Query 033269
Match_columns 123
No_of_seqs 130 out of 1041
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 19:43:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033269.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033269hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iv0_A Hypothetical protein; r 100.0 3.2E-29 1.1E-33 173.7 7.9 84 35-122 1-94 (98)
2 1nu0_A Hypothetical protein YQ 100.0 1.1E-28 3.8E-33 180.2 8.8 86 34-122 2-97 (138)
3 1vhx_A Putative holliday junct 99.9 2.1E-24 7.1E-29 159.0 8.9 85 35-122 3-99 (150)
4 4ep4_A Crossover junction endo 98.6 1.9E-07 6.5E-12 69.6 9.8 83 35-120 1-106 (166)
5 1hjr_A Holliday junction resol 98.2 9.5E-06 3.2E-10 59.8 8.9 82 35-119 1-101 (158)
6 3bzc_A TEX; helix-turn-helix, 98.0 2.5E-05 8.4E-10 70.0 9.8 99 20-122 313-422 (785)
7 3psf_A Transcription elongatio 97.5 0.00041 1.4E-08 63.8 9.9 83 35-122 519-623 (1030)
8 3psi_A Transcription elongatio 97.4 0.00065 2.2E-08 63.4 9.9 83 35-122 516-620 (1219)
9 3epq_A Putative fructokinase; 96.0 0.0099 3.4E-07 46.6 5.6 82 35-120 3-105 (302)
10 2ch5_A NAGK protein; transfera 95.8 0.066 2.3E-06 41.6 9.4 81 36-120 7-109 (347)
11 3vgl_A Glucokinase; ROK family 95.8 0.0099 3.4E-07 46.5 4.6 83 34-120 1-104 (321)
12 2e2o_A Hexokinase; acetate and 95.7 0.054 1.8E-06 41.4 8.5 82 34-120 1-94 (299)
13 3vov_A Glucokinase, hexokinase 95.3 0.022 7.5E-07 44.3 4.9 81 35-120 1-106 (302)
14 2qm1_A Glucokinase; alpha-beta 95.1 0.029 1E-06 43.2 5.0 85 32-120 2-116 (326)
15 2gup_A ROK family protein; sug 94.5 0.056 1.9E-06 41.2 5.3 80 36-120 5-102 (292)
16 3r6m_A YEAZ, resuscitation pro 94.2 0.16 5.6E-06 38.5 7.3 81 35-119 2-93 (213)
17 4htl_A Beta-glucoside kinase; 94.1 0.13 4.4E-06 39.7 6.6 82 35-120 4-105 (297)
18 2ap1_A Putative regulator prot 94.0 0.091 3.1E-06 40.7 5.6 86 31-120 20-128 (327)
19 1saz_A Probable butyrate kinas 94.0 0.23 7.9E-06 39.9 8.2 82 34-121 1-129 (381)
20 4db3_A Glcnac kinase, N-acetyl 93.9 0.12 4.3E-06 40.4 6.3 86 31-120 20-128 (327)
21 3htv_A D-allose kinase, alloki 93.9 0.16 5.6E-06 39.5 6.9 82 35-120 7-115 (310)
22 3mcp_A Glucokinase; structural 92.8 0.31 1E-05 39.5 7.1 83 34-120 8-116 (366)
23 3djc_A Type III pantothenate k 92.8 0.37 1.3E-05 37.6 7.4 80 34-120 1-90 (266)
24 2gel_A Putative GRAM negative 92.2 0.77 2.6E-05 34.7 8.3 81 36-120 2-93 (231)
25 2aa4_A Mannac kinase, putative 91.8 0.27 9.2E-06 37.2 5.3 82 35-120 1-104 (289)
26 1sz2_A Glucokinase, glucose ki 91.4 0.54 1.8E-05 36.6 6.8 81 34-120 13-110 (332)
27 2ivn_A O-sialoglycoprotein end 91.4 0.75 2.5E-05 36.3 7.7 84 35-121 1-107 (330)
28 2q2r_A Glucokinase 1, putative 90.8 0.44 1.5E-05 37.7 5.8 84 34-120 28-136 (373)
29 2a6a_A Hypothetical protein TM 90.1 1.6 5.4E-05 33.0 8.2 82 35-120 12-104 (218)
30 2hoe_A N-acetylglucosamine kin 90.1 0.44 1.5E-05 37.9 5.3 82 35-120 87-196 (380)
31 1z6r_A MLC protein; transcript 89.9 0.58 2E-05 37.3 5.8 82 35-120 85-194 (406)
32 1woq_A Inorganic polyphosphate 89.7 0.75 2.6E-05 34.6 6.1 83 35-120 12-122 (267)
33 1z05_A Transcriptional regulat 89.4 0.51 1.7E-05 38.2 5.2 83 34-120 107-216 (429)
34 3r8e_A Hypothetical sugar kina 88.4 1 3.5E-05 34.8 6.2 85 33-120 17-126 (321)
35 3eno_A Putative O-sialoglycopr 87.7 1.8 6E-05 34.4 7.2 84 34-120 5-111 (334)
36 3en9_A Glycoprotease, O-sialog 87.1 1.7 5.7E-05 36.3 7.0 84 34-120 5-110 (540)
37 2yhw_A Bifunctional UDP-N-acet 86.9 1 3.6E-05 34.9 5.4 86 31-120 26-139 (343)
38 1dkg_D Molecular chaperone DNA 85.5 0.4 1.4E-05 37.6 2.4 21 34-54 1-21 (383)
39 4ehu_A Activator of 2-hydroxyi 83.8 1.1 3.6E-05 33.7 4.0 26 35-60 1-26 (276)
40 3h1q_A Ethanolamine utilizatio 83.7 7.8 0.00027 28.5 8.7 80 35-118 28-124 (272)
41 3lm2_A Putative kinase; struct 83.6 1.3 4.5E-05 33.4 4.4 54 35-93 6-65 (226)
42 2h3g_X Biosynthetic protein; p 83.0 6.5 0.00022 30.3 8.3 77 37-120 2-89 (268)
43 1zc6_A Probable N-acetylglucos 82.3 1.8 6.2E-05 33.0 4.8 24 36-59 12-35 (305)
44 1t6c_A Exopolyphosphatase; alp 82.0 4.5 0.00015 31.8 7.1 86 32-120 9-118 (315)
45 4b9q_A Chaperone protein DNAK; 81.6 1.1 3.8E-05 38.2 3.7 21 34-54 1-21 (605)
46 3qfu_A 78 kDa glucose-regulate 79.8 1.2 4.2E-05 34.7 3.1 22 34-55 17-38 (394)
47 1yuw_A Heat shock cognate 71 k 79.3 1.2 4.2E-05 37.4 3.1 22 34-55 3-24 (554)
48 3i33_A Heat shock-related 70 k 78.8 1.3 4.3E-05 35.0 2.9 22 34-55 22-43 (404)
49 3d2f_A Heat shock protein homo 78.7 1.1 3.8E-05 38.9 2.8 22 34-55 1-22 (675)
50 1zxo_A Conserved hypothetical 78.3 1.8 6.2E-05 32.9 3.6 79 37-120 2-94 (291)
51 2v7y_A Chaperone protein DNAK; 78.2 1.7 5.8E-05 36.0 3.6 22 34-55 1-22 (509)
52 3bex_A Type III pantothenate k 78.1 11 0.00036 28.7 7.9 70 36-109 4-81 (249)
53 4gni_A Putative heat shock pro 77.5 1.6 5.5E-05 34.6 3.1 19 35-53 13-31 (409)
54 2kho_A Heat shock protein 70; 76.9 1.5 5E-05 37.4 2.9 22 34-55 1-22 (605)
55 2yhx_A Hexokinase B; transfera 74.6 1.9 6.5E-05 36.0 3.0 30 29-58 55-84 (457)
56 1zbs_A Hypothetical protein PG 74.5 3.6 0.00012 31.2 4.4 79 37-120 2-96 (291)
57 1hux_A Activator of (R)-2-hydr 71.8 4.3 0.00015 30.9 4.2 26 35-60 3-28 (270)
58 3mdq_A Exopolyphosphatase; str 71.5 13 0.00046 28.9 7.1 83 35-120 4-110 (315)
59 4bc3_A Xylulose kinase; transf 70.9 4.3 0.00015 33.9 4.3 29 30-58 5-33 (538)
60 2ych_A Competence protein PILM 68.2 14 0.00046 28.6 6.5 58 35-92 13-85 (377)
61 1jmv_A USPA, universal stress 67.8 14 0.00047 23.9 5.6 45 73-121 93-138 (141)
62 3nkl_A UDP-D-quinovosamine 4-d 67.1 13 0.00044 24.5 5.4 43 73-119 56-98 (141)
63 3cer_A Possible exopolyphospha 65.9 14 0.00049 29.3 6.2 80 33-120 14-123 (343)
64 3ifr_A Carbohydrate kinase, FG 65.5 5.8 0.0002 32.9 4.0 28 32-59 4-31 (508)
65 2p3r_A Glycerol kinase; glycer 65.1 6.9 0.00023 32.4 4.4 26 34-59 2-27 (510)
66 3l0q_A Xylulose kinase; xlylul 64.7 6.9 0.00024 32.7 4.3 26 34-59 4-29 (554)
67 3hi0_A Putative exopolyphospha 64.5 24 0.00082 29.4 7.6 86 32-120 12-121 (508)
68 3g25_A Glycerol kinase; IDP007 63.2 7.9 0.00027 31.9 4.4 28 32-59 2-30 (501)
69 3ll3_A Gluconate kinase; xylul 63.1 7.2 0.00024 32.3 4.1 26 34-59 3-28 (504)
70 3hz6_A Xylulokinase; xylulose, 62.7 7.7 0.00026 32.1 4.2 26 34-59 4-29 (511)
71 1bdg_A Hexokinase; phosphotran 62.4 4.9 0.00017 33.3 3.0 23 34-56 67-89 (451)
72 1kcf_A Hypothetical 30.2 KD pr 62.2 6.5 0.00022 30.6 3.5 22 33-54 38-59 (258)
73 2w40_A Glycerol kinase, putati 60.4 8.5 0.00029 31.6 4.1 25 34-58 3-27 (503)
74 3h3n_X Glycerol kinase; ATP-bi 59.7 11 0.00037 31.1 4.6 26 34-59 4-29 (506)
75 2dpn_A Glycerol kinase; thermu 59.6 8.1 0.00028 31.7 3.8 25 34-58 1-25 (495)
76 1jce_A ROD shape-determining p 58.9 5.1 0.00017 30.8 2.3 19 35-53 3-21 (344)
77 4e1j_A Glycerol kinase; struct 58.6 10 0.00035 31.5 4.3 24 36-59 27-50 (520)
78 1u6z_A Exopolyphosphatase; alp 58.3 18 0.00061 30.2 5.7 84 34-120 10-117 (513)
79 3i8b_A Xylulose kinase; strain 57.5 12 0.00041 31.1 4.6 56 34-90 4-72 (515)
80 2zf5_O Glycerol kinase; hypert 55.7 12 0.00041 30.7 4.2 24 35-58 3-26 (497)
81 2uyt_A Rhamnulokinase; rhamnos 55.6 6.8 0.00023 31.9 2.7 24 34-57 3-26 (489)
82 3h6e_A Carbohydrate kinase, FG 55.4 8.4 0.00029 31.9 3.2 26 34-59 5-30 (482)
83 3jvp_A Ribulokinase; PSI-II, N 54.2 13 0.00043 31.3 4.2 25 34-58 4-29 (572)
84 3o8m_A Hexokinase; rnaseh-like 52.3 5.4 0.00018 33.7 1.6 25 33-57 78-102 (485)
85 3cet_A Conserved archaeal prot 52.0 38 0.0013 27.4 6.5 76 36-120 1-91 (334)
86 3ezw_A Glycerol kinase; glycer 50.5 16 0.00055 30.2 4.2 26 34-59 3-28 (526)
87 2f9w_A Pantothenate kinase; CO 48.8 44 0.0015 25.8 6.2 75 35-119 23-102 (271)
88 3thx_A DNA mismatch repair pro 48.2 44 0.0015 30.3 6.9 53 35-89 145-202 (934)
89 3vdp_A Recombination protein R 47.8 26 0.00089 26.7 4.6 52 58-109 124-177 (212)
90 2fz5_A Flavodoxin; alpha/beta 46.2 29 0.00098 22.4 4.2 34 82-117 46-84 (137)
91 2ekc_A AQ_1548, tryptophan syn 45.0 43 0.0015 25.2 5.6 45 73-119 35-100 (262)
92 3f6c_A Positive transcription 44.6 52 0.0018 20.4 5.2 42 73-119 37-80 (134)
93 3fdx_A Putative filament prote 42.6 17 0.00057 23.5 2.6 44 73-119 97-142 (143)
94 3vk5_A MOEO5; TIM barrel, tran 42.1 43 0.0015 26.5 5.3 44 73-120 57-104 (286)
95 2z08_A Universal stress protei 41.2 23 0.0008 22.8 3.1 44 73-119 90-136 (137)
96 2dum_A Hypothetical protein PH 40.3 32 0.0011 23.0 3.8 46 73-121 108-156 (170)
97 2d4w_A Glycerol kinase; alpha 40.0 30 0.001 28.4 4.2 23 36-58 3-25 (504)
98 2bdq_A Copper homeostasis prot 39.6 42 0.0014 25.6 4.7 35 77-118 84-123 (224)
99 3eod_A Protein HNR; response r 38.8 61 0.0021 20.0 4.8 42 73-119 42-85 (130)
100 4a2a_A Cell division protein F 38.8 89 0.0031 25.1 6.9 58 35-92 8-85 (419)
101 1cza_N Hexokinase type I; stru 38.6 11 0.00037 34.0 1.4 24 34-57 77-100 (917)
102 2yyb_A Hypothetical protein TT 37.8 96 0.0033 23.2 6.5 94 14-121 135-238 (242)
103 1b5f_B Protein (cardosin A); h 37.4 30 0.001 21.4 3.1 16 37-52 71-86 (87)
104 3hdg_A Uncharacterized protein 37.0 62 0.0021 20.2 4.7 42 73-119 42-85 (137)
105 3i42_A Response regulator rece 36.9 72 0.0025 19.5 5.0 42 73-119 38-83 (127)
106 3hm8_A Hexokinase-3; glucose, 36.6 18 0.0006 30.3 2.3 29 29-57 53-81 (445)
107 2gm3_A Unknown protein; AT3G01 36.0 47 0.0016 22.3 4.1 45 73-120 115-162 (175)
108 4e7p_A Response regulator; DNA 35.7 65 0.0022 20.6 4.7 42 73-119 57-100 (150)
109 2itm_A Xylulose kinase, xylulo 35.5 36 0.0012 27.6 4.0 22 37-58 2-23 (484)
110 3hv2_A Response regulator/HD d 35.4 73 0.0025 20.4 4.9 43 73-120 49-93 (153)
111 3hgm_A Universal stress protei 35.3 26 0.00088 22.6 2.6 44 73-119 101-147 (147)
112 1cza_N Hexokinase type I; stru 34.6 19 0.00065 32.4 2.3 25 31-55 522-546 (917)
113 2rjn_A Response regulator rece 34.5 67 0.0023 20.6 4.6 42 73-119 42-85 (154)
114 3eul_A Possible nitrate/nitrit 34.4 80 0.0027 20.1 5.0 42 73-119 52-95 (152)
115 2e6m_A Werner syndrome ATP-dep 34.1 1.2E+02 0.0041 21.3 6.3 69 14-89 23-103 (208)
116 2qxy_A Response regulator; reg 34.0 84 0.0029 19.6 5.0 43 73-119 39-81 (142)
117 1twd_A Copper homeostasis prot 33.8 45 0.0016 25.9 4.1 35 77-118 81-120 (256)
118 1q77_A Hypothetical protein AQ 33.7 17 0.00058 23.4 1.5 38 73-119 100-137 (138)
119 1qop_A Tryptophan synthase alp 33.3 71 0.0024 24.0 5.1 44 73-118 35-99 (268)
120 3ih5_A Electron transfer flavo 33.1 51 0.0017 24.3 4.2 33 73-109 82-114 (217)
121 3l21_A DHDPS, dihydrodipicolin 33.0 70 0.0024 24.7 5.2 45 73-120 101-148 (304)
122 3obw_A Protein pelota homolog; 33.0 74 0.0025 25.6 5.4 85 21-109 135-229 (364)
123 1mjh_A Protein (ATP-binding do 32.6 40 0.0014 22.2 3.3 46 73-121 111-159 (162)
124 3grc_A Sensor protein, kinase; 32.5 92 0.0031 19.4 5.1 43 73-120 41-87 (140)
125 3cz5_A Two-component response 32.3 99 0.0034 19.7 5.2 42 73-119 42-85 (153)
126 3b2n_A Uncharacterized protein 32.2 90 0.0031 19.4 4.9 42 73-119 40-83 (133)
127 1tq8_A Hypothetical protein RV 32.1 45 0.0015 22.5 3.5 46 73-121 110-158 (163)
128 3vzx_A Heptaprenylglyceryl pho 32.0 1E+02 0.0035 23.3 5.8 38 78-119 27-65 (228)
129 3daq_A DHDPS, dihydrodipicolin 31.0 69 0.0024 24.5 4.8 45 73-120 88-135 (292)
130 1xky_A Dihydrodipicolinate syn 30.8 86 0.0029 24.1 5.3 45 73-120 98-145 (301)
131 4ijn_A Acetate kinase, acetoki 30.8 41 0.0014 27.8 3.6 37 21-57 9-45 (398)
132 3flu_A DHDPS, dihydrodipicolin 30.7 82 0.0028 24.1 5.2 45 73-120 93-140 (297)
133 3gv0_A Transcriptional regulat 30.6 41 0.0014 24.3 3.3 40 73-121 57-97 (288)
134 3f9m_A Glucokinase; hexokinase 30.5 26 0.00089 29.5 2.4 28 29-56 71-98 (470)
135 3qze_A DHDPS, dihydrodipicolin 30.2 83 0.0028 24.4 5.2 45 73-120 109-156 (314)
136 2zay_A Response regulator rece 29.7 1.1E+02 0.0036 19.3 5.5 42 73-119 43-88 (147)
137 3cu5_A Two component transcrip 29.7 93 0.0032 19.7 4.7 42 73-119 40-83 (141)
138 3kht_A Response regulator; PSI 29.4 1E+02 0.0035 19.3 4.8 43 73-120 42-88 (144)
139 3tak_A DHDPS, dihydrodipicolin 29.2 86 0.0029 23.9 5.0 45 73-120 87-134 (291)
140 3m5v_A DHDPS, dihydrodipicolin 29.1 89 0.003 24.0 5.1 45 73-120 94-141 (301)
141 2qr3_A Two-component system re 29.1 77 0.0026 19.7 4.1 45 73-119 38-86 (140)
142 2vc6_A MOSA, dihydrodipicolina 29.0 90 0.0031 23.8 5.1 45 73-120 86-133 (292)
143 1t0i_A YLR011WP; FMN binding p 28.9 33 0.0011 23.8 2.4 26 82-107 84-112 (191)
144 3s3t_A Nucleotide-binding prot 28.5 37 0.0013 21.8 2.5 44 73-119 98-145 (146)
145 2ehh_A DHDPS, dihydrodipicolin 28.1 97 0.0033 23.6 5.2 45 73-120 86-133 (294)
146 3eb2_A Putative dihydrodipicol 28.0 1.1E+02 0.0037 23.5 5.5 45 73-120 90-137 (300)
147 3jte_A Response regulator rece 28.0 1.1E+02 0.0038 19.1 4.8 42 73-119 38-83 (143)
148 3na8_A Putative dihydrodipicol 27.8 1.1E+02 0.0039 23.6 5.6 45 73-120 110-157 (315)
149 2ews_A Pantothenate kinase; PA 27.7 1.5E+02 0.0051 22.9 6.2 49 35-88 20-69 (287)
150 3si9_A DHDPS, dihydrodipicolin 27.6 96 0.0033 24.1 5.1 45 73-120 108-155 (315)
151 3e96_A Dihydrodipicolinate syn 27.4 82 0.0028 24.4 4.7 45 73-120 97-144 (316)
152 3cpr_A Dihydrodipicolinate syn 27.3 1E+02 0.0035 23.7 5.2 45 73-120 102-149 (304)
153 2rdm_A Response regulator rece 27.2 1E+02 0.0036 18.7 4.5 45 73-119 40-85 (132)
154 3hzh_A Chemotaxis response reg 27.2 1.2E+02 0.004 19.6 4.9 43 73-120 72-118 (157)
155 2v9d_A YAGE; dihydrodipicolini 27.0 1E+02 0.0034 24.3 5.2 45 73-120 117-164 (343)
156 1o5k_A DHDPS, dihydrodipicolin 26.9 1E+02 0.0035 23.7 5.2 45 73-120 98-145 (306)
157 2yxg_A DHDPS, dihydrodipicolin 26.7 99 0.0034 23.5 5.0 45 73-120 86-133 (289)
158 1wb9_A DNA mismatch repair pro 26.7 1.3E+02 0.0046 26.5 6.4 53 32-89 128-181 (800)
159 3nyi_A FAT acid-binding protei 26.7 1.2E+02 0.0042 23.3 5.6 47 73-122 76-125 (297)
160 3qk7_A Transcriptional regulat 26.4 1.2E+02 0.0042 21.8 5.3 41 73-121 56-96 (294)
161 2jfn_A Glutamate racemase; cel 26.4 1E+02 0.0035 23.3 5.0 36 77-119 79-114 (285)
162 2ark_A Flavodoxin; FMN, struct 26.3 58 0.002 22.6 3.3 26 82-107 52-80 (188)
163 3dlo_A Universal stress protei 26.0 35 0.0012 22.9 2.1 44 73-119 108-154 (155)
164 3h75_A Periplasmic sugar-bindi 25.9 79 0.0027 23.5 4.2 42 73-121 52-94 (350)
165 1tmy_A CHEY protein, TMY; chem 25.8 1.1E+02 0.0039 18.3 5.1 42 73-119 38-81 (120)
166 3nhm_A Response regulator; pro 25.7 1.2E+02 0.0041 18.6 5.6 42 73-119 38-83 (133)
167 3dz1_A Dihydrodipicolinate syn 25.7 1.1E+02 0.0039 23.5 5.2 45 73-120 93-141 (313)
168 2r91_A 2-keto-3-deoxy-(6-phosp 25.5 1.1E+02 0.0037 23.3 5.0 45 73-120 81-129 (286)
169 1f6k_A N-acetylneuraminate lya 25.5 1E+02 0.0035 23.5 4.9 45 73-120 90-137 (293)
170 3l49_A ABC sugar (ribose) tran 25.3 1.6E+02 0.0055 20.8 5.7 39 77-121 56-94 (291)
171 1w3i_A EDA, 2-keto-3-deoxy glu 25.3 1.1E+02 0.0036 23.4 4.9 45 73-120 82-130 (293)
172 2ojp_A DHDPS, dihydrodipicolin 25.3 1E+02 0.0035 23.5 4.8 45 73-120 87-134 (292)
173 1srr_A SPO0F, sporulation resp 25.2 1.2E+02 0.0041 18.4 4.9 42 73-119 38-81 (124)
174 3d0c_A Dihydrodipicolinate syn 25.2 1.1E+02 0.0037 23.7 5.0 45 73-120 97-144 (314)
175 2rfg_A Dihydrodipicolinate syn 25.1 1E+02 0.0036 23.5 4.9 45 73-120 86-133 (297)
176 3cnb_A DNA-binding response re 24.9 1.3E+02 0.0043 18.6 5.1 42 73-119 45-90 (143)
177 2plg_A TLL0839 protein; hypoth 24.9 1.1E+02 0.0039 22.1 4.7 53 14-66 21-84 (163)
178 3n53_A Response regulator rece 24.6 1.1E+02 0.0038 19.0 4.3 42 73-119 37-82 (140)
179 1qkk_A DCTD, C4-dicarboxylate 24.6 1E+02 0.0034 19.7 4.1 42 73-119 38-81 (155)
180 2r8w_A AGR_C_1641P; APC7498, d 24.4 1.1E+02 0.0039 23.9 5.0 45 73-120 120-167 (332)
181 2wkj_A N-acetylneuraminate lya 24.3 1.1E+02 0.0037 23.5 4.8 45 73-120 97-145 (303)
182 3p0r_A Azoreductase; structura 24.2 89 0.0031 22.4 4.1 34 85-120 8-46 (211)
183 2nuw_A 2-keto-3-deoxygluconate 24.2 1.1E+02 0.0039 23.2 4.9 45 73-120 82-130 (288)
184 1nbw_A Glycerol dehydratase re 24.0 59 0.002 28.4 3.5 22 34-55 1-22 (607)
185 2gzm_A Glutamate racemase; enz 24.0 1.1E+02 0.0037 22.9 4.7 40 73-119 56-95 (267)
186 3ist_A Glutamate racemase; str 23.9 1.1E+02 0.0039 23.2 4.8 39 73-118 58-96 (269)
187 3k4h_A Putative transcriptiona 23.8 58 0.002 23.3 3.0 40 73-121 60-100 (292)
188 3ksm_A ABC-type sugar transpor 23.6 1.1E+02 0.0037 21.4 4.4 43 73-121 50-92 (276)
189 5nul_A Flavodoxin; electron tr 23.6 84 0.0029 20.3 3.6 25 82-106 45-74 (138)
190 2zgy_A Plasmid segregation pro 23.6 83 0.0028 23.7 4.0 20 37-56 2-21 (320)
191 3o3m_A Alpha subunit 2-hydroxy 23.5 85 0.0029 25.2 4.2 45 73-120 325-372 (408)
192 3jy6_A Transcriptional regulat 23.4 86 0.003 22.3 3.9 40 73-121 54-93 (276)
193 3lua_A Response regulator rece 23.4 1.4E+02 0.0048 18.5 4.9 45 73-119 40-87 (140)
194 3f6r_A Flavodoxin; FMN binding 23.3 43 0.0015 22.1 2.1 11 97-107 104-114 (148)
195 1rtt_A Conserved hypothetical 22.9 62 0.0021 22.4 3.0 26 82-107 72-100 (193)
196 1ujp_A Tryptophan synthase alp 22.9 1.5E+02 0.005 22.6 5.3 43 73-119 34-97 (271)
197 2gkg_A Response regulator homo 22.8 1.2E+02 0.0042 18.1 4.1 45 73-119 40-86 (127)
198 1vdd_A Recombination protein R 22.8 1E+02 0.0035 23.6 4.3 51 57-109 109-161 (228)
199 3r6w_A FMN-dependent NADH-azor 22.8 1.2E+02 0.0041 21.3 4.5 34 85-120 5-42 (212)
200 3cg4_A Response regulator rece 22.8 1.2E+02 0.0041 18.8 4.1 42 73-119 42-87 (142)
201 2a5l_A Trp repressor binding p 22.7 57 0.002 22.4 2.7 27 81-107 70-99 (200)
202 3pl5_A SMU_165, putative uncha 22.7 1.7E+02 0.0059 22.9 5.8 47 73-122 107-156 (320)
203 2hmc_A AGR_L_411P, dihydrodipi 22.3 1.3E+02 0.0046 23.7 5.1 45 73-120 109-158 (344)
204 2qsj_A DNA-binding response re 22.3 1.1E+02 0.0036 19.5 3.9 42 73-119 40-84 (154)
205 1ag9_A Flavodoxin; electron tr 22.2 76 0.0026 21.8 3.3 26 82-107 45-74 (175)
206 2oho_A Glutamate racemase; iso 21.9 1.2E+02 0.0043 22.6 4.7 40 73-119 65-104 (273)
207 3a10_A Response regulator; pho 21.8 1.4E+02 0.0046 17.8 5.4 42 73-119 36-79 (116)
208 3w01_A Heptaprenylglyceryl pho 21.6 1.6E+02 0.0056 22.3 5.2 42 73-119 28-70 (235)
209 1zuw_A Glutamate racemase 1; ( 21.5 1.4E+02 0.0048 22.4 4.9 39 73-118 56-95 (272)
210 3cg0_A Response regulator rece 21.5 1.5E+02 0.0051 18.2 4.5 41 73-119 45-88 (140)
211 1efv_A Electron transfer flavo 21.3 1.1E+02 0.0038 23.9 4.4 37 73-116 77-113 (315)
212 1rli_A Trp repressor binding p 21.3 49 0.0017 22.4 2.1 26 81-106 70-98 (184)
213 3tb6_A Arabinose metabolism tr 21.2 1.2E+02 0.0043 21.4 4.4 79 38-121 9-107 (298)
214 3n2q_A Sex pheromone staph-CAM 21.0 82 0.0028 24.8 3.5 38 81-118 86-134 (287)
215 3fkr_A L-2-keto-3-deoxyarabona 20.8 1.7E+02 0.0059 22.5 5.4 45 73-120 94-144 (309)
216 1czn_A Flavodoxin; FMN binding 20.8 48 0.0016 22.4 1.9 24 83-106 47-74 (169)
217 3tnj_A Universal stress protei 20.6 57 0.0019 21.0 2.2 46 73-121 100-147 (150)
218 3crn_A Response regulator rece 20.5 1.6E+02 0.0055 18.1 4.5 42 73-119 38-81 (132)
219 3qfe_A Putative dihydrodipicol 20.3 1.4E+02 0.0048 23.2 4.7 45 73-120 97-146 (318)
220 3cpe_A Terminase, DNA packagin 20.1 2.2E+02 0.0076 23.7 6.2 71 35-109 420-499 (592)
221 3uhf_A Glutamate racemase; str 20.1 1E+02 0.0035 23.7 3.9 39 73-118 77-115 (274)
No 1
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=99.96 E-value=3.2e-29 Score=173.69 Aligned_cols=84 Identities=19% Similarity=0.288 Sum_probs=78.2
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc--ccc-chHHHHhhcCcCeEEEeccCC-ChH------HHHHHHHH
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK--ADQ-ELPQLIEKHKVLGMVVNMPKE-HHE------HVSSFIEQ 104 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~--~~~-~L~~li~~~~i~~iVVGlP~~-dGt------~v~~f~~~ 104 (123)
||+||||||+||||+|+||+.+.+|+|+.++.+.+ .++ .|.+++++|+++.+|||+|++ ||+ .+++|+++
T Consensus 1 mriLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~ 80 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA 80 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCCCEEEEECCCHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHH
T ss_pred CcEEEEEeCCCEEEEEEEeCCCCeeeeeEEEEccCcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHH
Confidence 57999999999999999999999999999997544 457 999999999999999999999 998 99999999
Q ss_pred HhhcccCCCCCEEEecCC
Q 033269 105 LDGNEIYRGLPFCYFQKT 122 (123)
Q Consensus 105 L~~~~~~~~lpV~l~DEr 122 (123)
|+++ ++||++||||
T Consensus 81 L~~~----~lpV~~~DER 94 (98)
T 1iv0_A 81 LRAR----GVEVELWDER 94 (98)
T ss_dssp HHHT----TCEEEEECCS
T ss_pred HhcC----CCCEEEECCC
Confidence 9985 5899999998
No 2
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=99.95 E-value=1.1e-28 Score=180.15 Aligned_cols=86 Identities=19% Similarity=0.353 Sum_probs=80.4
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc--ccc-chHHHHhhcCcCeEEEeccCC-ChH------HHHHHHH
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK--ADQ-ELPQLIEKHKVLGMVVNMPKE-HHE------HVSSFIE 103 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~--~~~-~L~~li~~~~i~~iVVGlP~~-dGt------~v~~f~~ 103 (123)
|+++||||||+||||||+||+.+.+|+|++++++.+ .++ .|.+++++|+++.||||+|++ ||+ .+++|++
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~ 81 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFAN 81 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEEEcCCCCEEeeEEEEEcCCcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHH
Confidence 468999999999999999999999999999998643 457 999999999999999999999 998 8899999
Q ss_pred HHhhcccCCCCCEEEecCC
Q 033269 104 QLDGNEIYRGLPFCYFQKT 122 (123)
Q Consensus 104 ~L~~~~~~~~lpV~l~DEr 122 (123)
+|++++ ++||++||||
T Consensus 82 ~L~~~~---~lpV~~~DER 97 (138)
T 1nu0_A 82 RIHGRF---GVEVKLHDER 97 (138)
T ss_dssp HHHHHH---CCCEEEEEEE
T ss_pred HHHHHh---CCCEEEEcCC
Confidence 999998 8999999998
No 3
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=99.91 E-value=2.1e-24 Score=158.96 Aligned_cols=85 Identities=25% Similarity=0.437 Sum_probs=78.7
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc----ccc-chHHHHhhcCcCeEEEeccCC-ChH------HHHHHH
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----ADQ-ELPQLIEKHKVLGMVVNMPKE-HHE------HVSSFI 102 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~~-~L~~li~~~~i~~iVVGlP~~-dGt------~v~~f~ 102 (123)
||+||||||++|||+|++|+.+.+++|+++|.+.+ ..+ .|.+++++|+++.+|||+|++ ||+ .++.|+
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~p~~~I~~~~~r~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~ 82 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFA 82 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHH
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEeeEEEEEcCCcchHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHH
Confidence 68999999999999999999999999999998532 346 999999999999999999999 998 779999
Q ss_pred HHHhhcccCCCCCEEEecCC
Q 033269 103 EQLDGNEIYRGLPFCYFQKT 122 (123)
Q Consensus 103 ~~L~~~~~~~~lpV~l~DEr 122 (123)
..|.+++ ++||++||||
T Consensus 83 ~~L~~~~---~lpV~~vDEr 99 (150)
T 1vhx_A 83 KVLETTY---NVPVVLWDER 99 (150)
T ss_dssp HHHHHHH---CSCEEEECCS
T ss_pred HHHHHhh---CCCEEEecCC
Confidence 9999888 8999999998
No 4
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=98.65 E-value=1.9e-07 Score=69.64 Aligned_cols=83 Identities=11% Similarity=0.171 Sum_probs=60.6
Q ss_pred ceEEEEecCCCeEEEEEeeCCCc---eeec--ceeeeCccc--------cc--chHHHHhhcCcCeEEEeccCC--ChH-
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGN---EVEP--LTKFDRAKA--------DQ--ELPQLIEKHKVLGMVVNMPKE--HHE- 96 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~---~a~P--l~~i~~~~~--------~~--~L~~li~~~~i~~iVVGlP~~--dGt- 96 (123)
|||||||||+.++|.++.|..+. -.+. .++|..+.. .+ .|.+++++|+++.++|--|+- |.+
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~s 80 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNEL 80 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCCSSCSHH
T ss_pred CEEEEEccccCceEEEEEEecCCccceEEEEEeCeEECCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeehhhccChHH
Confidence 69999999999999999988775 3222 256763321 13 899999999999999999994 655
Q ss_pred -----HHHHHHHHHhhcccCCCCCEEEec
Q 033269 97 -----HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 -----~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.++-.+.....+. ++||..+-
T Consensus 81 al~lgqarGv~~la~~~~---glpv~eyt 106 (166)
T 4ep4_A 81 AYKVGWALGAVLVAAFEA---GVPVYAYG 106 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHc---CCCEEEEC
Confidence 4455554444444 88987653
No 5
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=98.18 E-value=9.5e-06 Score=59.77 Aligned_cols=82 Identities=13% Similarity=0.174 Sum_probs=55.7
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceee--cceeeeCccc-------cc--chHHHHhhcCcCeEEEeccCC--ChH-----
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVE--PLTKFDRAKA-------DQ--ELPQLIEKHKVLGMVVNMPKE--HHE----- 96 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~--Pl~~i~~~~~-------~~--~L~~li~~~~i~~iVVGlP~~--dGt----- 96 (123)
|||||||||..++|.|+.+..+.-.. -.+++..++. .+ .|.+++++|+++.++|=-++- |.+
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~~~~~~~Rl~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~l 80 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKL 80 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHH
T ss_pred CEEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHH
Confidence 68999999999999999987664221 1235543221 12 789999999999999998886 433
Q ss_pred -HHHHHHHHHhhcccCCCCCEEEe
Q 033269 97 -HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 97 -~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.++-.+....... ++||..+
T Consensus 81 gqarGv~~~a~~~~---~ipv~ey 101 (158)
T 1hjr_A 81 GQARGVAIVAAVNQ---ELPVFEY 101 (158)
T ss_dssp HHHHHHHHHHHHTT---TCCEEEE
T ss_pred HHHHHHHHHHHHHc---CCCEEEE
Confidence 3333333333333 7888765
No 6
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=98.01 E-value=2.5e-05 Score=69.97 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=67.9
Q ss_pred hhhhhhhhhccCCC-CceEEEEecC-CCeEEEEEeeCCCceeecceeeeCcc-----ccc-chHHHHhhcCcCeEEEecc
Q 033269 20 FCGRVEKQCVGENA-GLGILGLDVG-NKYIGVSLFKRHGNEVEPLTKFDRAK-----ADQ-ELPQLIEKHKVLGMVVNMP 91 (123)
Q Consensus 20 ~~~~~~~~~~~~~~-~~riLglD~G-~kriGlAvsD~~~~~a~Pl~~i~~~~-----~~~-~L~~li~~~~i~~iVVGlP 91 (123)
|..+....+-..|- ..++||+|+| +.-|.+|+.|..|.+..-..+.+... ... .|.+++.+|+++.|+||
T Consensus 313 f~~nL~~lLl~aP~~~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~iy~~~~~~~~~~~~~~l~~li~~~~~~~IaIG-- 390 (785)
T 3bzc_A 313 FARNLHDLLLAAPAGPRATLGLDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIG-- 390 (785)
T ss_dssp HHHHHHHHHTSCCCCSCCEEEEECCSSSCEEEEEECTTSCEEEEEEECCSGGGCCHHHHHHHHHHHHHHHTCCEEEEE--
T ss_pred HHHHHHHHHcCCCCCCCeEEEECCCCcCceEEEEECCCCCEEEEEEEecCCchhHHHHHHHHHHHHHHHcCCCEEEEC--
Confidence 44444444333332 4589999999 67799999999998665323333221 235 89999999999999999
Q ss_pred CCChH---HHHHHHHHHhhcccCCCCCEEEecCC
Q 033269 92 KEHHE---HVSSFIEQLDGNEIYRGLPFCYFQKT 122 (123)
Q Consensus 92 ~~dGt---~v~~f~~~L~~~~~~~~lpV~l~DEr 122 (123)
||| ....|+..|-+..+...+++++++|.
T Consensus 391 --ngtasret~~~v~~l~~~~~~~~i~~v~v~e~ 422 (785)
T 3bzc_A 391 --NGTASRETDKLAGELIKKYPGMKLTKIMVSEA 422 (785)
T ss_dssp --SSTTHHHHHHHHHHHHHHCGGGCCEEEEECCH
T ss_pred --CCccCHHHHHHHHHHHHhcccCCCCEEEEcCC
Confidence 997 55566666654442115889999883
No 7
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.00041 Score=63.76 Aligned_cols=83 Identities=19% Similarity=0.256 Sum_probs=59.3
Q ss_pred ceEEEEecCCCe-----EEEEEeeCCCceeecceee-eC----cc--ccc-chHHHHhhcCcCeEEEeccCCChH-HHHH
Q 033269 35 LGILGLDVGNKY-----IGVSLFKRHGNEVEPLTKF-DR----AK--ADQ-ELPQLIEKHKVLGMVVNMPKEHHE-HVSS 100 (123)
Q Consensus 35 ~riLglD~G~kr-----iGlAvsD~~~~~a~Pl~~i-~~----~~--~~~-~L~~li~~~~i~~iVVGlP~~dGt-~v~~ 100 (123)
.+|||||+|... |-+|+.|..|.+.. ..++ +. .+ ... .|.+++.+|+++.|+|| ||+ .+..
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~-~~~i~~~~~~~~~~~~~~~~l~~li~~~~~~~IaIG----n~s~et~~ 593 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIR-DYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGIN----GPNPKTQK 593 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEE-EEEECSCTTCSSCCHHHHHHHHHHHHHHCCSEEEEC----CSSTHHHH
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEE-EEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEEC----CCCHHHHH
Confidence 499999999763 88899999998665 3444 21 11 123 89999999999999999 887 5666
Q ss_pred HHHHHhhcc--------cCCCCCEEEecCC
Q 033269 101 FIEQLDGNE--------IYRGLPFCYFQKT 122 (123)
Q Consensus 101 f~~~L~~~~--------~~~~lpV~l~DEr 122 (123)
|...+.+.. +..+++|++++|.
T Consensus 594 l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~ 623 (1030)
T 3psf_A 594 FYKRLQEVLHKKQIVDSRGHTIPIIYVEDE 623 (1030)
T ss_dssp HHHHHHHHHHHTTCBCTTSCBCCEEECCCT
T ss_pred HHHHHHHHHHhhccccccCCCccEEEecch
Confidence 655553311 0015899999985
No 8
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.00065 Score=63.36 Aligned_cols=83 Identities=19% Similarity=0.256 Sum_probs=59.4
Q ss_pred ceEEEEecCCCe-----EEEEEeeCCCceeecceee-eC----cc--ccc-chHHHHhhcCcCeEEEeccCCChH-HHHH
Q 033269 35 LGILGLDVGNKY-----IGVSLFKRHGNEVEPLTKF-DR----AK--ADQ-ELPQLIEKHKVLGMVVNMPKEHHE-HVSS 100 (123)
Q Consensus 35 ~riLglD~G~kr-----iGlAvsD~~~~~a~Pl~~i-~~----~~--~~~-~L~~li~~~~i~~iVVGlP~~dGt-~v~~ 100 (123)
.+|||||+|... |-+|+.|..|.+.. ..++ +. .+ ... .|.+++.+|+|+.|+|| ||+ .+..
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~-~~~i~~~~~~~~~~~~a~~~l~~li~~~~~~vIaIG----n~sret~~ 590 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIR-DYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGIN----GPNPKTQK 590 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEE-EEEECSCTTCSSCSHHHHHHHHHHHHHHCCSEEEEC----CSSTHHHH
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEE-EEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEEC----CCCHHHHH
Confidence 499999999863 77899999998665 3444 21 11 123 89999999999999999 887 5666
Q ss_pred HHHHHhhcc--------cCCCCCEEEecCC
Q 033269 101 FIEQLDGNE--------IYRGLPFCYFQKT 122 (123)
Q Consensus 101 f~~~L~~~~--------~~~~lpV~l~DEr 122 (123)
|...|.+.. +..+++|++++|.
T Consensus 591 l~~~l~~~i~~~~~~~~~~~~i~vviV~e~ 620 (1219)
T 3psi_A 591 FYKRLQEVLHKKQIVDSRGHTIPIIYVEDE 620 (1219)
T ss_dssp HHHHHHHHHHHTTCBCSSSCBCCEEECCCT
T ss_pred HHHHHHHHHHhhccccccCCCccEEEECch
Confidence 655553311 0015899999985
No 9
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=96.03 E-value=0.0099 Score=46.56 Aligned_cols=82 Identities=9% Similarity=0.179 Sum_probs=60.1
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc--ccc-chHHHHhhcCcCeEEEeccCC-C--------hH------
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK--ADQ-ELPQLIEKHKVLGMVVNMPKE-H--------HE------ 96 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~--~~~-~L~~li~~~~i~~iVVGlP~~-d--------Gt------ 96 (123)
+.++|+|+|..++=+|+.|..+.+.. ...++..+ ..+ .+.+.++++++.+|-||.|=. | |.
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~-~~~~~t~~~~~~l~~i~~~~~~~~i~gigi~~pG~vd~~~~~~~~G~i~~~~~ 81 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIID-RIEFPTXMPDETIEXVIQYFSQFSLQAIGIGSFGPVDNDXTSQTYGTITATPX 81 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEE-EEEEECCCHHHHHHHHHHHHTTSCCSEEEEEECSSEECCTTSTTTTEECCCSS
T ss_pred cEEEEEEECcceeEEEEEECCCcEEE-EEEecCCChHHHHHHHHHHhccCCceEEEEEeceeeccccccccccEEecCCC
Confidence 56899999999999999999887654 23444222 224 777888888999999999754 2 32
Q ss_pred ---HHHHHHHHHhhcccCCCCCEEEec
Q 033269 97 ---HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ---~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.-..+.+.|++++ ++||.+.+
T Consensus 82 ~~w~~~~l~~~l~~~~---~~pV~v~N 105 (302)
T 3epq_A 82 AGWRHYPFLQTVXNEM---XIPVGFST 105 (302)
T ss_dssp TTTBTCCHHHHHHHHH---CSCEEEEE
T ss_pred CCccCCChHHHHHHHh---CCCEEEec
Confidence 1135678888888 89988765
No 10
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.80 E-value=0.066 Score=41.60 Aligned_cols=81 Identities=11% Similarity=0.062 Sum_probs=55.7
Q ss_pred eEEEEecCCCeEEEEEeeCCCceeecceee-eCc----c-c-cc-chH----HHHhh-----c-CcCeEEEeccCC-ChH
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNEVEPLTKF-DRA----K-A-DQ-ELP----QLIEK-----H-KVLGMVVNMPKE-HHE 96 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~a~Pl~~i-~~~----~-~-~~-~L~----~li~~-----~-~i~~iVVGlP~~-dGt 96 (123)
.++|+|.|..++=+++.|..+.+..- ... ..+ + . .+ .+. +++++ . ++.+|-||.|=. |..
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~i~~~-~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~ 85 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGKILAE-ADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQED 85 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSCEEEE-EEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHH
T ss_pred EEEEEEcCccceEEEEEeCCCCEEEE-EeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchH
Confidence 68999999999999999988865432 222 111 1 1 12 333 44433 2 688999999887 765
Q ss_pred HHHHHHHHHhhcccCCC---CCEEEec
Q 033269 97 HVSSFIEQLDGNEIYRG---LPFCYFQ 120 (123)
Q Consensus 97 ~v~~f~~~L~~~~~~~~---lpV~l~D 120 (123)
.-..+.+.|++++ + +||.+.+
T Consensus 86 ~~~~l~~~l~~~~---~~~~~pv~v~N 109 (347)
T 2ch5_A 86 AGRILIEELRDRF---PYLSESYLITT 109 (347)
T ss_dssp HHHHHHHHHHHHC---TTSBSCEEEEE
T ss_pred HHHHHHHHHHHhc---CCCCceEEEEC
Confidence 5567788888887 5 7888765
No 11
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.79 E-value=0.0099 Score=46.47 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=55.7
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeC-cc-cc-c-----chHHHHhhcCcCeEEEeccCC-C---hH-----
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDR-AK-AD-Q-----ELPQLIEKHKVLGMVVNMPKE-H---HE----- 96 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~-~~-~~-~-----~L~~li~~~~i~~iVVGlP~~-d---Gt----- 96 (123)
|+.++|+|+|..++=+++.|..+.+.. ...++. .+ .. + .+.++.+++++.+|.||.|=. | |.
T Consensus 1 M~~~lgiDiGgt~i~~~l~d~~G~i~~-~~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~ 79 (321)
T 3vgl_A 1 MGLTIGVDIGGTKIAAGVVDEEGRILS-TFKVATPPTAEGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFAP 79 (321)
T ss_dssp -CEEEEEEECSSEEEEEEECTTCCBCC-CEEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEESSEECTTSSCEEECS
T ss_pred CcEEEEEEECCCEEEEEEECCCCCEEE-EEEeeCCCCHHHHHHHHHHHHHHHHhhcCceEEEEeccccEeCCCCEEEeCC
Confidence 567999999999999999998886543 233332 11 11 2 344444556899999999854 3 32
Q ss_pred ----HHHHHHHHHhhcccCCCCCEEEec
Q 033269 97 ----HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ----~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.-..+.+.|++++ ++||.+.+
T Consensus 80 ~l~w~~~~l~~~l~~~~---~~pv~v~N 104 (321)
T 3vgl_A 80 NIDWRHEPLKDKVEQRV---GLPVVVEN 104 (321)
T ss_dssp SSCCEEECHHHHHHHHH---CSCEEEEE
T ss_pred CCCCcCCCHHHHHhhhh---CCCEEEEe
Confidence 1134577888888 89988765
No 12
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=95.73 E-value=0.054 Score=41.41 Aligned_cols=82 Identities=9% Similarity=0.009 Sum_probs=54.9
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeCc-----c-cc-c-chHHHHhhc---CcCeEEEeccCC-ChHHHHHH
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA-----K-AD-Q-ELPQLIEKH---KVLGMVVNMPKE-HHEHVSSF 101 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~-----~-~~-~-~L~~li~~~---~i~~iVVGlP~~-dGt~v~~f 101 (123)
||.++|+|.|..++=+++.|..+.+.. ....+.. + .. + .+.+.+++. .+.++.||.|=. +.+....+
T Consensus 1 mM~~lgiDiGgt~~~~~l~d~~g~i~~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~igi~~~G~~~~~~~~~l 79 (299)
T 2e2o_A 1 MMIIVGVDAGGTKTKAVAYDCEGNFIG-EGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGMGVAGLDSKFDWENF 79 (299)
T ss_dssp CCCEEEEEECSSCEEEEEECTTSCEEE-EEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEEEETTCCSHHHHHHH
T ss_pred CeEEEEEEeCCCcEEEEEEcCCCCEEE-EEeCCCCCcccCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCchhHHHHH
Confidence 457899999999999999998886543 1233221 1 11 2 444444432 277899998765 33344677
Q ss_pred HHHHhhcccCCCCCEEEec
Q 033269 102 IEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 102 ~~~L~~~~~~~~lpV~l~D 120 (123)
.+.|++ + ++||.+++
T Consensus 80 ~~~l~~-~---~~pv~v~N 94 (299)
T 2e2o_A 80 TPLASL-I---APKVIIQH 94 (299)
T ss_dssp HHHHTT-S---SSEEEEEE
T ss_pred HHHHHh-C---CCCEEEeC
Confidence 888888 7 78988765
No 13
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.29 E-value=0.022 Score=44.27 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=53.9
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---cc-c-chHHHHh------hcCcCeEEEeccCC-C---hH--H
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---AD-Q-ELPQLIE------KHKVLGMVVNMPKE-H---HE--H 97 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~-~-~L~~li~------~~~i~~iVVGlP~~-d---Gt--~ 97 (123)
|.++|+|+|..++-+++.|..+.+. ...++.+. .. + .+.++++ ..++.++.||.|=. | |. .
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~~~l~--~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~ 78 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGKRLLS--KVVVPTPKEGGERVAEALAEAAERAEREAGVRGEAIGLGTPGPLDFRRGVIRF 78 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSSSBSC--CEEEECCSSCHHHHHHHHHHHHHHHHHHHTCCCSSEEEEESSCEETTTTEEC-
T ss_pred CEEEEEEEcCCEEEEEEEeCCCcEE--EEEEcCCCCChHHHHHHHHHHHHHHHhhccCCceEEEEEecccEeCCCCEEEc
Confidence 4789999999999999999875542 23444222 12 2 4444443 25799999999865 3 32 1
Q ss_pred H--------HHHHHHHhhcccCCCCCEEEec
Q 033269 98 V--------SSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 98 v--------~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. ..+.+.|++++ ++||.+.+
T Consensus 79 ~~~~~~w~~~~l~~~l~~~~---~~pv~v~N 106 (302)
T 3vov_A 79 APNIPGVQDFPIRRILEEAT---GRPVFLEN 106 (302)
T ss_dssp --CCTTCTTCCHHHHHHHHH---SSCEEEEE
T ss_pred CCCCCCcCCCChHHHHHHhh---CCCEEEEe
Confidence 1 23467888888 89998765
No 14
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.06 E-value=0.029 Score=43.16 Aligned_cols=85 Identities=19% Similarity=0.305 Sum_probs=55.6
Q ss_pred CCC-ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc----cc-c-c----hHHHHhhc-----CcCeEEEeccCC-C
Q 033269 32 NAG-LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----AD-Q-E----LPQLIEKH-----KVLGMVVNMPKE-H 94 (123)
Q Consensus 32 ~~~-~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~-~-~----L~~li~~~-----~i~~iVVGlP~~-d 94 (123)
|+| ..++|+|+|..++=+++.|..+.+.. ...++... .. + . +.+++++. ++.+|.||.|=. |
T Consensus 2 ~~m~~~~lgiDiggt~~~~~l~d~~g~il~-~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~pG~vd 80 (326)
T 2qm1_A 2 NAMDKKIIGIDLGGTTIKFAILTTDGVVQQ-KWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVD 80 (326)
T ss_dssp CGGGCEEEEEEECSSEEEEEEEETTCCEEE-EEEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEE
T ss_pred CCcccEEEEEEECCCEEEEEEECCCCCEEE-EEEEcCCCCCCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEeccccee
Confidence 455 47899999999999999998886543 22333211 11 2 3 34444443 467888988864 3
Q ss_pred ---hHH---------HH-HHHHHHhhcccCCCCCEEEec
Q 033269 95 ---HEH---------VS-SFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 95 ---Gt~---------v~-~f~~~L~~~~~~~~lpV~l~D 120 (123)
|.. -. .+.+.|++++ ++||.+.+
T Consensus 81 ~~~g~v~~~~~l~w~~~~~l~~~l~~~~---~~pv~v~N 116 (326)
T 2qm1_A 81 IEKGTVVGAYNLNWTTVQPVKEQIESAL---GIPFALDN 116 (326)
T ss_dssp TTTTEEECBGGGTBCSCBCHHHHHHHHH---CSCEEEEE
T ss_pred CCCCEEEecCCCCccCCchHHHHHHHHh---CCCEEEec
Confidence 430 02 6688898888 78988765
No 15
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=94.52 E-value=0.056 Score=41.18 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=56.2
Q ss_pred eEEEEecCCCeEEEEEeeCCCceeecceeeeC-cc-cc-c-chHHHHhhcCcCeEEEeccCC-C---hH-----H-----
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNEVEPLTKFDR-AK-AD-Q-ELPQLIEKHKVLGMVVNMPKE-H---HE-----H----- 97 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~-~~-~~-~-~L~~li~~~~i~~iVVGlP~~-d---Gt-----~----- 97 (123)
.++|+|.|..++=+++.|..+.+.. ...++. .. .. + .+.+++++.++.++.||.|=. | |. .
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~-~~~~~~~~~~~~~~~~i~~~i~~~~i~gigi~~pG~vd~~~g~v~~~~~~~~~~ 83 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILD-KTSISTPENLEDLLAWLDQRLSEQDYSGIAMSVPGAVNQETGVIDGFSAVPYIH 83 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEE-EEEECCCSSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCBEESCCSSGGGS
T ss_pred EEEEEEECCCEEEEEEECCCCCEEE-EEEEeCCCCHHHHHHHHHHHHHhCCCcEEEEEecCcccCCCCEEEecCCCCccc
Confidence 6899999999999999998886543 123332 11 22 3 777777777899999999854 3 42 1
Q ss_pred HHHHHHHHhhcccCCCCCEEEec
Q 033269 98 VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 98 v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
-..+.+.| +++ ++||.+.+
T Consensus 84 ~~~l~~~l-~~~---~~pv~v~N 102 (292)
T 2gup_A 84 GFSWYEAL-SSY---QLPVHLEN 102 (292)
T ss_dssp SSBHHHHT-GGG---CCCEEEEE
T ss_pred CCCHHHHH-HHc---CCCEEEec
Confidence 12467888 888 89988754
No 16
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=94.23 E-value=0.16 Score=38.50 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=54.1
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc-ccc--chHHHHhhc-----CcCeEEEec-cCC-ChH-HHHHHHH
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK-ADQ--ELPQLIEKH-----KVLGMVVNM-PKE-HHE-HVSSFIE 103 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~-~~~--~L~~li~~~-----~i~~iVVGl-P~~-dGt-~v~~f~~ 103 (123)
|++||||--+..|++|+.+....++. ...-.+.. +.+ .+.+++++. .++.|+++. |=+ -|- ....+++
T Consensus 2 M~iLaIdTS~~~~svAl~~~~~~~~~-~~~~~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~Ak 80 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVNDQVISR-SEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQ 80 (213)
T ss_dssp CCEEEEECSSSEEEEEEESSSCEEEE-EEECCSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHH
T ss_pred CEEEEEEccCcceEEEEEECCEEEEE-EEechHHHHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHH
Confidence 78999999999999999986544444 33222222 223 777777764 589999983 222 121 5667888
Q ss_pred HHhhcccCCCCCEEEe
Q 033269 104 QLDGNEIYRGLPFCYF 119 (123)
Q Consensus 104 ~L~~~~~~~~lpV~l~ 119 (123)
-|.... ++|++-+
T Consensus 81 gLa~~~---~iPl~gV 93 (213)
T 3r6m_A 81 GLAFGA---ELPMIGV 93 (213)
T ss_dssp HHHHHT---TCCEEEE
T ss_pred HHHHHh---CCCEEEE
Confidence 888766 7887654
No 17
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.08 E-value=0.13 Score=39.67 Aligned_cols=82 Identities=18% Similarity=0.304 Sum_probs=56.3
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---cc-c-chHHHHhh-cCcCeEEEeccCC-C---hH-----H--
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---AD-Q-ELPQLIEK-HKVLGMVVNMPKE-H---HE-----H-- 97 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~-~-~L~~li~~-~~i~~iVVGlP~~-d---Gt-----~-- 97 (123)
|.++|+|+|..++=+++.|..+.+.. ...++... .. + .+.+.+.+ .++.+|-||.|=. | |. .
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~-~~~~~~~~~~~~~~~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~ 82 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIIL-TKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIR 82 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEE-EEEEECSTTCHHHHHHHHHHHHHTCTTCCEEEEEESSEECTTTCEEEECTTCG
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEE-EEEecCCCCCHHHHHHHHHHHHhhcCCeeEEEEecCcceeCCCCEEEeCCCCC
Confidence 57999999999999999999887554 23333221 12 3 56665554 4688999999854 3 33 1
Q ss_pred ---HHHHHHHHhhcccCCCCCEEEec
Q 033269 98 ---VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 98 ---v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
-..+.+.|++++ ++||.+.+
T Consensus 83 ~w~~~~l~~~l~~~~---~~pV~v~N 105 (297)
T 4htl_A 83 RFDNFNLKEWLEAET---GLPVAIEN 105 (297)
T ss_dssp GGTTEEHHHHHHHHH---CSCEEEEE
T ss_pred CccCCCHHHHHHHHH---CcCEEEec
Confidence 123577888888 89988764
No 18
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.99 E-value=0.091 Score=40.71 Aligned_cols=86 Identities=10% Similarity=0.087 Sum_probs=54.0
Q ss_pred CCCCceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---cc-c-chHHHHhh----c-CcCeEEEeccCC-C---hH
Q 033269 31 ENAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---AD-Q-ELPQLIEK----H-KVLGMVVNMPKE-H---HE 96 (123)
Q Consensus 31 ~~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~-~-~L~~li~~----~-~i~~iVVGlP~~-d---Gt 96 (123)
.++.+.++|+|.|..++=+++.|..+.+.. ...++..+ .. + .+.+++++ . .+.++.||.|=. | |.
T Consensus 20 ~~~~~~~lgiDiGgt~i~~~l~d~~g~il~-~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~~igi~~pG~vd~~~g~ 98 (327)
T 2ap1_A 20 FQSNAMYYGFDIGGTKIALGVFDSTRRLQW-EKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGT 98 (327)
T ss_dssp ---CCEEEEEEECSSEEEEEEEETTCCEEE-EEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSC
T ss_pred EcCCceEEEEEECCCEEEEEEEeCCCCEEE-EEEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeeeeEECCCCE
Confidence 344567999999999999999998886543 12333211 11 2 55555543 2 377899999854 3 32
Q ss_pred H---------HHHHHHHHhhcccCCCCCEEEec
Q 033269 97 H---------VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ~---------v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. -..+.+.|++++ ++||.+.+
T Consensus 99 v~~~~~~~~~~~~l~~~l~~~~---~~pv~v~N 128 (327)
T 2ap1_A 99 LYAANVPAASGKPLRADLSARL---DRDVRLDN 128 (327)
T ss_dssp CBCTTCTTTTTSCHHHHHHHHH---TSCEEEEE
T ss_pred EEccCCCccCCCChHHHHHHHH---CCCEEEec
Confidence 1 124567888888 78987754
No 19
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=93.97 E-value=0.23 Score=39.94 Aligned_cols=82 Identities=13% Similarity=0.213 Sum_probs=51.4
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeCc-----c-cc--------c-chHHHHhhc-----CcCeEEEeccC-
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA-----K-AD--------Q-ELPQLIEKH-----KVLGMVVNMPK- 92 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~-----~-~~--------~-~L~~li~~~-----~i~~iVVGlP~- 92 (123)
|+.+||||+|..++=+|+.|....+++ ..++.+ . .. . .+.+++++. ++.+| ||.|=
T Consensus 1 m~~vlgidiGgt~ik~al~d~~~il~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i~~pG~ 77 (381)
T 1saz_A 1 MFRILTINPGSTSTKLSIFEDERMVKM--QNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF-VSRGGL 77 (381)
T ss_dssp CCEEEEEEECSSEEEEEEEETTEEEEE--EEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE-EEECCS
T ss_pred CCeEEEEECCccceeEEEEecchheee--eecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE-EecCCC
Confidence 567999999999999999996522222 233321 1 11 2 334444443 47888 99763
Q ss_pred -C--ChHH-----------------------HHHHHHHHhhcccCCCCCEEEecC
Q 033269 93 -E--HHEH-----------------------VSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 93 -~--dGt~-----------------------v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
+ +|.. --.+++.|++++ ++||.+.|.
T Consensus 78 vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~---~~Pv~v~ND 129 (381)
T 1saz_A 78 LDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSET---GVPAYVVDP 129 (381)
T ss_dssp CSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHH---CCCEEEESC
T ss_pred CCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhc---CCCEEEeCC
Confidence 2 3321 235567788888 899987764
No 20
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=93.94 E-value=0.12 Score=40.37 Aligned_cols=86 Identities=13% Similarity=0.125 Sum_probs=56.1
Q ss_pred CCCCceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---cc-c-chHHHHh----hc-CcCeEEEeccCC-C---hH
Q 033269 31 ENAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---AD-Q-ELPQLIE----KH-KVLGMVVNMPKE-H---HE 96 (123)
Q Consensus 31 ~~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~-~-~L~~li~----~~-~i~~iVVGlP~~-d---Gt 96 (123)
.++.+.++|+|+|..++=+++.|..+.+.. ...++... .. + .+.++++ +. .+.+|-||.|=. | |.
T Consensus 20 ~n~~~~~lgiDiGgt~i~~~l~d~~G~il~-~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~gigi~~pG~vd~~~g~ 98 (327)
T 4db3_A 20 FQSNAMYYGFDVGGTKIEFGAFNEKLERVA-TERVPTPTDDYPLLLETIAGLVAKYDQEFACEGKIGLGLPGMEDADDAT 98 (327)
T ss_dssp SCCSCCEEEEEECSSEEEEEEECTTCCEEE-EEEEECCTTCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESEEECTTTCC
T ss_pred ECCCcEEEEEEECCCEEEEEEEeCCCcEEE-EEEecCCCCCHHHHHHHHHHHHHHHHHhcCCccEEEEEeeccEeCCCCE
Confidence 345457999999999999999999887544 23444222 11 2 4444443 22 467888998754 3 32
Q ss_pred ---------HHHHHHHHHhhcccCCCCCEEEec
Q 033269 97 ---------HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ---------~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.-..+.+.|++++ ++||.+.+
T Consensus 99 v~~~~~~~~~~~~l~~~l~~~~---~~pV~v~N 128 (327)
T 4db3_A 99 VLTVNVPAAKGKPLRADLEAKI---GRSVKIEN 128 (327)
T ss_dssp EEESSSGGGTTSCHHHHHHHHH---SSCCEEEE
T ss_pred EEcCCCccccCCCHHHHHHHHH---CCCEEEec
Confidence 1134577888888 78987754
No 21
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=93.90 E-value=0.16 Score=39.53 Aligned_cols=82 Identities=17% Similarity=0.320 Sum_probs=54.9
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---cc-c-chHHHHh----hc--CcCeEEEeccCC-C---hH---
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---AD-Q-ELPQLIE----KH--KVLGMVVNMPKE-H---HE--- 96 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~-~-~L~~li~----~~--~i~~iVVGlP~~-d---Gt--- 96 (123)
..++|+|+|..++=+++.|..+.+..- ..++..+ .. + .+.++++ ++ ++.+|-||.|=. | |.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~-~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~ 85 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHC-EKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIIS 85 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEE-EEEEHHHHHTTCHHHHHHHHHHHHHHHHTEEEEEEEEEESSCBCTTSSCBCS
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEE-EEecCccccHHHHHHHHHHHHHHHHHhcCCCeeEEEEeccccEeCCCCEEEe
Confidence 578999999999999999998875441 2333111 12 2 4444443 33 457888988754 3 33
Q ss_pred -------HH--HHHHHHHhhcccCCCCCEEEec
Q 033269 97 -------HV--SSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 -------~v--~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.. ..+.+.|++++ ++||.+.+
T Consensus 86 ~~~l~~~~~~~~~l~~~l~~~~---~~pv~v~N 115 (310)
T 3htv_A 86 TPNLPLTAADLYDLADKLENTL---NCPVEFSR 115 (310)
T ss_dssp CCSSSCCHHHHTTHHHHHHHHH---TSCEEEEE
T ss_pred CCCCCCccccCccHHHHHHHHh---CCCEEEee
Confidence 11 35788999998 89988754
No 22
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=92.84 E-value=0.31 Score=39.47 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=57.1
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---cc-c-chHH---HHhhc---CcCeEEEeccCC-C---hH--
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---AD-Q-ELPQ---LIEKH---KVLGMVVNMPKE-H---HE-- 96 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~-~-~L~~---li~~~---~i~~iVVGlP~~-d---Gt-- 96 (123)
...++|+|+|..++-+++.| .+.+..-...++... .. + .+.+ .+++. ++.+|-||.|=. | |.
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~~~~~~~~~l~~i~~~~~~i~~~~~~~i~gIGIavPG~Vd~~~G~i~ 86 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIG 86 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE-TTEECSCCEEEECCTTCHHHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEEC
T ss_pred CCEEEEEEECcceEEEEEEE-CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhhcCCeEEEEEecceEeCCCCEEE
Confidence 56789999999999999999 876543211444221 11 3 5666 66553 799999999855 3 43
Q ss_pred ---H------HHHHHHHHhhcccCCCCCEEEec
Q 033269 97 ---H------VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ---~------v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. -..+.+.|++++ ++||.+.+
T Consensus 87 ~~~nlp~w~~~~~l~~~L~~~~---g~PV~veN 116 (366)
T 3mcp_A 87 DLPNFPSFRGGVALGPFLEDIF---GIPVFINN 116 (366)
T ss_dssp CCTTCGGGTTCBCHHHHHHHHH---CSCEEEEC
T ss_pred eCCCcccccCCCCHHHHHHHHH---CCCEEEec
Confidence 1 124567899888 89988765
No 23
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=92.83 E-value=0.37 Score=37.55 Aligned_cols=80 Identities=14% Similarity=0.074 Sum_probs=48.4
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeC---ccccc--chHHHHhhcC-----cCeEEEeccCCChHHHHHHHH
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDR---AKADQ--ELPQLIEKHK-----VLGMVVNMPKEHHEHVSSFIE 103 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~---~~~~~--~L~~li~~~~-----i~~iVVGlP~~dGt~v~~f~~ 103 (123)
|+.+|+||+|..++=+|+.|....+.. ..++. +...+ .|.++++.++ +++++|+-|-. .....+.+
T Consensus 1 M~MlL~IDIGNT~iK~gl~d~~~l~~~--~r~~T~~~t~de~~~~l~~ll~~~~~~~~~I~~iiISSVvp--~~~~~l~~ 76 (266)
T 3djc_A 1 MSLILCIDVGNSHIYGGVFDGDEIKLR--FRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVVP--QVDYSLRS 76 (266)
T ss_dssp --CEEEEEECSSEEEEEEEETTEEEEE--EEEECSCCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEESCH--HHHHHHHH
T ss_pred CceEEEEEECCCeEEEEEEECCEEEEE--EEecCCCCCHHHHHHHHHHHHHHcCCChhhceEEEEecchH--hHHHHHHH
Confidence 457899999999999999996533322 22321 11223 7778887765 88999996543 13334444
Q ss_pred HHhhcccCCCCCEEEec
Q 033269 104 QLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 104 ~L~~~~~~~~lpV~l~D 120 (123)
.+++.+ ++++.+++
T Consensus 77 ~~~~~~---~~~~~~v~ 90 (266)
T 3djc_A 77 ACVKYF---SIDPFLLQ 90 (266)
T ss_dssp HHHHHT---CCCCEECC
T ss_pred HHHHHc---CCCeEEEc
Confidence 455445 45555544
No 24
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=92.20 E-value=0.77 Score=34.72 Aligned_cols=81 Identities=12% Similarity=0.130 Sum_probs=52.6
Q ss_pred eEEEEecCCCeEEEEEeeCCCceeecceeeeCcc-ccc--chHHHHhhcC-----cCeEEEec-cCC-ChH-HHHHHHHH
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK-ADQ--ELPQLIEKHK-----VLGMVVNM-PKE-HHE-HVSSFIEQ 104 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~-~~~--~L~~li~~~~-----i~~iVVGl-P~~-dGt-~v~~f~~~ 104 (123)
++||||-=+..+++|+.+....++.. ....++. ..+ .+.+++++.+ ++.|++|. |=+ -|- ....+++.
T Consensus 2 ~iL~idTs~~~~sval~~~~~~~~~~-~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~ 80 (231)
T 2gel_A 2 RILAIDTATEACSVALWNNGTINAHF-ELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQG 80 (231)
T ss_dssp EEEEEECSSSEEEEEEEETTEEEEEE-EECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCcCeEEEEEECCEEEEEE-hhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHH
Confidence 68999999999999999854333321 1112211 223 7777777654 78999983 222 222 44588888
Q ss_pred HhhcccCCCCCEEEec
Q 033269 105 LDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 105 L~~~~~~~~lpV~l~D 120 (123)
|.... ++|++-++
T Consensus 81 la~~~---~~Pl~~V~ 93 (231)
T 2gel_A 81 LALGA---NLPMIGVS 93 (231)
T ss_dssp HHHTT---TCCEEEEC
T ss_pred HHHHc---CCCEEEec
Confidence 88766 78887664
No 25
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=91.82 E-value=0.27 Score=37.17 Aligned_cols=82 Identities=12% Similarity=0.213 Sum_probs=53.7
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc----cc-c-chHHHHhhc--CcCeEEEeccCC-C---hH-----H
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----AD-Q-ELPQLIEKH--KVLGMVVNMPKE-H---HE-----H 97 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~-~-~L~~li~~~--~i~~iVVGlP~~-d---Gt-----~ 97 (123)
|.++|+|.|..++=+++.|..+.+.. ...++... .. + .+.+++++. ++..+.||.|=. | |. .
T Consensus 1 m~~lgidiggt~~~~~l~d~~g~il~-~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~igi~~pG~vd~~~g~v~~~~~ 79 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGADGQIRD-RRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHN 79 (289)
T ss_dssp CCEEEEEECSSEEEEEEECTTCCEEE-EEEEECCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECSSGGG
T ss_pred CeEEEEEeCCCEEEEEEECCCCCEEE-EEEecCCCCCCHHHHHHHHHHHHHHHHhhCCEEEEEeccceeCCCCEEEeCCC
Confidence 36899999999999999998876543 23333221 12 3 666666543 356788888754 3 21 1
Q ss_pred -----HHHHHHHHhhcccCCCCCEEEec
Q 033269 98 -----VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 98 -----v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
-..+.+.|++++ ++||.+.+
T Consensus 80 ~~~w~~~~l~~~l~~~~---~~pv~v~N 104 (289)
T 2aa4_A 80 LGGLLHFPLVKTLEQLT---NLPTIAIN 104 (289)
T ss_dssp GGGGTTCCHHHHHHHHH---CSCEEEEE
T ss_pred CCcccCCChHHHHHHHH---CCCEEEec
Confidence 124578888888 78988765
No 26
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=91.43 E-value=0.54 Score=36.61 Aligned_cols=81 Identities=16% Similarity=0.157 Sum_probs=54.4
Q ss_pred CceEEEEecCCCeEEEEEeeC-CCceeecceeeeCcc-ccc--chHHHHhhc--CcCeEEEeccCC-C-hH--------H
Q 033269 34 GLGILGLDVGNKYIGVSLFKR-HGNEVEPLTKFDRAK-ADQ--ELPQLIEKH--KVLGMVVNMPKE-H-HE--------H 97 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~-~~~~a~Pl~~i~~~~-~~~--~L~~li~~~--~i~~iVVGlP~~-d-Gt--------~ 97 (123)
|..++|+|+|..++=+|+.|. .+.+.. ...++... ..+ .+.+++++. ++.++.||.|=- | |. .
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~ 91 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQ-AKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWA 91 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEE-EEEEEGGGCSCHHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCC
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEE-EEEecCCCcCCHHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCc
Confidence 889999999999999999994 566543 23444222 223 566666654 578899999865 4 32 1
Q ss_pred HHHHHHHHhhcccCCCCC-EEEec
Q 033269 98 VSSFIEQLDGNEIYRGLP-FCYFQ 120 (123)
Q Consensus 98 v~~f~~~L~~~~~~~~lp-V~l~D 120 (123)
.. .+.|++++ ++| |.+.+
T Consensus 92 -~~-~~~l~~~~---~~p~V~v~N 110 (332)
T 1sz2_A 92 -FS-IAEMKKNL---GFSHLEIIN 110 (332)
T ss_dssp -EE-HHHHHHHH---TCSEEEEEE
T ss_pred -CC-HHHHHHHh---CCCcEEEEe
Confidence 12 36778888 788 87654
No 27
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=91.42 E-value=0.75 Score=36.28 Aligned_cols=84 Identities=11% Similarity=0.090 Sum_probs=52.2
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc-------------ccc--chHHHHhh-----cCcCeEEEe-ccCC
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK-------------ADQ--ELPQLIEK-----HKVLGMVVN-MPKE 93 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~-------------~~~--~L~~li~~-----~~i~~iVVG-lP~~ 93 (123)
|.+||||-+...+++|+.+....++.-...+.+.. ..+ .+++++++ ..++.|+++ -|=.
T Consensus 1 M~iLgIdts~~~~~val~~~g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~ 80 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSEDKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGL 80 (330)
T ss_dssp CCEEEEECSSSEEEEEEECSSCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSC
T ss_pred CEEEEEEccCCCeEEEEEECCEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCc
Confidence 57999999999999999986544443211111100 112 45566555 357889874 2322
Q ss_pred -ChH-HHHHHHHHHhhcccCCCCCEEEecC
Q 033269 94 -HHE-HVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 94 -dGt-~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
-|- ....|++.|...+ ++|++.+++
T Consensus 81 ~~~lrvg~~~ak~la~~~---~~pl~~v~h 107 (330)
T 2ivn_A 81 GPALRVVATAARALAVKY---RKPIVGVNH 107 (330)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCCEEEEEH
T ss_pred hHHHHHHHHHHHHHHHHc---CCCEEeeCc
Confidence 222 4456888888766 789888765
No 28
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=90.77 E-value=0.44 Score=37.74 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=50.8
Q ss_pred CceEEEEecCCCeEEEEEeeC----CCceeecceeeeCcc-cc-c-chHHHHhhc------CcCeEEEeccCC-C-hHHH
Q 033269 34 GLGILGLDVGNKYIGVSLFKR----HGNEVEPLTKFDRAK-AD-Q-ELPQLIEKH------KVLGMVVNMPKE-H-HEHV 98 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~----~~~~a~Pl~~i~~~~-~~-~-~L~~li~~~------~i~~iVVGlP~~-d-Gt~v 98 (123)
|+.++|+|+|..++=+|+.|. .+.+..-....+..+ .. + .+.+++++. ++.++.||.|=. | |...
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~gigi~~pG~vd~g~v~ 107 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIELMPASVMKRVKAGVINVPGPVTGGAVG 107 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEECTTCBGGGHHHHHHHHHHHSCHHHHTTEEEEEEEESSCEETTTEE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeeecCCCCHHHHHHHHHHHHHHHhhcccccccEEEEEeeccccCCEEe
Confidence 778999999999999999997 665433111122111 22 3 566665542 477899999876 4 4311
Q ss_pred ---------HHHHHHHhhcccCCCC-CEEEec
Q 033269 99 ---------SSFIEQLDGNEIYRGL-PFCYFQ 120 (123)
Q Consensus 99 ---------~~f~~~L~~~~~~~~l-pV~l~D 120 (123)
-.+.+.+++++ ++ ||.+.+
T Consensus 108 ~~~~~~~~~~~l~~~l~~~~---~~~pv~v~N 136 (373)
T 2q2r_A 108 GPFNNLKGIARLSDYPKALF---PPGHSAILN 136 (373)
T ss_dssp CCCSSSBSCEEGGGSCTTTS---CTTSEEEEE
T ss_pred ccCCCCCCcCCHHHHHHHhc---CCCCEEEEc
Confidence 13333444445 56 777654
No 29
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=90.13 E-value=1.6 Score=32.97 Aligned_cols=82 Identities=11% Similarity=-0.051 Sum_probs=52.3
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc-ccc--chHHHHhhc-----CcCeEEEec-cCC-ChH-HHHHHHH
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK-ADQ--ELPQLIEKH-----KVLGMVVNM-PKE-HHE-HVSSFIE 103 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~-~~~--~L~~li~~~-----~i~~iVVGl-P~~-dGt-~v~~f~~ 103 (123)
-.|||||-=+..|++|+.+....+ +-.....+.. +.+ .+.+++++. +++.|+||. |=+ -|- ....+++
T Consensus 12 ~~iLaidTS~~~~sval~~~~~~l-~~~~~~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak 90 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKGEDLF-EISYTGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVV 90 (218)
T ss_dssp -CEEEEEECSSSEEEEEEETTEEE-EEEEESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHH
T ss_pred ceEEEEEcCCcCeEEEEEECCEEE-EEEecchHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHH
Confidence 468999999999999999854333 2111112211 223 777777654 479999982 211 111 6677899
Q ss_pred HHhhcccCCCCCEEEec
Q 033269 104 QLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 104 ~L~~~~~~~~lpV~l~D 120 (123)
.|+... ++|++-++
T Consensus 91 ~La~~~---~iPl~gVs 104 (218)
T 2a6a_A 91 GLVSPY---DIPVAPLN 104 (218)
T ss_dssp HHHGGG---TCCEEEEC
T ss_pred HHHHHc---CCCEEEeC
Confidence 998777 88887553
No 30
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=90.07 E-value=0.44 Score=37.87 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=54.4
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCc---c-c-cc-c----hHHHHhh-----cCcCeEEEeccCC-C---h
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA---K-A-DQ-E----LPQLIEK-----HKVLGMVVNMPKE-H---H 95 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~---~-~-~~-~----L~~li~~-----~~i~~iVVGlP~~-d---G 95 (123)
..++|+|+|..++=+++.|..+.+.. ...++.+ + . .+ . +.+++++ .++.++.||.|=. | |
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~G~vl~-~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g 165 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDASMNILA-HEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERG 165 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEE-EEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTT
T ss_pred CeEEEEEECCCEEEEEEECCCCCEEE-EEEEccCCCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCC
Confidence 56899999999999999998886543 1233321 1 1 12 3 3444433 3688999999875 3 3
Q ss_pred HH---------HHHHHHHHhhcccCCCCCEEEec
Q 033269 96 EH---------VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 96 t~---------v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.. -..+.+.|++++ ++||.+.+
T Consensus 166 ~v~~~~~l~w~~~~l~~~l~~~~---~~pV~v~N 196 (380)
T 2hoe_A 166 IIIDPRNFPLSQIPLANLLKEKY---GIEVWVEN 196 (380)
T ss_dssp EECCCSSCTTBTSCHHHHHHHHH---CSEEEEEE
T ss_pred EEeccCCCCCcCCChHHHHHHHh---CCCEEEec
Confidence 21 125677888888 78988765
No 31
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=89.86 E-value=0.58 Score=37.31 Aligned_cols=82 Identities=15% Similarity=0.164 Sum_probs=53.0
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCc--c-cc-c-ch----HHHHhh-----cCcCeEEEeccCC-C---hH
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA--K-AD-Q-EL----PQLIEK-----HKVLGMVVNMPKE-H---HE 96 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~--~-~~-~-~L----~~li~~-----~~i~~iVVGlP~~-d---Gt 96 (123)
..++|+|+|..++=+++.|..+.+.. ...++.. + .. + .+ .+++++ .++.+|.||.|=. | |.
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~~G~il~-~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~ 163 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDLSSKLVV-EESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGI 163 (406)
T ss_dssp CEEEEEEEETTEEEEEEEETTCCEEE-EEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTE
T ss_pred cEEEEEEEcCCEEEEEEEcCCCCEEE-EEEecCCCCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCE
Confidence 56899999999999999998886543 1223211 1 12 2 44 444443 3577888988864 3 32
Q ss_pred -----H-----HHHHHHHHhhcccCCCCCEEEec
Q 033269 97 -----H-----VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 -----~-----v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. -..+.+.|++++ ++||.+.+
T Consensus 164 v~~~~~l~~w~~~~l~~~l~~~~---~~pv~v~N 194 (406)
T 1z6r_A 164 VHRMPFYEDVKEMPLGEALEQHT---GVPVYIQH 194 (406)
T ss_dssp EEECTTCTTCSSBCHHHHHHHHH---SSCEEEEE
T ss_pred EecCCCCCCccCCCHHHHHHHHH---CCCEEEec
Confidence 1 124567888888 78988765
No 32
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=89.71 E-value=0.75 Score=34.62 Aligned_cols=83 Identities=13% Similarity=0.179 Sum_probs=52.0
Q ss_pred ceEEEEecCCCeEEEEEeeCC-CceeecceeeeCc---c-cc-c-chHHHHhhc--------CcCeEEEeccCC--ChH-
Q 033269 35 LGILGLDVGNKYIGVSLFKRH-GNEVEPLTKFDRA---K-AD-Q-ELPQLIEKH--------KVLGMVVNMPKE--HHE- 96 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~-~~~a~Pl~~i~~~---~-~~-~-~L~~li~~~--------~i~~iVVGlP~~--dGt- 96 (123)
+.++|+|+|..++=+++.|.. +.+..-...++.. + .. + .+.+++++. .+.+|-||.|=. +|+
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~igi~~pG~v~~g~v 91 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGIIQHGVV 91 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSCEETTEE
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCCccCCHHHHHHHHHHHHHHHHHhccccCccceEEEEccceEcCCEE
Confidence 578999999999999999976 5543211233321 1 11 2 444444332 345789999865 343
Q ss_pred ----H------HHHHHHHHhhcccCCCCCEEEec
Q 033269 97 ----H------VSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ----~------v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. -..+.+.|++++ ++||.+.+
T Consensus 92 ~~~~~l~~~w~~~~l~~~l~~~~---~~pV~v~N 122 (267)
T 1woq_A 92 HSAANVDKSWLNTDIDALLTARL---GRPVEVIN 122 (267)
T ss_dssp CCCTTSCGGGTTCBHHHHHHHHH---TSCEEEEE
T ss_pred EeCCCCCCCCCCCCHHHHHHHHH---CCCEEEee
Confidence 1 124467888888 89988765
No 33
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=89.38 E-value=0.51 Score=38.15 Aligned_cols=83 Identities=17% Similarity=0.292 Sum_probs=53.9
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc---c-cc-c----hHHHHhhc-----CcCeEEEeccCC-C---h
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK---A-DQ-E----LPQLIEKH-----KVLGMVVNMPKE-H---H 95 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~---~-~~-~----L~~li~~~-----~i~~iVVGlP~~-d---G 95 (123)
...++|+|+|..++=+++.|..+.+.. ...++.+. . .+ . +.+++++. ++.+|.||.|=. | |
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~-~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g 185 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLI-DTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQG 185 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEE-EEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTT
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEE-EEEEcCCCCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEeccCcEeCCCC
Confidence 357899999999999999998886543 12333211 1 12 3 34444443 466888888864 3 4
Q ss_pred H---------HHHHHHHHHhhcccCCCCCEEEec
Q 033269 96 E---------HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 96 t---------~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. .-..+++.|++++ ++||.+.+
T Consensus 186 ~v~~~~~l~w~~~~l~~~L~~~~---~~pV~v~N 216 (429)
T 1z05_A 186 IVLQMPHYNVKNLALGPEIYKAT---GLPVFVAN 216 (429)
T ss_dssp EEEECSSSBCSSBCHHHHHHHHH---CSCEEEEE
T ss_pred eEeecCCCCCCCCCHHHHHHHHh---CCCEEEec
Confidence 3 1135678888888 89988765
No 34
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=88.42 E-value=1 Score=34.83 Aligned_cols=85 Identities=21% Similarity=0.189 Sum_probs=55.6
Q ss_pred CCceEEEEecCCCeEEEEEeeCCCceeecceeeeCc---c-cc-c-chHHHHh-----hcCcCeEEEeccCC-C---hH-
Q 033269 33 AGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA---K-AD-Q-ELPQLIE-----KHKVLGMVVNMPKE-H---HE- 96 (123)
Q Consensus 33 ~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~---~-~~-~-~L~~li~-----~~~i~~iVVGlP~~-d---Gt- 96 (123)
....++|+|+|..++=+++.|..+.+.. ...++.. + .. + .+.+.++ ..++.+|.||.|=. | |.
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~il~-~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~v 95 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGEIQN-ATRFMTADWVNGIGFVESMKLEIGNFLKQYPIVKGVGIGWPGLVSLDRTKV 95 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCCEEE-EEEEEHHHHHTTTCHHHHHHHHHHHHHHHCTTCCEEEEEESSEECTTSCCE
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCcEEE-EEEEeCCCCCCHHHHHHHHHHHHHHHHhccCCeeEEEEEecccEECCCCEE
Confidence 3578999999999999999998887544 2334321 1 12 2 4444443 35799999999854 4 32
Q ss_pred ---------HHHHHHHHHhhcccCCCCCEEEec
Q 033269 97 ---------HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 97 ---------~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.-..+.+.|+++++ ++||.+.+
T Consensus 96 ~~~~~l~~w~~~~l~~~l~~~~~--~~pV~v~N 126 (321)
T 3r8e_A 96 ILLPNIPSVVNVPIVEILRSEFP--HIHFKIEN 126 (321)
T ss_dssp EEBTTBCCCCSCCHHHHHHHHCT--TSEEEEEE
T ss_pred EeCCCCccccCCCHHHHHHHHcC--CCCEEEEc
Confidence 11345677888875 68887754
No 35
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=87.67 E-value=1.8 Score=34.42 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=53.4
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeC------------cc-ccc--chHHHHhh-----cCcCeEEEec-cC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDR------------AK-ADQ--ELPQLIEK-----HKVLGMVVNM-PK 92 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~------------~~-~~~--~L~~li~~-----~~i~~iVVGl-P~ 92 (123)
+|.|||||--...+++|+.+....++.-...+.+ .. +.+ .+++++++ .+++.|.++. |-
T Consensus 5 ~M~iLgIdts~~~~svAl~~~~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG 84 (334)
T 3eno_A 5 PMIVLGLEGTAHTISCGIIDESRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPG 84 (334)
T ss_dssp CCEEEEEECSSSEEEEEEEESSCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSS
T ss_pred CceEEEEECCCcCeEEEEEECCEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCC
Confidence 5899999999999999999966555442111110 00 122 56666655 4689999983 32
Q ss_pred C-ChH-HHHHHHHHHhhcccCCCCCEEEec
Q 033269 93 E-HHE-HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 93 ~-dGt-~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
. -|- ....+++.|...+ ++|++.++
T Consensus 85 ~~t~lrvg~~~ak~La~~~---~~Pl~~v~ 111 (334)
T 3eno_A 85 LAPSLRVTATAARTISVLT---GKPIIGVN 111 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHH---TCCCEEEC
T ss_pred CcchHHHHHHHHHHHhhcc---CCCeEEec
Confidence 2 222 5556777777666 77887664
No 36
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=87.09 E-value=1.7 Score=36.34 Aligned_cols=84 Identities=14% Similarity=0.127 Sum_probs=51.8
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecce-eee--------Cc--c---ccc--chHHHHhh---cCcCeEEEec-cCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLT-KFD--------RA--K---ADQ--ELPQLIEK---HKVLGMVVNM-PKE 93 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~-~i~--------~~--~---~~~--~L~~li~~---~~i~~iVVGl-P~~ 93 (123)
+|++||||--...+++|+.+..+.+..... ... .. . +.+ -+.+++++ .+++.|+++. |=.
T Consensus 5 ~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~~~~~~id~ia~~~gPG~ 84 (540)
T 3en9_A 5 PMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQGPGL 84 (540)
T ss_dssp SCEEEEEECSSSEEEEEEEETTSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEESSC
T ss_pred cceEEEEEcCccceEEEEEECCCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCHhHCcEEEEecCCCc
Confidence 489999999999999999997744333221 111 00 0 112 33444443 4789998873 333
Q ss_pred -ChH-HHHHHHHHHhhcccCCCCCEEEec
Q 033269 94 -HHE-HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 94 -dGt-~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
-|- ....+|+.|+... ++|++-++
T Consensus 85 ~~~l~vg~~~ak~la~~~---~~p~~~v~ 110 (540)
T 3en9_A 85 GPSLRVTATVARTLSLTL---KKPIIGVN 110 (540)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCCEEEEE
T ss_pred hhhHHHHHHHHHHHHHHh---CCCeeEec
Confidence 222 5566777777666 78877654
No 37
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=86.93 E-value=1 Score=34.93 Aligned_cols=86 Identities=14% Similarity=0.159 Sum_probs=54.0
Q ss_pred CCCCceEEEEecCCCeEEEEEeeCCCceeecceeeeCc-c--ccc-chH----HHHhh-----cCcCeEEEeccCC-C--
Q 033269 31 ENAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA-K--ADQ-ELP----QLIEK-----HKVLGMVVNMPKE-H-- 94 (123)
Q Consensus 31 ~~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~-~--~~~-~L~----~li~~-----~~i~~iVVGlP~~-d-- 94 (123)
.++.+.++|+|+|..++=+++.|..+.+..- ...+.. + ..+ .+. +++.+ .++.+|.||.|=. |
T Consensus 26 ~~~~~~~lgiDiGgt~i~~~l~d~~G~il~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~ 104 (343)
T 2yhw_A 26 FQGTLSALAVDLGGTNLRVAIVSMKGEIVKK-YTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPR 104 (343)
T ss_dssp --CEEEEEEEEECSSEEEEEEEETTSCEEEE-EEEECCSSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETT
T ss_pred eCCCcEEEEEEECCCEEEEEEECCCCcEEEE-EEEcCCCCHHHHHHHHHHHHHHHHHhcccccCceEEEEEecccCEeCC
Confidence 3445789999999999999999988875432 233322 1 112 333 33332 3577888988764 3
Q ss_pred -hHH-----H------HHHHHHHhhcccCCCCCEEEec
Q 033269 95 -HEH-----V------SSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 95 -Gt~-----v------~~f~~~L~~~~~~~~lpV~l~D 120 (123)
|.. . ..+.+.|++++ ++||.+.+
T Consensus 105 ~g~v~~~~~~~~~w~~~~l~~~l~~~~---~~pv~v~N 139 (343)
T 2yhw_A 105 EGIVLHSTKLIQEWNSVDLRTPLSDTL---HLPVWVDN 139 (343)
T ss_dssp TTEEEECCTTSSSCSSEECHHHHHHHH---CSCEEEEE
T ss_pred CCEEEeCCcCCCCCcCCCHHHHHHHHH---CCCEEEec
Confidence 320 1 23467888888 78988765
No 38
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=85.53 E-value=0.4 Score=37.59 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=17.4
Q ss_pred CceEEEEecCCCeEEEEEeeC
Q 033269 34 GLGILGLDVGNKYIGVSLFKR 54 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~ 54 (123)
|+.++|||+|+..+++|+.+.
T Consensus 1 m~~~vGIDlGTt~s~va~~~~ 21 (383)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIMDG 21 (383)
T ss_dssp --CCCEEECCSSEEEEEEEET
T ss_pred CCcEEEEEcCCCCEEEEEEEC
Confidence 567899999999999999864
No 39
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=83.85 E-value=1.1 Score=33.71 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=22.8
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceee
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVE 60 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~ 60 (123)
|.+||||.|+..|=+|+.|..+.+..
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~il~ 26 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGEDIVA 26 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEE
T ss_pred CeEEEEEcCccEEEEEEEECCCeEEE
Confidence 67899999999999999998887654
No 40
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=83.70 E-value=7.8 Score=28.51 Aligned_cols=80 Identities=15% Similarity=0.203 Sum_probs=42.5
Q ss_pred ceEEEEecCCCeEEEEEeeCCCce-eec---ceeeeCcc-cc-------c-chHHHHhh---cCcCeEEEeccCC-ChHH
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNE-VEP---LTKFDRAK-AD-------Q-ELPQLIEK---HKVLGMVVNMPKE-HHEH 97 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~-a~P---l~~i~~~~-~~-------~-~L~~li~~---~~i~~iVVGlP~~-dGt~ 97 (123)
..++|||.|+..+=+++.|..+.+ ... -..+.... .+ + .+.+.... ..+..+|+..|.. .. .
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~-~ 106 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVG-R 106 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC----
T ss_pred CEEEEEEcccceEEEEEECCCCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCH-H
Confidence 468999999999999998866542 211 11111110 11 1 22222222 3567899999986 32 2
Q ss_pred HHHHHHHHhhcccCCCCCEEE
Q 033269 98 VSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 98 v~~f~~~L~~~~~~~~lpV~l 118 (123)
.+++.+...+.. ++++..
T Consensus 107 ~~~~~~~~~~~~---g~~~~~ 124 (272)
T 3h1q_A 107 NAEACGHVVAGA---GLELVT 124 (272)
T ss_dssp CTTHHHHHHHHT---TCEEEE
T ss_pred HHHHHHHHHHHc---CCeeee
Confidence 233444444444 666543
No 41
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=83.56 E-value=1.3 Score=33.45 Aligned_cols=54 Identities=13% Similarity=0.230 Sum_probs=37.6
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc----cc-c-chHHHHhhcCcCeEEEeccCC
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----AD-Q-ELPQLIEKHKVLGMVVNMPKE 93 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~-~-~L~~li~~~~i~~iVVGlP~~ 93 (123)
+.++|+|+|..++=+ .|..+.+. ..++... .. + .+.++++++++.++-||.|=.
T Consensus 6 ~~~lgiDIGGT~i~~--~d~~g~~~---~~~~t~~~~~~~~~~~~i~~~i~~~~i~gigi~~pG~ 65 (226)
T 3lm2_A 6 QTVLAIDIGGSHVKI--GLSTDGEE---RKVESGKTMTGPEMVAAVTAMAKDMTYDVIAMGYPGP 65 (226)
T ss_dssp CCEEEEEECSSEEEE--EETTTCCE---EEEECCTTCCHHHHHHHHHHHTTTCCCSEEEEEESSC
T ss_pred CEEEEEEECCCEEEE--EECCCCEE---EEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEEEEeE
Confidence 468999999998884 56666541 2232111 22 3 778888888999999999866
No 42
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=83.03 E-value=6.5 Score=30.34 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=47.8
Q ss_pred EEEEecCCCeEEEEEeeCCCceeecceeeeCcc----ccc--chHHHHhhc-----CcCeEEEeccCCChHHHHHHHHHH
Q 033269 37 ILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----ADQ--ELPQLIEKH-----KVLGMVVNMPKEHHEHVSSFIEQL 105 (123)
Q Consensus 37 iLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~~--~L~~li~~~-----~i~~iVVGlP~~dGt~v~~f~~~L 105 (123)
+|+||+|..++=+|+.|....+.. ..+..+. ..+ .+.++++.+ +++++++--+. -.....+.+.+
T Consensus 2 lL~IDIGNT~ik~gl~~~~~l~~~--~r~~T~~~~t~de~~~~l~~ll~~~~~~~~~i~~iiISSVv--p~~~~~l~~~~ 77 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGELRQH--WRMETDRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVSSVV--PPIMFALERMC 77 (268)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEE--EEEECCTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEEESC--HHHHHHHHHHH
T ss_pred EEEEEECcCcEEEEEEECCEEEEE--EEecCCCcCCHHHHHHHHHHHHHHcCCCcccCcEEEEEccC--hhHHHHHHHHH
Confidence 699999999999999995544333 2222111 123 677777765 47889887442 22444555566
Q ss_pred hhcccCCCCCEEEec
Q 033269 106 DGNEIYRGLPFCYFQ 120 (123)
Q Consensus 106 ~~~~~~~~lpV~l~D 120 (123)
++.+ ++++.++.
T Consensus 78 ~~~~---~~~~~~v~ 89 (268)
T 2h3g_X 78 EKYF---KIKPLVVG 89 (268)
T ss_dssp HHHT---CCCCEECS
T ss_pred HHHh---CCCeEEEc
Confidence 6655 56655553
No 43
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=82.32 E-value=1.8 Score=33.02 Aligned_cols=24 Identities=21% Similarity=0.389 Sum_probs=21.3
Q ss_pred eEEEEecCCCeEEEEEeeCCCcee
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~a 59 (123)
.++|+|.|..++=+++.|..+.+.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~il 35 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTPL 35 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCEE
T ss_pred EEEEEEcCccceEEEEEcCCCCEE
Confidence 689999999999999999887654
No 44
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=81.98 E-value=4.5 Score=31.80 Aligned_cols=86 Identities=15% Similarity=0.237 Sum_probs=55.2
Q ss_pred CCCceEEEEecCCCeEEEEEeeCCCceeecceeeeCc----------c-----------ccc-chHHHHhhcCcCeEE-E
Q 033269 32 NAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA----------K-----------ADQ-ELPQLIEKHKVLGMV-V 88 (123)
Q Consensus 32 ~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~----------~-----------~~~-~L~~li~~~~i~~iV-V 88 (123)
.|+|++-+||.|+-.+=+.+.+....-..++...... . ..+ .+.+++++++++.+. +
T Consensus 9 ~~~m~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~~i~~v 88 (315)
T 1t6c_A 9 KPIMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERVKAV 88 (315)
T ss_dssp -CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcEEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3457999999999999999998654322222222110 0 013 677788899998655 5
Q ss_pred eccCC-ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 89 NMPKE-HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 89 GlP~~-dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
+--=- +-.....|.+++++.+ +++|...+
T Consensus 89 ATsA~R~A~N~~~fl~~v~~~~---G~~i~vIs 118 (315)
T 1t6c_A 89 ATEAIRRAKNAEEFLERVKREV---GLVVEVIT 118 (315)
T ss_dssp ECHHHHTSTTHHHHHHHHHHHT---CCCEEECC
T ss_pred EcHHHHcCcCHHHHHHHHHHHH---CCCEEEcC
Confidence 51000 1116678999999888 88888765
No 45
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=81.61 E-value=1.1 Score=38.15 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=18.2
Q ss_pred CceEEEEecCCCeEEEEEeeC
Q 033269 34 GLGILGLDVGNKYIGVSLFKR 54 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~ 54 (123)
|+.++|||+|+..+++|+.+.
T Consensus 1 M~~viGIDlGTT~S~Va~~~~ 21 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDG 21 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEET
T ss_pred CCcEEEEEcCCCcEEEEEEEC
Confidence 678999999999999999764
No 46
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=79.80 E-value=1.2 Score=34.65 Aligned_cols=22 Identities=27% Similarity=0.508 Sum_probs=19.1
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
+..++|||+|+..+++|+.+..
T Consensus 17 ~~~viGID~GTt~s~va~~~~g 38 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNG 38 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSS
T ss_pred CCCEEEEEeCcCcEEEEEEECC
Confidence 5678999999999999998744
No 47
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=79.32 E-value=1.2 Score=37.42 Aligned_cols=22 Identities=27% Similarity=0.520 Sum_probs=19.5
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
|+.++|||+|+..+++|+.+..
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g 24 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHG 24 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSS
T ss_pred CCCEEEEEeCcccEEEEEEECC
Confidence 6779999999999999998754
No 48
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=78.75 E-value=1.3 Score=34.98 Aligned_cols=22 Identities=27% Similarity=0.667 Sum_probs=18.7
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
.+.++|||+|+..+++|+.+..
T Consensus 22 ~~~viGID~GTt~s~va~~~~g 43 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHG 43 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETT
T ss_pred cCCEEEEEcCCccEEEEEEECC
Confidence 4678999999999999998754
No 49
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=78.75 E-value=1.1 Score=38.89 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=18.7
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
||.++|||+|+..+.+|+.+..
T Consensus 1 Mm~~iGIDlGTtns~va~~~~g 22 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNR 22 (675)
T ss_dssp -CCCEEEECCSSEEEEEEEETT
T ss_pred CCcEEEEEcCCCcEEEEEEECC
Confidence 6779999999999999997644
No 50
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=78.28 E-value=1.8 Score=32.92 Aligned_cols=79 Identities=11% Similarity=-0.025 Sum_probs=41.3
Q ss_pred EEEEecCCCeEEEEEeeCCCceeecceeeeC----c-c-c-cc-chHHHHh----hcCcCeEEEeccCCChHHHHHHHHH
Q 033269 37 ILGLDVGNKYIGVSLFKRHGNEVEPLTKFDR----A-K-A-DQ-ELPQLIE----KHKVLGMVVNMPKEHHEHVSSFIEQ 104 (123)
Q Consensus 37 iLglD~G~kriGlAvsD~~~~~a~Pl~~i~~----~-~-~-~~-~L~~li~----~~~i~~iVVGlP~~dGt~v~~f~~~ 104 (123)
++|||.|..+|=.++.| .+.+..- ...+. . . . .+ .+.++++ ..++..+.||.|=-..+.-..+.+.
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~il~~-~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~igig~pG~~~~~~~~l~~~ 79 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGAVIKR-LGTKGINPFFQSEEEIQQKLTASLLPQLPEGKFNAVYFYGAGCTPEKAPVLRRA 79 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSSEEEE-EEECCCCTTTSCSTTTTTTTTC-------------CEEECTTCCTTTTHHHHHH
T ss_pred EEEEEeccccEEEEEEc-CCeEEEE-EECCCCCcccCCHHHHHHHHHHHHHHhcCcccccEEEEEcCCCCHHHHHHHHHH
Confidence 68999999999999999 7764431 12211 1 1 1 12 4444443 3567889999874320011267777
Q ss_pred HhhcccCCC--CCEEEec
Q 033269 105 LDGNEIYRG--LPFCYFQ 120 (123)
Q Consensus 105 L~~~~~~~~--lpV~l~D 120 (123)
|++++ + .||.+.+
T Consensus 80 l~~~~---~~~~pv~v~N 94 (291)
T 1zxo_A 80 IADSL---PVIGNIKANS 94 (291)
T ss_dssp HHHHS---CCCSCCEEEC
T ss_pred HHHhc---CCCceEEEEC
Confidence 88777 5 5877654
No 51
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=78.16 E-value=1.7 Score=36.03 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=19.2
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
|+.++|||+|+..+++|+.+..
T Consensus 1 m~~~iGIDlGTt~s~va~~~~g 22 (509)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVLEGG 22 (509)
T ss_dssp CCCEEEEEECSSEEEEEEEETT
T ss_pred CCCEEEEEcCCceEEEEEEECC
Confidence 5679999999999999998754
No 52
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=78.12 E-value=11 Score=28.67 Aligned_cols=70 Identities=14% Similarity=0.032 Sum_probs=41.8
Q ss_pred eEEEEecCCCeEEEEEeeCCCceeecceeeeCcc----ccc--chHHHHh--hcCcCeEEEeccCCChHHHHHHHHHHhh
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----ADQ--ELPQLIE--KHKVLGMVVNMPKEHHEHVSSFIEQLDG 107 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~~--~L~~li~--~~~i~~iVVGlP~~dGt~v~~f~~~L~~ 107 (123)
.+|+||+|..++=.|+.|........ .++.+. ..+ .+.++++ .+++++++|.-|-. .....+.+.+++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~l~~~~--r~~T~~~~t~de~~~~l~~l~~~~~~~i~~i~IsSVvp--~~~~~~~~~~~~ 79 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGKTFRRW--RLSTGVFQTEDELFSHLHPLLGDAMREIKGIGVASVVP--TQNTVIERFSQK 79 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSSSCEEE--EEECCTTCCHHHHHHHHHHHHGGGGGGEEEEEEEESCH--HHHHHHHHHHHH
T ss_pred eEEEEEECCCeEEEEEEECCEEEEEE--EecCCCCCCHHHHHHHHHHHHhhccccCCEEEEEcCcH--HHHHHHHHHHHH
Confidence 57999999999999999855444332 222111 122 5666664 35688899985543 123334444444
Q ss_pred cc
Q 033269 108 NE 109 (123)
Q Consensus 108 ~~ 109 (123)
.+
T Consensus 80 ~~ 81 (249)
T 3bex_A 80 YF 81 (249)
T ss_dssp HH
T ss_pred hc
Confidence 44
No 53
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=77.47 E-value=1.6 Score=34.56 Aligned_cols=19 Identities=16% Similarity=0.282 Sum_probs=17.1
Q ss_pred ceEEEEecCCCeEEEEEee
Q 033269 35 LGILGLDVGNKYIGVSLFK 53 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD 53 (123)
+.++|||+|+.++++|+..
T Consensus 13 ~~vvGIDlGTt~s~va~~~ 31 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTV 31 (409)
T ss_dssp CCEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEcCCCeEEEEEEe
Confidence 5689999999999999973
No 54
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=76.91 E-value=1.5 Score=37.42 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=17.2
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
|+.++|||+|+..+++|+.+..
T Consensus 1 m~~viGIDlGTt~s~va~~~~g 22 (605)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIMDGT 22 (605)
T ss_dssp ---CEEEECCSSEEEEEEEETT
T ss_pred CCCEEEEEcCCcCEEEEEEECC
Confidence 5678999999999999998743
No 55
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=74.56 E-value=1.9 Score=35.99 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=24.7
Q ss_pred ccCCCCceEEEEecCCCeEEEEEeeCCCce
Q 033269 29 VGENAGLGILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 29 ~~~~~~~riLglD~G~kriGlAvsD~~~~~ 58 (123)
+.....++++|||.|...+=+++.+..+..
T Consensus 55 P~G~E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 55 VSGAQAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCSCCCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred CCCCccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 344446889999999999999999987765
No 56
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=74.52 E-value=3.6 Score=31.21 Aligned_cols=79 Identities=13% Similarity=-0.016 Sum_probs=47.6
Q ss_pred EEEEecCCCeEEEEEeeCCCceeecceeeeCc-----c-c-cc-chHHHHhh------cCcCeEEEeccCCChHHHHHHH
Q 033269 37 ILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA-----K-A-DQ-ELPQLIEK------HKVLGMVVNMPKEHHEHVSSFI 102 (123)
Q Consensus 37 iLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~-----~-~-~~-~L~~li~~------~~i~~iVVGlP~~dGt~v~~f~ 102 (123)
++|||.|..+|=.++.| .+.+..- ...+.. . . .+ .+.+.+++ .++.++.||.|=-.-+.-..+.
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~il~~-~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~~igig~pG~~~~~~~~l~ 79 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGKSLGR-FQTSGINPFQQDRNEIDTALRSEVLPAIGQKASSIRAVYFYGAGCTPAKAPMLN 79 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEE-EEEECCCTTTSCHHHHHHHHTTTTHHHHTTSTTTCCEEEEEETTCCTTTHHHHH
T ss_pred EEEEEeCccceEEEEEe-CCeEEEE-EECCCCCcccCCHHHHHHHHHHHHHHHhCCCcccccEEEEECCCCChHHHHHHH
Confidence 69999999999999999 7764431 222211 1 1 12 34333332 3578899998753200113677
Q ss_pred HHHhhcccCCC--CCEEEec
Q 033269 103 EQLDGNEIYRG--LPFCYFQ 120 (123)
Q Consensus 103 ~~L~~~~~~~~--lpV~l~D 120 (123)
+.|++++ + .||.+.+
T Consensus 80 ~~l~~~~---~~~~pv~v~N 96 (291)
T 1zbs_A 80 EALDSML---PHCDRIEVAG 96 (291)
T ss_dssp HHHHHHS---TTCSEEEEEC
T ss_pred HHHHHhc---CCCCcEEEeC
Confidence 7888877 5 4776543
No 57
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=71.78 E-value=4.3 Score=30.88 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=22.1
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceee
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVE 60 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~ 60 (123)
|.+||||.|+.++-+++.|..+.+..
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~g~i~~ 28 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKEIVA 28 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEE
T ss_pred cEEEEEEeccceEEEEEEeCCCCEEE
Confidence 46899999999999999998776543
No 58
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=71.54 E-value=13 Score=28.94 Aligned_cols=83 Identities=10% Similarity=0.157 Sum_probs=53.1
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCc----------c-----------ccc-chHHHHhhcCcCeEE-Eecc
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA----------K-----------ADQ-ELPQLIEKHKVLGMV-VNMP 91 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~----------~-----------~~~-~L~~li~~~~i~~iV-VGlP 91 (123)
+++-+||.|+-.+=+.+.+....-..++...... . ..+ .+.+++++|+++.+. ++--
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~~v~~vATs 83 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVVHVIATGTS 83 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECH
T ss_pred ceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeeH
Confidence 5788999999999999987543222222221100 0 013 677888899998664 5510
Q ss_pred CC-ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 92 KE-HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 92 ~~-dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
-- +-.....|.+++++.+ +++|...+
T Consensus 84 A~R~A~N~~~fl~~i~~~t---G~~i~vIs 110 (315)
T 3mdq_A 84 AVRSGSNKQVLIDRIKKEV---NIDVEVID 110 (315)
T ss_dssp HHHHCTTHHHHHHHHHHHH---CCCEEECC
T ss_pred HHHcCcCHHHHHHHHHHHH---CCCeEEeC
Confidence 00 1116678999999988 89988765
No 59
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=70.95 E-value=4.3 Score=33.90 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=22.9
Q ss_pred cCCCCceEEEEecCCCeEEEEEeeCCCce
Q 033269 30 GENAGLGILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 30 ~~~~~~riLglD~G~kriGlAvsD~~~~~ 58 (123)
.+++|..+||||.|+.-+=.++.|..+.+
T Consensus 5 ~~~~~~~~lgID~GTts~Ka~l~d~~G~v 33 (538)
T 4bc3_A 5 EHAPRRCCLGWDFSTQQVKVVAVDAELNV 33 (538)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETTCCE
T ss_pred cCCCCCEEEEEEEcCcCEEEEEECCCCCE
Confidence 46678899999999999999999988864
No 60
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=68.24 E-value=14 Score=28.62 Aligned_cols=58 Identities=16% Similarity=0.259 Sum_probs=35.8
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceee--eC----cc--cc----c-chHHHHhhc--CcCeEEEeccC
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKF--DR----AK--AD----Q-ELPQLIEKH--KVLGMVVNMPK 92 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i--~~----~~--~~----~-~L~~li~~~--~i~~iVVGlP~ 92 (123)
..++|||+|+.++-+++..........+... +. +. .+ . .|++++.+. ++..+++++|-
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~~~~~~~v~~~i~~ 85 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVVTALSN 85 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHHHTCCCCEEEEEECG
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHHcCCCcceEEEEecC
Confidence 4689999999999999886333222212222 11 11 11 3 677777765 46678888875
No 61
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=67.79 E-value=14 Score=23.89 Aligned_cols=45 Identities=16% Similarity=0.067 Sum_probs=33.4
Q ss_pred chHHHHhhcCcCeEEEeccCCCh-HHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHH-EHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dG-t~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.|.+.+++++++.||+|-. ..+ ...-..++++-... +.||..+.+
T Consensus 93 ~I~~~a~~~~~dliV~G~~-~~~~~~lgs~~~~vl~~~---~~pVlvv~~ 138 (141)
T 1jmv_A 93 VLSDAIEQYDVDLLVTGHH-QDFWSKLMSSTRQVMNTI---KIDMLVVPL 138 (141)
T ss_dssp HHHHHHHHTTCCEEEEEEC-CCCHHHHHHHHHHHHTTC---CSEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEeCC-CchhhhhcchHHHHHhcC---CCCEEEeeC
Confidence 8888999999999999987 622 23345667776665 689888754
No 62
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=67.06 E-value=13 Score=24.54 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=33.4
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.+.+++++++++.++|..|..+....+++++.+.+. ++.|.++
T Consensus 56 ~l~~~~~~~~id~viia~~~~~~~~~~~i~~~l~~~----gv~v~~v 98 (141)
T 3nkl_A 56 YLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKL----HVEVLTI 98 (141)
T ss_dssp GHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTT----TCEEEEC
T ss_pred HHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHc----CCeEEEC
Confidence 788899999999999999977555777888888753 4565544
No 63
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=65.94 E-value=14 Score=29.28 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=53.1
Q ss_pred CCceEEEEecCCCeEEEEEeeCC-CceeecceeeeCc----------c-----------ccc-chHHHHhhcCcCeEEEe
Q 033269 33 AGLGILGLDVGNKYIGVSLFKRH-GNEVEPLTKFDRA----------K-----------ADQ-ELPQLIEKHKVLGMVVN 89 (123)
Q Consensus 33 ~~~riLglD~G~kriGlAvsD~~-~~~a~Pl~~i~~~----------~-----------~~~-~L~~li~~~~i~~iVVG 89 (123)
.++++-+||.|+-.|=+.+.+.. .....++...... . ..+ .+.+++++|+++.+.+=
T Consensus 14 ~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~~~~v~~v~~v 93 (343)
T 3cer_A 14 ESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPIDGLRFV 93 (343)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHTTSCCSEEEEE
T ss_pred CCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 35789999999999999999864 2111222111100 0 113 67778889999855443
Q ss_pred ccCCChH-------HHHHHHHHHhhcccCCCCCEEEec
Q 033269 90 MPKEHHE-------HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 90 lP~~dGt-------~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
+| ....|.+++++.+ +++|...+
T Consensus 94 -----ATsA~R~A~N~~~fl~~v~~~t---Gi~ieVIs 123 (343)
T 3cer_A 94 -----ATSATRDAENREEFEDEIERIL---GVRPEVIP 123 (343)
T ss_dssp -----ECHHHHHCTTHHHHHHHHHHHH---SSCCEECC
T ss_pred -----ecHHHHcCcCHHHHHHHHHHHH---CCCEEEeC
Confidence 23 5678999999988 88888765
No 64
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=65.51 E-value=5.8 Score=32.86 Aligned_cols=28 Identities=25% Similarity=0.374 Sum_probs=22.3
Q ss_pred CCCceEEEEecCCCeEEEEEeeCCCcee
Q 033269 32 NAGLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 32 ~~~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
+.|..+||||+|+..+=.++.|..+.+.
T Consensus 4 ~~~~~~lgIDiGtts~k~~l~d~~G~il 31 (508)
T 3ifr_A 4 AQGRQVIGLDIGTTSTIAILVRLPDTVV 31 (508)
T ss_dssp ---CEEEEEEECSSEEEEEEEETTTEEE
T ss_pred ccCCEEEEEEecCcceEEEEECCCCCEE
Confidence 3467899999999999999999888643
No 65
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=65.10 E-value=6.9 Score=32.42 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=23.1
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
|+.+||||.|+..+=.++.|..+.+.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il 27 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANII 27 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEE
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEE
Confidence 67899999999999999999988653
No 66
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=64.65 E-value=6.9 Score=32.70 Aligned_cols=26 Identities=27% Similarity=0.438 Sum_probs=23.0
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
|..+||||.|+..+=.++.|..+.+.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il 29 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMV 29 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEE
T ss_pred CcEEEEEEECcccEEEEEECCCCCEE
Confidence 67899999999999999999888643
No 67
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=64.54 E-value=24 Score=29.43 Aligned_cols=86 Identities=10% Similarity=0.125 Sum_probs=55.6
Q ss_pred CCCceEEEEecCCCeEEEEEeeCCCceeecceeee---C-c------c-----------ccc-chHHHHhhcCcCeEE-E
Q 033269 32 NAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFD---R-A------K-----------ADQ-ELPQLIEKHKVLGMV-V 88 (123)
Q Consensus 32 ~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~---~-~------~-----------~~~-~L~~li~~~~i~~iV-V 88 (123)
....++-+||.|+-.+=+.+.+.......++.... + . + ..+ .+.++++.++++.+. |
T Consensus 12 ~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~~v~~v 91 (508)
T 3hi0_A 12 TGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQKLYVL 91 (508)
T ss_dssp TTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 33578999999999999999986643222222111 1 0 0 013 677788899998664 5
Q ss_pred eccCC-ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 89 NMPKE-HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 89 GlP~~-dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
+---- +-+....|.+++++.+ +++|...+
T Consensus 92 ATsA~R~A~N~~~fl~~i~~~t---G~~ievIs 121 (508)
T 3hi0_A 92 ATAAAREAENGPDFIREAEAIL---GCEIEVLS 121 (508)
T ss_dssp ECTHHHHSTTHHHHHHHHHHHH---TSCEEECC
T ss_pred eeHHHHcCcCHHHHHHHHHHHH---CCCeEEec
Confidence 51000 1116788999999988 89998875
No 68
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=63.23 E-value=7.9 Score=31.86 Aligned_cols=28 Identities=32% Similarity=0.357 Sum_probs=22.9
Q ss_pred CCCc-eEEEEecCCCeEEEEEeeCCCcee
Q 033269 32 NAGL-GILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 32 ~~~~-riLglD~G~kriGlAvsD~~~~~a 59 (123)
|.|+ .+||||.|+..+=+++.|..+.+.
T Consensus 2 ~aM~~~~lgIDiGtts~k~~l~d~~G~il 30 (501)
T 3g25_A 2 NAMEKYILSIDQGTTSSRAILFNQKGEIA 30 (501)
T ss_dssp -CCCCEEEEEEECSSEEEEEEECTTSCEE
T ss_pred cccccEEEEEEeCccceEEEEEcCCCCEE
Confidence 3454 689999999999999999988653
No 69
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=63.11 E-value=7.2 Score=32.26 Aligned_cols=26 Identities=31% Similarity=0.411 Sum_probs=22.6
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
|+.+||||.|+..+=.++.|..+.+.
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~G~il 28 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDINGKAV 28 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETTSCEE
T ss_pred CCEEEEEEecCCceEEEEEcCCCCEE
Confidence 55799999999999999999988643
No 70
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=62.70 E-value=7.7 Score=32.12 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.7
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
|..+||||.|+..+=+++.|..+.+.
T Consensus 4 m~~~lgIDiGtts~k~~l~d~~G~il 29 (511)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLH 29 (511)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEE
T ss_pred ccEEEEEEeCCCceEEEEECCCCCEE
Confidence 56799999999999999999888643
No 71
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=62.38 E-value=4.9 Score=33.30 Aligned_cols=23 Identities=26% Similarity=0.278 Sum_probs=21.0
Q ss_pred CceEEEEecCCCeEEEEEeeCCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHG 56 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~ 56 (123)
.+++||||.|...+=+++.+..+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 48899999999999999999877
No 72
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=62.21 E-value=6.5 Score=30.58 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=19.4
Q ss_pred CCceEEEEecCCCeEEEEEeeC
Q 033269 33 AGLGILGLDVGNKYIGVSLFKR 54 (123)
Q Consensus 33 ~~~riLglD~G~kriGlAvsD~ 54 (123)
+..+|++||+|.+....|..++
T Consensus 38 ~~~sIlSID~GikNlAyc~l~~ 59 (258)
T 1kcf_A 38 PTSRVLGIDLGIKNFSYCFASQ 59 (258)
T ss_dssp CCSSEEEEEECSTTEEEEEEEE
T ss_pred CCCcEEEEecCCCceEEEEEcc
Confidence 3349999999999999999995
No 73
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=60.37 E-value=8.5 Score=31.63 Aligned_cols=25 Identities=20% Similarity=0.123 Sum_probs=22.1
Q ss_pred CceEEEEecCCCeEEEEEeeCCCce
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~ 58 (123)
|..+||||.|+..+=+++.|..+.+
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~g~i 27 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEELNI 27 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETTCCE
T ss_pred ccEEEEEEeCCcceEEEEECCCCCE
Confidence 5568999999999999999988864
No 74
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=59.70 E-value=11 Score=31.10 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=22.8
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
|..+||||.|+..+=+++.|..+.+.
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~G~il 29 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRNGKKI 29 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEE
T ss_pred CCEEEEEEcCCCceEEEEECCCCCEE
Confidence 56899999999999999999988643
No 75
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=59.62 E-value=8.1 Score=31.69 Aligned_cols=25 Identities=28% Similarity=0.283 Sum_probs=21.0
Q ss_pred CceEEEEecCCCeEEEEEeeCCCce
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~ 58 (123)
|..++|||+|+..+=.++.|..+.+
T Consensus 1 M~~~lgiDiGtT~~k~~l~d~~g~i 25 (495)
T 2dpn_A 1 MAFLLALDQGTTSSRAILFTLEGRP 25 (495)
T ss_dssp --CEEEEEECSSEEEEEEECTTSCE
T ss_pred CcEEEEEeeCCcceEEEEECCCCCE
Confidence 4568999999999999999988864
No 76
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=58.87 E-value=5.1 Score=30.75 Aligned_cols=19 Identities=26% Similarity=0.216 Sum_probs=15.6
Q ss_pred ceEEEEecCCCeEEEEEee
Q 033269 35 LGILGLDVGNKYIGVSLFK 53 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD 53 (123)
+.++|||+|+..+-+|+.+
T Consensus 3 ~~~igIDlGT~~s~v~~~~ 21 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRG 21 (344)
T ss_dssp -CEEEEEECSSEEEEEETT
T ss_pred CceEEEEcCcCcEEEEECC
Confidence 4689999999999888754
No 77
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=58.63 E-value=10 Score=31.47 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=21.4
Q ss_pred eEEEEecCCCeEEEEEeeCCCcee
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~a 59 (123)
.+||||+|+..+=+++.|..+.+.
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~il 50 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQKIA 50 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEE
T ss_pred eEEEEEeCCcceEEEEECCCCCEE
Confidence 689999999999999999988643
No 78
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=58.26 E-value=18 Score=30.24 Aligned_cols=84 Identities=6% Similarity=0.121 Sum_probs=52.4
Q ss_pred CceEEEEecCCCeEEEEEeeCCCceeecceeeeCc----------c-----------ccc-chHHHHhhcCcCe-EEEec
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRA----------K-----------ADQ-ELPQLIEKHKVLG-MVVNM 90 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~----------~-----------~~~-~L~~li~~~~i~~-iVVGl 90 (123)
.+++-+||.|+-.+=+.|.+.......++...... + ..+ .+.+++++++++. .+|+-
T Consensus 10 ~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~~v~~vAT 89 (513)
T 1u6z_A 10 PQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGT 89 (513)
T ss_dssp --CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEC
T ss_pred CCeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 46799999999999999998654322222222110 0 013 6677778899874 45551
Q ss_pred cCC-ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 91 PKE-HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 91 P~~-dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
--- +-+....|.+++++.+ +++|...+
T Consensus 90 sA~R~A~N~~~fl~~i~~~t---G~~i~vIs 117 (513)
T 1u6z_A 90 HTLRQALNATDFLKRAEKVI---PYPIEIIS 117 (513)
T ss_dssp HHHHHCTTHHHHHHHHTTTC---SSCEEECC
T ss_pred HHHHcCcCHHHHHHHHHHHH---CCCEEEeC
Confidence 000 0116678999999988 89998775
No 79
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=57.45 E-value=12 Score=31.10 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=35.8
Q ss_pred CceEEEEecCCCeEEEEEee-CCCceeecceeeeCc---cc---c-c-chHHHHhhc----CcCeEEEec
Q 033269 34 GLGILGLDVGNKYIGVSLFK-RHGNEVEPLTKFDRA---KA---D-Q-ELPQLIEKH----KVLGMVVNM 90 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD-~~~~~a~Pl~~i~~~---~~---~-~-~L~~li~~~----~i~~iVVGl 90 (123)
+..+||||.|+..+=.++.| ..+.+.. ....+.. ++ . + .+.+.+++. +|.+|-|+-
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~~G~i~~-~~~~~~~g~~e~d~~~~~~~i~~~l~~~~~~~~I~~Igis~ 72 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAETGELVR-FGQAKHPNGTSVDPSYWWSAFQEAAEQAGGLDDVSALAVGG 72 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETTTCCEEE-EEEEECCSSSEECTHHHHHHHHHHHHHTTCSTTEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEECCCCeEEE-EEEEeCCCCceECHHHHHHHHHHHHHhcCCccCceEEEEeC
Confidence 56799999999999999999 7776433 1222211 11 2 3 666777653 455665554
No 80
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=55.69 E-value=12 Score=30.67 Aligned_cols=24 Identities=29% Similarity=0.358 Sum_probs=21.1
Q ss_pred ceEEEEecCCCeEEEEEeeCCCce
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~ 58 (123)
..+||||+|+..+=.++.|..+.+
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~~g~~ 26 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRESNI 26 (497)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCE
T ss_pred cEEEEEecCCchhEEEEECCCCCE
Confidence 468999999999999999988764
No 81
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=55.56 E-value=6.8 Score=31.93 Aligned_cols=24 Identities=17% Similarity=0.091 Sum_probs=20.9
Q ss_pred CceEEEEecCCCeEEEEEeeCCCc
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGN 57 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~ 57 (123)
|+.+||||+|+..+=.++.|..+.
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g~ 26 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYERE 26 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEGG
T ss_pred cceEEEEEecCCCceEEEEEecCc
Confidence 567999999999999999997664
No 82
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=55.40 E-value=8.4 Score=31.93 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=20.5
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
|..+||||.|+..+=.++.|..+.+.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~ 30 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRML 30 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEE
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEE
Confidence 34689999999999999999888643
No 83
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=54.17 E-value=13 Score=31.29 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=21.4
Q ss_pred CceEEEEecCCCeEEEEEeeC-CCce
Q 033269 34 GLGILGLDVGNKYIGVSLFKR-HGNE 58 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~-~~~~ 58 (123)
|..+||||+|+..+=.++.|. .+.+
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i 29 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQE 29 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCE
T ss_pred CCEEEEEecCCcceEEEEEECCCCeE
Confidence 568999999999999999998 7764
No 84
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=52.33 E-value=5.4 Score=33.70 Aligned_cols=25 Identities=36% Similarity=0.462 Sum_probs=21.1
Q ss_pred CCceEEEEecCCCeEEEEEeeCCCc
Q 033269 33 AGLGILGLDVGNKYIGVSLFKRHGN 57 (123)
Q Consensus 33 ~~~riLglD~G~kriGlAvsD~~~~ 57 (123)
..+++||||.|...+=+++.+..+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3478999999999999999887664
No 85
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=51.99 E-value=38 Score=27.36 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=35.2
Q ss_pred eEEEEecCCCeEEEEEeeCCCce--ee-cceeeeCccccc--chHHHHhhcCcCeEEEeccCCChH----------HHHH
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNE--VE-PLTKFDRAKADQ--ELPQLIEKHKVLGMVVNMPKEHHE----------HVSS 100 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~--a~-Pl~~i~~~~~~~--~L~~li~~~~i~~iVVGlP~~dGt----------~v~~ 100 (123)
.++|+|+|...+=+|+.+.++.+ .+ |+...+. ...+ .|+++..+...-.+++ -|+ -|..
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~-~~~L~~~l~~~~~~~~~~avtM-----TgELaD~f~~k~eGV~~ 74 (334)
T 3cet_A 1 MILGIDIGGANTKITELHENGEFKVHHLYFPMWKN-NDKLAEVLKTYSNDVSHVALVT-----TAELADSYETKKEGVDN 74 (334)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC----------------------CCEEEEEE-----CCC------CTTHHHHH
T ss_pred CeeEEEecccceeeeeecCCCceEEEEEecCCcCC-chHHHHHHHHHHhhhccEEEEe-----chhhhhhhcCHHHHHHH
Confidence 37999999999999988877753 21 2222332 1222 4444444332223333 243 5666
Q ss_pred HHHHHhhcccCCCCCEEEec
Q 033269 101 FIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 101 f~~~L~~~~~~~~lpV~l~D 120 (123)
.++.+++.| +-||.++.
T Consensus 75 I~~~v~~~~---~~~v~i~~ 91 (334)
T 3cet_A 75 ILNAAESAF---GSNISVFD 91 (334)
T ss_dssp HHHHHHHHH---TTCEEEEC
T ss_pred HHHHHHHhc---CCceEEEe
Confidence 677777777 45776653
No 86
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=50.51 E-value=16 Score=30.23 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=22.5
Q ss_pred CceEEEEecCCCeEEEEEeeCCCcee
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGNEV 59 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~~a 59 (123)
...+||||.|+.-+=.++.|..+.+.
T Consensus 3 kkYvlgID~GTss~Ka~l~d~~G~~v 28 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDHDANII 28 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEE
T ss_pred ceEEEEEEccccceeeeEEcCCCCEE
Confidence 46789999999999999999988643
No 87
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=48.77 E-value=44 Score=25.80 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=42.5
Q ss_pred ceEEEEecCCCeEEEEEee-CCCceeecceeeeCccccc--chHHHHhhcCcCeEEEeccCC-ChH-HHHHHHHHHhhcc
Q 033269 35 LGILGLDVGNKYIGVSLFK-RHGNEVEPLTKFDRAKADQ--ELPQLIEKHKVLGMVVNMPKE-HHE-HVSSFIEQLDGNE 109 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD-~~~~~a~Pl~~i~~~~~~~--~L~~li~~~~i~~iVVGlP~~-dGt-~v~~f~~~L~~~~ 109 (123)
+.+|.||+|..++=+|+.| ....+.. ..+. ++..+ .+.. +...+++.+++. + .+. ....+.+.+++.+
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~~~~~--~r~~-t~de~~~~l~~-~~~~~i~~viis---SV~vp~~~~~l~~~~~~~~ 95 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAARSVAG--GLAE-SDDALVEQLTS-QQALPVRACRLV---SVRSEQETSQLVARLEQLF 95 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEE--EEES-SHHHHHHHHHH-TTTSCEEEEEEE---ECSCHHHHHHHHHHHHHHS
T ss_pred CcEEEEEeCCCeeEEEEEeCCCEEEEE--EEec-CHHHHHHHHhc-CcccCCCEEEEE---ECCchHHHHHHHHHHHHHc
Confidence 4689999999999999998 3333322 2232 11112 2221 234568888887 2 222 3345555566655
Q ss_pred cCCCCCEEEe
Q 033269 110 IYRGLPFCYF 119 (123)
Q Consensus 110 ~~~~lpV~l~ 119 (123)
++++.++
T Consensus 96 ---~~~p~~v 102 (271)
T 2f9w_A 96 ---PVSALVA 102 (271)
T ss_dssp ---SCCCEEC
T ss_pred ---CCCeEEE
Confidence 5555554
No 88
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=48.24 E-value=44 Score=30.30 Aligned_cols=53 Identities=19% Similarity=0.385 Sum_probs=40.5
Q ss_pred ceEEEEec----CCCeEEEEEeeCCCceeecceeeeCccccc-chHHHHhhcCcCeEEEe
Q 033269 35 LGILGLDV----GNKYIGVSLFKRHGNEVEPLTKFDRAKADQ-ELPQLIEKHKVLGMVVN 89 (123)
Q Consensus 35 ~riLglD~----G~kriGlAvsD~~~~~a~Pl~~i~~~~~~~-~L~~li~~~~i~~iVVG 89 (123)
..++||-. +.+++|+|..|....... +.-+. ++..+ .|...+...++..|++.
T Consensus 145 ~~l~AIk~~~~~~~~~~Gla~~D~stge~~-~~~~~-d~~~~~~l~~~l~~~~P~Eil~~ 202 (934)
T 3thx_A 145 IGVVGVKMSAVDGQRQVGVGYVDSIQRKLG-LCEFP-DNDQFSNLEALLIQIGPKECVLP 202 (934)
T ss_dssp CCEEEEEECCSSSSCEEEEEEEETTTTEEE-EEEEE-CCTTCHHHHHHHHHHCCSEEEEE
T ss_pred ceEEEEEEeecCCCcEEEEEEEECCCCeEE-EEecC-CchHHHHHHHHHHhCCCeEEEee
Confidence 57788876 678999999998876443 34444 33446 89999999999999996
No 89
>3vdp_A Recombination protein RECR; zinc finger, DNA repair, DNA binding; 2.45A {Thermoanaerobacter tengcongensis} PDB: 3vdu_A 3ve5_D
Probab=47.75 E-value=26 Score=26.68 Aligned_cols=52 Identities=13% Similarity=0.184 Sum_probs=33.8
Q ss_pred eeecceeeeCccccc-chHHHHhhcCcCeEEEeccCC-ChHHHHHHHHHHhhcc
Q 033269 58 EVEPLTKFDRAKADQ-ELPQLIEKHKVLGMVVNMPKE-HHEHVSSFIEQLDGNE 109 (123)
Q Consensus 58 ~a~Pl~~i~~~~~~~-~L~~li~~~~i~~iVVGlP~~-dGt~v~~f~~~L~~~~ 109 (123)
..+|+.-+-..+-.+ .|.+.+.+.+|..+|+.+.-+ .|+..-.|..++-+.+
T Consensus 124 ~iSPldGigP~~L~i~~L~~Ri~~~~v~EVIlAtnpTvEGeaTa~Yi~~~Lk~~ 177 (212)
T 3vdp_A 124 VISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPF 177 (212)
T ss_dssp CCBTTTTBCGGGTTHHHHHHHHHHSCCSEEEECCCSSHHHHHHHHHHHHHHTTT
T ss_pred ccCccCCCCccccCHHHHHHHHhcCCCcEEEEECCCCccHHHHHHHHHHHhhhc
Confidence 344555443121235 888888889999999999888 9985555554444434
No 90
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=46.17 E-value=29 Score=22.37 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=21.6
Q ss_pred CcCeEEEeccCC-ChH--H--HHHHHHHHhhcccCCCCCEE
Q 033269 82 KVLGMVVNMPKE-HHE--H--VSSFIEQLDGNEIYRGLPFC 117 (123)
Q Consensus 82 ~i~~iVVGlP~~-dGt--~--v~~f~~~L~~~~~~~~lpV~ 117 (123)
+.+.+|+|-|.. .|- . ++.|.+++...+. +.++.
T Consensus 46 ~~d~vi~g~p~y~~~~~~~~~~~~fl~~l~~~l~--~k~~~ 84 (137)
T 2fz5_A 46 SKDVILLGCPAMGSEELEDSVVEPFFTDLAPKLK--GKKVG 84 (137)
T ss_dssp TCSEEEEECCCBTTTBCCHHHHHHHHHHHGGGCS--SCEEE
T ss_pred cCCEEEEEccccCCCCCCHHHHHHHHHHhhhhcC--CCEEE
Confidence 457888888877 443 4 7788887754433 44443
No 91
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=45.05 E-value=43 Score=25.20 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=32.9
Q ss_pred chHHHHhhcCcCeEEEeccCC----ChHH-----------------HHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE----HHEH-----------------VSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~----dGt~-----------------v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
++.+.+.+.++|.|-+|.|++ ||.. +-..++.+++..+ ++|+.+.
T Consensus 35 ~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pi~~m 100 (262)
T 2ekc_A 35 KAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP--DIPFLLM 100 (262)
T ss_dssp HHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT--TSCEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC--CCCEEEE
Confidence 677777889999999999996 4542 2245777776664 6788763
No 92
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=44.61 E-value=52 Score=20.39 Aligned_cols=42 Identities=12% Similarity=0.043 Sum_probs=30.2
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++..+ ++||.++
T Consensus 37 ~a~~~~~~~~~dlii~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~~ 80 (134)
T 3f6c_A 37 SAVQRVETLKPDIVIIDVDIPGVNG---IQVLETLRKRQY--SGIIIIV 80 (134)
T ss_dssp THHHHHHHHCCSEEEEETTCSSSCH---HHHHHHHHHTTC--CSEEEEE
T ss_pred HHHHHHHhcCCCEEEEecCCCCCCh---HHHHHHHHhcCC--CCeEEEE
Confidence 556667778999999998776 55 456666666665 6787765
No 93
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=42.61 E-value=17 Score=23.47 Aligned_cols=44 Identities=5% Similarity=-0.050 Sum_probs=28.4
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChH-HHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHE-HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt-~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.|.+..++++++.||+|-..+ -.. ..-..++.+-... +.||..+
T Consensus 97 ~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~---~~pVlvv 142 (143)
T 3fdx_A 97 KILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHA---ECSVLVV 142 (143)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHC---SSEEEEE
T ss_pred HHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhC---CCCEEEe
Confidence 888999999999999997532 111 2233445554444 5777654
No 94
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=42.10 E-value=43 Score=26.50 Aligned_cols=44 Identities=11% Similarity=0.344 Sum_probs=35.3
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEE-ec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCY-FQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l-~D 120 (123)
++.+-+.+...+.|+|| -.+ . .+.+....+.+++.+ ++||++ +.
T Consensus 57 ~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~---~lPvil~fP 104 (286)
T 3vk5_A 57 EKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAAT---PLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHC---SSCEEEECC
T ss_pred HHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhC---CCCEEEECC
Confidence 35555667899999999 555 6 668999999999877 899998 53
No 95
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=41.21 E-value=23 Score=22.75 Aligned_cols=44 Identities=11% Similarity=0.025 Sum_probs=29.2
Q ss_pred chHHHHhhcCcCeEEEeccCCC--hH-HHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEH--HE-HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~d--Gt-~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.|.+.+++++++.||+|-.-.+ +. ..-..++++-... +.||..+
T Consensus 90 ~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~---~~pVlvv 136 (137)
T 2z08_A 90 AILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA---PCPVLLV 136 (137)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC---SSCEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC---CCCEEEe
Confidence 8889999999999999965321 11 2234455555544 6788765
No 96
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=40.29 E-value=32 Score=22.96 Aligned_cols=46 Identities=11% Similarity=0.130 Sum_probs=30.6
Q ss_pred chHHHHhhcCcCeEEEeccCCChH---HHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHE---HVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt---~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.|.+.+++++++.||+|-.-..+- ..-..++.+-... +.||..+-.
T Consensus 108 ~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~---~~PVlvv~~ 156 (170)
T 2dum_A 108 EIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKT---KKPVLIIKE 156 (170)
T ss_dssp HHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHC---SSCEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhC---CCCEEEEcc
Confidence 888889999999999996533111 2223455555555 688887754
No 97
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=40.02 E-value=30 Score=28.37 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=20.9
Q ss_pred eEEEEecCCCeEEEEEeeCCCce
Q 033269 36 GILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 36 riLglD~G~kriGlAvsD~~~~~ 58 (123)
.+||||+|+..+=.++.|..+.+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~i 25 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGEI 25 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSCE
T ss_pred EEEEEecCCcceEEEEECCCCCE
Confidence 58999999999999999988864
No 98
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=39.63 E-value=42 Score=25.61 Aligned_cols=35 Identities=11% Similarity=0.280 Sum_probs=24.2
Q ss_pred HHhhcCcCeEEEeccCC-ChH----HHHHHHHHHhhcccCCCCCEEE
Q 033269 77 LIEKHKVLGMVVNMPKE-HHE----HVSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 77 li~~~~i~~iVVGlP~~-dGt----~v~~f~~~L~~~~~~~~lpV~l 118 (123)
.+++.+++++|+| -++ ||+ ..+++.+.-. +++++|
T Consensus 84 ~~~~~GadGvV~G-~Lt~dg~iD~~~~~~Li~~a~------~~~vTF 123 (224)
T 2bdq_A 84 RAVELESDALVLG-ILTSNNHIDTEAIEQLLPATQ------GLPLVF 123 (224)
T ss_dssp HHHHTTCSEEEEC-CBCTTSSBCHHHHHHHHHHHT------TCCEEE
T ss_pred HHHHcCCCEEEEe-eECCCCCcCHHHHHHHHHHhC------CCeEEE
Confidence 4567899999999 466 888 5555553322 678876
No 99
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.84 E-value=61 Score=19.99 Aligned_cols=42 Identities=10% Similarity=0.128 Sum_probs=27.9
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++..+ ++||+++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~~ 85 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNG---LKLLEHIRNRGD--QTPVLVI 85 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----C---HHHHHHHHHTTC--CCCEEEE
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCH---HHHHHHHHhcCC--CCCEEEE
Confidence 566667788899999997665 55 455566666555 7788765
No 100
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=38.81 E-value=89 Score=25.12 Aligned_cols=58 Identities=14% Similarity=0.318 Sum_probs=34.6
Q ss_pred ceEEEEecCCCeEEEEEeeCCC--ceeecceeeeCcc------cc----c-chHHHHhh------cCcCe-EEEeccC
Q 033269 35 LGILGLDVGNKYIGVSLFKRHG--NEVEPLTKFDRAK------AD----Q-ELPQLIEK------HKVLG-MVVNMPK 92 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~--~~a~Pl~~i~~~~------~~----~-~L~~li~~------~~i~~-iVVGlP~ 92 (123)
.-++|||+|+.+|=+.+..... .-.......+... .+ . .+++.+++ .++.. +++|.|=
T Consensus 8 ~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~g 85 (419)
T 4a2a_A 8 VFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSS 85 (419)
T ss_dssp CEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEECC
T ss_pred CEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEcC
Confidence 4689999999999888876432 1122223333111 12 2 66666654 46788 9998754
No 101
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=38.59 E-value=11 Score=33.98 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=21.1
Q ss_pred CceEEEEecCCCeEEEEEeeCCCc
Q 033269 34 GLGILGLDVGNKYIGVSLFKRHGN 57 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~~~ 57 (123)
.+++||||+|..++=+++.|..+.
T Consensus 77 ~G~~laiDlGGTnirv~lv~~~G~ 100 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQVNHE 100 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEEEecCC
Confidence 588999999999999999987654
No 102
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=37.82 E-value=96 Score=23.20 Aligned_cols=94 Identities=11% Similarity=0.136 Sum_probs=56.8
Q ss_pred hhhhHHhhhhhhhhhccCCCCceEEEEecCC--CeEEEEEeeCCCc--eee-cceeeeCccccc--chHHHHhhcCcCeE
Q 033269 14 PSHLFKFCGRVEKQCVGENAGLGILGLDVGN--KYIGVSLFKRHGN--EVE-PLTKFDRAKADQ--ELPQLIEKHKVLGM 86 (123)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~riLglD~G~--kriGlAvsD~~~~--~a~-Pl~~i~~~~~~~--~L~~li~~~~i~~i 86 (123)
|..+..|+..+++.+. +..|+.| |.+. +||++. .-.+. +.. +..++- + .++ .-.....+.++..|
T Consensus 135 ~~t~~~l~~~vk~~l~---~~vr~~g-~~~~~i~~VAv~--~GsG~~~~~~agaD~~i-T-Gd~~~h~~~~A~e~gi~~i 206 (242)
T 2yyb_A 135 PTPLLQVADRLGQLTG---MQPLVHQ-GGLDHVETVILV--SGSGTGLLPKVDADLFV-T-GEPKHSVFHETFERGLNVI 206 (242)
T ss_dssp CSCBSTHHHHHHHTTS---SCCEEEE-SSCSBCCCEEEE--CSSCGGGGGGCCSSEEE-E-SCCCGGGHHHHHHTTCEEE
T ss_pred CcCHHHHHHHHHHHcc---cCeEEec-CCCCceeEEEEE--cCCCHHHHHHcCCCEEE-E-ecCCHHHHHHHHHCCCeEE
Confidence 5667788888887775 3467766 6664 555554 33332 111 223332 1 222 22233345678888
Q ss_pred EEeccCCChH---HHHHHHHHHhhcccCCCCCEEEecC
Q 033269 87 VVNMPKEHHE---HVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 87 VVGlP~~dGt---~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+| +..| .++.+++.|++++ +++|.+.|.
T Consensus 207 ~~G---H~~tE~~~~~~l~~~L~~~~---~~~v~~~~~ 238 (242)
T 2yyb_A 207 YAG---HYDTETFGVKALAAHLEARF---GLPWVFLDH 238 (242)
T ss_dssp ECC---HHHHTTHHHHHHHHHHHHHH---CCCEEECCC
T ss_pred ECC---cHHHHHHHHHHHHHHHHhhc---CceEEEecC
Confidence 888 2123 7889999999888 899998876
No 103
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=37.41 E-value=30 Score=21.36 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=13.3
Q ss_pred EEEEecCCCeEEEEEe
Q 033269 37 ILGLDVGNKYIGVSLF 52 (123)
Q Consensus 37 iLglD~G~kriGlAvs 52 (123)
..-+|.+.+|||+|-+
T Consensus 71 y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 71 HTVFDYGNLLVGFAEA 86 (87)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCEEEEEEc
Confidence 4569999999999954
No 104
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=37.00 E-value=62 Score=20.16 Aligned_cols=42 Identities=7% Similarity=0.044 Sum_probs=30.1
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+++.+++.+++.+-+. +| ..+.+.|.+..+ ++||+++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~~ 85 (137)
T 3hdg_A 42 EGERLFGLHAPDVIITDIRMPKLGG---LEMLDRIKAGGA--KPYVIVI 85 (137)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCH---HHHHHHHHHTTC--CCEEEEC
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCH---HHHHHHHHhcCC--CCcEEEE
Confidence 566667788999999997665 55 456666766655 6787765
No 105
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=36.88 E-value=72 Score=19.52 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=30.0
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhc--ccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGN--EIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~--~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++. .+ ++||+++
T Consensus 38 ~a~~~l~~~~~dlii~D~~l~~~~g---~~~~~~l~~~~~~~--~~~ii~~ 83 (127)
T 3i42_A 38 DALHAMSTRGYDAVFIDLNLPDTSG---LALVKQLRALPMEK--TSKFVAV 83 (127)
T ss_dssp HHHHHHHHSCCSEEEEESBCSSSBH---HHHHHHHHHSCCSS--CCEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCH---HHHHHHHHhhhccC--CCCEEEE
Confidence 566677788999999997665 55 4566667665 33 6787765
No 106
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=36.59 E-value=18 Score=30.30 Aligned_cols=29 Identities=21% Similarity=0.231 Sum_probs=23.1
Q ss_pred ccCCCCceEEEEecCCCeEEEEEeeCCCc
Q 033269 29 VGENAGLGILGLDVGNKYIGVSLFKRHGN 57 (123)
Q Consensus 29 ~~~~~~~riLglD~G~kriGlAvsD~~~~ 57 (123)
+.....++.||||.|...+=+++.+..+.
T Consensus 53 P~G~E~G~~LAlDlGGTn~RV~~V~l~g~ 81 (445)
T 3hm8_A 53 PDGSERGDFLALDLGGTNFRVLLVRVTTG 81 (445)
T ss_dssp CCSCCCEEEEEEEESSSSEEEEEEEESSS
T ss_pred CCCceeeEEEEEEecCCeEEEEEEEECCc
Confidence 33444689999999999999999887654
No 107
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=35.98 E-value=47 Score=22.29 Aligned_cols=45 Identities=11% Similarity=-0.033 Sum_probs=29.7
Q ss_pred chHHHHhhcCcCeEEEeccCCChH---HHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHE---HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt---~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.|.+.+++++++.||+|-.-.++- ..-..++.+-... +.||..+-
T Consensus 115 ~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a---~~pVlvv~ 162 (175)
T 2gm3_A 115 VICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHA---ECPVMTIK 162 (175)
T ss_dssp HHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCC---CCCEEEEc
Confidence 888889999999999996432221 3334556666555 68888764
No 108
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=35.68 E-value=65 Score=20.61 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=30.4
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +| ..+++.|.+..+ ++||+++
T Consensus 57 ~al~~l~~~~~dlii~D~~l~~~~g---~~~~~~l~~~~~--~~~ii~l 100 (150)
T 4e7p_A 57 EAIQLLEKESVDIAILDVEMPVKTG---LEVLEWIRSEKL--ETKVVVV 100 (150)
T ss_dssp HHHHHHTTSCCSEEEECSSCSSSCH---HHHHHHHHHTTC--SCEEEEE
T ss_pred HHHHHhhccCCCEEEEeCCCCCCcH---HHHHHHHHHhCC--CCeEEEE
Confidence 666677788999999997665 55 456666666655 7787765
No 109
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=35.47 E-value=36 Score=27.63 Aligned_cols=22 Identities=27% Similarity=0.588 Sum_probs=19.8
Q ss_pred EEEEecCCCeEEEEEeeCCCce
Q 033269 37 ILGLDVGNKYIGVSLFKRHGNE 58 (123)
Q Consensus 37 iLglD~G~kriGlAvsD~~~~~ 58 (123)
++|||+|+..+=.++.|..+.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~~ 23 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEV 23 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSCE
T ss_pred EEEEEecCcccEEEEECCCCCE
Confidence 6999999999999999988864
No 110
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.43 E-value=73 Score=20.44 Aligned_cols=43 Identities=7% Similarity=0.043 Sum_probs=30.3
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
+..+.+.+..++.+++.+-+. +| ..+.+.|++..+ ++||+++-
T Consensus 49 ~a~~~l~~~~~dlvi~D~~l~~~~g---~~~~~~l~~~~~--~~~ii~~s 93 (153)
T 3hv2_A 49 QALQLLASREVDLVISAAHLPQMDG---PTLLARIHQQYP--STTRILLT 93 (153)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCH---HHHHHHHHHHCT--TSEEEEEC
T ss_pred HHHHHHHcCCCCEEEEeCCCCcCcH---HHHHHHHHhHCC--CCeEEEEE
Confidence 566677788999999997665 55 345556665555 77887653
No 111
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=35.28 E-value=26 Score=22.56 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=27.8
Q ss_pred chHHHHhhcCcCeEEEeccCCCh--H-HHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHH--E-HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dG--t-~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.|.+.+++++++.||+|-.-.++ . ..-..++.+-... +.||..+
T Consensus 101 ~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~---~~pVlvV 147 (147)
T 3hgm_A 101 TIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSA---HCPVLVV 147 (147)
T ss_dssp HHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHC---SSCEEEC
T ss_pred HHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhC---CCCEEEC
Confidence 88889999999999999643211 1 1223344554444 5777653
No 112
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=34.59 E-value=19 Score=32.40 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=21.1
Q ss_pred CCCCceEEEEecCCCeEEEEEeeCC
Q 033269 31 ENAGLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 31 ~~~~~riLglD~G~kriGlAvsD~~ 55 (123)
.+..+++||||.|...+=+++.+..
T Consensus 522 G~E~G~~lalDlGGTn~Rv~~V~l~ 546 (917)
T 1cza_N 522 GTENGDFLALDLGGTNFRVLLVKIR 546 (917)
T ss_dssp SCCCEEEEEEEESSSSEEEEEEEEE
T ss_pred CCcceEEEEEEECCCcEEEEEEEeC
Confidence 3446899999999999999998874
No 113
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=34.46 E-value=67 Score=20.58 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=29.5
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +| ..+.+.|.+..+ .+||+++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~l 85 (154)
T 2rjn_A 42 DALEALKGTSVQLVISDMRMPEMGG---EVFLEQVAKSYP--DIERVVI 85 (154)
T ss_dssp HHHHHHTTSCCSEEEEESSCSSSCH---HHHHHHHHHHCT--TSEEEEE
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCH---HHHHHHHHHhCC--CCcEEEE
Confidence 556666778899999998766 55 355666666555 6787765
No 114
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=34.42 E-value=80 Score=20.15 Aligned_cols=42 Identities=10% Similarity=0.050 Sum_probs=30.3
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|.+..+ ++||+++
T Consensus 52 ~a~~~l~~~~~dlii~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~~ 95 (152)
T 3eul_A 52 AALELIKAHLPDVALLDYRMPGMDG---AQVAAAVRSYEL--PTRVLLI 95 (152)
T ss_dssp HHHHHHHHHCCSEEEEETTCSSSCH---HHHHHHHHHTTC--SCEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCH---HHHHHHHHhcCC--CCeEEEE
Confidence 666777788999999997665 55 456666666555 6787765
No 115
>2e6m_A Werner syndrome ATP-dependent helicase homolog; APO form, hydrolase; 2.00A {Mus musculus} PDB: 2e6l_A 2fby_A 2fbv_A 2fbx_A 2fbt_A 2fc0_A*
Probab=34.07 E-value=1.2e+02 Score=21.33 Aligned_cols=69 Identities=12% Similarity=0.124 Sum_probs=37.4
Q ss_pred hhhhHHhhhhhhhhhccCCCCceEEEEec----------CCCeEEEEEeeCCCc-eeecceeeeCccccc-chHHHHhhc
Q 033269 14 PSHLFKFCGRVEKQCVGENAGLGILGLDV----------GNKYIGVSLFKRHGN-EVEPLTKFDRAKADQ-ELPQLIEKH 81 (123)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~riLglD~----------G~kriGlAvsD~~~~-~a~Pl~~i~~~~~~~-~L~~li~~~ 81 (123)
|+++.++|..+.+.+.. ..++|+|. ..+-+|+.++...+. ...|+..+ .... .|..++++.
T Consensus 23 ~~~~~~~~~~~~~~l~~----~~~v~~D~E~~~~~~~~~~~~~~~iqla~~~~~~~~i~~~~~---~~~~~~L~~lL~d~ 95 (208)
T 2e6m_A 23 ASDCSFLSEDISMRLSD----GDVVGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISSM---SVFPQGLKMLLENK 95 (208)
T ss_dssp HHHHHHHHHHHHHHCCT----TCEEEEEEECCC---CCSCCCCCEEEEECSSSEEEEECGGGC---SSCCHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHhcc----CCEEEEEeecCCCCCCCCCCCeEEEEEecCCCeEEEEECccc---ccchHHHHHHhcCC
Confidence 56666666554444433 25799986 245678777754332 22221111 1233 788888766
Q ss_pred CcCeEEEe
Q 033269 82 KVLGMVVN 89 (123)
Q Consensus 82 ~i~~iVVG 89 (123)
++..+..|
T Consensus 96 ~i~Kv~~~ 103 (208)
T 2e6m_A 96 SIKKAGVG 103 (208)
T ss_dssp TSEEEESS
T ss_pred CceEEEEe
Confidence 65555444
No 116
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=33.95 E-value=84 Score=19.64 Aligned_cols=43 Identities=12% Similarity=0.118 Sum_probs=30.0
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+ ..+. ....+.+.|.+..+ ++||+++
T Consensus 39 ~a~~~l~~~~~dlvi~d~-~~~~-~g~~~~~~l~~~~~--~~pii~l 81 (142)
T 2qxy_A 39 EAFTFLRREKIDLVFVDV-FEGE-ESLNLIRRIREEFP--DTKVAVL 81 (142)
T ss_dssp HHHHHHTTSCCSEEEEEC-TTTH-HHHHHHHHHHHHCT--TCEEEEE
T ss_pred HHHHHHhccCCCEEEEeC-CCCC-cHHHHHHHHHHHCC--CCCEEEE
Confidence 556667778999999998 6532 23466777776665 6888765
No 117
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=33.82 E-value=45 Score=25.93 Aligned_cols=35 Identities=9% Similarity=0.213 Sum_probs=24.0
Q ss_pred HHhhcCcCeEEEeccCC-ChH----HHHHHHHHHhhcccCCCCCEEE
Q 033269 77 LIEKHKVLGMVVNMPKE-HHE----HVSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 77 li~~~~i~~iVVGlP~~-dGt----~v~~f~~~L~~~~~~~~lpV~l 118 (123)
.+.+.+++++|+| -++ ||+ ..+++.+.-. +++++|
T Consensus 81 ~~~~~GadGvV~G-~Lt~dg~iD~~~~~~Li~~a~------~~~vTF 120 (256)
T 1twd_A 81 TVRELGFPGLVTG-VLDVDGNVDMPRMEKIMAAAG------PLAVTF 120 (256)
T ss_dssp HHHHTTCSEEEEC-CBCTTSSBCHHHHHHHHHHHT------TSEEEE
T ss_pred HHHHcCCCEEEEe-eECCCCCcCHHHHHHHHHHhC------CCcEEE
Confidence 4567899999999 466 888 5555553322 567776
No 118
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=33.65 E-value=17 Score=23.43 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=27.0
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.|.+.+++++++.||+|- .|. ..++.+-... +.||..+
T Consensus 100 ~I~~~a~~~~~dliV~G~---~g~---sv~~~vl~~a---~~PVlvv 137 (138)
T 1q77_A 100 EVKKFVEGKGYELVVWAC---YPS---AYLCKVIDGL---NLASLIV 137 (138)
T ss_dssp HHHHHHTTSCCSEEEECS---CCG---GGTHHHHHHS---SSEEEEC
T ss_pred HHHHHHHhcCCCEEEEeC---CCC---chHHHHHHhC---CCceEee
Confidence 888889999999999993 232 5555555554 5677654
No 119
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=33.27 E-value=71 Score=23.97 Aligned_cols=44 Identities=5% Similarity=0.141 Sum_probs=32.4
Q ss_pred chHHHHhhcCcCeEEEeccCC----ChHHHH-----------------HHHHHHhhcccCCCCCEEE
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE----HHEHVS-----------------SFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~----dGt~v~-----------------~f~~~L~~~~~~~~lpV~l 118 (123)
++.+.+.+.+++.|-+|.|++ ||..+. ..++.+++.+. ++||.+
T Consensus 35 ~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pv~l 99 (268)
T 1qop_A 35 KIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP--TIPIGL 99 (268)
T ss_dssp HHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS--SSCEEE
T ss_pred HHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC--CCCEEE
Confidence 666666778999999999996 565332 56778877633 789876
No 120
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=33.11 E-value=51 Score=24.34 Aligned_cols=33 Identities=6% Similarity=-0.054 Sum_probs=27.8
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcc
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNE 109 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~ 109 (123)
.|.+++++++++.|++| ..+.-++++-+|+.++
T Consensus 82 ~l~~~i~~~~p~~Vl~g----~t~~G~~laprlAa~L 114 (217)
T 3ih5_A 82 ILVNLFKEEQPQICLMG----ATVIGRDLGPRVSSAL 114 (217)
T ss_dssp HHHHHHHHHCCSEEEEE----CSHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEe----CCcchhhHHHHHHHHh
Confidence 78899999999999999 5555678888888777
No 121
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=33.00 E-value=70 Score=24.68 Aligned_cols=45 Identities=13% Similarity=0.285 Sum_probs=37.0
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++++--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 101 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 148 (304)
T 3l21_A 101 RLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT---ELPMLLYD 148 (304)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 788888899999999999986 3 337777888888877 79998875
No 122
>3obw_A Protein pelota homolog; SM fold, hydrolase; 2.60A {Sulfolobus solfataricus}
Probab=32.95 E-value=74 Score=25.57 Aligned_cols=85 Identities=11% Similarity=0.076 Sum_probs=44.7
Q ss_pred hhhhhhhhccCCCCceEEEEecCCCeEEEEEeeCCCceeecceeeeCcc----cc-----c-chHHHHhhcCcCeEEEec
Q 033269 21 CGRVEKQCVGENAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAK----AD-----Q-ELPQLIEKHKVLGMVVNM 90 (123)
Q Consensus 21 ~~~~~~~~~~~~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~----~~-----~-~L~~li~~~~i~~iVVGl 90 (123)
.+.+++.|. ..+..-++.+|-|...+|+--......+..=-..+|++. .. . .+.+.++..+++++||+-
T Consensus 135 le~L~e~~~-~~~~~~~vv~d~g~A~i~~l~~~~~~~~~~i~~~iPkK~~~~~~~f~~~V~e~~~~~~~~~~v~~iIlaG 213 (364)
T 3obw_A 135 LDRLKRQAN-KRSRIIIALVDFDEYLIAIPFEQGIKILSEKSLRPLNEEEGIIEQNALEIATELAEYVKQYDPDAILLAG 213 (364)
T ss_dssp -----------CCCEEEEEEETTEEEEEEECSSCEECCCEEECGGGCSSTTHHHHHHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHhC-cCCCEEEEEEECCcEEEEEEeCCEEEEEEEEEeeCccchhHHHHHHHHHHHHHHHHHhccccCCEEEEEC
Confidence 345555343 444566789999999998876543322221111223221 11 2 455556667899999995
Q ss_pred cCCChHHHHHHHHHHhhcc
Q 033269 91 PKEHHEHVSSFIEQLDGNE 109 (123)
Q Consensus 91 P~~dGt~v~~f~~~L~~~~ 109 (123)
| |-.-..|.+.|..+.
T Consensus 214 P---g~~K~~f~~~l~~~~ 229 (364)
T 3obw_A 214 P---GFFKEEVSKKVNAIL 229 (364)
T ss_dssp S---SSHHHHHHHHHHTTT
T ss_pred C---hHHHHHHHHHHHHHh
Confidence 4 336667777777655
No 123
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=32.63 E-value=40 Score=22.18 Aligned_cols=46 Identities=15% Similarity=0.205 Sum_probs=30.2
Q ss_pred chHHHHhhcCcCeEEEeccCCCh--H-HHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHH--E-HVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dG--t-~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.|.+.+++++++.||+|-.-..+ . ..-..++++-... ++||..+..
T Consensus 111 ~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~---~~pVlvv~~ 159 (162)
T 1mjh_A 111 EIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS---NKPVLVVKR 159 (162)
T ss_dssp HHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC---CSCEEEECC
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC---CCCEEEEeC
Confidence 88889999999999999642211 1 2223445555444 688887753
No 124
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.45 E-value=92 Score=19.39 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=30.2
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhh--cccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDG--NEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~--~~~~~~lpV~l~D 120 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++ ..+ ++||+++-
T Consensus 41 ~a~~~l~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~~~--~~~ii~~s 87 (140)
T 3grc_A 41 QALEQVARRPYAAMTVDLNLPDQDG---VSLIRALRRDSRTR--DLAIVVVS 87 (140)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCH---HHHHHHHHTSGGGT--TCEEEEEC
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCH---HHHHHHHHhCcccC--CCCEEEEe
Confidence 566677888999999997665 55 456666665 344 78887653
No 125
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=32.29 E-value=99 Score=19.70 Aligned_cols=42 Identities=10% Similarity=-0.006 Sum_probs=29.8
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+|+.+-+. +| ..+.+.|.+..+ .+||+++
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g---~~~~~~l~~~~~--~~~ii~l 85 (153)
T 3cz5_A 42 EAYRLYRETTPDIVVMDLTLPGPGG---IEATRHIRQWDG--AARILIF 85 (153)
T ss_dssp HHHHHHHTTCCSEEEECSCCSSSCH---HHHHHHHHHHCT--TCCEEEE
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCH---HHHHHHHHHhCC--CCeEEEE
Confidence 556667778899999997665 55 356666666555 6788765
No 126
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.16 E-value=90 Score=19.42 Aligned_cols=42 Identities=7% Similarity=0.156 Sum_probs=29.3
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +|- ++.+.|++..+ ++||.++
T Consensus 40 ~al~~~~~~~~dlvilD~~lp~~~g~---~~~~~l~~~~~--~~~ii~l 83 (133)
T 3b2n_A 40 DAMKLIEEYNPNVVILDIEMPGMTGL---EVLAEIRKKHL--NIKVIIV 83 (133)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHH---HHHHHHHHTTC--SCEEEEE
T ss_pred HHHHHHhhcCCCEEEEecCCCCCCHH---HHHHHHHHHCC--CCcEEEE
Confidence 555566778899999987665 663 55666666555 7888765
No 127
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=32.05 E-value=45 Score=22.50 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=30.6
Q ss_pred chHHHHhhcCcCeEEEeccCCChH---HHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHE---HVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt---~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.|.+.+++++++.||||-.-.++- ..-..++++-... .+||..+..
T Consensus 110 ~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a---~~PVlvV~~ 158 (163)
T 1tq8_A 110 ALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRA---KVDVLIVHT 158 (163)
T ss_dssp HHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHT---TCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhC---CCCEEEEeC
Confidence 888889999999999995322221 1223355665555 688888754
No 128
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=31.98 E-value=1e+02 Score=23.27 Aligned_cols=38 Identities=5% Similarity=0.079 Sum_probs=31.1
Q ss_pred HhhcCcCeEEEeccCC-ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 78 IEKHKVLGMVVNMPKE-HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 78 i~~~~i~~iVVGlP~~-dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+.+.+.|.|.||--.. ..+.+.+..+++++ + ++|++++
T Consensus 27 ~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~-~---~~Pvvlf 65 (228)
T 3vzx_A 27 LCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-F---LVPCVLE 65 (228)
T ss_dssp HHTSSCSEEEECCCSCCCHHHHHHHHHHHTT-S---SSCEEEE
T ss_pred HHHcCCCEEEECCcCCCCHHHHHHHHHHhhc-c---CCCEEEe
Confidence 4678899999997555 55589999999987 6 8999886
No 129
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=31.03 E-value=69 Score=24.48 Aligned_cols=45 Identities=9% Similarity=0.144 Sum_probs=36.5
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 88 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~---~lPiilYn 135 (292)
T 3daq_A 88 QASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV---KLPVVLYN 135 (292)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH---CSCEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 778888889999999999986 3 336777788888877 79998875
No 130
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=30.85 E-value=86 Score=24.11 Aligned_cols=45 Identities=13% Similarity=0.235 Sum_probs=36.4
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 98 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 145 (301)
T 1xky_A 98 DLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST---PLPVMLYN 145 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888899999999999987 3 236777778888877 79998865
No 131
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=30.81 E-value=41 Score=27.80 Aligned_cols=37 Identities=16% Similarity=0.307 Sum_probs=21.6
Q ss_pred hhhhhhhhccCCCCceEEEEecCCCeEEEEEeeCCCc
Q 033269 21 CGRVEKQCVGENAGLGILGLDVGNKYIGVSLFKRHGN 57 (123)
Q Consensus 21 ~~~~~~~~~~~~~~~riLglD~G~kriGlAvsD~~~~ 57 (123)
.|..|.|-++...|++||.|..|+.-+=.|+-|....
T Consensus 9 ~~~~~~~~~~~~~m~~ILviN~GSSS~K~~l~~~~~~ 45 (398)
T 4ijn_A 9 MGTLEAQTQGPGSMVTVLVVNSGSSSLKYAVVRPASG 45 (398)
T ss_dssp -------------CCEEEEEEECSSCEEEEEECTTTC
T ss_pred ccchhhhcccccccccEEEEeCCchhheEEEEECCCC
Confidence 3667889999999999999999999999999986554
No 132
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=30.72 E-value=82 Score=24.13 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=36.5
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . ...+.+|.+.+.+.. ++||.+.|
T Consensus 93 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~---~lPiilYn 140 (297)
T 3flu_A 93 ALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT---SIPMIIYN 140 (297)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEE
Confidence 778888899999999999986 3 336777778888877 79998875
No 133
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=30.57 E-value=41 Score=24.32 Aligned_cols=40 Identities=13% Similarity=0.331 Sum_probs=27.0
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+.+++...++++||+- |.. +. ...+.+.+. ++|++++|.
T Consensus 57 ~~~~~l~~~~vdgiIi~-~~~~~~----~~~~~l~~~----~iPvV~i~~ 97 (288)
T 3gv0_A 57 PIRYILETGSADGVIIS-KIEPND----PRVRFMTER----NMPFVTHGR 97 (288)
T ss_dssp HHHHHHHHTCCSEEEEE-SCCTTC----HHHHHHHHT----TCCEEEESC
T ss_pred HHHHHHHcCCccEEEEe-cCCCCc----HHHHHHhhC----CCCEEEECC
Confidence 56667778899999986 433 32 234455442 789999875
No 134
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=30.52 E-value=26 Score=29.45 Aligned_cols=28 Identities=25% Similarity=0.200 Sum_probs=21.3
Q ss_pred ccCCCCceEEEEecCCCeEEEEEeeCCC
Q 033269 29 VGENAGLGILGLDVGNKYIGVSLFKRHG 56 (123)
Q Consensus 29 ~~~~~~~riLglD~G~kriGlAvsD~~~ 56 (123)
+..+..++.||||.|....=|+..+-.+
T Consensus 71 P~G~E~G~fLAlDlGGTNfRV~~V~L~g 98 (470)
T 3f9m_A 71 PEGSEVGDFLSLDLGGTNFRVMLVKVGE 98 (470)
T ss_dssp CCCCCCEEEEEEEESSSEEEEEEEEEEC
T ss_pred CCCCcceEEEEEEecCceEEEEEEEECC
Confidence 3334467899999999999888877543
No 135
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.24 E-value=83 Score=24.42 Aligned_cols=45 Identities=9% Similarity=0.156 Sum_probs=36.7
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 156 (314)
T 3qze_A 109 ALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV---AIPQILYN 156 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS---CSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888899999999999976 3 337777888888877 79998875
No 136
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=29.74 E-value=1.1e+02 Score=19.26 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=30.2
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhh--cccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDG--NEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~--~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+|+.+-+. +| ..+++.|.+ ..+ ++||+++
T Consensus 43 ~a~~~l~~~~~dlii~d~~l~~~~g---~~~~~~l~~~~~~~--~~pii~l 88 (147)
T 2zay_A 43 EAVPVAVKTHPHLIITEANMPKISG---MDLFNSLKKNPQTA--SIPVIAL 88 (147)
T ss_dssp HHHHHHHHHCCSEEEEESCCSSSCH---HHHHHHHHTSTTTT--TSCEEEE
T ss_pred HHHHHHHcCCCCEEEEcCCCCCCCH---HHHHHHHHcCcccC--CCCEEEE
Confidence 556666778899999997665 55 466777776 344 7888765
No 137
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=29.65 E-value=93 Score=19.70 Aligned_cols=42 Identities=7% Similarity=0.036 Sum_probs=28.8
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +|- .+.+.|.+..+ ++||+++
T Consensus 40 ~al~~~~~~~~dlvllD~~lp~~~g~---~l~~~l~~~~~--~~~ii~l 83 (141)
T 3cu5_A 40 NAIQIALKHPPNVLLTDVRMPRMDGI---ELVDNILKLYP--DCSVIFM 83 (141)
T ss_dssp HHHHHHTTSCCSEEEEESCCSSSCHH---HHHHHHHHHCT--TCEEEEE
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHH---HHHHHHHhhCC--CCcEEEE
Confidence 445566677899999987665 663 55666665555 6787765
No 138
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.42 E-value=1e+02 Score=19.29 Aligned_cols=43 Identities=5% Similarity=0.061 Sum_probs=30.0
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhh--cccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDG--NEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~--~~~~~~lpV~l~D 120 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++ ..+ ++||+++-
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g---~~~~~~lr~~~~~~--~~pii~~s 88 (144)
T 3kht_A 42 KALYQVQQAKYDLIILDIGLPIANG---FEVMSAVRKPGANQ--HTPIVILT 88 (144)
T ss_dssp HHHHHHTTCCCSEEEECTTCGGGCH---HHHHHHHHSSSTTT--TCCEEEEE
T ss_pred HHHHHhhcCCCCEEEEeCCCCCCCH---HHHHHHHHhccccc--CCCEEEEe
Confidence 566667788999999997655 45 456667766 344 78887653
No 139
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=29.18 E-value=86 Score=23.90 Aligned_cols=45 Identities=13% Similarity=0.193 Sum_probs=36.5
Q ss_pred chHHHHhhcCcCeEEEeccCC---ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE---HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~---dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. +...+.+|.+.+.+.. ++||.+.|
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~---~lPiilYn 134 (291)
T 3tak_A 87 ELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV---ELPLILYN 134 (291)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888899999999999986 3336777778888877 79998875
No 140
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=29.09 E-value=89 Score=23.98 Aligned_cols=45 Identities=11% Similarity=0.277 Sum_probs=36.5
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 141 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV---DIPVLLYN 141 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 788888899999999999986 3 336777778888877 79998875
No 141
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=29.05 E-value=77 Score=19.65 Aligned_cols=45 Identities=11% Similarity=0.202 Sum_probs=29.4
Q ss_pred chHHHHhhcCcCeEEEeccCC-C---hHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H---HEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d---Gt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. + +.....+.+.|.+..+ ++||+++
T Consensus 38 ~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~--~~~ii~l 86 (140)
T 2qr3_A 38 SLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYR--DLPVVLF 86 (140)
T ss_dssp HHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCT--TCCEEEE
T ss_pred HHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCc--CCCEEEE
Confidence 566667778899999987552 0 2123456666766665 7888765
No 142
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=29.03 E-value=90 Score=23.79 Aligned_cols=45 Identities=11% Similarity=0.259 Sum_probs=36.0
Q ss_pred chHHHHhhcCcCeEEEeccCC-Ch--HHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HH--EHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dG--t~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++++--|.. .. ..+.+|.+.+.+.. ++||.+.|
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn 133 (292)
T 2vc6_A 86 AFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS---TIPIIVYN 133 (292)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 778888899999999999986 32 36777777888777 79998865
No 143
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=28.92 E-value=33 Score=23.76 Aligned_cols=26 Identities=15% Similarity=0.128 Sum_probs=20.9
Q ss_pred CcCeEEEeccCCChH---HHHHHHHHHhh
Q 033269 82 KVLGMVVNMPKEHHE---HVSSFIEQLDG 107 (123)
Q Consensus 82 ~i~~iVVGlP~~dGt---~v~~f~~~L~~ 107 (123)
..|.||+|.|..+++ ..+.|.+++..
T Consensus 84 ~aD~iI~~sP~y~~~~p~~lK~~iD~~~~ 112 (191)
T 1t0i_A 84 ALDIIVFVTPQYNWGYPAALKNAIDRLYH 112 (191)
T ss_dssp TCSEEEEEEECBTTBCCHHHHHHHHTCST
T ss_pred hCCEEEEEeceECCCCCHHHHHHHHHHHh
Confidence 679999999999554 78888887754
No 144
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=28.48 E-value=37 Score=21.79 Aligned_cols=44 Identities=7% Similarity=0.007 Sum_probs=27.7
Q ss_pred chHH-HHhhcCcCeEEEeccCCCh--H-HHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQ-LIEKHKVLGMVVNMPKEHH--E-HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~-li~~~~i~~iVVGlP~~dG--t-~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.|.+ .+++++++.||+|-.-..+ . ..-..++.+-... +.||..+
T Consensus 98 ~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~---~~pVlvV 145 (146)
T 3s3t_A 98 TIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHA---PCNVIVI 145 (146)
T ss_dssp HHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHC---SSEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccC---CCCEEEe
Confidence 7888 8888999999999643211 1 2223445555444 5777654
No 145
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=28.12 E-value=97 Score=23.62 Aligned_cols=45 Identities=11% Similarity=0.211 Sum_probs=35.9
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 133 (294)
T 2ehh_A 86 HLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV---DIPIIIYN 133 (294)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 777888889999999999986 3 236777777888776 79998865
No 146
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.04 E-value=1.1e+02 Score=23.52 Aligned_cols=45 Identities=13% Similarity=0.293 Sum_probs=36.8
Q ss_pred chHHHHhhcCcCeEEEeccCC---ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE---HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~---dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. +-+.+.+|.+.+.+.. ++||.+.|
T Consensus 90 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~---~lPiilYn 137 (300)
T 3eb2_A 90 AQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAV---EIPVVIYT 137 (300)
T ss_dssp HHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHC---CCCEEEEE
Confidence 788888899999999999986 3336777788888877 79998876
No 147
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=28.04 E-value=1.1e+02 Score=19.06 Aligned_cols=42 Identities=5% Similarity=0.059 Sum_probs=27.5
Q ss_pred chHHHHh--hcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIE--KHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~--~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+. ...++.+++.+-+. +| ..+++.|.+..+ ++||+++
T Consensus 38 ~a~~~~~~~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~l 83 (143)
T 3jte_A 38 EGLRIFTENCNSIDVVITDMKMPKLSG---MDILREIKKITP--HMAVIIL 83 (143)
T ss_dssp HHHHHHHHTTTTCCEEEEESCCSSSCH---HHHHHHHHHHCT--TCEEEEE
T ss_pred HHHHHHHhCCCCCCEEEEeCCCCCCcH---HHHHHHHHHhCC--CCeEEEE
Confidence 4444455 56899999998766 55 345555665555 6787765
No 148
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=27.78 E-value=1.1e+02 Score=23.63 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=36.8
Q ss_pred chHHHHhhcCcCeEEEeccCC---ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE---HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~---dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. +-..+.+|.+.+.+.. ++||.+.|
T Consensus 110 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 157 (315)
T 3na8_A 110 RRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI---GVPVMLYN 157 (315)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCcEEEEe
Confidence 788888899999999999986 3337777888888877 79998875
No 149
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=27.71 E-value=1.5e+02 Score=22.90 Aligned_cols=49 Identities=8% Similarity=0.146 Sum_probs=28.8
Q ss_pred ceEEEEecCCCeEEEEEeeCCCceeecceeeeCccccc-chHHHHhhcCcCeEEE
Q 033269 35 LGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAKADQ-ELPQLIEKHKVLGMVV 88 (123)
Q Consensus 35 ~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~~~~-~L~~li~~~~i~~iVV 88 (123)
+..+|||+|+..+=+++.+.. .+.. ..+++. .+ +..++++..++..+++
T Consensus 20 ~~~iGIDiGsTt~K~V~~~~~-~i~~--~~~~~~--~~~~~l~~l~~~~~~~i~~ 69 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQDN-QRTF--KTELTK--NIDQVVEWLNQQQIEKLCL 69 (287)
T ss_dssp -CEEEEEECSSEEEEEEECSS-CEEE--EEEEGG--GHHHHHHHHHTSCCSEEEE
T ss_pred CeEEEEEEChhhEEEEEEcCC-EEEE--EEechH--HHHHHHHHhcccCceEEEE
Confidence 467999999999999998644 3332 134422 24 4444444445554433
No 150
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.59 E-value=96 Score=24.10 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=36.7
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 108 ~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~---~lPiilYn 155 (315)
T 3si9_A 108 ELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI---SIPIIIYN 155 (315)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC---CCCEEEEe
Confidence 788888899999999999986 3 336777778888877 79998875
No 151
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=27.39 E-value=82 Score=24.39 Aligned_cols=45 Identities=13% Similarity=0.184 Sum_probs=36.7
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.+
T Consensus 97 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 144 (316)
T 3e96_A 97 ELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL---DFPSLVYF 144 (316)
T ss_dssp HHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH---TSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 777888889999999999987 3 337777888888877 79999875
No 152
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=27.31 E-value=1e+02 Score=23.72 Aligned_cols=45 Identities=18% Similarity=0.378 Sum_probs=36.0
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 102 ~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~---~lPiilYn 149 (304)
T 3cpr_A 102 ELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT---EVPICLYD 149 (304)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888899999999999986 3 236777777888777 79998875
No 153
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=27.24 E-value=1e+02 Score=18.75 Aligned_cols=45 Identities=9% Similarity=0.149 Sum_probs=28.5
Q ss_pred chHHHHhhc-CcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKH-KVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~-~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+. .++.+++.+-+.++.....+.+.|++..+ ++||+++
T Consensus 40 ~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~--~~~ii~~ 85 (132)
T 2rdm_A 40 KAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDP--NMPIVYI 85 (132)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCT--TCCEEEE
T ss_pred HHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCC--CCCEEEE
Confidence 455556666 89999998654321222456667766555 7888765
No 154
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=27.16 E-value=1.2e+02 Score=19.62 Aligned_cols=43 Identities=5% Similarity=-0.001 Sum_probs=29.4
Q ss_pred chHHHHhhc--CcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKH--KVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~--~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
+..+.+.+. .++.+++.+-+. +| ..+++.|++..+ ++||+++-
T Consensus 72 ~al~~l~~~~~~~dliilD~~l~~~~g---~~~~~~lr~~~~--~~~ii~ls 118 (157)
T 3hzh_A 72 EAVIKYKNHYPNIDIVTLXITMPKMDG---ITCLSNIMEFDK--NARVIMIS 118 (157)
T ss_dssp HHHHHHHHHGGGCCEEEECSSCSSSCH---HHHHHHHHHHCT--TCCEEEEE
T ss_pred HHHHHHHhcCCCCCEEEEeccCCCccH---HHHHHHHHhhCC--CCcEEEEe
Confidence 555666667 789999997665 55 456666666555 78887653
No 155
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=27.03 E-value=1e+02 Score=24.34 Aligned_cols=45 Identities=24% Similarity=0.351 Sum_probs=36.4
Q ss_pred chHHHHhhcCcCeEEEeccCC-Ch--HHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HH--EHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dG--t~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. .. ..+.+|.+.+++.. ++||.+.|
T Consensus 117 ~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~---~lPiilYn 164 (343)
T 2v9d_A 117 ELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV---TLPVMLYN 164 (343)
T ss_dssp HHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888899999999999987 32 36777778888877 79998865
No 156
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=26.88 E-value=1e+02 Score=23.69 Aligned_cols=45 Identities=18% Similarity=0.228 Sum_probs=36.4
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 98 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 145 (306)
T 1o5k_A 98 KLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT---DLGIVVYN 145 (306)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 778888889999999999987 3 237777778888776 79998875
No 157
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.70 E-value=99 Score=23.51 Aligned_cols=45 Identities=16% Similarity=0.239 Sum_probs=36.0
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 86 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn 133 (289)
T 2yxg_A 86 ELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI---NLPIVLYN 133 (289)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888889999999999987 3 236777777888776 79998865
No 158
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=26.68 E-value=1.3e+02 Score=26.53 Aligned_cols=53 Identities=9% Similarity=0.114 Sum_probs=38.9
Q ss_pred CCCceEEEEecCCCeEEEEEeeCCCceeecceeeeCccccc-chHHHHhhcCcCeEEEe
Q 033269 32 NAGLGILGLDVGNKYIGVSLFKRHGNEVEPLTKFDRAKADQ-ELPQLIEKHKVLGMVVN 89 (123)
Q Consensus 32 ~~~~riLglD~G~kriGlAvsD~~~~~a~Pl~~i~~~~~~~-~L~~li~~~~i~~iVVG 89 (123)
.....++||-.+...+|+|..|....... +..+ .+. .|...+...++..||+-
T Consensus 128 ~~~n~l~ai~~~~~~~Gla~~D~stg~~~-~~~~----~d~~~l~~~l~~~~P~Eil~~ 181 (800)
T 1wb9_A 128 RQDNLLAAIWQDSKGFGYATLDISSGRFR-LSEP----ADRETMAAELQRTNPAELLYA 181 (800)
T ss_dssp TSCCCEEEEEECSSCEEEEEECTTTCCEE-EECC----CSHHHHHHHHHHHCCSEEEEE
T ss_pred CCCcEEEEEEEcCCEEEEEEEECCCCEEE-EEEe----cCHHHHHHHHHhcCCeEEEEc
Confidence 34567889988888999999997765332 1111 236 88888889999999986
No 159
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=26.67 E-value=1.2e+02 Score=23.28 Aligned_cols=47 Identities=4% Similarity=0.017 Sum_probs=33.3
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChH--HHHHHHHHHhhcccCCCCCEEEecCC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHE--HVSSFIEQLDGNEIYRGLPFCYFQKT 122 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt--~v~~f~~~L~~~~~~~~lpV~l~DEr 122 (123)
.+.++.+++ -+-|+|.+--. +|| .++..++.+.+.++ +.+|+.+|=+
T Consensus 76 ~f~~l~~~g-~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~--~~~I~ViDS~ 125 (297)
T 3nyi_A 76 VFRSFVEQG-FPVVCFTITTLFSGSYNSAINAKSLVLEDYP--DANICVIDSK 125 (297)
T ss_dssp HHHHHHTTT-CCEEEEESCTTTCSHHHHHHHHHHHHHHHCT--TCCEEEEECS
T ss_pred HHHHHHHCC-CeEEEEECCCcHhHHHHHHHHHHHHHHhhCC--CCeEEEEeCC
Confidence 555666555 45666666666 898 77777878877776 7899999843
No 160
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=26.42 E-value=1.2e+02 Score=21.81 Aligned_cols=41 Identities=20% Similarity=0.365 Sum_probs=26.9
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+.+.+...++++||+--+..+. ...+.+.+. ++||+++|.
T Consensus 56 ~~~~~l~~~~vdGiIi~~~~~~~----~~~~~l~~~----~iPvV~~~~ 96 (294)
T 3qk7_A 56 SLIHLVETRRVDALIVAHTQPED----FRLQYLQKQ----NFPFLALGR 96 (294)
T ss_dssp HHHHHHHHTCCSEEEECSCCSSC----HHHHHHHHT----TCCEEEESC
T ss_pred HHHHHHHcCCCCEEEEeCCCCCh----HHHHHHHhC----CCCEEEECC
Confidence 66677778899999986322232 334455543 689998885
No 161
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=26.41 E-value=1e+02 Score=23.35 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.8
Q ss_pred HHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 77 LIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 77 li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
++++.+++.|||. =+|.+..+.+.|++.+ ++||.-.
T Consensus 79 ll~~~g~d~Ivia----CNTas~~~l~~lr~~~---~iPVigi 114 (285)
T 2jfn_A 79 VQERYPLALAVVA----CNTASTVSLPALREKF---DFPVVGV 114 (285)
T ss_dssp HHHHSCCSEEEEC----CHHHHHHHHHHHHHHC---SSCEECC
T ss_pred HHHhCCCCEEEEE----CccccHHHHHHHHHhC---CCCEEeh
Confidence 4455899999999 8886666889999888 7898743
No 162
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=26.34 E-value=58 Score=22.60 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=20.4
Q ss_pred CcCeEEEeccCCChH---HHHHHHHHHhh
Q 033269 82 KVLGMVVNMPKEHHE---HVSSFIEQLDG 107 (123)
Q Consensus 82 ~i~~iVVGlP~~dGt---~v~~f~~~L~~ 107 (123)
+.+.||+|.|..+|+ ..+.|.+++..
T Consensus 52 ~aD~ii~gsP~y~g~~~~~lk~fld~~~~ 80 (188)
T 2ark_A 52 WADGLAVGSPTNMGLVSWKMKRFFDDVLG 80 (188)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHHTGG
T ss_pred hCCEEEEEeCccCCcCCHHHHHHHHHHhh
Confidence 468999999988555 78888888764
No 163
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=25.98 E-value=35 Score=22.86 Aligned_cols=44 Identities=9% Similarity=0.197 Sum_probs=27.7
Q ss_pred chHHHHhhcCcCeEEEeccCCChH---HHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHE---HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt---~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.|.+.+++++++.||+|-.-.++- ..-..++.+-... +.||..+
T Consensus 108 ~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a---~~PVLvV 154 (155)
T 3dlo_A 108 DIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKA---NKPVICI 154 (155)
T ss_dssp HHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHC---SSCEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhC---CCCEEEe
Confidence 888999999999999995322110 1223344444444 5787764
No 164
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=25.91 E-value=79 Score=23.54 Aligned_cols=42 Identities=12% Similarity=0.190 Sum_probs=28.7
Q ss_pred chHHHHhh-cCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEK-HKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~-~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+.+++.. .++++||+- | . ......+.+++.+. ++||+++|-
T Consensus 52 ~i~~~i~~~~~vDgiIi~-~-~-~~~~~~~~~~~~~~----giPvV~~~~ 94 (350)
T 3h75_A 52 QARELFQGRDKPDYLMLV-N-E-QYVAPQILRLSQGS----GIKLFIVNS 94 (350)
T ss_dssp HHHHHHHSSSCCSEEEEE-C-C-SSHHHHHHHHHTTS----CCEEEEEES
T ss_pred HHHHHHhcCCCCCEEEEe-C-c-hhhHHHHHHHHHhC----CCcEEEEcC
Confidence 56777776 899999995 4 2 12345556666543 789999874
No 165
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=25.76 E-value=1.1e+02 Score=18.28 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=28.3
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++..+ ++||.++
T Consensus 38 ~a~~~~~~~~~dlil~D~~l~~~~g---~~~~~~l~~~~~--~~~ii~~ 81 (120)
T 1tmy_A 38 EAVEKYKELKPDIVTMDITMPEMNG---IDAIKEIMKIDP--NAKIIVC 81 (120)
T ss_dssp HHHHHHHHHCCSEEEEECSCGGGCH---HHHHHHHHHHCT--TCCEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCcH---HHHHHHHHhhCC--CCeEEEE
Confidence 444556677899999987665 56 355666665554 6787765
No 166
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=25.75 E-value=1.2e+02 Score=18.56 Aligned_cols=42 Identities=7% Similarity=0.056 Sum_probs=29.3
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhc--ccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGN--EIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~--~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++. .+ ++||+++
T Consensus 38 ~a~~~l~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~~~--~~pii~~ 83 (133)
T 3nhm_A 38 SGLQQALAHPPDVLISDVNMDGMDG---YALCGHFRSEPTLK--HIPVIFV 83 (133)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCH---HHHHHHHHHSTTTT--TCCEEEE
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCH---HHHHHHHHhCCccC--CCCEEEE
Confidence 556677788999999997665 55 4556666654 33 6788765
No 167
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.74 E-value=1.1e+02 Score=23.52 Aligned_cols=45 Identities=18% Similarity=0.404 Sum_probs=36.6
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCC--CCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRG--LPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~--lpV~l~D 120 (123)
++.+..++.+++++.+--|.+ +-..+.+|.+.+++.. + +||.+.|
T Consensus 93 ~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~---~~~lPiilYn 141 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAI---GDDVPWVLQD 141 (313)
T ss_dssp HHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHH---CTTSCEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhC---CCCCcEEEEe
Confidence 788888899999999988887 4447777888888777 5 9998875
No 168
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=25.48 E-value=1.1e+02 Score=23.27 Aligned_cols=45 Identities=11% Similarity=0.217 Sum_probs=36.2
Q ss_pred chHHHHhhcCcCeEEEeccCC-C-hH--HHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H-HE--HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d-Gt--~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -+ .+.+|.+.+.+.. ++||.+.|
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 129 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAV---SIPVFLYN 129 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888889999999999987 5 33 6677777787776 79998875
No 169
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=25.47 E-value=1e+02 Score=23.49 Aligned_cols=45 Identities=9% Similarity=0.132 Sum_probs=35.9
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 90 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~---~lPiilYn 137 (293)
T 1f6k_A 90 ELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET---GSNMIVYS 137 (293)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH---CCCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEE
Confidence 778888889999999999987 3 236777777788777 78998865
No 170
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=25.27 E-value=1.6e+02 Score=20.83 Aligned_cols=39 Identities=8% Similarity=0.287 Sum_probs=25.4
Q ss_pred HHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 77 LIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 77 li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+...++++||+. |. +.+......+.+.+. ++||+++|-
T Consensus 56 ~l~~~~vdgiIi~-~~-~~~~~~~~~~~~~~~----~iPvV~~~~ 94 (291)
T 3l49_A 56 TLIAQKPDAIIEQ-LG-NLDVLNPWLQKINDA----GIPLFTVDT 94 (291)
T ss_dssp HHHHHCCSEEEEE-SS-CHHHHHHHHHHHHHT----TCCEEEESC
T ss_pred HHHHcCCCEEEEe-CC-ChhhhHHHHHHHHHC----CCcEEEecC
Confidence 3345789999986 22 223455566666653 789999874
No 171
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=25.27 E-value=1.1e+02 Score=23.43 Aligned_cols=45 Identities=16% Similarity=0.326 Sum_probs=36.1
Q ss_pred chHHHHhhcCcCeEEEeccCC-C-hH--HHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H-HE--HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d-Gt--~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -+ .+.+|.+.+.+.. ++||.+.|
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 130 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVS---PHPVYLYN 130 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEEEE
Confidence 778888889999999999987 5 33 6677777888776 78998865
No 172
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=25.26 E-value=1e+02 Score=23.46 Aligned_cols=45 Identities=16% Similarity=0.304 Sum_probs=35.9
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~---~lPiilYn 134 (292)
T 2ojp_A 87 SLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT---DLPQILYN 134 (292)
T ss_dssp HHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC---SSCEEEEC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 777777888999999999987 3 236777778888776 79998876
No 173
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.24 E-value=1.2e+02 Score=18.36 Aligned_cols=42 Identities=5% Similarity=0.097 Sum_probs=28.1
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +|- .+.+.|++..+ ++||.++
T Consensus 38 ~a~~~~~~~~~dlvl~D~~l~~~~g~---~~~~~l~~~~~--~~~ii~~ 81 (124)
T 1srr_A 38 QALDIVTKERPDLVLLDMKIPGMDGI---EILKRMKVIDE--NIRVIIM 81 (124)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTCCHH---HHHHHHHHHCT--TCEEEEE
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHH---HHHHHHHHhCC--CCCEEEE
Confidence 445556677899999987655 563 55666665554 6787765
No 174
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=25.24 E-value=1.1e+02 Score=23.68 Aligned_cols=45 Identities=9% Similarity=0.070 Sum_probs=36.6
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 97 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 144 (314)
T 3d0c_A 97 ELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL---DAPSIIYF 144 (314)
T ss_dssp HHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC---CCCEEEEe
Confidence 778888899999999999976 2 236777777888777 79999887
No 175
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=25.06 E-value=1e+02 Score=23.55 Aligned_cols=45 Identities=7% Similarity=0.093 Sum_probs=36.2
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+.+.. ++||.+.|
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~lPiilYn 133 (297)
T 2rfg_A 86 RYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI---DIPIIVYN 133 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 778888889999999999987 3 236777777888777 79998875
No 176
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.92 E-value=1.3e+02 Score=18.57 Aligned_cols=42 Identities=7% Similarity=0.052 Sum_probs=29.4
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhh--cccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDG--NEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~--~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +| ..+++.|++ ..+ ++||+++
T Consensus 45 ~a~~~l~~~~~dlii~d~~l~~~~g---~~~~~~l~~~~~~~--~~~ii~~ 90 (143)
T 3cnb_A 45 DAGDLLHTVKPDVVMLDLMMVGMDG---FSICHRIKSTPATA--NIIVIAM 90 (143)
T ss_dssp HHHHHHHHTCCSEEEEETTCTTSCH---HHHHHHHHTSTTTT--TSEEEEE
T ss_pred HHHHHHHhcCCCEEEEecccCCCcH---HHHHHHHHhCcccc--CCcEEEE
Confidence 566667778899999997665 55 456677766 344 6787765
No 177
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=24.90 E-value=1.1e+02 Score=22.05 Aligned_cols=53 Identities=15% Similarity=0.054 Sum_probs=37.2
Q ss_pred hhhhHHhhhhhhhhhccCCCCc-------eEEEEecCCCeEEEEEe---eCCC-ceeecceeee
Q 033269 14 PSHLFKFCGRVEKQCVGENAGL-------GILGLDVGNKYIGVSLF---KRHG-NEVEPLTKFD 66 (123)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~-------riLglD~G~kriGlAvs---D~~~-~~a~Pl~~i~ 66 (123)
|..-+++|+.+...+.-.+..+ ..--+++|+.++.|.++ |.+. ++-+|+..+|
T Consensus 21 ~~~~~~~iE~vi~~l~~~~~~~v~~~~~~~~W~~~~GSveV~V~l~g~~d~~~L~V~SPV~~lP 84 (163)
T 2plg_A 21 LENAVEIIETVISSLHQGDAPLVGQTDSGKIWMFRYGSAEVFVQLSGHTEEDFLTIWSPVLPLP 84 (163)
T ss_dssp TTTHHHHHHHHHHHHCCSSCCEEEEETTEEEEEEEETTEEEEEEECCSSTTCEEEEEEEEEESC
T ss_pred CccHHHHHHHHHHHhccChhhheecCCCCCceEEEECCEEEEEEecCCCCCCEEEEEEEeccCc
Confidence 4556777877777766555543 47889999999999998 3333 4556766666
No 178
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.64 E-value=1.1e+02 Score=19.02 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=27.4
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcc--cCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNE--IYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~--~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +| ..+.+.|++.. + ++||+++
T Consensus 37 ~a~~~~~~~~~dlvi~D~~l~~~~g---~~~~~~l~~~~~~~--~~~ii~~ 82 (140)
T 3n53_A 37 EALEQIDHHHPDLVILDMDIIGENS---PNLCLKLKRSKGLK--NVPLILL 82 (140)
T ss_dssp HHHHHHHHHCCSEEEEETTC---------CHHHHHHTSTTCT--TCCEEEE
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCcH---HHHHHHHHcCcccC--CCCEEEE
Confidence 556667778999999997665 44 45566666654 3 7787764
No 179
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.56 E-value=1e+02 Score=19.71 Aligned_cols=42 Identities=7% Similarity=0.031 Sum_probs=28.1
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +| ..+.+.|.+..+ ++||+++
T Consensus 38 ~a~~~l~~~~~dliild~~l~~~~g---~~~~~~l~~~~~--~~pii~l 81 (155)
T 1qkk_A 38 EALAGLSADFAGIVISDIRMPGMDG---LALFRKILALDP--DLPMILV 81 (155)
T ss_dssp HHHHTCCTTCCSEEEEESCCSSSCH---HHHHHHHHHHCT--TSCEEEE
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCH---HHHHHHHHhhCC--CCCEEEE
Confidence 444455567899999997665 55 355666666555 7888765
No 180
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=24.38 E-value=1.1e+02 Score=23.87 Aligned_cols=45 Identities=13% Similarity=0.212 Sum_probs=36.1
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--hHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--HEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--Gt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . -..+.+|.+.+++.. ++||++.|
T Consensus 120 ~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~---~lPiilYn 167 (332)
T 2r8w_A 120 ALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT---ALPLAIYN 167 (332)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 777888889999999999986 3 236777777888776 79998876
No 181
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=24.25 E-value=1.1e+02 Score=23.53 Aligned_cols=45 Identities=11% Similarity=0.138 Sum_probs=35.9
Q ss_pred chHHHHhhcCcCeEEEeccCC-Ch--HHHHHHHHHHhhcccCCC-CCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HH--EHVSSFIEQLDGNEIYRG-LPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dG--t~v~~f~~~L~~~~~~~~-lpV~l~D 120 (123)
++.+..++.+++++.+--|.. .. ..+.+|.+.+.+.. + +||.+.|
T Consensus 97 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~---~~lPiilYn 145 (303)
T 2wkj_A 97 QLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSA---DGLPMVVYN 145 (303)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH---TTCCEEEEE
T ss_pred HHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhC---CCCCEEEEe
Confidence 777888889999999999987 33 36777777888777 5 9998875
No 182
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=24.20 E-value=89 Score=22.37 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=23.3
Q ss_pred eEEEeccC--CCh-H--HHHHHHHHHhhcccCCCCCEEEec
Q 033269 85 GMVVNMPK--EHH-E--HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 85 ~iVVGlP~--~dG-t--~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.+|.|-|. .++ + .++.|++.+++..+ +..|+++|
T Consensus 8 LiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~--g~ev~~~d 46 (211)
T 3p0r_A 8 LFVKANNRPAEQAVSVKLYEAFLASYKEAHP--NDTVVELD 46 (211)
T ss_dssp EEEECCCSCTTTCHHHHHHHHHHHHHHHHCT--TSEEEEEE
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CCeEEEEE
Confidence 57889998 322 2 77888888877654 55666665
No 183
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=24.18 E-value=1.1e+02 Score=23.18 Aligned_cols=45 Identities=13% Similarity=0.285 Sum_probs=36.4
Q ss_pred chHHHHhhcCcCeEEEeccCC-C-hH--HHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H-HE--HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d-Gt--~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . .+ .+.+|.+.+.+.. ++||.+.|
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~---~lPiilYn 130 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARIS---SHSLYIYN 130 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHC---CSCEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc---CCCEEEEE
Confidence 788888889999999999987 5 34 6677777788776 79998865
No 184
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=23.99 E-value=59 Score=28.43 Aligned_cols=22 Identities=32% Similarity=0.309 Sum_probs=18.4
Q ss_pred CceEEEEecCCCeEEEEEeeCC
Q 033269 34 GLGILGLDVGNKYIGVSLFKRH 55 (123)
Q Consensus 34 ~~riLglD~G~kriGlAvsD~~ 55 (123)
|..+.|+|+|+.++=+|+++..
T Consensus 1 m~~i~GiDIGnsttev~l~~~~ 22 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDY 22 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECB
T ss_pred CcEEEEEEecCceEEEEEEEEc
Confidence 5678999999999999987754
No 185
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=23.95 E-value=1.1e+02 Score=22.91 Aligned_cols=40 Identities=10% Similarity=0.210 Sum_probs=31.8
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.||+. =+|.+..+.+.|++.+ ++||.-+
T Consensus 56 ~~~~~L~~~g~d~ivia----CNTas~~~l~~lr~~~---~iPvigi 95 (267)
T 2gzm_A 56 EMTEHLLDLNIKMLVIA----CNTATAVVLEEMQKQL---PIPVVGV 95 (267)
T ss_dssp HHHHHHHTTTCSEEEEC----CHHHHHHHHHHHHHHC---SSCEEES
T ss_pred HHHHHHHHCCCCEEEEe----CchhhHHHHHHHHHhC---CCCEEee
Confidence 45555667899999999 8887666899999888 7998753
No 186
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=23.90 E-value=1.1e+02 Score=23.18 Aligned_cols=39 Identities=8% Similarity=0.187 Sum_probs=32.4
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEE
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l 118 (123)
+..+.+.+.+++.|||. =+|.+..+.+.|++.+ ++||.=
T Consensus 58 ~~~~~L~~~g~~~IVIA----CNTa~~~al~~lr~~~---~iPvig 96 (269)
T 3ist_A 58 EMTNFLVDRGIKMLVIA----CNTATAAALYDIREKL---DIPVIG 96 (269)
T ss_dssp HHHHHHHHTTCSEEEEC----CHHHHHHHHHHHHHHC---SSCEEE
T ss_pred HHHHHHHHCCCCEEEEe----CCCccHHHHHHHHHhc---CCCEEe
Confidence 56667778999999999 8887777789999988 789874
No 187
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=23.77 E-value=58 Score=23.31 Aligned_cols=40 Identities=15% Similarity=0.395 Sum_probs=26.1
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+.+.+...++++||+- |.+ +. ...+.+.+. ++||+++|.
T Consensus 60 ~~~~~~~~~~vdgiIi~-~~~~~~----~~~~~l~~~----~iPvV~~~~ 100 (292)
T 3k4h_A 60 GVVKMVQGRQIGGIILL-YSREND----RIIQYLHEQ----NFPFVLIGK 100 (292)
T ss_dssp HHHHHHHTTCCCEEEES-CCBTTC----HHHHHHHHT----TCCEEEESC
T ss_pred HHHHHHHcCCCCEEEEe-CCCCCh----HHHHHHHHC----CCCEEEECC
Confidence 45556667899999984 433 32 345555543 789998874
No 188
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=23.65 E-value=1.1e+02 Score=21.45 Aligned_cols=43 Identities=12% Similarity=0.247 Sum_probs=25.9
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.+..++...++++||+- |.+ .+....+.+.+.+. ++|++++|.
T Consensus 50 ~i~~l~~~~~vdgii~~-~~~-~~~~~~~~~~~~~~----~ipvV~~~~ 92 (276)
T 3ksm_A 50 ILSYHLSQAPPDALILA-PNS-AEDLTPSVAQYRAR----NIPVLVVDS 92 (276)
T ss_dssp HHHHHHHHSCCSEEEEC-CSS-TTTTHHHHHHHHHT----TCCEEEESS
T ss_pred HHHHHHHhCCCCEEEEe-CCC-HHHHHHHHHHHHHC----CCcEEEEec
Confidence 45555554449999986 322 11234455566543 789998874
No 189
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=23.56 E-value=84 Score=20.32 Aligned_cols=25 Identities=12% Similarity=0.204 Sum_probs=12.2
Q ss_pred CcCeEEEeccCC-ChH----HHHHHHHHHh
Q 033269 82 KVLGMVVNMPKE-HHE----HVSSFIEQLD 106 (123)
Q Consensus 82 ~i~~iVVGlP~~-dGt----~v~~f~~~L~ 106 (123)
+.+.+|+|-|.. .|. .++.|.+.|.
T Consensus 45 ~~d~iiig~pty~~g~~p~~~~~~fl~~l~ 74 (138)
T 5nul_A 45 NEDILILGCSAMTDEVLEESEFEPFIEEIS 74 (138)
T ss_dssp TCSEEEEEECCBTTTBCCTTTHHHHHHHHG
T ss_pred hCCEEEEEcCccCCCCCChHHHHHHHHHHH
Confidence 344555555555 331 2555555554
No 190
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=23.56 E-value=83 Score=23.75 Aligned_cols=20 Identities=20% Similarity=0.331 Sum_probs=16.3
Q ss_pred EEEEecCCCeEEEEEeeCCC
Q 033269 37 ILGLDVGNKYIGVSLFKRHG 56 (123)
Q Consensus 37 iLglD~G~kriGlAvsD~~~ 56 (123)
++|+|+|+..+=+|.+...+
T Consensus 2 ~igiD~G~sntK~~~~~~~g 21 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDG 21 (320)
T ss_dssp EEEEEECSSEEEEEEECSSS
T ss_pred eEEEecCCccceEEEecCCC
Confidence 68999999999999855444
No 191
>3o3m_A Alpha subunit 2-hydroxyisocaproyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_A* 3o3o_A
Probab=23.47 E-value=85 Score=25.16 Aligned_cols=45 Identities=16% Similarity=0.176 Sum_probs=31.1
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChH--HHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHE--HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt--~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.+.++++++++|++|.=.+.. +.. ....+.+.+.+.. ++|+..++
T Consensus 325 ~i~~~~~~~~~DGvI~~~~~~C~~~~~~~~~~~~~~~~~~---gIP~l~ie 372 (408)
T 3o3m_A 325 YRVDSLVEGKCDGAFYHMNRSCKLMSLIQYEMQRRAAEET---GLPYAGFD 372 (408)
T ss_dssp HHHHHHHHTTCSEEEEEEESSCHHHHTTHHHHHHHHHHHH---CCCEEEEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcccHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 677788999999999988887 543 3333444554444 78887543
No 192
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=23.43 E-value=86 Score=22.30 Aligned_cols=40 Identities=10% Similarity=0.252 Sum_probs=25.6
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
++.+.+...++++||+-- ... ....+.+.+. ++|++++|.
T Consensus 54 ~~~~~l~~~~vdgiIi~~----~~~-~~~~~~l~~~----~iPvV~i~~ 93 (276)
T 3jy6_A 54 TLLRAIGSRGFDGLILQS----FSN-PQTVQEILHQ----QMPVVSVDR 93 (276)
T ss_dssp HHHHHHHTTTCSEEEEES----SCC-HHHHHHHHTT----SSCEEEESC
T ss_pred HHHHHHHhCCCCEEEEec----CCc-HHHHHHHHHC----CCCEEEEec
Confidence 344445567899999872 112 4566666543 789998875
No 193
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=23.37 E-value=1.4e+02 Score=18.52 Aligned_cols=45 Identities=2% Similarity=0.112 Sum_probs=31.1
Q ss_pred chHHHHhh-cCcCeEEEeccCCChHHHHHHHHHHhh--cccCCCCCEEEe
Q 033269 73 ELPQLIEK-HKVLGMVVNMPKEHHEHVSSFIEQLDG--NEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~-~~i~~iVVGlP~~dGt~v~~f~~~L~~--~~~~~~lpV~l~ 119 (123)
+..+.+.+ ..++.+++.+-+.++.....+.+.|++ ..+ ++||+++
T Consensus 40 ~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~--~~~ii~l 87 (140)
T 3lua_A 40 KFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTA--NTPVIIA 87 (140)
T ss_dssp HHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGT--TCCEEEE
T ss_pred HHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccC--CCCEEEE
Confidence 55556667 889999998655424455677777776 555 7888765
No 194
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=23.35 E-value=43 Score=22.10 Aligned_cols=11 Identities=18% Similarity=0.184 Sum_probs=5.4
Q ss_pred HHHHHHHHHhh
Q 033269 97 HVSSFIEQLDG 107 (123)
Q Consensus 97 ~v~~f~~~L~~ 107 (123)
..+.+.+.|++
T Consensus 104 a~~~l~~~l~~ 114 (148)
T 3f6r_A 104 AVPAIEERAKE 114 (148)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555543
No 195
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=22.95 E-value=62 Score=22.42 Aligned_cols=26 Identities=8% Similarity=0.080 Sum_probs=21.5
Q ss_pred CcCeEEEeccCCChH---HHHHHHHHHhh
Q 033269 82 KVLGMVVNMPKEHHE---HVSSFIEQLDG 107 (123)
Q Consensus 82 ~i~~iVVGlP~~dGt---~v~~f~~~L~~ 107 (123)
..|.||+|-|..+++ ..+.|.+++..
T Consensus 72 ~aD~ii~~sP~y~~~~p~~lK~~iD~~~~ 100 (193)
T 1rtt_A 72 AADALLFATPEYNYSMAGVLKNAIDWASR 100 (193)
T ss_dssp HCSEEEEECCEETTEECHHHHHHHHHHTC
T ss_pred hCCEEEEEccccccCcCHHHHHHHHHhcc
Confidence 468999999999554 88899998864
No 196
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=22.90 E-value=1.5e+02 Score=22.59 Aligned_cols=43 Identities=5% Similarity=0.069 Sum_probs=28.5
Q ss_pred chHHHHhhcCcCeEEEeccCC----ChH-----------------HHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE----HHE-----------------HVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~----dGt-----------------~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
++.+.+.+. +|.|-+|.|++ ||- .+-+.++.+++.. ++||.+.
T Consensus 34 ~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~---~~Pii~m 97 (271)
T 1ujp_A 34 QAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT---EKPLFLM 97 (271)
T ss_dssp HHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred HHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC---CCCEEEE
Confidence 444445556 99999999997 454 1235567777664 7898863
No 197
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.84 E-value=1.2e+02 Score=18.06 Aligned_cols=45 Identities=9% Similarity=0.052 Sum_probs=29.0
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhc--ccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGN--EIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~--~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+.++.....+.+.|++. .+ ++||.++
T Consensus 40 ~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~--~~~ii~~ 86 (127)
T 2gkg_A 40 GSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLK--NVPIVII 86 (127)
T ss_dssp HHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTT--TSCEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCcccc--CCCEEEE
Confidence 555566778899999987553011224567777665 34 7888876
No 198
>1vdd_A Recombination protein RECR; helix-hairpin-helix, zinc finger, toprim, walker B ATP binding motif; 2.50A {Deinococcus radiodurans} SCOP: e.49.1.1 PDB: 2v1c_A
Probab=22.83 E-value=1e+02 Score=23.65 Aligned_cols=51 Identities=8% Similarity=0.139 Sum_probs=31.5
Q ss_pred ceeecceeeeCccccc-chHHHHhhcCcCeEEEeccCC-ChHHHHHHHHHHhhcc
Q 033269 57 NEVEPLTKFDRAKADQ-ELPQLIEKHKVLGMVVNMPKE-HHEHVSSFIEQLDGNE 109 (123)
Q Consensus 57 ~~a~Pl~~i~~~~~~~-~L~~li~~~~i~~iVVGlP~~-dGt~v~~f~~~L~~~~ 109 (123)
...+|+.-+-..+-.+ +|.+-+ .+|+.+|+..--+ .|+..-.|..++-+.+
T Consensus 109 G~lSPldGigP~dL~i~~L~~Rl--~~V~EVIlAtnpTvEGEaTA~YI~~~Lk~~ 161 (228)
T 1vdd_A 109 GVLSPMNGVGPDKLHIKPLLPRV--GQGMEVILATGTTVEGDATALYLQRLLEPL 161 (228)
T ss_dssp SCCBGGGTBCTTTSTTGGGGGGC--CTTCEEEECCCSSHHHHHHHHHHHHHHTTS
T ss_pred CccCcccCCChhhcCHHHHHHHh--CCCCEEEEeCCCCchHHHHHHHHHHHHHHc
Confidence 3455665554222234 565555 6799999999888 8985555555444444
No 199
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=22.80 E-value=1.2e+02 Score=21.33 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=23.3
Q ss_pred eEEEeccCC-ChH---HHHHHHHHHhhcccCCCCCEEEec
Q 033269 85 GMVVNMPKE-HHE---HVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 85 ~iVVGlP~~-dGt---~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
.+|.|-|.. ++. .++.|++.+++..+ +..|.++|
T Consensus 5 Lii~gSpr~~~s~t~~l~~~~~~~~~~~~~--g~~v~~~d 42 (212)
T 3r6w_A 5 LAVHASPRGERSQSRRLAEVFLAAYREAHP--QARVARRE 42 (212)
T ss_dssp EEEECCSCSTTCHHHHHHHHHHHHHHHHCT--TCCEEEEE
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCC--CCeEEEEE
Confidence 577888886 443 77788888877654 55666665
No 200
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=22.79 E-value=1.2e+02 Score=18.82 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=28.9
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhh--cccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDG--NEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~--~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +| ..+.+.|++ ..+ ++||+++
T Consensus 42 ~a~~~l~~~~~dlii~d~~l~~~~g---~~~~~~l~~~~~~~--~~pii~~ 87 (142)
T 3cg4_A 42 QCIDLLKKGFSGVVLLDIMMPGMDG---WDTIRAILDNSLEQ--GIAIVML 87 (142)
T ss_dssp HHHHHHHTCCCEEEEEESCCSSSCH---HHHHHHHHHTTCCT--TEEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCH---HHHHHHHHhhcccC--CCCEEEE
Confidence 566667778899999997665 55 356666665 444 6777765
No 201
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=22.70 E-value=57 Score=22.40 Aligned_cols=27 Identities=11% Similarity=0.347 Sum_probs=20.7
Q ss_pred cCcCeEEEeccCCChH---HHHHHHHHHhh
Q 033269 81 HKVLGMVVNMPKEHHE---HVSSFIEQLDG 107 (123)
Q Consensus 81 ~~i~~iVVGlP~~dGt---~v~~f~~~L~~ 107 (123)
.+.|.||+|-|..+|+ ..+.|.+++..
T Consensus 70 ~~aD~ii~gsP~y~~~~~~~lk~~ld~~~~ 99 (200)
T 2a5l_A 70 KNCAGLALGSPTRFGNMASPLKYFLDGTSS 99 (200)
T ss_dssp HTCSEEEEEEECBTTBCCHHHHHHHHTCHH
T ss_pred HHCCEEEEEcChhccCccHHHHHHHHHHHH
Confidence 3578999999988555 78888887743
No 202
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=22.69 E-value=1.7e+02 Score=22.88 Aligned_cols=47 Identities=4% Similarity=-0.152 Sum_probs=31.6
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChH--HHHHHHHHHhhcccCCCCCEEEecCC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHE--HVSSFIEQLDGNEIYRGLPFCYFQKT 122 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt--~v~~f~~~L~~~~~~~~lpV~l~DEr 122 (123)
.+.++.+++ -+-|+|.+--. +|| .++.-++.+.+.++ +.+|+.+|=+
T Consensus 107 ~f~~l~~~g-~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~--~~~I~ViDS~ 156 (320)
T 3pl5_A 107 YFRQSAENG-QEVLYIAFSSVLSGTYQSAVMARDIVLEEYP--QASIEIVDTL 156 (320)
T ss_dssp HHHHHHHTT-CCEEEEECCTTTCTHHHHHHHHHHHHHHHCT--TCCEEEEECC
T ss_pred HHHHHHHCC-CeEEEEecCchHhHHHHHHHHHHHHHHhhCC--CCeEEEEcCC
Confidence 444555544 35556665555 898 67777777877776 7889999843
No 203
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=22.34 E-value=1.3e+02 Score=23.68 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=36.6
Q ss_pred chHHHHhhcCcCeEEEeccCC-C-hH--HHHHHHHHHhh-cccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H-HE--HVSSFIEQLDG-NEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d-Gt--~v~~f~~~L~~-~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. . .+ .+.+|.+.+++ .. ++||.+.|
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~---~lPiilYn 158 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAP---EIPAVIYN 158 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHST---TSCEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCC---CCcEEEEe
Confidence 888888899999999999987 5 33 67777778887 66 79998865
No 204
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.27 E-value=1.1e+02 Score=19.51 Aligned_cols=42 Identities=7% Similarity=0.042 Sum_probs=26.4
Q ss_pred chHHHHhh-cCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEK-HKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~-~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+ ..++.+++.+-+. +| ..+.+.|.+..+ ++||+++
T Consensus 40 ~a~~~l~~~~~~dlvi~d~~l~~~~g---~~~~~~l~~~~~--~~~ii~l 84 (154)
T 2qsj_A 40 DALAFLEADNTVDLILLDVNLPDAEA---IDGLVRLKRFDP--SNAVALI 84 (154)
T ss_dssp HHHHHHHTTCCCSEEEECC------C---HHHHHHHHHHCT--TSEEEEC
T ss_pred HHHHHHhccCCCCEEEEeCCCCCCch---HHHHHHHHHhCC--CCeEEEE
Confidence 55566666 7899999997654 44 355666666555 6787765
No 205
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=22.24 E-value=76 Score=21.80 Aligned_cols=26 Identities=15% Similarity=0.193 Sum_probs=19.1
Q ss_pred CcCeEEEeccCC-ChH---HHHHHHHHHhh
Q 033269 82 KVLGMVVNMPKE-HHE---HVSSFIEQLDG 107 (123)
Q Consensus 82 ~i~~iVVGlP~~-dGt---~v~~f~~~L~~ 107 (123)
+.+.+|+|.|.. .|. .++.|.+.|..
T Consensus 45 ~~d~ii~g~pt~~~G~~p~~~~~f~~~l~~ 74 (175)
T 1ag9_A 45 AYDILLLGIPTWYYGEAQCDWDDFFPTLEE 74 (175)
T ss_dssp TCSEEEEECCEETTTEECHHHHHHHHHHTT
T ss_pred hCCEEEEEEeecCCCcChHHHHHHHhhhhh
Confidence 457888888885 666 57778877764
No 206
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=21.94 E-value=1.2e+02 Score=22.63 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=31.6
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.||+. =+|.+..+.+.|++.+ ++||.-+
T Consensus 65 ~~~~~L~~~g~d~ivia----CNTas~~~l~~lr~~~---~iPvigi 104 (273)
T 2oho_A 65 ELVNFLLTQNVKMIVFA----CNTATAVAWEEVKAAL---DIPVLGV 104 (273)
T ss_dssp HHHHHHHTTTCSEEEEC----CHHHHHHHHHHHHHHC---SSCEEES
T ss_pred HHHHHHHHCCCCEEEEe----CchHhHHHHHHHHHhC---CCCEEec
Confidence 45555667899999999 8887767788999888 7998753
No 207
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=21.80 E-value=1.4e+02 Score=17.77 Aligned_cols=42 Identities=2% Similarity=-0.054 Sum_probs=28.5
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+.+++.+++.+-+. +|. ++.+.|++..+ ++||.++
T Consensus 36 ~a~~~~~~~~~dlvl~D~~l~~~~g~---~~~~~l~~~~~--~~~ii~~ 79 (116)
T 3a10_A 36 EALKKFFSGNYDLVILDIEMPGISGL---EVAGEIRKKKK--DAKIILL 79 (116)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHH---HHHHHHHHHCT--TCCEEEE
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHH---HHHHHHHccCC--CCeEEEE
Confidence 445556678899999998665 663 45566665544 6787765
No 208
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=21.56 E-value=1.6e+02 Score=22.29 Aligned_cols=42 Identities=12% Similarity=0.233 Sum_probs=32.2
Q ss_pred chHHHHhhcCcCeEEEeccCC-ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
.+.+ +.+...|.|.||.=.. ..+.+.+..+++++ + ++|++++
T Consensus 28 ~l~~-~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~---~~Piil~ 70 (235)
T 3w01_A 28 DLDA-ICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-Y---PLPLVLE 70 (235)
T ss_dssp HHHH-HHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-S---CSCEEEE
T ss_pred HHHH-HHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-c---CCCEEEe
Confidence 4444 4578899999997444 45589999999987 6 8999875
No 209
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=21.49 E-value=1.4e+02 Score=22.44 Aligned_cols=39 Identities=15% Similarity=0.342 Sum_probs=31.1
Q ss_pred chHHHHhh-cCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEE
Q 033269 73 ELPQLIEK-HKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 73 ~L~~li~~-~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l 118 (123)
+..+.+.+ .+++.+||. =+|.+..+.+.|++.+ ++||.=
T Consensus 56 ~~~~~L~~~~g~d~iViA----CNTas~~~l~~lr~~~---~iPVig 95 (272)
T 1zuw_A 56 ELTNYLLENHHIKMLVIA----CNTATAIALDDIQRSV---GIPVVG 95 (272)
T ss_dssp HHHHHHHHHSCCSEEEEC----CHHHHHHHHHHHHHHC---SSCEEE
T ss_pred HHHHHHHhhcCCCEEEEe----CchhhHHHHHHHHHHC---CCCEEc
Confidence 45555566 899999999 8887666789999888 789875
No 210
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=21.48 E-value=1.5e+02 Score=18.18 Aligned_cols=41 Identities=12% Similarity=0.085 Sum_probs=27.6
Q ss_pred chHHHHhhcCcCeEEEeccCC---ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE---HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~---dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +| ..+.+.|.+. + ++||+++
T Consensus 45 ~a~~~~~~~~~dlii~d~~~~~~~~g---~~~~~~l~~~-~--~~~ii~l 88 (140)
T 3cg0_A 45 EAVRCAPDLRPDIALVDIMLCGALDG---VETAARLAAG-C--NLPIIFI 88 (140)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSSSCH---HHHHHHHHHH-S--CCCEEEE
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCCH---HHHHHHHHhC-C--CCCEEEE
Confidence 555666778899999997552 44 3455566554 4 7888765
No 211
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=21.31 E-value=1.1e+02 Score=23.90 Aligned_cols=37 Identities=0% Similarity=-0.026 Sum_probs=30.0
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCE
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPF 116 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV 116 (123)
.|.+++++++++.|++| ..+.-++++-+|+.++ +.+.
T Consensus 77 ~La~li~~~~pdlVL~g----~ts~G~~laprlAa~L---~~~~ 113 (315)
T 1efv_A 77 LILATQKQFNYTHICAG----ASAFGKNLLPRVAAKL---EVAP 113 (315)
T ss_dssp HHHHHHHHHCCSEEEEE----SSHHHHHHHHHHHHHH---TCCC
T ss_pred HHHHHHHhcCCCEEEEc----CCCCcchHHHHHHHHh---CCCc
Confidence 78888999999999999 6556678888888877 5553
No 212
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=21.25 E-value=49 Score=22.44 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=21.0
Q ss_pred cCcCeEEEeccCCChH---HHHHHHHHHh
Q 033269 81 HKVLGMVVNMPKEHHE---HVSSFIEQLD 106 (123)
Q Consensus 81 ~~i~~iVVGlP~~dGt---~v~~f~~~L~ 106 (123)
.+.|.||+|.|..+|+ ..+.|.+++.
T Consensus 70 ~~aD~ii~~~P~y~~~~p~~lK~~iD~~~ 98 (184)
T 1rli_A 70 LQCHILIFATPIYWFGMSGTLKLFIDRWS 98 (184)
T ss_dssp HTCSEEEEEEECBTTBCCHHHHHHHHTHH
T ss_pred HhCCEEEEEeCccccCCcHHHHHHHHHhH
Confidence 3689999999999555 7788888764
No 213
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=21.22 E-value=1.2e+02 Score=21.40 Aligned_cols=79 Identities=16% Similarity=0.219 Sum_probs=39.2
Q ss_pred EEEecCCCeEEEEEeeCCCcee-------------ecceeeeC-cccc---c-chHHHHhhcCcCeEEEeccCC-C-hHH
Q 033269 38 LGLDVGNKYIGVSLFKRHGNEV-------------EPLTKFDR-AKAD---Q-ELPQLIEKHKVLGMVVNMPKE-H-HEH 97 (123)
Q Consensus 38 LglD~G~kriGlAvsD~~~~~a-------------~Pl~~i~~-~~~~---~-~L~~li~~~~i~~iVVGlP~~-d-Gt~ 97 (123)
.++--++++||+.+.+....+- .++.++.. .+.+ . ++.+.+...++++||+- |.+ . .+.
T Consensus 9 ~~~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~-~~~~~~~~~ 87 (298)
T 3tb6_A 9 KSALHSNKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVE-PTKSALQTP 87 (298)
T ss_dssp ------CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEC-CSSTTSCCT
T ss_pred HhhcccCceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEe-cccccccCC
Confidence 3445566889998887544211 12222211 1111 1 33333446899999985 332 1 113
Q ss_pred HHHHHHHHhhcccCCCCCEEEecC
Q 033269 98 VSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 98 v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
...+.+.+.+. ++||+++|.
T Consensus 88 ~~~~~~~~~~~----~iPvV~~~~ 107 (298)
T 3tb6_A 88 NIGYYLNLEKN----GIPFAMINA 107 (298)
T ss_dssp THHHHHHHHHT----TCCEEEESS
T ss_pred cHHHHHHHHhc----CCCEEEEec
Confidence 34555666543 789999874
No 214
>3n2q_A Sex pheromone staph-CAM373; structural genomics, MCSG, PSI-2, protein structure initiati midwest center for structural genomics; 2.55A {Bacillus cereus}
Probab=21.05 E-value=82 Score=24.83 Aligned_cols=38 Identities=16% Similarity=0.405 Sum_probs=24.8
Q ss_pred cCcCeEEEeccCC--ChH---------HHHHHHHHHhhcccCCCCCEEE
Q 033269 81 HKVLGMVVNMPKE--HHE---------HVSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 81 ~~i~~iVVGlP~~--dGt---------~v~~f~~~L~~~~~~~~lpV~l 118 (123)
.+..+|+||+-+| +-. .+.+..++|++.-...++||++
T Consensus 86 ~~L~GisIGLamNsv~s~~~~~~~Gk~~A~~iv~rlR~~~~l~~vPI~i 134 (287)
T 3n2q_A 86 LSLSGVMIGLAMSSSVSNEEAMSKGTEVAKQLIEAINKNDKYNKSPITF 134 (287)
T ss_dssp SEEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCCEEE
T ss_pred EEEccEEEEEEecCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 3467999999988 322 5666666776532223789874
No 215
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=20.82 E-value=1.7e+02 Score=22.45 Aligned_cols=45 Identities=7% Similarity=0.078 Sum_probs=36.1
Q ss_pred chHHHHhhcCcCeEEEeccCC------ChHHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE------HHEHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~------dGt~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. +-+.+.+|.+.+++.. ++||.+.|
T Consensus 94 ~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~---~lPiilYn 144 (309)
T 3fkr_A 94 ARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAI---AIPIMVQD 144 (309)
T ss_dssp HHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhc---CCCEEEEe
Confidence 788888899999999998872 3346777778888877 79998876
No 216
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=20.77 E-value=48 Score=22.38 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=14.0
Q ss_pred cCeEEEeccCC-ChH---HHHHHHHHHh
Q 033269 83 VLGMVVNMPKE-HHE---HVSSFIEQLD 106 (123)
Q Consensus 83 i~~iVVGlP~~-dGt---~v~~f~~~L~ 106 (123)
.+.+|+|.|.. .|. .++.|.+.|.
T Consensus 47 ~d~ii~g~pty~~g~~p~~~~~f~~~l~ 74 (169)
T 1czn_A 47 YDYLIIGCPTWNVGELQSDWEGIYDDLD 74 (169)
T ss_dssp CSEEEEECCEETTTEECHHHHHHGGGGG
T ss_pred CCEEEEEecccCCCcCCHHHHHHHHHhh
Confidence 45666666665 554 4555665554
No 217
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=20.63 E-value=57 Score=21.04 Aligned_cols=46 Identities=15% Similarity=0.047 Sum_probs=28.3
Q ss_pred chHHHHhhcCcCeEEEeccCCChHH--HHHHHHHHhhcccCCCCCEEEecC
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEH--VSSFIEQLDGNEIYRGLPFCYFQK 121 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~--v~~f~~~L~~~~~~~~lpV~l~DE 121 (123)
.|.+..++++++.||+|-.-..+-. .-..++.+-... +.||..+-.
T Consensus 100 ~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~---~~pVlvv~~ 147 (150)
T 3tnj_A 100 EIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYA---KCDVLAVRL 147 (150)
T ss_dssp HHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHC---SSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhC---CCCEEEEeC
Confidence 8888999999999999953221111 112255555555 678877643
No 218
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=20.46 E-value=1.6e+02 Score=18.13 Aligned_cols=42 Identities=12% Similarity=-0.004 Sum_probs=27.6
Q ss_pred chHHHHhhcCcCeEEEeccCC--ChHHHHHHHHHHhhcccCCCCCEEEe
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE--HHEHVSSFIEQLDGNEIYRGLPFCYF 119 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~--dGt~v~~f~~~L~~~~~~~~lpV~l~ 119 (123)
+..+.+.+..++.+++.+-+. +|- .+.+.|++..+ ++||.++
T Consensus 38 ~al~~~~~~~~dlvl~D~~l~~~~g~---~~~~~l~~~~~--~~~ii~~ 81 (132)
T 3crn_A 38 EGLAKIENEFFNLALFXIKLPDMEGT---ELLEKAHKLRP--GMKKIMV 81 (132)
T ss_dssp HHHHHHHHSCCSEEEECSBCSSSBHH---HHHHHHHHHCT--TSEEEEE
T ss_pred HHHHHHhcCCCCEEEEecCCCCCchH---HHHHHHHhhCC--CCcEEEE
Confidence 455566678899999987665 563 45556655444 6777765
No 219
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=20.31 E-value=1.4e+02 Score=23.16 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=35.2
Q ss_pred chHHHHhhcCcCeEEEeccCC-C--h--HHHHHHHHHHhhcccCCCCCEEEec
Q 033269 73 ELPQLIEKHKVLGMVVNMPKE-H--H--EHVSSFIEQLDGNEIYRGLPFCYFQ 120 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~-d--G--t~v~~f~~~L~~~~~~~~lpV~l~D 120 (123)
++.+..++.+++++.+--|.. + - +.+.+|.+.+.+.. ++||.+.|
T Consensus 97 ~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~---~lPiilYn 146 (318)
T 3qfe_A 97 EHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS---PLPVVIYN 146 (318)
T ss_dssp HHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC---SSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC---CCCEEEEe
Confidence 778888889999999999954 3 2 26777778888777 79998875
No 220
>3cpe_A Terminase, DNA packaging protein GP17; large terminase, alternative initiation, ATP-binding, DNA- binding, hydrolase, nuclease; HET: DNA; 2.80A {Bacteriophage T4} PDB: 3ezk_A*
Probab=20.10 E-value=2.2e+02 Score=23.66 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=42.0
Q ss_pred ceEEEEec----CCCeEEEEEeeCCCceeecceeeeCcc---ccc--chHHHHhhcCcCeEEEeccCCChHHHHHHHHHH
Q 033269 35 LGILGLDV----GNKYIGVSLFKRHGNEVEPLTKFDRAK---ADQ--ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQL 105 (123)
Q Consensus 35 ~riLglD~----G~kriGlAvsD~~~~~a~Pl~~i~~~~---~~~--~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L 105 (123)
..++|+|+ |...+++++.+..+..-.=+..+..+. ..+ .|.++.++|++..|++= ....-..+++.|
T Consensus 420 ~~~~GvD~S~G~~~D~tai~v~~~~g~~~~~v~~~~~~~~~~~~~~~~I~~l~~~y~~~~I~iD----~~g~G~~l~~~L 495 (592)
T 3cpe_A 420 KYIATLDCSEGRGQDYHALHIIDVTDDVWEQVGVLHSNTISHLILPDIVMRYLVEYNECPVYIE----LNSTGVSVAKSL 495 (592)
T ss_dssp CEEEEEECCSSBTTBCEEEEEEECSSSSEEEEEEEEESSSCTTTHHHHHHHHHHHTTSCCEEEE----ESHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCceEEEEEEcCCCceEEEEEEecCCCCHHHHHHHHHHHHHHcCCcEEEEe----cCCCcHHHHHHH
Confidence 45899999 567788888765442000011222111 223 88888899999888774 222334566677
Q ss_pred hhcc
Q 033269 106 DGNE 109 (123)
Q Consensus 106 ~~~~ 109 (123)
++.+
T Consensus 496 ~~~~ 499 (592)
T 3cpe_A 496 YMDL 499 (592)
T ss_dssp HTTS
T ss_pred HHHh
Confidence 7543
No 221
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=20.08 E-value=1e+02 Score=23.69 Aligned_cols=39 Identities=10% Similarity=0.205 Sum_probs=30.9
Q ss_pred chHHHHhhcCcCeEEEeccCCChHHHHHHHHHHhhcccCCCCCEEE
Q 033269 73 ELPQLIEKHKVLGMVVNMPKEHHEHVSSFIEQLDGNEIYRGLPFCY 118 (123)
Q Consensus 73 ~L~~li~~~~i~~iVVGlP~~dGt~v~~f~~~L~~~~~~~~lpV~l 118 (123)
+..+++.+.+++.|||- =+|.+..+.+.|++.+ ++||.=
T Consensus 77 ~~~~~L~~~g~d~IVIA----CNTa~~~al~~lr~~~---~iPvig 115 (274)
T 3uhf_A 77 EALDFFEQFQIDMLIIA----CNTASAYALDALRAKA---HFPVYG 115 (274)
T ss_dssp HHHHHHTTSCCSEEEEC----CHHHHHHSHHHHHHHC---SSCEEC
T ss_pred HHHHHHHHCCCCEEEEe----CCChhHHHHHHHHHhc---CCCEEc
Confidence 44556678899999999 8887766678999888 788863
Done!