Your job contains 1 sequence.
>033267
MARIKVHELRQKSKVDLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA
IKV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033267
(123 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039802 - symbol:AT2G39390 species:3702 "Arabi... 487 1.8e-46 1
TAIR|locus:2074974 - symbol:AT3G09500 species:3702 "Arabi... 478 1.6e-45 1
TAIR|locus:2100686 - symbol:AT3G55170 species:3702 "Arabi... 476 2.7e-45 1
RGD|1303007 - symbol:Rpl35 "ribosomal protein L35" specie... 344 2.6e-31 1
UNIPROTKB|Q98TF7 - symbol:RPL35 "60S ribosomal protein L3... 340 6.9e-31 1
UNIPROTKB|Q3MHM7 - symbol:RPL35 "60S ribosomal protein L3... 340 6.9e-31 1
UNIPROTKB|P42766 - symbol:RPL35 "60S ribosomal protein L3... 340 6.9e-31 1
UNIPROTKB|Q29361 - symbol:RPL35 "60S ribosomal protein L3... 336 1.8e-30 1
UNIPROTKB|F1NYC0 - symbol:RPL35 "60S ribosomal protein L3... 335 2.3e-30 1
UNIPROTKB|E2RPE5 - symbol:RPL35 "Uncharacterized protein"... 335 2.3e-30 1
UNIPROTKB|E1BFM3 - symbol:Bt.62501 "Uncharacterized prote... 334 3.0e-30 1
RGD|1586622 - symbol:LOC686074 "similar to 60S ribosomal ... 318 1.5e-28 1
RGD|1589358 - symbol:LOC681918 "similar to 60S ribosomal ... 318 1.5e-28 1
ASPGD|ASPL0000059648 - symbol:AN1228 species:162425 "Emer... 317 1.9e-28 1
ZFIN|ZDB-GENE-020419-2 - symbol:rpl35 "ribosomal protein ... 316 2.4e-28 1
RGD|1563157 - symbol:RGD1563157 "similar to 60S ribosomal... 306 2.8e-27 1
POMBASE|SPCC613.05c - symbol:rpl35 "60S ribosomal protein... 299 1.5e-26 1
FB|FBgn0029785 - symbol:RpL35 "Ribosomal protein L35" spe... 289 1.8e-25 1
UNIPROTKB|F1LUA5 - symbol:F1LUA5 "Uncharacterized protein... 276 4.2e-24 1
UNIPROTKB|F1M6G3 - symbol:F1M6G3 "Uncharacterized protein... 276 4.2e-24 1
RGD|1564550 - symbol:RGD1564550 "similar to 60S ribosomal... 273 8.7e-24 1
SGD|S000002350 - symbol:RPL35A "Ribosomal 60S subunit pro... 267 3.8e-23 1
SGD|S000002295 - symbol:RPL35B "Ribosomal 60S subunit pro... 267 3.8e-23 1
WB|WBGene00004449 - symbol:rpl-35 species:6239 "Caenorhab... 260 2.1e-22 1
UNIPROTKB|G4MSD2 - symbol:MGG_04455 "60S ribosomal protei... 236 7.2e-20 1
RGD|1593195 - symbol:LOC367050 "similar to 60S ribosomal ... 231 2.5e-19 1
DICTYBASE|DDB_G0288349 - symbol:rpl35 "S60 ribosomal prot... 219 4.6e-18 1
GENEDB_PFALCIPARUM|PF11_0260 - symbol:PF11_0260 "ribosoma... 207 8.6e-17 1
UNIPROTKB|Q8IIB4 - symbol:PF11_0260 "60S ribosomal protei... 207 8.6e-17 1
UNIPROTKB|F2Z388 - symbol:RPL35 "60S ribosomal protein L3... 169 9.1e-13 1
UNIPROTKB|H0Y3A0 - symbol:RPL35 "60S ribosomal protein L3... 164 3.1e-12 1
>TAIR|locus:2039802 [details] [associations]
symbol:AT2G39390 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 EMBL:AC004218 GO:GO:0003735
GO:GO:0022625 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
ProtClustDB:CLSN2683258 EMBL:AY035104 EMBL:AY063036 EMBL:AY084718
IPI:IPI00526629 PIR:T00549 RefSeq:NP_181471.1 UniGene:At.22434
ProteinModelPortal:O80626 SMR:O80626 STRING:O80626 PaxDb:O80626
PRIDE:O80626 EnsemblPlants:AT2G39390.1 GeneID:818524
KEGG:ath:AT2G39390 GeneFarm:344 TAIR:At2g39390 InParanoid:O80626
OMA:KKTCAMR PhylomeDB:O80626 Genevestigator:O80626
GermOnline:AT2G39390 Uniprot:O80626
Length = 123
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 101/123 (82%), Positives = 105/123 (85%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR+KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
ISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYA
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query: 121 IKV 123
IKV
Sbjct: 121 IKV 123
>TAIR|locus:2074974 [details] [associations]
symbol:AT3G09500 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0006412 EMBL:AC016661 GO:GO:0003735 GO:GO:0022625
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
eggNOG:COG0255 EMBL:BT004175 EMBL:BT004938 EMBL:AY086291
IPI:IPI00532114 RefSeq:NP_187561.1 UniGene:At.40096
ProteinModelPortal:Q9SF53 SMR:Q9SF53 STRING:Q9SF53 PaxDb:Q9SF53
PRIDE:Q9SF53 EnsemblPlants:AT3G09500.1 GeneID:820107
KEGG:ath:AT3G09500 GeneFarm:346 TAIR:At3g09500 HOGENOM:HOG000207749
InParanoid:Q9SF53 KO:K02918 OMA:LRTKSKE PhylomeDB:Q9SF53
ProtClustDB:CLSN2683258 Genevestigator:Q9SF53 GermOnline:AT3G09500
Uniprot:Q9SF53
Length = 123
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 100/123 (81%), Positives = 104/123 (84%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR+KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query: 121 IKV 123
IKV
Sbjct: 121 IKV 123
>TAIR|locus:2100686 [details] [associations]
symbol:AT3G55170 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831
PROSITE:PS00579 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006412 EMBL:AL132954 GO:GO:0003735 GO:GO:0022625
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
ProtClustDB:CLSN2683258 EMBL:BT006384 IPI:IPI00527437 PIR:T47656
RefSeq:NP_191077.1 RefSeq:NP_974440.1 UniGene:At.35046
ProteinModelPortal:Q9M3D2 SMR:Q9M3D2 STRING:Q9M3D2 PaxDb:Q9M3D2
PRIDE:Q9M3D2 EnsemblPlants:AT3G55170.1 EnsemblPlants:AT3G55170.2
GeneID:824683 KEGG:ath:AT3G55170 GeneFarm:342 TAIR:At3g55170
InParanoid:Q9M3D2 OMA:EKNREMY PhylomeDB:Q9M3D2
Genevestigator:Q9M3D2 GermOnline:AT3G55170 Uniprot:Q9M3D2
Length = 123
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 99/123 (80%), Positives = 103/123 (83%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MARIKVHELR KSK D RVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK++MYFP+RKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120
Query: 121 IKV 123
IKV
Sbjct: 121 IKV 123
>RGD|1303007 [details] [associations]
symbol:Rpl35 "ribosomal protein L35" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
RGD:1303007 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
OrthoDB:EOG45QHFR EMBL:X51705 EMBL:BC058499 IPI:IPI00212783
PIR:A34571 RefSeq:NP_997676.1 UniGene:Rn.3458
ProteinModelPortal:P17078 SMR:P17078 STRING:P17078
PhosphoSite:P17078 PRIDE:P17078 Ensembl:ENSRNOT00000019162
GeneID:296709 KEGG:rno:296709 UCSC:RGD:1303007 InParanoid:P17078
NextBio:641701 Genevestigator:P17078 GermOnline:ENSRNOG00000014272
Uniprot:P17078
Length = 123
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ LKT++++++E +P+RKYA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>UNIPROTKB|Q98TF7 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
Pfam:PF00831 PROSITE:PS00579 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
EMBL:AB046395 IPI:IPI00582832 RefSeq:NP_989604.1 UniGene:Gga.39147
ProteinModelPortal:Q98TF7 SMR:Q98TF7 STRING:Q98TF7 PRIDE:Q98TF7
Ensembl:ENSGALT00000001542 GeneID:374133 KEGG:gga:374133
NextBio:20813648 ArrayExpress:Q98TF7 Uniprot:Q98TF7
Length = 123
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPVRKYA 120
Query: 121 IK 122
IK
Sbjct: 121 IK 122
>UNIPROTKB|Q3MHM7 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
Pfam:PF00831 PROSITE:PS00579 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
OMA:LRTKSKE GeneTree:ENSGT00390000016384 EMBL:BC105179
IPI:IPI00693884 RefSeq:NP_001029667.1 UniGene:Bt.11679
ProteinModelPortal:Q3MHM7 SMR:Q3MHM7 STRING:Q3MHM7 PRIDE:Q3MHM7
Ensembl:ENSBTAT00000004161 GeneID:515534 KEGG:bta:515534 CTD:11224
HOVERGEN:HBG000862 InParanoid:Q3MHM7 OrthoDB:EOG45QHFR
NextBio:20871870 Uniprot:Q3MHM7
Length = 123
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 69/122 (56%), Positives = 90/122 (73%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>UNIPROTKB|P42766 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=TAS] [GO:0005730 "nucleolus" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413
GO:GO:0003729 GO:GO:0003735 EMBL:AL354928 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 KO:K02918 OMA:LRTKSKE CTD:11224
HOVERGEN:HBG000862 OrthoDB:EOG45QHFR EMBL:U12465 EMBL:CR456877
EMBL:AK291072 EMBL:BC000348 EMBL:BC010919 EMBL:BC071915
EMBL:BC094828 EMBL:AB046409 IPI:IPI00412607 PIR:G01477
RefSeq:NP_009140.1 UniGene:Hs.182825 ProteinModelPortal:P42766
SMR:P42766 IntAct:P42766 MINT:MINT-5000320 STRING:P42766
PhosphoSite:P42766 DMDM:1173039 SWISS-2DPAGE:P42766 PaxDb:P42766
PRIDE:P42766 DNASU:11224 Ensembl:ENST00000348462 GeneID:11224
KEGG:hsa:11224 UCSC:uc004boy.1 GeneCards:GC09M127620
HGNC:HGNC:10344 HPA:HPA006047 neXtProt:NX_P42766 PharmGKB:PA34727
InParanoid:P42766 PhylomeDB:P42766 ChiTaRS:RPL35 GenomeRNAi:11224
NextBio:42722 ArrayExpress:P42766 Bgee:P42766 CleanEx:HS_RPL35
Genevestigator:P42766 GermOnline:ENSG00000136942 Uniprot:P42766
Length = 123
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 69/122 (56%), Positives = 90/122 (73%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>UNIPROTKB|Q29361 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 EMBL:AP009124
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918 OMA:LRTKSKE
GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
OrthoDB:EOG45QHFR EMBL:AB055884 EMBL:AY550044 EMBL:DQ629168
EMBL:F14766 RefSeq:NP_999491.1 UniGene:Ssc.11125
ProteinModelPortal:Q29361 SMR:Q29361 STRING:Q29361
Ensembl:ENSSSCT00000006152 GeneID:397598 KEGG:ssc:397598
Uniprot:Q29361
Length = 123
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/122 (55%), Positives = 90/122 (73%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RK+A
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKFA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>UNIPROTKB|F1NYC0 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
HAMAP:MF_00374 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012 OMA:LRTKSKE
GeneTree:ENSGT00390000016384 EMBL:AADN02026322 IPI:IPI00821839
Ensembl:ENSGALT00000038698 ArrayExpress:F1NYC0 Uniprot:F1NYC0
Length = 127
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/121 (57%), Positives = 89/121 (73%)
Query: 2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
A+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI
Sbjct: 6 AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVI 65
Query: 62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAI 121
+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYAI
Sbjct: 66 NQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPVRKYAI 125
Query: 122 K 122
K
Sbjct: 126 K 126
>UNIPROTKB|E2RPE5 [details] [associations]
symbol:RPL35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310
SUPFAM:SSF46561 TIGRFAMs:TIGR00012 OMA:LRTKSKE
GeneTree:ENSGT00390000016384 EMBL:AAEX03006884
ProteinModelPortal:E2RPE5 PRIDE:E2RPE5 Ensembl:ENSCAFT00000032194
NextBio:20855706 Uniprot:E2RPE5
Length = 123
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 68/121 (56%), Positives = 89/121 (73%)
Query: 2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
A+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI
Sbjct: 2 AKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVI 61
Query: 62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAI 121
+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA+
Sbjct: 62 NQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAV 121
Query: 122 K 122
K
Sbjct: 122 K 122
>UNIPROTKB|E1BFM3 [details] [associations]
symbol:Bt.62501 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 OMA:EKNREMY GeneTree:ENSGT00390000016384
EMBL:DAAA02051956 IPI:IPI00693404 Ensembl:ENSBTAT00000013301
Uniprot:E1BFM3
Length = 123
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 68/122 (55%), Positives = 89/122 (72%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA
Sbjct: 61 TNQTQKENLRKFYKGKKYEPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>RGD|1586622 [details] [associations]
symbol:LOC686074 "similar to 60S ribosomal protein L35"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
HAMAP:MF_00374 RGD:1586622 RGD:1589358 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384 OrthoDB:EOG45QHFR
IPI:IPI00363291 RefSeq:XP_001066433.3 RefSeq:XP_002725386.2
Ensembl:ENSRNOT00000051911 GeneID:686074 KEGG:rno:686074
OMA:QLLMAKV Uniprot:D3ZN79
Length = 123
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 65/122 (53%), Positives = 88/122 (72%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA++K +LR K K + +AKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKMKARDLRGKKKEELLKQLDDLKVEMSQLLMAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+R RLTKH+ LKT++++++E +P+RK+A
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRCRLTKHEEKLKTKKQQRKERLYPLRKHA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>RGD|1589358 [details] [associations]
symbol:LOC681918 "similar to 60S ribosomal protein L35"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
HAMAP:MF_00374 RGD:1586622 RGD:1589358 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384 OrthoDB:EOG45QHFR
IPI:IPI00363291 RefSeq:XP_001066433.3 RefSeq:XP_002725386.2
Ensembl:ENSRNOT00000051911 GeneID:686074 KEGG:rno:686074
OMA:QLLMAKV Uniprot:D3ZN79
Length = 123
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 65/122 (53%), Positives = 88/122 (72%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA++K +LR K K + +AKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKMKARDLRGKKKEELLKQLDDLKVEMSQLLMAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+R RLTKH+ LKT++++++E +P+RK+A
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRCRLTKHEEKLKTKKQQRKERLYPLRKHA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>ASPGD|ASPL0000059648 [details] [associations]
symbol:AN1228 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR001854 Pfam:PF00831 HAMAP:MF_00374
EMBL:BN001308 GO:GO:0006412 GO:GO:0005840 EMBL:AACD01000017
GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
OMA:LRTKSKE OrthoDB:EOG4GTPPM RefSeq:XP_658832.1
ProteinModelPortal:Q5BE02 SMR:Q5BE02 STRING:Q5BE02
EnsemblFungi:CADANIAT00001396 GeneID:2877009 KEGG:ani:AN1228.2
Uniprot:Q5BE02
Length = 124
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 65/121 (53%), Positives = 87/121 (71%)
Query: 2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
+++K +L KSK + RV K+TGGA +K +I VR SIA+VLTVI
Sbjct: 3 SKVKAGQLWGKSKDELTKQLDELKTELAQLRVQKITGGASSKSLRIHDVRKSIARVLTVI 62
Query: 62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAI 121
+ Q++ LR YKNKK+LPLDLRP+ TRA+RRRLTKH+A+LKTER++K+E++FP RKYAI
Sbjct: 63 NANQRSQLRLFYKNKKYLPLDLRPRLTRALRRRLTKHEATLKTERQRKKEIHFPQRKYAI 122
Query: 122 K 122
K
Sbjct: 123 K 123
>ZFIN|ZDB-GENE-020419-2 [details] [associations]
symbol:rpl35 "ribosomal protein L35" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0009790 "embryo development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IMP] InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
ZFIN:ZDB-GENE-020419-2 GO:GO:0006412 GO:GO:0005840 GO:GO:0009790
GO:GO:0051726 GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
GeneTree:ENSGT00390000016384 CTD:11224 HOVERGEN:HBG000862
OrthoDB:EOG45QHFR EMBL:AF506205 EMBL:BC055640 IPI:IPI00494766
RefSeq:NP_775340.1 UniGene:Dr.119727 ProteinModelPortal:Q8JHJ1
SMR:Q8JHJ1 STRING:Q8JHJ1 PRIDE:Q8JHJ1 Ensembl:ENSDART00000009241
GeneID:192299 KEGG:dre:192299 InParanoid:Q8JHJ1 NextBio:20797140
Bgee:Q8JHJ1 Uniprot:Q8JHJ1
Length = 123
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 66/122 (54%), Positives = 87/122 (71%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+ +L T++ +++ + +RK+A
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSIRKFA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>RGD|1563157 [details] [associations]
symbol:RGD1563157 "similar to 60S ribosomal protein L35"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
HAMAP:MF_00374 RGD:1563157 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384 OrthoDB:EOG45QHFR
IPI:IPI00360383 RefSeq:XP_001074453.1 RefSeq:XP_233992.1
PRIDE:D3ZB50 Ensembl:ENSRNOT00000041376 GeneID:298910
KEGG:rno:298910 CTD:298910 NextBio:644495 Uniprot:D3ZB50
Length = 123
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 64/122 (52%), Positives = 87/122 (71%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +L K K + R+AKVTGGA +KLSKI+V+R SIA+VLTV
Sbjct: 1 MAKIKARDLHGKKKEELLKQLDDLKVEPSQFRIAKVTGGAMSKLSKIRVLRKSIARVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTK + L+T++++++E +P+RK A
Sbjct: 61 INQIQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKLEERLETKKQQRKERLYPLRKCA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>POMBASE|SPCC613.05c [details] [associations]
symbol:rpl35 "60S ribosomal protein L35" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
PomBase:SPCC613.05c GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918 OMA:LRTKSKE
PIR:T41471 RefSeq:NP_587693.1 ProteinModelPortal:O74904 SMR:O74904
IntAct:O74904 STRING:O74904 PRIDE:O74904 EnsemblFungi:SPCC613.05c.1
GeneID:2539308 KEGG:spo:SPCC613.05c OrthoDB:EOG4GTPPM
NextBio:20800474 Uniprot:O74904
Length = 122
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/119 (50%), Positives = 82/119 (68%)
Query: 4 IKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ 63
+K ELR++S+ + RV K+ GG+ +KLSKIK R IA++LTVI++
Sbjct: 3 LKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINE 62
Query: 64 KQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 122
+ A REAYKNKK++PLDLR KKTRAIRR LT ++ S KT ++ K+E YFP+RKYA+K
Sbjct: 63 SNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKKERYFPLRKYALK 121
>FB|FBgn0029785 [details] [associations]
symbol:RpL35 "Ribosomal protein L35" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374
GO:GO:0051298 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 ChiTaRS:RPL35 EMBL:AY118364
ProteinModelPortal:Q8MT59 SMR:Q8MT59 STRING:Q8MT59 PRIDE:Q8MT59
FlyBase:FBgn0029785 InParanoid:Q8MT59 OrthoDB:EOG444J2X
ArrayExpress:Q8MT59 Bgee:Q8MT59 Uniprot:Q8MT59
Length = 123
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 61/122 (50%), Positives = 81/122 (66%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M ++K ELR K K + RVAKVTGG+P+KLSKI+VVR +IA+V V
Sbjct: 1 MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
+ QKQK LR+ +KNKK+ PLDLR KKTRAIR+ L+ A+ KT +E ++ FP RK+A
Sbjct: 61 MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>UNIPROTKB|F1LUA5 [details] [associations]
symbol:F1LUA5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001854
Pfam:PF00831 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
IPI:IPI00391998 Ensembl:ENSRNOT00000036284 Uniprot:F1LUA5
Length = 121
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 57/123 (46%), Positives = 81/123 (65%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
+A++K +LR K + VAKVTGG +KLSKI+V R IA VL +
Sbjct: 1 VAKVKARQLRVKK--EELMKQDSLKVELSQFPVAKVTGGGASKLSKIRVERKPIACVLAI 58
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK K++ LDLRPKKTRA+RR+L KHQ LKT+++ ++E+ +P+R+Y
Sbjct: 59 INQTQKKNLRKLYKGKEYKTLDLRPKKTRAVRRQLAKHQEKLKTKKQPRKELMYPLRQYT 118
Query: 121 IKV 123
+KV
Sbjct: 119 VKV 121
>UNIPROTKB|F1M6G3 [details] [associations]
symbol:F1M6G3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310
SUPFAM:SSF46561 TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384
IPI:IPI00361408 Ensembl:ENSRNOT00000004213 OMA:LYPLRTS
Uniprot:F1M6G3
Length = 118
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 59/110 (53%), Positives = 77/110 (70%)
Query: 8 ELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKA 67
+LR K + + RVAKVTGGA +KLSKI+VVR SIA+VLTV SQ QK
Sbjct: 3 DLRGKKEEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVNSQTQKE 62
Query: 68 ALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMR 117
LR+ +K KK+ PLDLRPKKT A+RRRLTKH+ LKT++++ +E +P+R
Sbjct: 63 NLRKFFKGKKYKPLDLRPKKTGAMRRRLTKHEEKLKTKKQQWKERLYPLR 112
>RGD|1564550 [details] [associations]
symbol:RGD1564550 "similar to 60S ribosomal protein L35"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001854 Pfam:PF00831 HAMAP:MF_00374 RGD:1564550
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310
SUPFAM:SSF46561 TIGRFAMs:TIGR00012 GeneTree:ENSGT00390000016384
OrthoDB:EOG45QHFR IPI:IPI00370775 RefSeq:XP_001081254.3
RefSeq:XP_220862.5 Ensembl:ENSRNOT00000042211 GeneID:287623
KEGG:rno:287623 CTD:287623 Uniprot:D3ZTG8
Length = 123
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 58/123 (47%), Positives = 81/123 (65%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K + + RV+KVTG A ++LSKI+VV I VLT+
Sbjct: 1 MAKIKAQDLRSKEEEELLKQLGDLKVELSQLRVSKVTGRALSRLSKIRVVCKFIVWVLTI 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ YK KK+ PLDLRP K RA+RR LTK + L+T++++ +E +P+RKYA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPSKIRAMRRHLTKPEEKLETKKQQWKEWLYPLRKYA 120
Query: 121 IKV 123
+KV
Sbjct: 121 VKV 123
>SGD|S000002350 [details] [associations]
symbol:RPL35A "Ribosomal 60S subunit protein L35A"
species:4932 "Saccharomyces cerevisiae" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
SGD:S000002350 EMBL:BK006938 GO:GO:0003735 GO:GO:0030687
GO:GO:0002181 EMBL:X83276 PDB:4B6A PDBsum:4B6A GO:GO:0000463
GO:GO:0022625 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I PDB:2WW9 PDB:2WWA PDBsum:2WW9
PDBsum:2WWA KO:K02918 EMBL:M82913 EMBL:Z74239 PIR:S30770
RefSeq:NP_010090.1 RefSeq:NP_010145.1 ProteinModelPortal:P0CX84
SMR:P0CX84 EnsemblFungi:YDL136W EnsemblFungi:YDL191W GeneID:851336
GeneID:851419 KEGG:sce:YDL136W KEGG:sce:YDL191W CYGD:YDL191w
EvolutionaryTrace:P0CX84 NextBio:968405 ArrayExpress:P0CX84
GermOnline:YDL191W Uniprot:P0CX84
Length = 120
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 60/122 (49%), Positives = 81/122 (66%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K +ELR KSK +V K++ P+ L KIK VR SIA VLTV
Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLS--RPS-LPKIKTVRKSIACVLTV 57
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +AS TE+++K+++ FP RKYA
Sbjct: 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYA 117
Query: 121 IK 122
IK
Sbjct: 118 IK 119
>SGD|S000002295 [details] [associations]
symbol:RPL35B "Ribosomal 60S subunit protein L35B"
species:4932 "Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001854
InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579 SGD:S000002295
EMBL:BK006938 GO:GO:0003735 GO:GO:0030687 GO:GO:0002181 EMBL:X96876
GO:GO:0000463 GO:GO:0022625 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 KO:K02918 PIR:S30770 RefSeq:NP_010090.1
RefSeq:NP_010145.1 EnsemblFungi:YDL136W EnsemblFungi:YDL191W
GeneID:851336 GeneID:851419 KEGG:sce:YDL136W KEGG:sce:YDL191W
NextBio:968405 EMBL:L02328 EMBL:Z74184 ProteinModelPortal:P0CX85
SMR:P0CX85 CYGD:YDL136w GeneTree:ENSGT00390000016384
ArrayExpress:P0CX85 GermOnline:YDL136W Uniprot:P0CX85
Length = 120
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 60/122 (49%), Positives = 81/122 (66%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA +K +ELR KSK +V K++ P+ L KIK VR SIA VLTV
Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLS--RPS-LPKIKTVRKSIACVLTV 57
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +AS TE+++K+++ FP RKYA
Sbjct: 58 INEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYA 117
Query: 121 IK 122
IK
Sbjct: 118 IK 119
>WB|WBGene00004449 [details] [associations]
symbol:rpl-35 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0000003 GO:GO:0005840 GO:GO:0003735
EMBL:FO080278 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 eggNOG:COG0255 HOGENOM:HOG000207749 KO:K02918
OMA:LRTKSKE GeneTree:ENSGT00390000016384 PIR:S44905
RefSeq:NP_498702.1 ProteinModelPortal:P34662 SMR:P34662
DIP:DIP-24880N MINT:MINT-1056742 STRING:P34662 PaxDb:P34662
EnsemblMetazoa:ZK652.4.1 EnsemblMetazoa:ZK652.4.2
EnsemblMetazoa:ZK652.4.3 GeneID:176097 KEGG:cel:CELE_ZK652.4
UCSC:ZK652.4.1 CTD:176097 WormBase:ZK652.4 InParanoid:P34662
NextBio:891104 Uniprot:P34662
Length = 123
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 56/122 (45%), Positives = 80/122 (65%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M ++K LR + K RV+KVTGGA +KLSKI+VVR +IA++LTV
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q QK LR+ Y + K+ P+DLR KKTRAIRRRLT H+ SL++ +++ + +RK+A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 121 IK 122
+K
Sbjct: 121 VK 122
>UNIPROTKB|G4MSD2 [details] [associations]
symbol:MGG_04455 "60S ribosomal protein L35" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001854 Pfam:PF00831 HAMAP:MF_00374
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0043581
EMBL:CM001232 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 RefSeq:XP_003713551.1 ProteinModelPortal:G4MSD2
SMR:G4MSD2 EnsemblFungi:MGG_04455T0 GeneID:2678153
KEGG:mgr:MGG_04455 Uniprot:G4MSD2
Length = 125
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 54/121 (44%), Positives = 72/121 (59%)
Query: 2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
+++K L K K + R+ K+ KL+KI +R SIA+VLTVI
Sbjct: 4 SKVKAGALWGKDKDELLKQLNELKTELNQLRIQKIASSG-TKLTKIHDIRKSIARVLTVI 62
Query: 62 SQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAI 121
+ KQ+ LR YKNKK+LPLDLR K+TRAIRRRL+K AS E+ KKR+ +F R Y +
Sbjct: 63 NLKQRQQLRLFYKNKKYLPLDLRAKQTRAIRRRLSKEDASRVLEKTKKRQQHFSQRNYFV 122
Query: 122 K 122
K
Sbjct: 123 K 123
>RGD|1593195 [details] [associations]
symbol:LOC367050 "similar to 60S ribosomal protein L35"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001854 Pfam:PF00831 RGD:1593195 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 OrthoDB:EOG45QHFR IPI:IPI00370461
RefSeq:XP_002727066.1 RefSeq:XP_345917.1 Ensembl:ENSRNOT00000051023
GeneID:367050 KEGG:rno:367050 UCSC:RGD:1593195 NextBio:690541
Uniprot:D3ZMZ5
Length = 121
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 52/122 (42%), Positives = 76/122 (62%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +L K K + V+KVTGGA +KLSK V+R A VLTV
Sbjct: 1 MAKIKARDLPSKEKEELLKQLEDLKVELSQLCVSKVTGGAASKLSKTGVIRKCSACVLTV 60
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
I+Q Q+ +LR+ YK +K+ PLDL PKKT R LTK + LKT++++++E +P+R+ A
Sbjct: 61 INQTQEESLRKFYKGEKYKPLDLPPKKTT--HRWLTKQEEELKTKKQQQKEWLYPLRRCA 118
Query: 121 IK 122
++
Sbjct: 119 VE 120
>DICTYBASE|DDB_G0288349 [details] [associations]
symbol:rpl35 "S60 ribosomal protein L35"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001854 InterPro:IPR018254 Pfam:PF00831 PROSITE:PS00579
dictyBase:DDB_G0288349 GO:GO:0006412 GenomeReviews:CM000154_GR
GO:GO:0005840 EMBL:AAFI02000111 GO:GO:0003735 Gene3D:1.10.287.310
SUPFAM:SSF46561 TIGRFAMs:TIGR00012 eggNOG:COG0255 KO:K02918
OMA:LRTKSKE RefSeq:XP_636778.1 ProteinModelPortal:Q54J23 SMR:Q54J23
STRING:Q54J23 PRIDE:Q54J23 EnsemblProtists:DDB0231152
GeneID:8626581 KEGG:ddi:DDB_G0288349 ProtClustDB:CLSZ2440708
Uniprot:Q54J23
Length = 126
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 54/122 (44%), Positives = 67/122 (54%)
Query: 3 RIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVIS 62
+ K ELR K+K RVA+V P+KL+KI VR +IA+VLTV +
Sbjct: 4 KTKAFELRTKNKTQLLEHLKELRTELSSLRVAQVKSPNPSKLAKIGTVRKAIARVLTVFN 63
Query: 63 QKQKAALREAYKNKKF--LPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
Q QK LR Y K +P DLR KKTRAIRRRLT Q+ + T R K FP R +A
Sbjct: 64 QTQKNHLRAVYSKKSSSKIPTDLRYKKTRAIRRRLTNKQSKVVTLRVSKTATNFPQRVFA 123
Query: 121 IK 122
+K
Sbjct: 124 VK 125
>GENEDB_PFALCIPARUM|PF11_0260 [details] [associations]
symbol:PF11_0260 "ribosomal protein L35,
putative" species:5833 "Plasmodium falciparum" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001854 Pfam:PF00831
HAMAP:MF_00374 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
GO:GO:0015934 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 HOGENOM:HOG000207749 KO:K02918
ProtClustDB:CLSZ2440708 RefSeq:XP_001347931.2
ProteinModelPortal:Q8IIB4 IntAct:Q8IIB4
EnsemblProtists:PF11_0260:mRNA GeneID:810807 KEGG:pfa:PF11_0260
EuPathDB:PlasmoDB:PF3D7_1124900 Uniprot:Q8IIB4
Length = 124
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 48/121 (39%), Positives = 69/121 (57%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M+ +K +ELR K + R++K G + K SKI VR ++A+VLTV
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
+QK+K LR+ YKNKKF P +LR K T+ R +L+ Q + T R+KK+ FP RKY
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 121 I 121
+
Sbjct: 120 V 120
>UNIPROTKB|Q8IIB4 [details] [associations]
symbol:PF11_0260 "60S ribosomal protein L35, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001854 Pfam:PF00831
HAMAP:MF_00374 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
GO:GO:0015934 Gene3D:1.10.287.310 SUPFAM:SSF46561
TIGRFAMs:TIGR00012 HOGENOM:HOG000207749 KO:K02918
ProtClustDB:CLSZ2440708 RefSeq:XP_001347931.2
ProteinModelPortal:Q8IIB4 IntAct:Q8IIB4
EnsemblProtists:PF11_0260:mRNA GeneID:810807 KEGG:pfa:PF11_0260
EuPathDB:PlasmoDB:PF3D7_1124900 Uniprot:Q8IIB4
Length = 124
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 48/121 (39%), Positives = 69/121 (57%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
M+ +K +ELR K + R++K G + K SKI VR ++A+VLTV
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 61 ISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYA 120
+QK+K LR+ YKNKKF P +LR K T+ R +L+ Q + T R+KK+ FP RKY
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 121 I 121
+
Sbjct: 120 V 120
>UNIPROTKB|F2Z388 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL354928 Gene3D:1.10.287.310
SUPFAM:SSF46561 TIGRFAMs:TIGR00012 HGNC:HGNC:10344 ChiTaRS:RPL35
IPI:IPI01014264 ProteinModelPortal:F2Z388 SMR:F2Z388 PRIDE:F2Z388
Ensembl:ENST00000493018 ArrayExpress:F2Z388 Bgee:F2Z388
Uniprot:F2Z388
Length = 96
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 40/74 (54%), Positives = 48/74 (64%)
Query: 1 MARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
MA+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTV
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 61 ISQKQKAALREAYK 74
I+Q QK LR+ YK
Sbjct: 61 INQTQKENLRKFYK 74
>UNIPROTKB|H0Y3A0 [details] [associations]
symbol:RPL35 "60S ribosomal protein L35" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001854 InterPro:IPR018254
Pfam:PF00831 PROSITE:PS00579 HAMAP:MF_00374 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL354928 Gene3D:1.10.287.310
SUPFAM:SSF46561 TIGRFAMs:TIGR00012 HGNC:HGNC:10344 ChiTaRS:RPL35
ProteinModelPortal:H0Y3A0 PRIDE:H0Y3A0 Ensembl:ENST00000373570
Bgee:H0Y3A0 Uniprot:H0Y3A0
Length = 96
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 39/73 (53%), Positives = 47/73 (64%)
Query: 2 ARIKVHELRQKSKVDXXXXXXXXXXXXXXXRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
A+IK +LR K K + RVAKVTGGA +KLSKI+VVR SIA+VLTVI
Sbjct: 2 AKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVI 61
Query: 62 SQKQKAALREAYK 74
+Q QK LR+ YK
Sbjct: 62 NQTQKENLRKFYK 74
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.131 0.345 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 123 108 0.00091 102 3 10 22 0.39 30
29 0.40 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 507 (54 KB)
Total size of DFA: 111 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.28u 0.09s 16.37t Elapsed: 00:00:01
Total cpu time: 16.28u 0.09s 16.37t Elapsed: 00:00:01
Start: Fri May 10 21:09:36 2013 End: Fri May 10 21:09:37 2013