 630
>gi|410969636|ref|XP_003991299.1| PREDICTED: nucleolin [Felis catus]
Length = 715
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 562 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 618
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 619 FVDFNSEEDAKAAKE 633
>gi|403278071|ref|XP_003930653.1| PREDICTED: nucleolin-like [Saimiri boliviensis boliviensis]
Length = 713
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 560 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 616
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 617 FVDFNSEEDAKAAKE 631
>gi|402889647|ref|XP_003908120.1| PREDICTED: nucleolin isoform 3 [Papio anubis]
Length = 634
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 481 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 537
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 538 FVDFNSEEDAKAAKE 552
>gi|402889645|ref|XP_003908119.1| PREDICTED: nucleolin isoform 2 [Papio anubis]
Length = 683
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 530 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 586
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 587 FVDFNSEEDAKAAKE 601
>gi|402889643|ref|XP_003908118.1| PREDICTED: nucleolin isoform 1 [Papio anubis]
Length = 695
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 542 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 598
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 599 FVDFNSEEDAKAAKE 613
>gi|397502540|ref|XP_003821912.1| PREDICTED: nucleolin-like [Pan paniscus]
Length = 710
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 557 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 613
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 614 FVDFNSEEDAKAAKE 628
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 54 KAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETER 113
+ + +P +FV LS T+ +TLR+A K+G V + R+V D V+G S+G+ FV+Y T
Sbjct: 44 RQMAEPSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLE 103
Query: 114 EMRRAYE 120
+ + E
Sbjct: 104 DAAKGIE 110
>gi|374721345|gb|AEZ68008.1| nucleolin [Chlorocebus aethiops]
Length = 712
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 559 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 615
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 616 FVDFNSEEDAKAAKE 630
>gi|355761078|gb|EHH61752.1| hypothetical protein EGM_19839, partial [Macaca fascicularis]
Length = 705
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 552 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 608
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 609 FVDFNSEEDAKAAKE 623
>gi|355565264|gb|EHH21753.1| hypothetical protein EGK_04889, partial [Macaca mulatta]
Length = 705
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 552 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 608
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 609 FVDFNSEEDAKAAKE 623
>gi|345790650|ref|XP_850477.2| PREDICTED: nucleolin isoform 1 [Canis lupus familiaris]
Length = 715
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 562 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 618
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 619 FVDFNSEEDAKAAKE 633
>gi|343961999|dbj|BAK62587.1| nucleolin [Pan troglodytes]
Length = 537
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 384 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 440
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 441 FVDFNSEEDAKAAKE 455
>gi|332815667|ref|XP_516145.3| PREDICTED: nucleolin [Pan troglodytes]
Length = 711
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 558 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 614
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 615 FVDFNSEEDAKAAKE 629
>gi|301764124|ref|XP_002917484.1| PREDICTED: nucleolin-like [Ailuropoda melanoleuca]
Length = 717
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 564 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 620
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 621 FVDFNSEEDAKAAKE 635
>gi|296205845|ref|XP_002749930.1| PREDICTED: uncharacterized protein LOC100395223 isoform 1
[Callithrix jacchus]
Length = 713
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 560 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 616
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 617 FVDFNSEEDAKAAKE 631
>gi|281349809|gb|EFB25393.1| hypothetical protein PANDA_005719 [Ailuropoda melanoleuca]
Length = 645
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 520 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 576
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 577 FVDFNSEEDAKAAKE 591
>gi|119591368|gb|EAW70962.1| nucleolin, isoform CRA_c [Homo sapiens]
gi|193785526|dbj|BAG50892.1| unnamed protein product [Homo sapiens]
Length = 536
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 383 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 439
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 440 FVDFNSEEDAKAAKE 454
>gi|34534595|dbj|BAC87055.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 450 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 506
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 507 FVDFNSEEDAKAAKE 521
>gi|21750187|dbj|BAC03738.1| unnamed protein product [Homo sapiens]
Length = 687
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 534 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 590
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 591 FVDFNSEEDAKAAKE 605
>gi|55956788|ref|NP_005372.2| nucleolin [Homo sapiens]
gi|90110781|sp|P19338.3|NUCL_HUMAN RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|62988860|gb|AAY24247.1| unknown [Homo sapiens]
gi|119591367|gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|119591369|gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|168277892|dbj|BAG10924.1| nucleolin [synthetic construct]
Length = 710
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 557 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 613
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 614 FVDFNSEEDAKAAKE 628
>gi|345305814|ref|XP_001506397.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Ornithorhynchus anatinus]
Length = 479
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 211 TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGSIKSCEVIRDWKTG 270
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +AY
Sbjct: 271 ESLCYAFIEFEKEEDCEKAY 290
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+F+ LS +TSE TLR A +G++ ++++ D ++ S+GYAFVEY TE
Sbjct: 308 LFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTE 357
>gi|89075808|ref|ZP_01162192.1| hypothetical protein SKA34_15583 [Photobacterium sp. SKA34]
gi|89048429|gb|EAR54005.1| hypothetical protein SKA34_15583 [Photobacterium sp. SKA34]
Length = 78
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+ V LS T+E LRK ++G+V N LV D +TG S+G+AFVE E E + RA +
Sbjct: 3 ILVRNLSRSTTEIQLRKIFEEFGKVGNCNLVLDAITGKSKGFAFVEMEDEEQAARAMK 60
>gi|414884451|tpg|DAA60465.1| TPA: hypothetical protein ZEAMMB73_326515 [Zea mays]
Length = 988
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 DPKAIGD---PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
D + GD P TV V LS T++D L K ++++G ++++R++R+ +G SRG+AF++
Sbjct: 225 DDRGHGDSVAPSATVVVKGLSLKTNDDDLYKILAQWGPLRSVRVIRERNSGMSRGFAFID 284
Query: 109 YETEREMRRAYEVCG 123
+ T RR E G
Sbjct: 285 FPTVEAARRMMEATG 299
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G H V G L E+ LR +K+ +K++RLVRD T SRG+AFV + + +
Sbjct: 394 LGPTHVLVVRG-LDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFVHFHSVEDA 452
Query: 116 RRAYEVC 122
+A E
Sbjct: 453 TKALEAT 459
>gi|350593751|ref|XP_003483759.1| PREDICTED: boule [Sus scrofa]
Length = 293
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + +R
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQR 100
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+FVG LS + + L +A +YG V R++ D TG SRGY FV Y T+ EM A E
Sbjct: 195 LFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETI 254
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T D L KA S++G + +++ D TG SRG+ FV + TE+ MR A E
Sbjct: 11 FVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIE 67
>gi|324511081|gb|ADY44625.1| Peptidyl-prolyl cis-trans isomerase-like protein 4 [Ascaris suum]
Length = 430
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 40 LCSSAGLYDPLGDPKAIGD--PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
+ + A + + +GD + D P +FV +L+ T+++ L S++G +K ++RD
Sbjct: 217 MAAQAQILEMVGDLRHADDRPPENVLFVCKLNPVTTDEDLEIIFSRFGAIKCCEVIRDRR 276
Query: 98 TGASRGYAFVEYETEREMRRAY 119
TGAS YAF+E+E E+ AY
Sbjct: 277 TGASLQYAFIEFEDEKSCENAY 298
>gi|414884452|tpg|DAA60466.1| TPA: hypothetical protein ZEAMMB73_326515 [Zea mays]
Length = 981
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 DPKAIGD---PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
D + GD P TV V LS T++D L K ++++G ++++R++R+ +G SRG+AF++
Sbjct: 225 DDRGHGDSVAPSATVVVKGLSLKTNDDDLYKILAQWGPLRSVRVIRERNSGMSRGFAFID 284
Query: 109 YETEREMRRAYEVCG 123
+ T RR E G
Sbjct: 285 FPTVEAARRMMEATG 299
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G H V G L E+ LR +K+ +K++RLVRD T SRG+AFV + + +
Sbjct: 394 LGPTHVLVVRG-LDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFVHFHSVEDA 452
Query: 116 RRAYEVC 122
+A E
Sbjct: 453 TKALEAT 459
>gi|307195677|gb|EFN77519.1| Protein boule [Harpegnathos saltator]
Length = 249
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG +S TSE L + S YG VK +++ D G S+GY FV +ETE E +R
Sbjct: 41 IFVGGISASTSEAELAQLFSAYGNVKATKIISDRA-GVSKGYGFVTFETEEEAKR 94
>gi|71897303|ref|NP_001026551.1| poly(U)-binding-splicing factor PUF60 [Gallus gallus]
gi|60098673|emb|CAH65167.1| hypothetical protein RCJMB04_5e8 [Gallus gallus]
Length = 366
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 18 IQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH-------CTVFVGRLSH 70
I++ + T H + + G DPL +++ C V+VG + +
Sbjct: 36 IKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYY 95
Query: 71 FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 96 ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|37906123|gb|AAP44766.1| nucleolin [Bos taurus]
Length = 203
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ R R+V D TG+S+G+
Sbjct: 65 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSIRA---RIVTDRETGSSKGFG 121
Query: 106 FVEYETEREMRRAYEV 121
FV++ +E + + A E
Sbjct: 122 FVDFNSEEDAKAAKEA 137
>gi|395823283|ref|XP_003803977.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Otolemur garnettii]
Length = 700
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 551 LQAPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 607
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 608 FVDFNSEEDAKAAKE 622
>gi|167388415|ref|XP_001738557.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898157|gb|EDR25101.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 164
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + +GD P A I P +F+ +++ T+E+ L + KYG+++++ ++RD T
Sbjct: 20 SRAEVLEMIGDLPFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTK 79
Query: 100 ASRGYAFVEYETEREMRRAYE 120
S GY F+E+ET+ AY+
Sbjct: 80 KSLGYGFIEFETKEGCENAYQ 100
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 35 ICRALLCSSAGLYDPLGDPKAIGD-------PHCT---VFVGRLSHFTSEDTLRKAMSKY 84
+ RA CSS G + P GD P T +FV LS T+++ L+ A + +
Sbjct: 28 VLRAAFCSSPG-FGPSPPSSMFGDGTEVANVPPLTTPKLFVSGLSRLTTDEKLQGAFAPF 86
Query: 85 GRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
GR+ ++V D V+G S+G+ FV Y T E +A +
Sbjct: 87 GRILEAKVVTDRVSGRSKGFGFVRYATIEEAEKARQ 122
>gi|242069431|ref|XP_002449992.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
gi|241935835|gb|EES08980.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
Length = 296
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y+P A ++ + P+ N L S GL DP +FVG L ++ +E
Sbjct: 104 YNPSLAAALGPSQPSPNLNLAAVGLTAGSGGLEDP-----------DRIFVGGLPYYFTE 152
Query: 75 DTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+R+ + +G ++ LV+D TG S+GYAF +Y+
Sbjct: 153 AQVRELLESFGPLRGFDLVKDKETGNSKGYAFCDYQ 188
>gi|119591366|gb|EAW70960.1| nucleolin, isoform CRA_a [Homo sapiens]
Length = 490
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 337 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 393
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 394 FVDFNSEEDAKAAKE 408
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus scrofa]
Length = 362
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 13 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 72
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 112 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 167
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
A D FVG L+ TS+ L +A S YG V +++ D TG SRG+ FV + E+
Sbjct: 2 AAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKS 61
Query: 115 MRRAYE 120
MR A E
Sbjct: 62 MRDAIE 67
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
A D FVG L+ TS+ L +A S YG V +++ D TG SRG+ FV + E+
Sbjct: 2 AAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKS 61
Query: 115 MRRAYE 120
MR A E
Sbjct: 62 MRDAIE 67
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+F+G LS T+ED+L A KYG ++ + ++RD TG SRG+ FV+Y+ + + A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 119 YEVC 122
+
Sbjct: 63 LDAM 66
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FV LS +T+E TL+ A S YG+V ++R++ + T S+G+ FVE+ TE E A +
Sbjct: 90 LFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALK 147
>gi|193788267|dbj|BAG53161.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 480 LQGPRGSPNAGSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 536
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 537 FVDFNSEEDAKAAKE 551
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 43 SAGLYDPLGDPKAIGDPH-------CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD 95
+ G DPL +++ C V+VG + + EDT+R+A + +G +K++ + D
Sbjct: 61 TMGFGDPLSSLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD 120
Query: 96 IVTGASRGYAFVEYETEREMRRAYE 120
VT +G+AFVEYE + A E
Sbjct: 121 SVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
++V + S+D ++ +G++K+ L R+ TG +G+ F+EYE
Sbjct: 185 IYVASIHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGFGFIEYE 232
>gi|440913256|gb|ELR62731.1| Nucleolin, partial [Bos grunniens mutus]
Length = 714
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ R R+V D TG+S+G+
Sbjct: 561 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSIRA---RIVTDRETGSSKGFG 617
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 618 FVDFNSEEDAKAAKE 632
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEV 121
T+ + LS+ +E+TL++ K +K V G S+GYAF+E+ + + + A
Sbjct: 491 TLVLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAKEALNS 546
Query: 122 C 122
C
Sbjct: 547 C 547
>gi|426221705|ref|XP_004023200.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Ovis aries]
Length = 724
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ R R+V D TG+S+G+
Sbjct: 571 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSIRA---RIVTDRETGSSKGFG 627
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 628 FVDFNSEEDAKAAKE 642
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEV 121
T+ + LS+ +E+TL++ K +K V G S+GYAF+E+ + + + A
Sbjct: 501 TLVLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAKEALNS 556
Query: 122 C 122
C
Sbjct: 557 C 557
>gi|331284195|ref|NP_001193589.1| nucleolin [Bos taurus]
gi|296490214|tpg|DAA32327.1| TPA: nucleolin [Bos taurus]
Length = 720
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ R R+V D TG+S+G+
Sbjct: 567 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSIRA---RIVTDRETGSSKGFG 623
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 624 FVDFNSEEDAKAAKE 638
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEV 121
T+ + LS+ +E+TL++ K +K V G S+GYAF+E+ + + + A
Sbjct: 497 TLVLSNLSYSATEETLQEVFEKATHIK----VPQNQNGKSKGYAFIEFASFEDAKEALNS 552
Query: 122 C 122
C
Sbjct: 553 C 553
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS TLR+A + +G + N R+VRD T S+GYAFV
Sbjct: 86 PGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVS 145
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 146 FVKKAEAESA 155
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+CTV+ G ++ +ED + KA S++G ++++R +D +GYAF+ + T+ A
Sbjct: 207 NCTVYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKD------KGYAFIRFSTKEAATHAI 260
Query: 120 E 120
E
Sbjct: 261 E 261
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
VFVG +S+ T + +LR+A KYG V R++ D TG SRG+AFV Y + E A +
Sbjct: 40 SKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQ 99
Query: 121 VC 122
Sbjct: 100 AL 101
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P + + +P +FV LS T+ + L +A +K+G V + R+V D VTG S+G+ FV+
Sbjct: 67 PSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVK 126
Query: 109 YETEREMRRAYE 120
Y T + + E
Sbjct: 127 YATLEDAAKGIE 138
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+P+ +FV LS T+ + L++A SK+G V R+V D V+G S+G+ FV Y + + +
Sbjct: 49 EPNTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEK 108
Query: 118 AYE 120
E
Sbjct: 109 GIE 111
>gi|111185612|gb|AAI19438.1| Puf60 protein [Mus musculus]
gi|152060991|gb|AAI48275.1| Puf60 protein [Mus musculus]
Length = 241
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 43 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 102
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 142 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 197
>gi|414884453|tpg|DAA60467.1| TPA: hypothetical protein ZEAMMB73_326515 [Zea mays]
Length = 867
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 DPKAIGD---PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
D + GD P TV V LS T++D L K ++++G ++++R++R+ +G SRG+AF++
Sbjct: 225 DDRGHGDSVAPSATVVVKGLSLKTNDDDLYKILAQWGPLRSVRVIRERNSGMSRGFAFID 284
Query: 109 YETEREMRRAYEVCG 123
+ T RR E G
Sbjct: 285 FPTVEAARRMMEATG 299
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G H V G L E+ LR +K+ +K++RLVRD T SRG+AFV + + +
Sbjct: 394 LGPTHVLVVRG-LDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFVHFHSVEDA 452
Query: 116 RRAYEVC 122
+A E
Sbjct: 453 TKALEAT 459
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+ED L+ SKYG V +L++++D TG SRG+ F+ +E
Sbjct: 193 CKLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFE 242
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +F+ LS T+ D L++A +K+G V + R+V D VTG S+G+ F+ Y T + +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAK 92
Query: 118 AYE 120
E
Sbjct: 93 GIE 95
>gi|194865700|ref|XP_001971560.1| GG15038 [Drosophila erecta]
gi|190653343|gb|EDV50586.1| GG15038 [Drosophila erecta]
Length = 233
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 45 GLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGY 104
GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+GY
Sbjct: 17 GLDTPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGY 75
Query: 105 AFVEYETEREMRR 117
FV +ETE+E +R
Sbjct: 76 GFVTFETEQEAQR 88
>gi|157867375|ref|XP_001682242.1| putative U1 small nuclear ribonucleoprotein [Leishmania major
strain Friedlin]
gi|68125694|emb|CAJ04192.1| putative U1 small nuclear ribonucleoprotein [Leishmania major
strain Friedlin]
Length = 283
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 48 DPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
+P D A DP TV + L T E+ LR ++GRV ++R+VR TG SR YAFV
Sbjct: 123 NPFTDLNARSDPLRTVVMANLHPETVEEDLRHFADQFGRVLSVRIVRHHRTGKSRRYAFV 182
Query: 108 EYETEREMRRAYE 120
E+ E R+A +
Sbjct: 183 EFNLVGEARKAVQ 195
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
++VG LS+ T+ED LR A S++G V+N +++D +G S+G+ FVE ++A E
Sbjct: 2 TNIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIE 61
>gi|378756227|gb|EHY66252.1| hypothetical protein NERG_00948 [Nematocida sp. 1 ERTm2]
Length = 211
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
+G+ CTVFVG + E+T+ + +S GRV + R+V D TG S+GY F YE+
Sbjct: 1 MGNRGCTVFVGNIDFTVPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYES 56
>gi|326484155|gb|EGE08165.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Trichophyton
equinum CBS 127.97]
Length = 501
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAF+E+ +
Sbjct: 232 TVYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFIEFTS 281
>gi|326469937|gb|EGD93946.1| ribosomal biogenesis protein Gar2 [Trichophyton tonsurans CBS
112818]
Length = 501
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAF+E+ +
Sbjct: 232 TVYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFIEFTS 281
>gi|302668401|ref|XP_003025772.1| hypothetical protein TRV_00034 [Trichophyton verrucosum HKI 0517]
gi|291189900|gb|EFE45161.1| hypothetical protein TRV_00034 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAF+E+ +
Sbjct: 233 TVYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFIEFTS 282
>gi|290992316|ref|XP_002678780.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Naegleria
gruberi]
gi|284092394|gb|EFC46036.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Naegleria
gruberi]
Length = 492
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + +GD P A + P +FV RL+ TSE +LR +YG + +V++ TG
Sbjct: 258 SKAIVLEMIGDLPDADVKPPDSVLFVCRLNPITSEKSLRTIFLQYGNIVKCEIVKNRKTG 317
Query: 100 ASRGYAFVEYETEREMRRAY 119
S+ YAF+E+E RA+
Sbjct: 318 KSKTYAFIEFEDAESCERAF 337
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
A D FVG L+ T + L KA S+YG + + +++ D TG SRG+ FV + E+
Sbjct: 2 ASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKS 61
Query: 115 MRRAYE 120
MR A E
Sbjct: 62 MRDAIE 67
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
H VFVG LS S D ++ A + +GR+ + R+V+D+ TG S+GY FV +
Sbjct: 105 HFHVFVGDLSPEISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSF 154
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FVG LS T+E++L +A +KYG + + ++RD TG SRG+ FV+Y+ + + A +
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALD 64
>gi|427719544|ref|YP_007067538.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427351980|gb|AFY34704.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++VG LS+ E+ L++ S+YG VK ++L D TG RG+ FVE ETE E +A E
Sbjct: 1 MSIYVGNLSYQVREEDLKQVFSEYGTVKTVQLPVDRETGRVRGFGFVEMETEAEETKAIE 60
Query: 121 VC 122
Sbjct: 61 AL 62
>gi|322702160|gb|EFY93908.1| U1 small nuclear ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 388
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
LL Y P DP GD T+ V RLS+ E L + ++G ++ +R++ D
Sbjct: 80 LLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLEREFGRFGPIERIRIITDTHA 139
Query: 97 ------VTGASRGYAFVEYETEREMRRAYEVC 122
A RGYAFV +E E+++R A + C
Sbjct: 140 HEKPNKKKKAHRGYAFVVFEREKDLRAALDSC 171
>gi|31455187|gb|AAH06494.3| NCL protein [Homo sapiens]
gi|31455191|gb|AAH06516.3| NCL protein [Homo sapiens]
gi|31455242|gb|AAH02343.3| NCL protein [Homo sapiens]
Length = 482
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ G V+ R+V D TG+S+G+
Sbjct: 329 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFG 385
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 386 FVDFNSEEDAKAAKE 400
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 36 CRALLC----SSAGLYDPLGDP--KAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKN 89
R L C S + + G P + +G+P +FV L+ T+ + LR+ +K+G V +
Sbjct: 13 LRRLFCTNSTSPSSPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAKFGEVVH 72
Query: 90 LRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
R+V D V+G S+G+ FV+Y T E + +
Sbjct: 73 ARVVTDRVSGYSKGFGFVKYATIEEASKGIQ 103
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T ++ L++A S+YG + + +++ D TG SRG+ FV + +E MR+A E
Sbjct: 9 FVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIE 65
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
VFVG L+ T+E+ L++ S GRV ++RLV D+ TG RG+AFVE+
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEF 47
>gi|195999450|ref|XP_002109593.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
gi|190587717|gb|EDV27759.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
Length = 476
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 42 SSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
SSA ++ P + D +F+G L ++ +ED +++ + +G +K LV+D TG S
Sbjct: 246 SSANIHVPGVISTVVPDTPHKLFIGGLPNYLTEDQVKELLQSFGELKAFNLVKDSATGLS 305
Query: 102 RGYAFVEY 109
+GYAF EY
Sbjct: 306 KGYAFCEY 313
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
H VFVG LS S D ++ A + +GR+ + R+V+D+ TG S+GY FV +
Sbjct: 105 HFHVFVGDLSPEISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSF 154
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 50 LGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+ D + D V++ LS T E L MSK+G+V ++ L++D TG SRG+AFV Y
Sbjct: 1 MADQSDVKDEPTKVYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTY 60
Query: 110 ET 111
ET
Sbjct: 61 ET 62
>gi|146093095|ref|XP_001466659.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071022|emb|CAM69702.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 639
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 52 DPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
DPK +FV +L+ +ED +RK +YG + + L+RDI TG S G AFV Y T
Sbjct: 58 DPKG-PRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYST 116
Query: 112 EREMRRA 118
E R A
Sbjct: 117 HDEARAA 123
>gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56526457|emb|CAH81463.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 373
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
YDP + DP T+F+GRLS+ +E L+K YG++K ++++ D RGYAF
Sbjct: 84 YDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKVICD-QNKKPRGYAF 142
Query: 107 VEYETE 112
+E T+
Sbjct: 143 IEEHTK 148
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAFVEY TE
Sbjct: 299 LFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTE 348
>gi|327294751|ref|XP_003232071.1| ribosomal biogenesis protein Gar2 [Trichophyton rubrum CBS 118892]
gi|326466016|gb|EGD91469.1| ribosomal biogenesis protein Gar2 [Trichophyton rubrum CBS 118892]
Length = 499
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAF+E+ +
Sbjct: 231 TVYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFIEFTS 280
>gi|302500344|ref|XP_003012166.1| hypothetical protein ARB_01674 [Arthroderma benhamiae CBS 112371]
gi|291175722|gb|EFE31526.1| hypothetical protein ARB_01674 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TV+VGR+ H ED +R S++G + LRL R+ TG S+ YAF+E+ +
Sbjct: 233 TVYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFIEFTS 282
>gi|256593451|gb|ACV03661.1| Boule isoform a [Myotis ricketti]
gi|256593455|gb|ACV03663.1| Boule isoform a [Rhinolophus ferrumequinum]
Length = 283
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|340518330|gb|EGR48571.1| predicted protein [Trichoderma reesei QM6a]
Length = 240
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
L + P DP GD T+ V RLS+ E L + ++G ++ +R++
Sbjct: 80 LKIEGPKKFKPNEDPNIRGDAFKTLIVARLSYDADERDLEREFGRFGPIERVRVMTHRKK 139
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 140 KPHRGYAFVVFEREKDMRAALDAC 163
>gi|47212475|emb|CAF90271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 30 PHDNAICR-----ALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKY 84
P D CR L C+ A + AI C V+VG + + EDT+R+A + +
Sbjct: 83 PQDGCCCRCRGALTLPCACAQVAAQRQRALAI---MCRVYVGSIYYELGEDTIRQAFAPF 139
Query: 85 GRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
G +K++ + D VT +G+AFVEYE + A E
Sbjct: 140 GPIKSIDMSFDSVTMKHKGFAFVEYEMPEAAQLALE 175
>gi|302917047|ref|XP_003052334.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
gi|256733273|gb|EEU46621.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
Length = 431
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
L+ + LY P DP GD T+ V RLS+ E L K ++G ++ +R++ D
Sbjct: 80 LVTQAPKLYKPNEDPNVRGDAFKTLIVARLSYDADERDLEKEFGRFGPIERIRIIVDTHA 139
Query: 97 ------VTGASRGYAFVEYETEREMR-RAYEVC 122
RGYAFV +E E++MR R + C
Sbjct: 140 HEKPNKKKKPHRGYAFVVFEREKDMRERGPQAC 172
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+EDTLR +KYG V L++++D TG SRG+ F+ +E
Sbjct: 164 CKMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFE 213
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FVG LS F +E++L +A S+YG+V +VRD VT +G+ FV++ + E A E
Sbjct: 37 LFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNARE 94
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAF+EY TE
Sbjct: 290 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTE 339
>gi|46124653|ref|XP_386880.1| hypothetical protein FG06704.1 [Gibberella zeae PH-1]
Length = 393
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
YHP ++ +L+ + Y P D GD T+ V RLS+ E
Sbjct: 56 YHPTESWLQRRDRKKREKKEKLESLVTEAPEHYRPDKDTNIRGDAFKTLIVARLSYEADE 115
Query: 75 DTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
L K ++G ++ +R+V D RGYAFV +E E++MR A + C
Sbjct: 116 KDLEKEFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRAALDSC 171
>gi|340374250|ref|XP_003385651.1| PREDICTED: cleavage stimulation factor subunit 2-like [Amphimedon
queenslandica]
Length = 315
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++FV ++ T+ED +R +S+ G V +L+L++D V+G RG+ F EYE R A
Sbjct: 24 SIFVANIAFETTEDQMRAVLSEVGPVLSLKLIQDPVSGKPRGFGFCEYEDAETARSA 80
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +FV LS T+ + LR+A +++G V + R+V D V+G S+G+ FV Y T E +
Sbjct: 32 DPSPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAK 91
Query: 118 AYE 120
E
Sbjct: 92 GIE 94
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAF 106
Y+P + G+ + T+FV L +E + + +GRVK + LVRD T R Y F
Sbjct: 85 YNPRANKACTGNANNTLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLVRDPKTNEQRSYCF 144
Query: 107 VEYETEREMRRA 118
VEYETE R A
Sbjct: 145 VEYETEAGFRNA 156
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 48 DPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
D +G PK+ TVFVG L+H ++ L K ++ G V +RLVRD VTG +G+ FV
Sbjct: 329 DCVGAPKSQVSEKQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFV 388
Query: 108 EYETEREMRRAYEVCG 123
++ A E+ G
Sbjct: 389 TFKQMDGAALALEMTG 404
>gi|426221302|ref|XP_004004849.1| PREDICTED: protein boule-like isoform 3 [Ovis aries]
Length = 271
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|398018793|ref|XP_003862561.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500791|emb|CBZ35868.1| RNA-binding protein, putative [Leishmania donovani]
Length = 639
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 52 DPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
DPK +FV +L+ +ED +RK +YG + + L+RDI TG S G AFV Y T
Sbjct: 58 DPKG-PRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYST 116
Query: 112 EREMRRA 118
E R A
Sbjct: 117 HDEARAA 123
>gi|157823523|ref|NP_001101927.1| peptidyl-prolyl cis-trans isomerase-like 4 [Rattus norvegicus]
gi|149039530|gb|EDL93692.1| peptidylprolyl isomerase (cyclophilin)-like 4 (predicted) [Rattus
norvegicus]
Length = 357
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +++ ++RD TG
Sbjct: 219 TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +A+
Sbjct: 279 ESLCYAFIEFEKEEDCEKAF 298
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 20 AGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRK 79
A S++G+ I P+ N + R S A L P+ P++ P ++FVG LS T+E L
Sbjct: 141 ALSLNGSQI-PNTNRLFRLNWASGATLSSPI--PQS---PEFSLFVGDLSPSTTEAHLLA 194
Query: 80 AM-SKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+ + VK +R++ D +TG SR + FV + E E RRA
Sbjct: 195 LFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEERRRA 234
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++VG LS T++DTLR+A S +G V + ++RD TG SRG+ FV Y + +E A
Sbjct: 4 AKIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESA 61
>gi|270271227|gb|ACZ67145.1| boule protein transcript variant 2 [Bos taurus]
Length = 271
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|198466884|ref|XP_001354168.2| GA18412 [Drosophila pseudoobscura pseudoobscura]
gi|198149598|gb|EAL31220.2| GA18412 [Drosophila pseudoobscura pseudoobscura]
Length = 190
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 43 SAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASR 102
+ GL PL PK +FVG +S T+E L + S YG VK+ +++ D G S+
Sbjct: 14 AGGLDAPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSK 72
Query: 103 GYAFVEYETEREMRR 117
GY FV +ETE+E +R
Sbjct: 73 GYGFVTFETEQEAQR 87
>gi|156392470|ref|XP_001636071.1| predicted protein [Nematostella vectensis]
gi|156223171|gb|EDO44008.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G + + ++RD TG
Sbjct: 219 AGAQLLEMIGDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E + + RAY
Sbjct: 279 ESLQYAFIEFEKDEDCERAY 298
>gi|355714554|gb|AES05042.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 314
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 130 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 189
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 229 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 284
>gi|340055500|emb|CCC49819.1| putative U1 small nuclear ribonucleoprotein [Trypanosoma vivax
Y486]
Length = 295
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 48 DPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
+P D K DP CTV V L T E+ +R ++GRV ++RL+ D G SR Y FV
Sbjct: 122 EPFTDIKIRSDPWCTVVVSNLHPKTLEEDIRLFCEQFGRVVSVRLIFDF-KGRSRRYGFV 180
Query: 108 EYETEREMRRA 118
E+ E + RRA
Sbjct: 181 EFGREEDARRA 191
>gi|256593453|gb|ACV03662.1| Boule isoform b [Myotis ricketti]
Length = 250
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|395861524|ref|XP_003803032.1| PREDICTED: protein boule-like [Otolemur garnettii]
Length = 295
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
C +F+G L+ T+ED L+ SKYG+V +L+++RD TG SRG+ F+ +
Sbjct: 208 CKMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTF 256
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
P+ D +FVG + + S++G + + +L+ D TG SRG+ F+ Y+T
Sbjct: 284 PREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTP 343
Query: 113 REMRRAYE 120
+ R E
Sbjct: 344 DAVDRVCE 351
>gi|403224363|dbj|BAM42493.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 377
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+F+ ++ +E LR+ + K+G++K L++D +TGAS+GY F EYE R + A
Sbjct: 151 IFIQNVATDVTEAELRELLEKHGKLKLFNLIKDPITGASKGYGFFEYEDSRSAKMA 206
>gi|225698220|gb|ACO07307.1| boule [Bos taurus]
gi|296490441|tpg|DAA32554.1| TPA: boule isoform 1 [Bos taurus]
Length = 295
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|358377877|gb|EHK15560.1| hypothetical protein TRIVIDRAFT_232656 [Trichoderma virens Gv29-8]
Length = 410
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
L+ + P DP GD T+ V RLS+ E L + ++G ++ +R++ D
Sbjct: 80 LVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYEADERDLEREFGRFGPIERIRIIVDTHA 139
Query: 97 ------VTGASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 140 HEKPNKKKKPHRGYAFVVFEREKDMRAALDAC 171
>gi|145497477|ref|XP_001434727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401855|emb|CAK67330.1| unnamed protein product [Paramecium tetraurelia]
Length = 686
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 50 LGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
LGD P A + P ++V +L+ T E L SK+G +KN +VRD TG+S YAF+
Sbjct: 212 LGDLPDADMKPPENVLYVCKLNPITEEKDLEVIFSKFGLIKNCEVVRDWKTGSSLQYAFI 271
Query: 108 EYETEREMRRAY 119
E+ET AY
Sbjct: 272 EFETIAACEEAY 283
>gi|13539605|emb|CAC35733.1| cyclophilin-RNA interacting protein [Paramecium tetraurelia]
Length = 695
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 50 LGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
LGD P A + P ++V +L+ T E L SK+G +KN +VRD TG+S YAF+
Sbjct: 212 LGDLPDADMKPPENVLYVCKLNPITEEKDLEVIFSKFGLIKNCEVVRDWKTGSSLQYAFI 271
Query: 108 EYETEREMRRAY 119
E+ET AY
Sbjct: 272 EFETIAACEEAY 283
>gi|426221298|ref|XP_004004847.1| PREDICTED: protein boule-like isoform 1 [Ovis aries]
Length = 295
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|386812367|ref|ZP_10099592.1| RNA-binding protein [planctomycete KSU-1]
gi|386404637|dbj|GAB62473.1| RNA-binding protein [planctomycete KSU-1]
Length = 115
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++VG L H SED LR+A +G+V + +++DI +G S+G+ FVE + E + A
Sbjct: 1 MNIYVGNLPHDVSEDDLRQAFEVFGKVTSATVIKDIFSGTSKGFGFVEMPAKAEAQAA 58
>gi|194211413|ref|XP_001495211.2| PREDICTED: nucleolin [Equus caballus]
Length = 705
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
L P G P A P T+FV LS T+E+TL+++ R R+V D TG+S+G+
Sbjct: 552 LQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSIRA---RIVTDRETGSSKGFG 608
Query: 106 FVEYETEREMRRAYE 120
FV++ +E + + A E
Sbjct: 609 FVDFNSEEDAKAAKE 623
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAF+EY TE
Sbjct: 318 LFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYSTE 367
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS TL++A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVS 143
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 144 FVKKSEAEAA 153
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+CTV+ G ++ ++D + K S +G ++++R+ +D +GYAF+++ T+ A
Sbjct: 205 NCTVYCGGFTNGITDDLITKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAI 258
Query: 120 E 120
E
Sbjct: 259 E 259
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 42 SSAGLYDPLGDPKAIGD----PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIV 97
+SA DP KA GD P +FVG +S +ED L + ++YG VK++RL D
Sbjct: 397 TSAKPADPERRAKAFGDSTSAPSSVLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRD 456
Query: 98 TGASRGYAFVEYETEREMRRAYE 120
T +GY +VE+ ++A+E
Sbjct: 457 TQRLKGYGYVEFVDVESAKKAFE 479
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
TVFVGRLS D L + + G V + R+ D TG SRG+ FVE+ T
Sbjct: 322 TVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFAT 371
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS TL++A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVS 143
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 144 FVKKSEAEAA 153
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+CTV+ G ++ +++ + K S +G ++++R+ +D +GYAF+++ T+ A
Sbjct: 205 NCTVYCGGFTNGITDELINKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAI 258
Query: 120 E 120
E
Sbjct: 259 E 259
>gi|256085907|ref|XP_002579151.1| peptidyl-prolyl cis-trans isomerase [Schistosoma mansoni]
Length = 730
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 50 LGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
+GD P A + P+ +FV +L+ T+ + L S++G +K+ ++RD TGAS YAF+
Sbjct: 226 IGDLPDANVKPPNNVLFVCKLNPVTTSEDLGIIFSRFGEIKSCEVIRDKRTGASLQYAFI 285
Query: 108 EYETEREMRRAY 119
EYE E + AY
Sbjct: 286 EYEKEADCEDAY 297
>gi|183229788|ref|XP_001913374.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|169803196|gb|EDS89871.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 372
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Query: 50 LGDP----KAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYA 105
+GDP KA +P+ T+ V RL T E L++ S+YG +K + +++D+ G ++GYA
Sbjct: 8 IGDPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKDL-KGINKGYA 66
Query: 106 FVEY----ETEREMRRA 118
FVEY E ER RRA
Sbjct: 67 FVEYNHRSEAERACRRA 83
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETER 113
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAF+EY TE
Sbjct: 297 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEE 347
>gi|449277846|gb|EMC85868.1| Peptidyl-prolyl cis-trans isomerase-like 4, partial [Columba livia]
Length = 478
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 217 TRAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTG 276
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +AY
Sbjct: 277 ESLCYAFIEFEKEEDCEKAY 296
>gi|154341070|ref|XP_001566488.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063811|emb|CAM40000.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 619
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 52 DPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
DPK +FV +L+ +ED +R+ +YG + + L+RDI TG S G AFV Y T
Sbjct: 59 DPKG-PRSQTNLFVRKLASAVTEDDMRRLFGQYGTIISFALMRDIYTGESLGTAFVRYST 117
Query: 112 EREMRRA 118
E R A
Sbjct: 118 HEEARSA 124
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETER 113
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAF+EY TE
Sbjct: 267 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEE 317
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETER 113
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAFVEY TE
Sbjct: 301 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEE 351
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
HC +F+G +S TSE+ LR SKYG V +++D +TG +RG+ FV
Sbjct: 5 HCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFV 52
>gi|154982967|gb|ABS89140.1| boule [Bos taurus]
Length = 293
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|345797638|ref|XP_545580.3| PREDICTED: protein boule-like isoform 2 [Canis lupus familiaris]
Length = 295
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+FVG LS T+E++L +A +KYG + + ++RD TG SRG+ FV+Y+ + + A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
>gi|256593459|gb|ACV03665.1| Boule isoform a [Rousettus leschenaultii]
Length = 283
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 88
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+ +FVG LS T+E+TL+K YGRV + ++RD TG RG+ FV +E E RA
Sbjct: 49 NSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRA 107
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ P +FVG L +E+ + + G V ++ D TG SRG+ FV + +E +
Sbjct: 136 VTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMV 195
Query: 116 RRAYE 120
+ +E
Sbjct: 196 EKVFE 200
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVT 98
L S + P + D VFVG L ++ +ED +++ +S +G ++ LV+D T
Sbjct: 257 LFAESQATHIPGVVSTVVSDTINKVFVGGLPNYLNEDQVKELLSTFGELRAFNLVKDSAT 316
Query: 99 GASRGYAFVEY 109
G S+GYAF EY
Sbjct: 317 GLSKGYAFCEY 327
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+F+G LS T+ED+L A KYG ++ + ++RD TG SRG+ FV+Y+ + + A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDA 62
Query: 119 YEVC 122
+
Sbjct: 63 LDAM 66
>gi|215697937|dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
DP +F+ LS T+ D L++A +K+G V + R+V D VTG S+G+ FV Y T + +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAK 92
Query: 118 AYE 120
E
Sbjct: 93 GIE 95
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 15 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 74
Query: 120 EVCG 123
+ G
Sbjct: 75 QQMG 78
>gi|91089021|ref|XP_968771.1| PREDICTED: similar to CG5808 CG5808-PA [Tribolium castaneum]
gi|270011537|gb|EFA07985.1| hypothetical protein TcasGA2_TC005570 [Tribolium castaneum]
Length = 467
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 44 AGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS 101
A + + +GD P A + P +FV +L+ TS+D L S++G++K+ ++RD TG S
Sbjct: 221 ATILEMVGDIPDAEMAPPENVLFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKTGDS 280
Query: 102 RGYAFVEYETEREMRRAY 119
YAFVE+E ++ AY
Sbjct: 281 LQYAFVEFEDKKSCEDAY 298
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
A D FVG L+ T++ +L +A S+YG + +++ D TG SRG+ FV ++ E+
Sbjct: 2 ASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQS 61
Query: 115 MRRAYE 120
MR A E
Sbjct: 62 MRDAIE 67
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 22 SIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAM 81
+++G +H + + A +S+G D G H +FVG LS+ ++D L +A
Sbjct: 127 TLNGRRVHQSEIRVNWAYQANSSGKEDTSG--------HFHIFVGDLSNEVNDDILTQAF 178
Query: 82 SKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
S +G V R++ D+ TG SRGY FV + E +A
Sbjct: 179 SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKA 215
>gi|344302784|gb|EGW33058.1| hypothetical protein SPAPADRAFT_60375 [Spathaspora passalidarum
NRRL Y-27907]
Length = 302
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+ DP+ TVF+ RL + +E + A SKYG ++++R++RD G SRGY F+ +E
Sbjct: 106 MKDPYRTVFIARLDYSVTELDISSAFSKYGVIESIRIIRD-KNGKSRGYGFIVFE 159
>gi|328704296|ref|XP_001948399.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 572
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S ED++++A S +G +K++ + D +T +GYAFVEYE + A E
Sbjct: 107 CRVYVGNISFELKEDSIKQAFSPFGFIKSIDMSWDPITRKHKGYAFVEYEIPEAAQLALE 166
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ D FVG L+ T + +L+ A SKYG V + +++ D TG SRG+ FV + ++ M
Sbjct: 1 MADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAM 60
Query: 116 RRAYE 120
R+A E
Sbjct: 61 RQAIE 65
>gi|193787270|dbj|BAG52476.1| unnamed protein product [Homo sapiens]
Length = 368
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +++ ++RD TG
Sbjct: 219 TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +A+
Sbjct: 279 ESLCYAFIEFEKEEDCEKAF 298
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ D FVG L+ T + +L+ A SKYG V + +++ D TG SRG+ FV + ++ M
Sbjct: 1 MADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAM 60
Query: 116 RRAYE 120
R+A E
Sbjct: 61 RQAIE 65
>gi|67465896|ref|XP_649106.1| enhancer binding protein-2 [Entamoeba histolytica HM-1:IMSS]
gi|56465462|gb|EAL43716.1| enhancer binding protein-2, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704892|gb|EMD45051.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 229
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++G LS+ T+E+ L+ +G++K +L+ I G SRG+AFVEYETE + ++A
Sbjct: 2 TKLYIGNLSYKTTEENLKTHFESFGKIKEAKLM--IFRGYSRGFAFVEYETEEDAKKAVA 59
Query: 121 VCG 123
G
Sbjct: 60 ANG 62
>gi|401415854|ref|XP_003872422.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488646|emb|CBZ23893.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 638
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 52 DPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
DPK +FV +L+ +ED +RK +YG + + L+RDI TG S G AFV Y T
Sbjct: 57 DPKG-PRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYST 115
Query: 112 EREMRRA 118
E R A
Sbjct: 116 HDEARAA 122
>gi|256593461|gb|ACV03666.1| Boule isoform b [Rousettus leschenaultii]
Length = 250
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 88
>gi|168016855|ref|XP_001760964.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687973|gb|EDQ74353.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 388
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + +GD P+A + P +FV +L+ T E L ++G+VK+ ++RD TG
Sbjct: 219 SRAVVLEMIGDLPEADMKPPENVLFVCKLNPVTEEGDLELIFGRFGKVKSADIIRDYKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+ETE AY
Sbjct: 279 DSLCYAFIEFETEEACEAAY 298
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
P A+ H VFVG LS + + ++ A + +G++ + R+V+D+ TG S+GY FV + +
Sbjct: 100 PNALISDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 159
Query: 113 REMRRA 118
+ A
Sbjct: 160 LDAENA 165
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 77 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 136
Query: 120 EVCG 123
+ G
Sbjct: 137 QQMG 140
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
+F+G LS T+E++L +A KYG ++ + ++RD TG SRG+ FV+YE+
Sbjct: 4 EGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYES 55
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 120 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 120 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 120 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 136 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 195
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 120 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 179
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 73 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 132
>gi|308487674|ref|XP_003106032.1| CRE-RNP-4 protein [Caenorhabditis remanei]
gi|308254606|gb|EFO98558.1| CRE-RNP-4 protein [Caenorhabditis remanei]
Length = 142
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
VFV + +ED + S+YG++KN+ L D TG +GYA VEYET++E A E
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIE 114
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 90 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 149
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R+A +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 38 CRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALE 97
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 72 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 131
Query: 120 EVCG 123
+ G
Sbjct: 132 QQMG 135
>gi|301769293|ref|XP_002920065.1| PREDICTED: protein boule-like [Ailuropoda melanoleuca]
Length = 295
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 100
>gi|332031346|gb|EGI70859.1| Protein boule [Acromyrmex echinatior]
Length = 864
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG +S TSE L + S YG VK +++ D G S+GY FV +ETE E +R
Sbjct: 129 IFVGGISASTSEAELAQVFSAYGNVKATKIISDRA-GVSKGYGFVTFETEEEAKR 182
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS S D +R A + +G++ + R+V+D+ TG S+GY F+ + + + A
Sbjct: 96 HFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAI 155
Query: 120 E 120
+
Sbjct: 156 Q 156
>gi|449680331|ref|XP_002158219.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 259
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 55 AIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+ D VFVG L ++ +ED +++ +S +G +++ LV+D TG S+GYAF EY
Sbjct: 52 VVSDTINKVFVGGLPNYLNEDQVKELLSTFGDLRSFNLVKDSATGLSKGYAFCEY 106
>gi|256593447|gb|ACV03659.1| Boule isoform a [Eonycteris spelaea]
Length = 273
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++ +
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQKILQ 91
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 43 SAGLYDPLGDPKAIGDPH-------CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD 95
+ G DPL +++ C V+VG + + EDT+R+A + +G +K++ + D
Sbjct: 67 TMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD 126
Query: 96 IVTGASRGYAFVEYETEREMRRAYE 120
VT +G+AFVEYE + A E
Sbjct: 127 SVTLKHKGFAFVEYEVPEAAQLALE 151
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +GR+K+ L RD TG +GY F+EY+ + + A
Sbjct: 191 IYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGFIEYDKAQSAQDA 246
>gi|134025329|gb|AAI35084.1| LOC562370 protein [Danio rerio]
Length = 379
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 43 SAGLYDPLGDPKAIGDPH-------CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD 95
+ G DPL +++ C V+VG + + EDT+R+A + +G +K++ + D
Sbjct: 67 TMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD 126
Query: 96 IVTGASRGYAFVEYETEREMRRAYE 120
VT +G+AFVEYE + A E
Sbjct: 127 SVTLKHKGFAFVEYEVPEAAQLALE 151
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +GR+K+ L RD TG +GY F+EY+ + + A
Sbjct: 191 IYVASVHPDLSDDDIKSVFEAFGRIKSCSLARDPTTGKHKGYGFIEYDKAQSAQDA 246
>gi|449495396|ref|XP_002188522.2| PREDICTED: poly(U)-binding-splicing factor PUF60 [Taeniopygia
guttata]
Length = 514
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 92 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 151
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 191 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 246
>gi|440911935|gb|ELR61552.1| Poly(U)-binding-splicing factor PUF60, partial [Bos grunniens
mutus]
Length = 561
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 124 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 183
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 223 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 278
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 71 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 130
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 170 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 225
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 83 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 142
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 182 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 237
>gi|296480748|tpg|DAA22863.1| TPA: poly(U)-binding-splicing factor PUF60 [Bos taurus]
Length = 530
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 100 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 159
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 254
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 100 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 159
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 254
>gi|257196183|ref|NP_082640.2| poly(U)-binding-splicing factor PUF60 isoform a [Mus musculus]
gi|158563798|sp|Q3UEB3.2|PUF60_MOUSE RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|158563997|sp|Q9WV25.2|PUF60_RAT RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=RNA-binding protein Siah-BP; AltName:
Full=Siah-binding protein 1
gi|148697573|gb|EDL29520.1| RIKEN cDNA 2410104I19, isoform CRA_a [Mus musculus]
gi|149066142|gb|EDM16015.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_a [Rattus norvegicus]
Length = 564
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 134 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 193
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 233 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 288
>gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]
Length = 541
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 111 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 170
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 265
>gi|73974710|ref|XP_857040.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Canis
lupus familiaris]
Length = 543
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 113 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 172
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 212 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 267
>gi|417402731|gb|JAA48201.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 558
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 128 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 187
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 282
>gi|417402525|gb|JAA48108.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 541
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 111 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 170
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 265
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 72 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 131
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 171 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 226
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 223
>gi|410042304|ref|XP_003951412.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 530
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 100 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 159
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 254
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 83 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 142
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 182 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 237
>gi|410042300|ref|XP_003951410.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 516
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 223
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|402794180|ref|NP_001258028.1| poly(U)-binding-splicing factor PUF60 isoform g [Homo sapiens]
gi|426360971|ref|XP_004047701.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Gorilla
gorilla gorilla]
gi|441648312|ref|XP_003280819.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Nomascus leucogenys]
Length = 530
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 100 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 159
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 199 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 254
>gi|395860114|ref|XP_003802360.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Otolemur garnettii]
Length = 542
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 171
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 266
>gi|395860112|ref|XP_003802359.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Otolemur garnettii]
Length = 558
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 128 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 187
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 282
>gi|395512680|ref|XP_003760563.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Sarcophilus
harrisii]
Length = 553
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 123 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 182
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 222 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 277
>gi|390475872|ref|XP_002759200.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Callithrix jacchus]
Length = 563
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 133 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 192
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 232 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 287
>gi|448089233|ref|XP_004196749.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|448093471|ref|XP_004197780.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359378171|emb|CCE84430.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359379202|emb|CCE83399.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ DP+ TVF+ RL + +E + K +SKYG + ++R++RD G SRGY FV +E E +
Sbjct: 109 MKDPYKTVFLARLDYSLTELDISKHVSKYGVIDSIRIIRD-REGRSRGYGFVAFERESDA 167
Query: 116 R 116
+
Sbjct: 168 K 168
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 130 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 189
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 229 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 284
>gi|355780002|gb|EHH64478.1| 60 kDa poly(U)-binding-splicing factor [Macaca fascicularis]
Length = 521
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 171
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 266
>gi|355698276|gb|EHH28824.1| 60 kDa poly(U)-binding-splicing factor [Macaca mulatta]
Length = 568
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 138 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 197
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 237 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 292
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 152 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 211
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 251 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 306
>gi|351698432|gb|EHB01351.1| Poly(U)-binding-splicing factor PUF60, partial [Heterocephalus
glaber]
Length = 556
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 126 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 185
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 225 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 280
>gi|348555826|ref|XP_003463724.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Cavia porcellus]
Length = 564
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 131 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 190
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 230 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 285
>gi|345315810|ref|XP_001511498.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like
[Ornithorhynchus anatinus]
Length = 499
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 100 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 159
>gi|338728501|ref|XP_001496155.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Equus caballus]
Length = 499
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 223
>gi|338728499|ref|XP_003365686.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Equus caballus]
Length = 516
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|332831344|ref|XP_003312009.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
troglodytes]
Length = 542
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 171
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 266
>gi|332831342|ref|XP_528257.3| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
troglodytes]
Length = 559
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 129 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 188
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 283
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS TL++A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 144 FVKKSEAEAA 153
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+CTV+ G ++ +++ ++K S +G ++++R+ +D +GYAF+++ T+ A
Sbjct: 205 NCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAI 258
Query: 120 E 120
E
Sbjct: 259 E 259
>gi|327290985|ref|XP_003230202.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Anolis
carolinensis]
Length = 541
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 108 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 167
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 207 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 262
>gi|326918217|ref|XP_003205387.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Meleagris
gallopavo]
Length = 516
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|326915720|ref|XP_003204161.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Meleagris gallopavo]
Length = 481
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A + P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 222 TRAILLEMVGDLPDAEVKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTG 281
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +AY
Sbjct: 282 ESLCYAFIEFEKEEDCEKAY 301
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 138 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 197
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 237 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 292
>gi|297300235|ref|XP_001087851.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 5 [Macaca
mulatta]
Length = 542
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 171
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 266
>gi|297300233|ref|XP_001087975.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Macaca
mulatta]
Length = 559
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 129 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 188
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 283
>gi|300798352|ref|NP_001178809.1| poly(U)-binding-splicing factor PUF60 [Rattus norvegicus]
Length = 563
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 133 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 192
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 232 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 287
>gi|281341440|gb|EFB17024.1| hypothetical protein PANDA_011097 [Ailuropoda melanoleuca]
Length = 512
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|187607191|ref|NP_001120082.1| poly-U binding splicing factor 60KDa [Xenopus (Silurana)
tropicalis]
gi|165971204|gb|AAI58522.1| LOC100145091 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 77 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 136
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
++V + S++ ++ +G++K+ L RD TG +GY F+EYE
Sbjct: 176 IYVASVHQDLSDEDIKSVFEAFGKIKSCMLARDPTTGKHKGYGFIEYE 223
>gi|380810662|gb|AFE77206.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
gi|383416607|gb|AFH31517.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
Length = 560
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 130 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 189
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 229 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 284
>gi|380810660|gb|AFE77205.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
gi|383416605|gb|AFH31516.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
Length = 543
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 113 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 172
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 212 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 267
>gi|148697575|gb|EDL29522.1| RIKEN cDNA 2410104I19, isoform CRA_c [Mus musculus]
Length = 546
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 116 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 175
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 215 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 270
>gi|148697576|gb|EDL29523.1| RIKEN cDNA 2410104I19, isoform CRA_d [Mus musculus]
Length = 553
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 123 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 182
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 222 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 277
>gi|126323028|ref|XP_001370705.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Monodelphis
domestica]
Length = 637
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 207 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 266
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 306 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 361
>gi|402794118|ref|NP_001258025.1| poly(U)-binding-splicing factor PUF60 isoform d [Homo sapiens]
gi|119602600|gb|EAW82194.1| fuse-binding protein-interacting repressor, isoform CRA_k [Homo
sapiens]
Length = 541
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 111 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 170
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 265
>gi|402794155|ref|NP_001258027.1| poly(U)-binding-splicing factor PUF60 isoform f [Homo sapiens]
gi|119602601|gb|EAW82195.1| fuse-binding protein-interacting repressor, isoform CRA_l [Homo
sapiens]
Length = 558
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 128 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 187
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 282
>gi|118088352|ref|XP_419663.2| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 4 [Gallus
gallus]
Length = 478
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A + P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 219 TRAILLEMVGDLPDAEVKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +AY
Sbjct: 279 ESLCYAFIEFEKEEDCEKAY 298
>gi|197100546|ref|NP_001127017.1| poly(U)-binding-splicing factor PUF60 [Pongo abelii]
gi|75040908|sp|Q5R469.1|PUF60_PONAB RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|55733539|emb|CAH93447.1| hypothetical protein [Pongo abelii]
Length = 558
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 128 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 187
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 227 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 282
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 83 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 142
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 182 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 237
>gi|209862867|ref|NP_001129505.1| poly(U)-binding-splicing factor PUF60 isoform c [Homo sapiens]
gi|109087696|ref|XP_001087604.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 3 [Macaca
mulatta]
gi|441648305|ref|XP_004090875.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|15030041|gb|AAH11265.1| PUF60 protein [Homo sapiens]
gi|15080471|gb|AAH11979.1| PUF60 protein [Homo sapiens]
gi|119602595|gb|EAW82189.1| fuse-binding protein-interacting repressor, isoform CRA_f [Homo
sapiens]
Length = 516
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 86 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 145
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 240
>gi|402794208|ref|NP_001258029.1| poly(U)-binding-splicing factor PUF60 isoform h [Homo sapiens]
gi|109087698|ref|XP_001087484.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Macaca
mulatta]
gi|332263566|ref|XP_003280822.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 4
[Nomascus leucogenys]
gi|16307289|gb|AAH09734.1| PUF60 protein [Homo sapiens]
gi|119602596|gb|EAW82190.1| fuse-binding protein-interacting repressor, isoform CRA_g [Homo
sapiens]
gi|261859062|dbj|BAI46053.1| poly-U binding splicing factor 60KDa [synthetic construct]
Length = 499
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 223
>gi|257196186|ref|NP_001158072.1| poly(U)-binding-splicing factor PUF60 isoform c [Mus musculus]
gi|14714891|gb|AAH10601.1| Puf60 protein [Mus musculus]
Length = 499
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 223
>gi|17298690|ref|NP_055096.2| poly(U)-binding-splicing factor PUF60 isoform b [Homo sapiens]
gi|397497390|ref|XP_003819494.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
paniscus]
gi|402879354|ref|XP_003903308.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Papio
anubis]
gi|441648302|ref|XP_004090874.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|17152040|gb|AAF27522.2|AF217197_1 FBP-interacting repressor [Homo sapiens]
gi|14250810|gb|AAH08875.1| Poly-U binding splicing factor 60KDa [Homo sapiens]
gi|119602594|gb|EAW82188.1| fuse-binding protein-interacting repressor, isoform CRA_e [Homo
sapiens]
gi|410220382|gb|JAA07410.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303416|gb|JAA30308.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 542
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 112 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 171
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 266
>gi|76677895|ref|NP_598452.2| poly(U)-binding-splicing factor PUF60 isoform b [Mus musculus]
gi|74195824|dbj|BAE30474.1| unnamed protein product [Mus musculus]
gi|74221976|dbj|BAE40622.1| unnamed protein product [Mus musculus]
gi|148697574|gb|EDL29521.1| RIKEN cDNA 2410104I19, isoform CRA_b [Mus musculus]
gi|149066143|gb|EDM16016.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_b [Rattus norvegicus]
Length = 547
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 117 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 176
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 216 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 271
>gi|6176532|gb|AAF05605.1|AF190744_1 poly-U binding splicing factor PUF60 [Homo sapiens]
Length = 556
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 126 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 185
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 225 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 280
>gi|17978512|ref|NP_510965.1| poly(U)-binding-splicing factor PUF60 isoform a [Homo sapiens]
gi|397497388|ref|XP_003819493.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
paniscus]
gi|402879352|ref|XP_003903307.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Papio
anubis]
gi|441648299|ref|XP_004090873.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|74761960|sp|Q9UHX1.1|PUF60_HUMAN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=FUSE-binding protein-interacting repressor;
Short=FBP-interacting repressor; AltName:
Full=Ro-binding protein 1; Short=RoBP1; AltName:
Full=Siah-binding protein 1; Short=Siah-BP1
gi|6684440|gb|AAF23589.1|AF114818_1 Ro ribonucleoprotein-binding protein 1 [Homo sapiens]
gi|48146403|emb|CAG33424.1| SIAHBP1 [Homo sapiens]
gi|119602593|gb|EAW82187.1| fuse-binding protein-interacting repressor, isoform CRA_d [Homo
sapiens]
gi|158258178|dbj|BAF85062.1| unnamed protein product [Homo sapiens]
gi|410220384|gb|JAA07411.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303418|gb|JAA30309.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 559
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 129 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 188
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 283
>gi|400597493|gb|EJP65226.1| U1 small nuclear ribonucleoprotein [Beauveria bassiana ARSEF 2860]
Length = 400
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGAS----- 101
Y P DP GD T+ V RLS+ E L + ++G ++ R+V D
Sbjct: 88 YKPNEDPLIRGDAFKTLIVARLSYEADERDLEREFGRFGPIERTRIVVDTHAAEKGNKKK 147
Query: 102 ---RGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 148 KPHRGYAFVVFEREKDMRAALDAC 171
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
P A+ H VFVG LS + + ++ A + +G++ + R+V+D+ TG S+GY FV + +
Sbjct: 100 PNALISDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 159
Query: 113 REMRRA 118
+ A
Sbjct: 160 LDAENA 165
>gi|387593844|gb|EIJ88868.1| hypothetical protein NEQG_00687 [Nematocida parisii ERTm3]
gi|387595148|gb|EIJ92774.1| hypothetical protein NEPG_02465 [Nematocida parisii ERTm1]
Length = 211
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
+G+ CTVFVG + E+T+ + +S GRV + R+V D TG S+GY F YE+
Sbjct: 1 MGNRGCTVFVGNIDFTIPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYES 56
>gi|303324711|pdb|2KXF|A Chain A, Solution Structure Of The First Two Rrm Domains Of
Fbp-Interacting Repressor (Fir)
gi|303324712|pdb|2KXH|A Chain A, Solution Structure Of The First Two Rrm Domains Of Fir In
The Complex With Fbp Nbox Peptide
Length = 199
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 14 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 73
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 113 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 168
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS TL++A + +G + N R+VRD T S+GYAFV
Sbjct: 156 PGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVS 215
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 216 FVKKSEAEAA 225
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETER 113
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAF+EY TE
Sbjct: 225 LFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 275
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
H VFVG LS + D +R A + +G++ + R+V+D+ TG S+GY FV + + + A
Sbjct: 95 HFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENA 153
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T + +L +A S YG+V +++ D TG SRG+ FV + +E+ MR A E
Sbjct: 10 FVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 66
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 85 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 144
Query: 120 EVCG 123
+ G
Sbjct: 145 QQMG 148
>gi|344236628|gb|EGV92731.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 271
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 223
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+VFVG +S+ SEDT+R SK G V ++++V D TG +GY F+E+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS LR+A +G V + +++RD T S+GY FV Y E RA
Sbjct: 132 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 191
Query: 120 E 120
E
Sbjct: 192 E 192
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+V+VG +++ SED +R+A + YGR+ +R+ + +GYAFV+++ + +A
Sbjct: 240 SVYVGNIANL-SEDEIRQAFASYGRISEVRIFK------MQGYAFVKFDNKDAAAKA 289
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
P PK H +FVG LS TL++A + +G + N R+VRD T S+GYAFV
Sbjct: 84 PGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVS 143
Query: 109 YETEREMRRA 118
+ + E A
Sbjct: 144 FVKKSEAEAA 153
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
+CTV+ G ++ +++ ++K S +G ++++R+ +D +GYAF+++ T+ A
Sbjct: 205 NCTVYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAI 258
Query: 120 E 120
E
Sbjct: 259 E 259
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 39/57 (68%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T++++L +A S++G + + +++ D TG SRG+ FV ++ E+ MR A E
Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 65
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 19 QAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLR 78
Q IDG I+ D R +S GD ++ P T+FVG LS E+ L
Sbjct: 315 QGAEIDGRPIN-LDFTTARQNNNNSQDRARKFGDSES--PPSDTLFVGNLSFNADEEALG 371
Query: 79 KAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY------EVCG 123
AMS++G V ++R+ D TG +G+A+V + T E ++A+ +VCG
Sbjct: 372 AAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAHAAMNGQQVCG 422
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
T+FVG+LS ED LR+ V+N R+V D S+G +V++ T + +A
Sbjct: 254 TLFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRADAEKA 310
>gi|255641298|gb|ACU20926.1| unknown [Glycine max]
gi|255642525|gb|ACU21526.1| unknown [Glycine max]
Length = 213
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 33 NAICRALLCSSAGLYDPLGDPKAIGDPH----CTVFVGRLSHFTSEDTLRKAMSKYGRVK 88
+A R + LYD G GDP +FVGRL + D LR+ ++GR+
Sbjct: 48 SAATRYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSDDLRQYFGRFGRIL 107
Query: 89 NLRLVRDIVTGASRGYAFVEYE----TEREMRRAYEVCG 123
++ + RD RG+ FV + +R RR++E+CG
Sbjct: 108 DVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICG 146
>gi|5524727|gb|AAD44358.1|AF165892_1 RNA-binding protein SiahBP [Rattus norvegicus]
Length = 565
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 135 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 194
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 234 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 289
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 69 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 128
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
++V + S+D ++ +G++K+ L R+ TG +G+ F+EYE
Sbjct: 168 IYVASIHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGKHKGFGFIEYE 215
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYEVC 122
+F+G L+ T E LR A S +G + +R+++D TG SRG+ FV Y T++E ++A E
Sbjct: 39 LFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAM 98
>gi|360044158|emb|CCD81705.1| peptidyl-prolyl cis-trans isomerase-like 4. ppil4 [Schistosoma
mansoni]
Length = 436
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 50 LGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
+GD P A + P+ +FV +L+ T+ + L S++G +K+ ++RD TGAS YAF+
Sbjct: 226 IGDLPDANVKPPNNVLFVCKLNPVTTSEDLGIIFSRFGEIKSCEVIRDKRTGASLQYAFI 285
Query: 108 EYETEREMRRAY 119
EYE E + AY
Sbjct: 286 EYEKEADCEDAY 297
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAF+EY TE
Sbjct: 319 LFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTE 368
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
++V LS T+EDTLR ++G++ ++ LV D V RG+AF+ YETE E +A +
Sbjct: 79 LYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQ 136
>gi|403223125|dbj|BAM41256.1| peptidyl-prolyl cis-trans isomerase [Theileria orientalis strain
Shintoku]
Length = 357
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
S A + + LGD P A I P +FV +L+ T E L+ S++G VK +++D VTG
Sbjct: 32 SRAVVLEILGDIPDADITPPKNVLFVCKLNPVTEEGDLKIIFSRFGNVKKCDIIKDYVTG 91
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+ETE AY
Sbjct: 92 DSLQYAFIEFETEASCNEAY 111
>gi|322797544|gb|EFZ19588.1| hypothetical protein SINV_06536 [Solenopsis invicta]
Length = 223
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
VFVG +S TSE L + S +G VK +++ D G S+GY FV +ETE E +R
Sbjct: 14 VFVGGISASTSEAELAQVFSAFGNVKATKIISD-RAGVSKGYGFVTFETEEEAKR 67
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
++VG LS+ +ED LR+A + YG + N+ ++RD TG S+G+ FVE
Sbjct: 1 MNIYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVE 48
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
I C +F+G L+ T+ED LR +KYG V L++++D TG SRG+ F+ +E
Sbjct: 192 ISKDSCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFE 246
>gi|170053756|ref|XP_001862821.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
gi|167874130|gb|EDS37513.1| splicing factor U2AF 50 kDa subunit [Culex quinquefasciatus]
Length = 382
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH +F+G L ++ +ED +++ + +G++K LV+D TG S+GYAF EY
Sbjct: 244 PH-KIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAEY 293
>gi|403377312|gb|EJY88648.1| Heterogeneous nuclear ribonucleoprotein A1 [Oxytricha trifallax]
Length = 669
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
VFVG L + +++ R +YG VK+ ++VR+ TGASRG+ F+ Y +R +R
Sbjct: 409 VFVGGLDYQLTDEAFRAHFQQYGEVKDAQIVREPTTGASRGFGFITYFDDRVSKR 463
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 45 GLYDPLGDPKAIGDPH--CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASR 102
G+ + L P+ I + F+G + + E + K +YG V ++ ++RD TG SR
Sbjct: 230 GIQNQLNQPQQIQEEEHFSKYFIGGILYTAKESDIEKYFRQYGHVVDVAIMRDKHTGKSR 289
Query: 103 GYAFVEY-ETEREMRRAYEV 121
G+AFV + E E R EV
Sbjct: 290 GFAFVTFKENNMESNRIIEV 309
>gi|348555193|ref|XP_003463408.1| PREDICTED: protein boule-like [Cavia porcellus]
Length = 322
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 74 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 127
>gi|49609417|emb|CAG34241.1| BOULE protein [Microcebus murinus]
Length = 283
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 88
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 148 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 207
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L RD TG +GY F+EYE + + A
Sbjct: 247 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA 302
>gi|358391969|gb|EHK41373.1| hypothetical protein TRIATDRAFT_176911, partial [Trichoderma
atroviride IMI 206040]
Length = 392
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
L+ + P DP GD T+ V RLS+ E L + ++G ++ +R++ D
Sbjct: 80 LVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYDAEERDLEREFGRFGPIERIRIIVDTHA 139
Query: 97 ------VTGASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 140 HEKPNKKKKPHRGYAFVVFEREKDMRAALDAC 171
>gi|224129796|ref|XP_002320673.1| predicted protein [Populus trichocarpa]
gi|222861446|gb|EEE98988.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY----ETEREMRRA 118
+FVG + TSEDTLR SKYG V +L + +D +T RG+AFV + R ++ +
Sbjct: 8 LFVGGIPRGTSEDTLRDHFSKYGVVSHLLVAKDQITKLPRGFAFVVFSEAASAARALQDS 67
Query: 119 YEVCG 123
+ +CG
Sbjct: 68 HVICG 72
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T++ TL A S+YG + + +++ D TG SRG+ FV ++ E+ MR A E
Sbjct: 9 FVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIE 65
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
H VFVG LS + D +R A + +G++ + R+V+D+ TG S+GY FV + + + A
Sbjct: 95 HFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENA 153
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
V+VG LS T++D+LR+A S+YG V + ++RD TG SRG+ FV Y E
Sbjct: 3 AKVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEE 56
>gi|256593457|gb|ACV03664.1| Boule isoform b [Rhinolophus ferrumequinum]
Length = 95
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++ +
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQKILQ 91
>gi|170054347|ref|XP_001863087.1| splicing factor u2af large subunit [Culex quinquefasciatus]
gi|167874693|gb|EDS38076.1| splicing factor u2af large subunit [Culex quinquefasciatus]
Length = 438
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH +F+G L ++ +ED +++ + +G++K LV+D TG S+GYAF EY
Sbjct: 230 PH-KIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAEY 279
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH +F+G L ++ +ED +++ +S +G ++ LV+D TG S+GYAF EY
Sbjct: 115 PH-KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEY 164
>gi|157132061|ref|XP_001662443.1| splicing factor u2af large subunit [Aedes aegypti]
gi|108881728|gb|EAT45953.1| AAEL002818-PA [Aedes aegypti]
Length = 418
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH +F+G L ++ +ED +++ + +G++K LV+D TG S+GYAF EY
Sbjct: 210 PH-KIFIGGLPNYLNEDQVKELLLSFGQLKAFNLVKDAATGLSKGYAFAEY 259
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+P T+FVG ++ ED L + + YG V+++RL D TG +G+A+VE+E +
Sbjct: 384 EPSQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGATA 443
Query: 118 AYE 120
A+E
Sbjct: 444 AFE 446
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T+ V LS +D L+ + G + ++R+ D +G SRG+ F+++ T + +A E
Sbjct: 289 TIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALE 347
>gi|302786704|ref|XP_002975123.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
gi|300157282|gb|EFJ23908.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
Length = 137
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 40 LCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNL 90
L YDP DP A GDP+ T+F+G+LS+ T+E L++ +YG VK +
Sbjct: 83 LAEEIPKYDPRSDPNARGDPYKTLFIGKLSYETTEHRLQREFERYGPVKRV 133
>gi|238882323|gb|EEQ45961.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 349
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+ DP TVF+ RL + +E + +A ++YG ++++R++RD G SRGY FV YE
Sbjct: 117 MKDPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRD-KQGKSRGYGFVVYE 170
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
C VFVG LS+ +ED L K S +G V+ + ++ D TG SRG+AFV + E
Sbjct: 5 CKVFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREE 56
>gi|405972485|gb|EKC37251.1| MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein
[Crassostrea gigas]
Length = 388
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
V++G L H E +++ MS++G+VK +++ R I TG S+GYAFVE+ ++
Sbjct: 47 VYLGHLPHGFYEKQIKQYMSQFGKVKAVKVSRSIKTGKSKGYAFVEFYSD 96
>gi|291241059|ref|XP_002740425.1| PREDICTED: U2 (RNU2) small nuclear RNA auxiliary factor 2-like
[Saccoglossus kowalevskii]
Length = 466
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 46 LYDPLGDPKAI--GDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRG 103
L+ P G + PH +F+G L ++ +ED +++ ++ +G +K LV+D T S+G
Sbjct: 241 LFSPTGVVSTVVPDSPH-KIFIGGLPNYLNEDQVKELLTSFGELKAFNLVKDSATSLSKG 299
Query: 104 YAFVEYETER 113
YAF EY E+
Sbjct: 300 YAFCEYIDEK 309
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R A + +G +K++ + D +T +G+AFVEYE + A E
Sbjct: 110 CRVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALE 169
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R A + +G +K++ + D +T +G+AFVEYE + A E
Sbjct: 143 CRVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALE 202
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R A + +G +K++ + D +T +G+AFVEYE + A E
Sbjct: 109 CRVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALE 168
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG +S EDT+R A + +G +K++ + D +T +G+AFVEYE + A E
Sbjct: 132 CRVYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALE 191
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ D FVG L+ T D L KA S+YG + + +++ D TG SRG+ FV + E+ M
Sbjct: 1 MADVEDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSM 60
Query: 116 RRAYE 120
E
Sbjct: 61 NDVIE 65
>gi|390979698|gb|AFM30908.1| boule [Capra hircus]
Length = 255
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|344230215|gb|EGV62100.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 321
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ DP+ TVFV RL + E + K S++G ++++R++R TG SRGY F+ +E + +
Sbjct: 114 MKDPYRTVFVSRLDYSLGEIDVSKHFSRFGPIESVRIIRSSSTGKSRGYGFIVFEKDTDA 173
Query: 116 R 116
+
Sbjct: 174 K 174
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 10 FYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLY---DPLGDPKAIGDPHCTVFVG 66
F S+ PI S TD H NAI +L SA L+ +P + + H VFVG
Sbjct: 143 FSPQSFSPIDIHSTS-TDSHLA-NAI---VLQESAVLHSASEPPMEMRIDTSKHFHVFVG 197
Query: 67 RLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
LS S D L+ KYG V +++RD T S+GY FV + ++ A
Sbjct: 198 DLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENA 249
>gi|432911999|ref|XP_004078817.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 523
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 100 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALE 159
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
++V + S++ ++ +GR+K+ L R+ TG +GY F+EY+
Sbjct: 199 IYVASVHPDLSDEDIKSVFEAFGRIKSCMLAREPTTGRHKGYGFIEYD 246
>gi|348541381|ref|XP_003458165.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 513
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 89 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEMPEAAQLALE 148
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +G++K+ L R+ TG +GY F+EYE + + A
Sbjct: 188 IYVASVHPDLSDDDIKSVFEAFGKIKSCMLAREPTTGRHKGYGFIEYEKAQSAQDA 243
>gi|414590409|tpg|DAA40980.1| TPA: hypothetical protein ZEAMMB73_597299 [Zea mays]
Length = 658
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G P +F+ S+ T+E L K K+GRV + R+VRD TG SRG+ F+ + + +
Sbjct: 572 LGKPGKNLFIAGFSYATTERDLEKKFCKFGRVTSARVVRDKRTGDSRGFGFLSLDKDEDA 631
Query: 116 RRAYEVC 122
A C
Sbjct: 632 DAAIRAC 638
>gi|414590408|tpg|DAA40979.1| TPA: hypothetical protein ZEAMMB73_597299 [Zea mays]
Length = 657
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+G P +F+ S+ T+E L K K+GRV + R+VRD TG SRG+ F+ + + +
Sbjct: 571 LGKPGKNLFIAGFSYATTERDLEKKFCKFGRVTSARVVRDKRTGDSRGFGFLSLDKDEDA 630
Query: 116 RRAYEVC 122
A C
Sbjct: 631 DAAIRAC 637
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+FV LS +TSE TLR A +G + ++++ D ++ S+GYAFVEY TE
Sbjct: 303 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTE 352
>gi|148667614|gb|EDL00031.1| bol, boule-like (Drosophila), isoform CRA_a [Mus musculus]
Length = 358
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 112 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 165
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 17 PIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE-D 75
P + G DI+P R S A L + P P ++FVG LS +E D
Sbjct: 195 PNFVSTTTGQDINPTGQRTFRLNWASGATLQSSI--PTT---PEYSLFVGDLSPTATEAD 249
Query: 76 TLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
L +K+ VK +R++ D +TGASR + FV + E E RRA
Sbjct: 250 LLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFGNEEERRRA 292
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 54 KAIGD----PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
K GD P T+FVG LS ++D L +A S++G VKN+RL D +G +G+ +VE+
Sbjct: 422 KTFGDTTSPPSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEF 481
Query: 110 ETEREMRRAY 119
++A+
Sbjct: 482 SDVETAKKAH 491
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 51 GDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
GD + + ++FVGRLS D L K ++ G V + + D TG SRG+ +V +
Sbjct: 323 GDAMDVDNEIKSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFS 382
Query: 111 TEREMRRAYEVCG 123
T + +A E+ G
Sbjct: 383 TSEAVEKAIELNG 395
>gi|410925539|ref|XP_003976238.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 506
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 92 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSFDSVTMKHKGFAFVEYEMPEAAQLALE 151
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++V + S+D ++ +GR+K+ L R+ TG +GY FVEY+ + + A
Sbjct: 191 IYVASVHPDLSDDDIKSVFEAFGRIKSCLLAREPTTGRHKGYGFVEYDKAQSAQDA 246
>gi|209875917|ref|XP_002139401.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555007|gb|EEA05052.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 395
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 18 IQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCT-VFVGRLSHFTSEDT 76
IQ +G D P DN + ++ S A + + + G + T +FVG L +++
Sbjct: 94 IQTNETEGGD--PGDNKVTSSVSSSGA-----VTNNNSSGTFNATKIFVGGLPQSCTDEK 146
Query: 77 LRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET----EREMRRAYE 120
LR+ KYG +KNL ++ D T RG+ FVEYE+ E MR Y+
Sbjct: 147 LREHFGKYGMIKNLSVMVDRDTNRHRGFGFVEYESPESVEEVMRHYYD 194
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+F G LS T+ +LR S YG + + ++ + TG SRG+ F+ + +E +
Sbjct: 16 IFCGGLSDVTTNTSLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESV 68
>gi|452845346|gb|EME47279.1| hypothetical protein DOTSEDRAFT_69274 [Dothistroma septosporum
NZE10]
Length = 353
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 46 LYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD-----IVTGA 100
LY P D GD T+FV R+S+ TS L K ++G ++ +R+V+D G
Sbjct: 89 LYKPNEDANIRGDAFKTLFVSRMSYDTSTKDLEKEFGRFGPIERVRIVQDRGEKSKKKGK 148
Query: 101 SRGYAFVEYETEREMRRAYEVC 122
SRGY FV +E E++M+ AY+ C
Sbjct: 149 SRGYGFVLFEKEKDMKTAYKDC 170
>gi|407044727|gb|EKE42787.1| enhancer binding protein-2, putative [Entamoeba nuttalli P19]
Length = 229
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++G LS+ T+E+ L+ +G++K +L+ I G SRG+AFVEYETE + ++A
Sbjct: 2 TKLYIGNLSYKTTEENLKTHFESFGKIKEAKLM--IFRGYSRGFAFVEYETEEDAKKAVA 59
Query: 121 VCG 123
G
Sbjct: 60 ANG 62
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T++ TL A S+YG + + +++ D TG SRG+ FV ++ E+ MR A E
Sbjct: 9 FVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIE 65
>gi|407893429|ref|ZP_11152459.1| RNP-1 like RNA-binding protein [Diplorickettsia massiliensis 20B]
Length = 132
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
++VG LS+ +D LR+ + YG VK ++++RD +G S+G+ FVE ET E + A E
Sbjct: 1 MYVGGLSYSVDDDGLRELFTPYGEVKFVKVIRDFHSGRSKGFGFVEMETPEEAKEAIE 58
>gi|380492752|emb|CCF34374.1| U1 small nuclear ribonucleoprotein [Colletotrichum higginsianum]
Length = 417
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 33 NAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRL 92
A +L + P DP GD T+ V RLS+ +E L + ++G ++ +R+
Sbjct: 74 QAAVESLKTEGPKNFKPHEDPNIRGDAFKTLIVARLSYEANEQDLEREFGRFGPIERIRI 133
Query: 93 VRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
+ D RGYAFV +E E++MR A + C
Sbjct: 134 ITDTHAHEKPRKKKKPHRGYAFVVFEREKDMRAALDAC 171
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ D FVG L+ T + +L+ A SKYG V + +++ D TG SRG+ FV + ++ M
Sbjct: 1 MADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAM 60
Query: 116 RRAYE 120
R+A E
Sbjct: 61 RQAIE 65
>gi|307174131|gb|EFN64789.1| Protein boule [Camponotus floridanus]
Length = 898
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG +S TSE L + S YG VK +++ D G S+GY FV +ETE E +R
Sbjct: 128 IFVGGISASTSEAELAQLFSAYGNVKATKIISDRA-GVSKGYGFVTFETEEEAKR 181
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C ++VG +S ED +++ S +G +KN+ L D VT +G+AF+E+ET + A E
Sbjct: 166 CRIYVGSISFDLREDHIKQTFSPFGPIKNINLSWDTVTMKHKGFAFIEFETPEAAQLALE 225
>gi|268574300|ref|XP_002642127.1| C. briggsae CBR-RNP-4 protein [Caenorhabditis briggsae]
Length = 142
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
VFV + +ED + S+YG++KN+ L D TG +GYA VEYET++E A E
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEASEAIE 114
>gi|68486549|ref|XP_712825.1| hypothetical protein CaO19.14156 [Candida albicans SC5314]
gi|46434241|gb|EAK93656.1| hypothetical protein CaO19.14156 [Candida albicans SC5314]
Length = 233
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+ DP TVF+ RL + +E + +A ++YG ++++R++RD G SRGY FV YE
Sbjct: 1 MKDPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRD-KQGKSRGYGFVVYE 54
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
T++VG L+ E+ LR A +G +K L + +D TG RG+ FVE+E E + + A E
Sbjct: 22 TLYVGGLAEQVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFVEFEEEDDAKEAME 80
>gi|212528552|ref|XP_002144433.1| rRNA processing protein gar2 [Talaromyces marneffei ATCC 18224]
gi|210073831|gb|EEA27918.1| ribosomal biogenesis protein Gar2 [Talaromyces marneffei ATCC
18224]
Length = 453
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYET 111
D TV+VGR+ H E +R S++G + LRL R+ VTG S+ YAF+E+ +
Sbjct: 199 DEPGTVYVGRIPHGFYEHQMRAYFSQFGEITRLRLSRNRVTGRSKHYAFIEFAS 252
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 51 GDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
GD D T+FVG L+H TSE LR+ +YGRV + ++V + TG S+G+ FV+++
Sbjct: 25 GDADGREDTAGTIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFD 84
Query: 111 TERE 114
R+
Sbjct: 85 DARD 88
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
H VFVG LS + D ++ A + +GR+ + R+V+D+ TG S+GY FV +
Sbjct: 105 HFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSF 154
>gi|68486606|ref|XP_712797.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
gi|46434210|gb|EAK93626.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
Length = 305
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
+ DP TVF+ RL + +E + +A ++YG ++++R++RD G SRGY FV YE
Sbjct: 75 MKDPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRD-KQGKSRGYGFVVYE 128
>gi|440639828|gb|ELR09747.1| hypothetical protein GMDG_04233 [Geomyces destructans 20631-21]
Length = 489
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 39 LLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI-- 96
LL Y P D GD T+ V RLS+ +E L + ++G ++ +R+V D
Sbjct: 121 LLKEGPADYKPQEDQNIRGDAFKTLIVARLSYDATEQDLEREFGRFGPIERIRIVTDTHQ 180
Query: 97 ------VTGASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 181 DEKPNKKKKKHRGYAFVVFEREKDMRAALDGC 212
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
H VFVG LS + D ++ A + +GR+ + R+V+D+ TG S+GY FV +
Sbjct: 105 HFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSF 154
>gi|307176032|gb|EFN65791.1| Splicing factor U2AF 50 kDa subunit [Camponotus floridanus]
Length = 432
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
P + D +F+G L ++ +ED +++ + +G+++ LV+D TG S+GYAF EY
Sbjct: 217 PGTVPDSPHKIFIGGLPNYLNEDQVKELLMSFGQLRAFNLVKDSATGLSKGYAFCEY 273
>gi|154305179|ref|XP_001552992.1| hypothetical protein BC1G_08884 [Botryotinia fuckeliana B05.10]
Length = 208
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
Y P ++ + A ++ + L+ P DP GD T+ V RL + +E
Sbjct: 56 YQPTESWLQRKDRVKLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATE 115
Query: 75 DTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMR 116
L + ++G ++ +R+V D RGYAFV +E E++MR
Sbjct: 116 KDLEREFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMR 165
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
H VFVG LS + D ++ A + +GR+ + R+V+D+ TG S+GY FV +
Sbjct: 105 HFHVFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSF 154
>gi|355750727|gb|EHH55054.1| hypothetical protein EGM_04185 [Macaca fascicularis]
Length = 295
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 51 GDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
P P ++V LS T+E++LR A +G++ + LV D + RG+AF+ Y
Sbjct: 69 SSPNQPSIPKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYS 128
Query: 111 TEREMRRAYE 120
TE E +A E
Sbjct: 129 TEEESEKAIE 138
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
H TVFVG+L+ E L + +SK G+V+N+ L+RD T S+G+A+VE
Sbjct: 7 HRTVFVGQLTQKVREKDLERFLSKTGKVENVLLIRDKFTNRSKGFAYVE 55
>gi|297264635|ref|XP_002799064.1| PREDICTED: protein boule-like isoform 3 [Macaca mulatta]
gi|44887720|sp|Q8WP23.2|BOLL_MACFA RecName: Full=Protein boule-like
Length = 283
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++VG LS+ T+ED LR S++G +++++L+ D TG S+G+ F+ Y + ++ A
Sbjct: 2 SQSKIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCESA 61
>gi|392579785|gb|EIW72912.1| hypothetical protein TREMEDRAFT_59073 [Tremella mesenterica DSM
1558]
Length = 736
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
T+++GR+ H ED +++ S++G V LRL R+ TGAS+ YA++E +E
Sbjct: 577 TLYLGRIPHGFYEDEMKEYFSQFGEVTQLRLARNRKTGASKHYAYIEMSSE 627
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 94 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 153
Query: 120 EVCG 123
+ G
Sbjct: 154 QQMG 157
>gi|212721594|ref|NP_001131930.1| uncharacterized protein LOC100193321 [Zea mays]
gi|194692948|gb|ACF80558.1| unknown [Zea mays]
Length = 92
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 58 DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
+P CTVF+G L E L + + + GRV +L + RD T +GYAF EYETE
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETE 58
>gi|355565070|gb|EHH21559.1| hypothetical protein EGK_04658 [Macaca mulatta]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|242011908|ref|XP_002426685.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510856|gb|EEB13947.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 605
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 50 LGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
+GD P A I P +FV +L+ TS+ L S++G VK+ ++RD +TG S YAF+
Sbjct: 226 VGDIPDADIAPPENVLFVCKLNPVTSDHDLSLIFSRFGTVKSCEVIRDQITGDSLQYAFI 285
Query: 108 EYETEREMRRAY 119
E+E + AY
Sbjct: 286 EFENRKACEEAY 297
>gi|44887721|sp|Q924M5.2|BOLL_MOUSE RecName: Full=Protein boule-like
Length = 281
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 88
>gi|331217197|ref|XP_003321277.1| hypothetical protein PGTG_02319 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300267|gb|EFP76858.1| hypothetical protein PGTG_02319 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 286
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 58 DP-HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMR 116
DP H +FVG L+ S+D L A SK+ R+VRD VT S+GY FV Y+ +
Sbjct: 156 DPAHFRLFVGDLAPEVSDDGLAAAFSKWSSFVKARVVRDKVTTKSKGYGFVSYKDPEDFM 215
Query: 117 RAYE 120
+A++
Sbjct: 216 KAWK 219
>gi|297264633|ref|XP_002799063.1| PREDICTED: protein boule-like isoform 2 [Macaca mulatta]
Length = 289
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 41 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 94
>gi|302563755|ref|NP_001180724.1| protein boule-like [Macaca mulatta]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|444318251|ref|XP_004179783.1| hypothetical protein TBLA_0C04680 [Tetrapisispora blattae CBS 6284]
gi|387512824|emb|CCH60264.1| hypothetical protein TBLA_0C04680 [Tetrapisispora blattae CBS 6284]
Length = 371
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 47 YDPLGDPKAIG-DPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRD---------- 95
++P DP G DP+ T+FVGRL + +E L+K SK+G++ +R+V+D
Sbjct: 103 WNPDEDPNIKGTDPYKTIFVGRLPYDITEIELQKIFSKFGKIDKIRIVKDNHHRDENTAK 162
Query: 96 IVTGASRGYAFVEYETEREMRRAYEVCG 123
I S+GYAF+ + + A G
Sbjct: 163 IPMNKSKGYAFIVFNDASSSKMATREIG 190
>gi|332209690|ref|XP_003253946.1| PREDICTED: protein boule-like isoform 2 [Nomascus leucogenys]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|221504716|gb|EEE30381.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 802
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
TVFVG L SE+ LR+A+ G VK +R++RD VT S+G+ FV +E RA
Sbjct: 667 TVFVGNLPSRCSEEDLRRALESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSAARA 723
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 102 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 161
Query: 120 EVCG 123
+ G
Sbjct: 162 QQMG 165
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 94 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 153
Query: 120 EVCG 123
+ G
Sbjct: 154 QQMG 157
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS LR+A +G V + +++RD T S+GY FV Y E RA
Sbjct: 102 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
Query: 120 E 120
E
Sbjct: 162 E 162
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS LR+A +G V + +++RD T S+GY FV Y E RA
Sbjct: 174 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 233
Query: 120 E 120
E
Sbjct: 234 E 234
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS LR+A +G V + +++RD T S+GY FV Y E RA
Sbjct: 130 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 189
Query: 120 E 120
E
Sbjct: 190 E 190
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+V+VG +++ + ED +R+A + YGR+ +R+ + +GYAFV+++ + +A
Sbjct: 238 SVYVGNIANLSEED-IRQAFASYGRISEVRIFK------MQGYAFVKFDNKDAAAKA 287
>gi|118379871|ref|XP_001023101.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila]
gi|89304868|gb|EAS02856.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila
SB210]
Length = 1019
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+F+G L++ +E + S++G++ +LRLVRD TG S+GY F+ YE +R A E
Sbjct: 775 IFIGGLNYDLNEGDISTVFSQWGQIVDLRLVRDKKTGRSKGYCFLAYEDQRSTILAVE 832
>gi|37574731|ref|NP_932074.1| protein boule-like isoform 1 [Homo sapiens]
gi|119590579|gb|EAW70173.1| bol, boule-like (Drosophila), isoform CRA_c [Homo sapiens]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|332209692|ref|XP_003253947.1| PREDICTED: protein boule-like isoform 3 [Nomascus leucogenys]
Length = 289
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 41 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 94
>gi|167376798|ref|XP_001734154.1| 29 kDa ribonucleoprotein B, chloroplast precursor [Entamoeba dispar
SAW760]
gi|165904519|gb|EDR29735.1| 29 kDa ribonucleoprotein B, chloroplast precursor, putative
[Entamoeba dispar SAW760]
Length = 229
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++G LS+ T+E+ L+ +G++K +L+ + G SRG+AFVEYETE + ++A
Sbjct: 2 TKLYIGNLSYKTTEENLKTHFESFGKIKEAKLM--VFRGYSRGFAFVEYETEEDAKKAVA 59
Query: 121 VCG 123
G
Sbjct: 60 ANG 62
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH +F+G L ++ +ED +R+ + +G+++ LV+D TG S+GYAF EY
Sbjct: 255 PH-KIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYAFCEY 304
>gi|426338150|ref|XP_004033052.1| PREDICTED: protein boule-like isoform 2 [Gorilla gorilla gorilla]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|34784008|gb|AAH56814.1| Peptidylprolyl isomerase (cyclophilin)-like 4 [Danio rerio]
Length = 454
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 24 DGTDIHPHDNAICRALLCSSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAM 81
+G D D I + A L + +GD P A I P +FV +L+ T+++ L
Sbjct: 201 EGKDPEELDELIKDKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIF 260
Query: 82 SKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
S++G +K ++RD TG S YAF+E+E E + +AY
Sbjct: 261 SRFGLIKCCEIIRDWKTGESLCYAFIEFEKEEDCEKAY 298
>gi|297669116|ref|XP_002812751.1| PREDICTED: protein boule-like isoform 1 [Pongo abelii]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|221484519|gb|EEE22813.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 802
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
TVFVG L SE+ LR+A+ G VK +R++RD VT S+G+ FV +E RA
Sbjct: 667 TVFVGNLPSRCSEEDLRRALESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSAARA 723
>gi|190358439|ref|NP_001121802.1| peptidyl-prolyl cis-trans isomerase-like 4 [Danio rerio]
Length = 454
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 24 DGTDIHPHDNAICRALLCSSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAM 81
+G D D I + A L + +GD P A I P +FV +L+ T+++ L
Sbjct: 201 EGKDPEELDELIKDKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIF 260
Query: 82 SKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
S++G +K ++RD TG S YAF+E+E E + +AY
Sbjct: 261 SRFGLIKCCEIIRDWKTGESLCYAFIEFEKEEDCEKAY 298
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS LR+A +G V + +++RD T S+GY FV Y E RA
Sbjct: 134 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
Query: 120 E 120
E
Sbjct: 194 E 194
>gi|332815073|ref|XP_001169371.2| PREDICTED: protein boule-like isoform 1 [Pan troglodytes]
gi|397509935|ref|XP_003825366.1| PREDICTED: protein boule-like isoform 2 [Pan paniscus]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 100
>gi|332209688|ref|XP_003253945.1| PREDICTED: protein boule-like isoform 1 [Nomascus leucogenys]
Length = 283
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
++V LS T+E++LR A +G++ ++ LV D V RG+AF+ YETE E ++A E
Sbjct: 92 LYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIE 149
>gi|426338152|ref|XP_004033053.1| PREDICTED: protein boule-like isoform 3 [Gorilla gorilla gorilla]
Length = 289
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 41 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 94
>gi|412992636|emb|CCO18616.1| predicted protein [Bathycoccus prasinos]
Length = 888
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETE 112
V VG LS+ T++++L +AM ++G V N R+V D TG SRG+ FV +E E
Sbjct: 171 VMVGNLSYSTTDESLGRAMERFGYVANARVVLDRETGQSRGFGFVTFEDE 220
>gi|344268292|ref|XP_003405995.1| PREDICTED: protein boule-like [Loxodonta africana]
Length = 311
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 100
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
V+VG LS T++DTLR+A S++G+V + ++RD TG SRG+ FV + + +E
Sbjct: 3 AKVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQE 56
>gi|113927267|emb|CAL25726.1| boll protein [Homo sapiens]
Length = 289
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 41 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 94
>gi|426338148|ref|XP_004033051.1| PREDICTED: protein boule-like isoform 1 [Gorilla gorilla gorilla]
Length = 292
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 44 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQK 97
>gi|297669118|ref|XP_002812752.1| PREDICTED: protein boule-like isoform 2 [Pongo abelii]
Length = 283
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|156400838|ref|XP_001638999.1| predicted protein [Nematostella vectensis]
gi|156226124|gb|EDO46936.1| predicted protein [Nematostella vectensis]
Length = 301
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P +FVG L +E MS YG ++ L LVR VTG S+GY FVEY T +A
Sbjct: 111 PESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQA 170
Query: 119 YE 120
+
Sbjct: 171 KQ 172
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 58 DPHC-TVFVGRLSH-FTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
D H T+FV RL F + +++ S+ G V ++ + G SRG+AFV+Y T E
Sbjct: 201 DVHSRTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEA 260
Query: 116 RR 117
+
Sbjct: 261 EK 262
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
C +F+G L+ T+E+TLR +KYG+V L++++D TG SRG+ F+ +E
Sbjct: 156 CKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFE 205
>gi|164565432|ref|NP_001106841.1| protein boule-like [Rattus norvegicus]
gi|392350757|ref|XP_003750748.1| PREDICTED: protein boule-like [Rattus norvegicus]
gi|149046147|gb|EDL99040.1| similar to boule (predicted), isoform CRA_a [Rattus norvegicus]
Length = 293
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 100
>gi|408398954|gb|EKJ78079.1| hypothetical protein FPSE_01540 [Fusarium pseudograminearum CS3096]
Length = 399
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 15 YHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPHCTVFVGRLSHFTSE 74
YHP ++ L+ + Y P D GD T+ V RLS+ E
Sbjct: 56 YHPTESWLQRRDRKKREKKEKLENLVTEAPEHYRPDKDTNIRGDAFKTLIVARLSYEADE 115
Query: 75 DTLRKAMSKYGRVKNLRLVRDI--------VTGASRGYAFVEYETEREMRRAYEVC 122
L K ++G ++ +R+V D RGYAFV +E E++MR A + C
Sbjct: 116 KDLEKEFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRAALDSC 171
>gi|406946955|gb|EKD77999.1| glycine-rich RNA-binding protein, partial [uncultured bacterium]
Length = 107
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++VG LS+ T+ED LR S+YG ++ ++L+ D TG S+G+ F+ Y + ++ A
Sbjct: 2 SQSKIYVGNLSYNTTEDGLRDYFSQYGTIEEIKLIIDFNTGRSKGFGFITYGSAQDCENA 61
Query: 119 YEVCG 123
G
Sbjct: 62 LAANG 66
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
I +C +F+G L+ T+ED L+ SKYG V L++++D TG SRG+ F+ +E
Sbjct: 191 ISKDNCKMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFE 245
>gi|224156534|ref|XP_002199861.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Taeniopygia guttata]
Length = 156
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
C V+VG + + EDT+R+A + +G +K++ + D VT +G+AFVEYE + A E
Sbjct: 13 CRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 72
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFV 107
++V + S+D ++ +G++K+ L RD TG +GY F+
Sbjct: 112 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFI 156
>gi|241166827|ref|XP_002409934.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
gi|215494685|gb|EEC04326.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
Length = 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEY 109
PH +F+G L ++ +ED +R+ + +G+++ LV+D TG S+GYAF EY
Sbjct: 234 PH-KIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSATGLSKGYAFCEY 283
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 56 IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREM 115
+ D FVG L+ T + L KA S+YG + + +++ D TG SRG+ FV + E+ M
Sbjct: 1 MADVEYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSM 60
Query: 116 RRAYE 120
A E
Sbjct: 61 NDAIE 65
>gi|395535114|ref|XP_003769577.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4 [Sarcophilus
harrisii]
Length = 486
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 219 TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +A+
Sbjct: 279 ESLCYAFIEFEKEEDCEKAF 298
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+++VG LS+ E+ LR+ ++YG VK ++L D TG RG+AFVE +++ E RA E
Sbjct: 1 MSIYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFVEMQSDEEEERAIE 60
Query: 121 VC 122
Sbjct: 61 AL 62
>gi|14719414|ref|NP_149019.1| protein boule-like isoform 2 [Homo sapiens]
gi|44887719|sp|Q8N9W6.2|BOLL_HUMAN RecName: Full=Protein boule-like
gi|14279684|gb|AAK58689.1| BOULE [Homo sapiens]
gi|16554131|dbj|BAB71664.1| unnamed protein product [Homo sapiens]
gi|21707064|gb|AAH33674.1| Bol, boule-like (Drosophila) [Homo sapiens]
gi|62702117|gb|AAX93045.1| unknown [Homo sapiens]
gi|119590578|gb|EAW70172.1| bol, boule-like (Drosophila), isoform CRA_b [Homo sapiens]
gi|312152350|gb|ADQ32687.1| bol, boule-like (Drosophila) [synthetic construct]
Length = 283
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
+V+VG LS+ +++ L+ A +KYG VK +++ D TG RG+AFVE E+E E A E
Sbjct: 1 MSVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIE 60
>gi|359463230|ref|ZP_09251793.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
++FVG LS+ +E L+ A S++G VK ++L D TG +G+AF+E + E E +A
Sbjct: 1 MSIFVGNLSYAITEQDLKTAFSQFGAVKQVKLPIDRETGKKQGFAFIEMDNEAEEAKA 58
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 53 PKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
P + D ++VG L SE+ ++ +S YG++K LV+D TG S+G+AF EY+
Sbjct: 370 PTNVPDSENKIYVGGLPSNLSEEQVKSLLSAYGKLKAFNLVKDTNTGVSKGFAFCEYQ 427
>gi|164565415|ref|NP_083543.2| protein boule-like isoform 1 [Mus musculus]
Length = 293
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E+ LRK S+YG VK +++V D G S+GY F+ +ET+ + ++
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQK 100
>gi|237839677|ref|XP_002369136.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966800|gb|EEB01996.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 802
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 62 TVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
TVFVG L SE+ LR+A+ G VK +R++RD VT S+G+ FV +E RA
Sbjct: 667 TVFVGNLPSRCSEEDLRRALESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSAARA 723
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS + + ++ A + +GR+ + R+V+D+ TG S+GY FV + + + A
Sbjct: 29 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 88
Query: 120 EVCG 123
+ G
Sbjct: 89 QQMG 92
>gi|114582407|ref|XP_001169413.1| PREDICTED: protein boule-like isoform 2 [Pan troglodytes]
gi|114582411|ref|XP_001169481.1| PREDICTED: protein boule-like isoform 5 [Pan troglodytes]
gi|397509933|ref|XP_003825365.1| PREDICTED: protein boule-like isoform 1 [Pan paniscus]
gi|49609405|emb|CAG30556.1| BOULE protein [Pan paniscus]
Length = 283
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 88
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 60 HCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAY 119
H VFVG LS LR+A +G V + +++RD T S+GY FV Y E RA
Sbjct: 21 HFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
Query: 120 E 120
E
Sbjct: 81 E 81
>gi|348561191|ref|XP_003466396.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Cavia
porcellus]
Length = 489
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 219 TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +A+
Sbjct: 279 ESLCYAFIEFEKEEDCEKAF 298
>gi|310789384|gb|EFQ24917.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 406
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--------VT 98
+ P DP GD T+ V RLS+ +E L + ++G ++ +R++ D
Sbjct: 88 FKPHEDPNIRGDAFKTLIVARLSYEANEQDLEREFGRFGPIERIRIITDTHAHEKPRKKK 147
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
RGYAFV +E E++MR A + C
Sbjct: 148 KPHRGYAFVVFEREKDMRAALDAC 171
>gi|21752331|dbj|BAC04171.1| unnamed protein product [Homo sapiens]
Length = 339
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRR 117
+FVG + T+E LRK S+YG VK +++V D G S+GY FV +ET+ + ++
Sbjct: 41 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQK 94
>gi|126310681|ref|XP_001370869.1| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 4
[Monodelphis domestica]
Length = 486
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 42 SSAGLYDPLGD-PKA-IGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTG 99
+ A L + +GD P A I P +FV +L+ T+++ L S++G +K+ ++RD TG
Sbjct: 219 TQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTG 278
Query: 100 ASRGYAFVEYETEREMRRAY 119
S YAF+E+E E + +A+
Sbjct: 279 ESLCYAFIEFEKEEDCEKAF 298
>gi|330689294|pdb|2RRB|A Chain A, Refinement Of Rna Binding Domain In Human Tra2 Beta
Protein
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 49 PLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVE 108
PLG +A DP+C + V LS +T+E LR+ SKYG + ++ +V D + SRG+AFV
Sbjct: 2 PLGS-RANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVY 60
Query: 109 YETEREMRRAYE 120
+E + + A E
Sbjct: 61 FENVDDAKEAKE 72
>gi|289741197|gb|ADD19346.1| splicing factor U2AF large subunit [Glossina morsitans morsitans]
Length = 423
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 30 PHDNAICRALLCSSAGLYDPLGDPKAIG--------DPHCTVFVGRLSHFTSEDTLRKAM 81
PHD ++ S+ P+ P A G PH +F+G L ++ +ED +++ +
Sbjct: 181 PHDYQPMPGVVEST-----PVAQPVANGVISAVVPDSPH-KIFIGGLPNYLNEDQVKELL 234
Query: 82 SKYGRVKNLRLVRDIVTGASRGYAFVEY 109
+G+++ LV+D TG S+GYAF EY
Sbjct: 235 LSFGQLRAFNLVKDAATGLSKGYAFCEY 262
>gi|121706530|ref|XP_001271527.1| rRNA processing protein gar2 [Aspergillus clavatus NRRL 1]
gi|119399675|gb|EAW10101.1| ribosomal biogenesis protein Gar2 [Aspergillus clavatus NRRL 1]
Length = 489
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 51 GDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYE 110
G+P+ G TV++GR+ H E +R S++G + LRL R+ +TG S+ YAFVE+
Sbjct: 232 GEPEEPG----TVYLGRIPHGFYEHQMRAYFSQFGEITRLRLSRNRITGRSKHYAFVEFA 287
Query: 111 T 111
+
Sbjct: 288 S 288
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETERE 114
+++G L++ +ED LRKA +G V ++R++ D ++G SRG AFVE + E
Sbjct: 1 MNIYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEE 54
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 59 PHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
P ++V LS T+EDTLR ++G + ++ +V D V +G+AF+ YETE E +A
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKA 134
Query: 119 YE 120
+
Sbjct: 135 IQ 136
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 64 FVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYE 120
FVG L+ T++ TL +A S++G + + +++ D TG SRG+ FV ++ E+ MR A E
Sbjct: 9 FVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIE 65
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 63 VFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRA 118
+FVG LS T++ +L++A S +G V R++ D TG SRG+ FVE+ E + ++A
Sbjct: 39 LFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKA 94
>gi|116207864|ref|XP_001229741.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
gi|88183822|gb|EAQ91290.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
Length = 387
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 47 YDPLGDPKAIGDPHCTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI--------VT 98
Y P DP GD T+ V RL + E L + ++G ++ +R++RD
Sbjct: 88 YSPHDDPNIRGDAFKTLIVARLDYSADEKDLEREFGRFGPIERIRIIRDTHAHEKGNKKK 147
Query: 99 GASRGYAFVEYETEREMRRAYEVC 122
RGY FV +E E++MR A + C
Sbjct: 148 KPHRGYGFVVFEREKDMRAALDGC 171
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,019,660,974
Number of Sequences: 23463169
Number of extensions: 77526418
Number of successful extensions: 182417
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14688
Number of HSP's successfully gapped in prelim test: 3034
Number of HSP's that attempted gapping in prelim test: 156612
Number of HSP's gapped (non-prelim): 27008
length of query: 123
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 34
effective length of database: 5,976,006,030
effective search space: 203184205020
effective search space used: 203184205020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)