BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033273
MARYNSSYLDYIYAFSLPLPLFFFMLILFFVLGLSWYINYESVFEDFMNQVKFYLMLSPL
ILLLIVHCLSGGVPFFSPFPAEPDALHRAGGSPWGVAALLVLVLFMVSHQSSLHERWFPL
ITK

High Scoring Gene Products

Symbol, full name Information P value
AT5G19875 protein from Arabidopsis thaliana 1.4e-16
AT2G31940 protein from Arabidopsis thaliana 1.4e-09
AT2G21180 protein from Arabidopsis thaliana 0.00088

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033273
        (123 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006622 - symbol:AT5G19875 "AT5G19875" speci...   205  1.4e-16   1
TAIR|locus:2045203 - symbol:AT2G31940 species:3702 "Arabi...   139  1.4e-09   1
TAIR|locus:2047062 - symbol:AT2G21180 "AT2G21180" species...    58  0.00088   2


>TAIR|locus:505006622 [details] [associations]
            symbol:AT5G19875 "AT5G19875" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0006979 "response to oxidative
            stress" evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0006979 EMBL:AY088348 EMBL:BT004721 EMBL:AK119148
            IPI:IPI00547153 RefSeq:NP_568384.1 UniGene:At.31243 IntAct:Q8L9M7
            EnsemblPlants:AT5G19875.1 GeneID:832109 KEGG:ath:AT5G19875
            TAIR:At5g19875 eggNOG:NOG269306 HOGENOM:HOG000239909
            InParanoid:Q8L9M7 OMA:RAGSSPW PhylomeDB:Q8L9M7
            ProtClustDB:CLSN2917680 Genevestigator:Q8L9M7 Uniprot:Q8L9M7
        Length = 123

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 46/126 (36%), Positives = 60/126 (47%)

Query:     1 MAR---YNSSYLDYIYAXXXXXXXXXXXXXXXXXXXXSWYINYESVFEDFMNQVKFYXXX 57
             MAR   Y SSYLDY+                      +WY+N+ES+ ED ++ +K     
Sbjct:     1 MARSPYYGSSYLDYL--SLPNPHLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIF 58

Query:    58 XXXXXXXXXXXXSGGVPFFSPFPAEPDALHRAGGSPWGXXXXXXXXXFMVSHQSSLHERW 117
                         SGG+ F+ P+P E D++HRAG SPWG         FMVS+QS   ERW
Sbjct:    59 TPLFLLLLVHFFSGGLSFYVPWP-EQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERW 117

Query:   118 FPLITK 123
             FP   K
Sbjct:   118 FPFGAK 123


>TAIR|locus:2045203 [details] [associations]
            symbol:AT2G31940 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006533 HOGENOM:HOG000239909
            IPI:IPI00529462 PIR:A84727 RefSeq:NP_565731.1 UniGene:At.38144
            EnsemblPlants:AT2G31940.1 GeneID:817752 KEGG:ath:AT2G31940
            TAIR:At2g31940 eggNOG:NOG250310 InParanoid:Q9SKA6 OMA:RDSIHRA
            PhylomeDB:Q9SKA6 ProtClustDB:CLSN2917209 ArrayExpress:Q9SKA6
            Genevestigator:Q9SKA6 Uniprot:Q9SKA6
        Length = 120

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 34/91 (37%), Positives = 41/91 (45%)

Query:    35 SWYINYESVFEDFMNQVKFYXXXXXXXXXXXXXXXS-----GGVPFFSPFPAEPDALHRA 89
             SWY +YE V E F  Q K                 S     GG+        E ++L+RA
Sbjct:    29 SWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQGVGGMMTSLIHLNERESLYRA 88

Query:    90 GGSPWGXXXXXXXXXFMVSHQSSLHERWFPL 120
             GG+PWG         FMVS+QS   ERWFPL
Sbjct:    89 GGTPWGVAFMLVFLFFMVSYQSQFQERWFPL 119


>TAIR|locus:2047062 [details] [associations]
            symbol:AT2G21180 "AT2G21180" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC006264 HOGENOM:HOG000239909 EMBL:AY045652 EMBL:AY059663
            IPI:IPI00540068 PIR:B84598 RefSeq:NP_565499.1 UniGene:At.13704
            UniGene:At.71960 STRING:Q9SKP5 EnsemblPlants:AT2G21180.1
            GeneID:816653 KEGG:ath:AT2G21180 TAIR:At2g21180 eggNOG:NOG249821
            InParanoid:Q9SKP5 OMA:VLLIRWI PhylomeDB:Q9SKP5
            ProtClustDB:CLSN2914966 ArrayExpress:Q9SKP5 Genevestigator:Q9SKP5
            Uniprot:Q9SKP5
        Length = 131

 Score = 58 (25.5 bits), Expect = 0.00088, Sum P(2) = 0.00088
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query:    83 PDALHRAGGSPWGXXXXXXXXXFMVSHQSSLHERW 117
             P A    G SPWG          ++ +QSS  E W
Sbjct:    95 PGAGGDGGSSPWGVAALIVLLLVLLQYQSSFLEMW 129

 Score = 40 (19.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
 Identities = 7/19 (36%), Positives = 9/19 (47%)

Query:    35 SWYINYESVFEDFMNQVKF 53
             SWY + E   E    Q+ F
Sbjct:    37 SWYFSLEEAAESAEEQINF 55


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.466    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      123        79   0.00091  102 3  11 22  0.38    29
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  557 (59 KB)
  Total size of DFA:  117 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.58u 0.15s 6.73t   Elapsed:  00:00:00
  Total cpu time:  6.58u 0.15s 6.73t   Elapsed:  00:00:00
  Start:  Fri May 10 21:18:49 2013   End:  Fri May 10 21:18:49 2013

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