BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033274
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 6 LFLIILFLITSLVANASAMNKPA--SYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVI 63
LF + LI L S + PA S N+ LQ+ G EC A EL C I
Sbjct: 8 LFSTVTLLIILLNTTVSGRDLPAESSTNIAARLQSGG-----LMECWNALYELKSCTNEI 62
Query: 64 YQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR-----AISPA 117
FF G T +G CC +++ +T C WP+ L G+TP+++N+L +C+ SPA
Sbjct: 63 VLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPA 121
Query: 118 PSP 120
PSP
Sbjct: 122 PSP 124
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 6 LFLIILFLITSLVANASAMNKP---ASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAV 62
LF+ + L LV N S+ P S N+ L GG +C A EL C
Sbjct: 8 LFVTVTLL---LVLNVSSRALPPVADSTNIAARLT-----GGGLMQCWDALYELKSCTNE 59
Query: 63 IYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCRA-----ISP 116
I FF G T +G CC A++ +T C WP+ L G+T +++N+L +C++ SP
Sbjct: 60 IVLFFLNGETKLGYGCCNAVDVITTDC-WPAMLTSLGFTLEETNVLRGFCQSPNSGGSSP 118
Query: 117 APSPAQ 122
A SP +
Sbjct: 119 ALSPVK 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 43 GGQFNECLKAYQELNKCLAVIYQFFFTGMTNVG-PCCGAIENVTRKCAWPSTLPWFGYTP 101
GG EC A EL C I FF G T +G CC A+E +T C WP+ L G+T
Sbjct: 40 GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTS 98
Query: 102 QQSNILLSYCRA 113
++N+L +C++
Sbjct: 99 DETNVLRGFCQS 110
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 49 CLKAYQELNKCLAVIYQFFFTGMTNVGP-CCGAIENVTRKCAWPSTLPWFGYTPQQSNIL 107
C + +L C + FF G T +GP CC AI + RKC WP+ + G+T Q+ ++L
Sbjct: 57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC-WPTMIGVLGFTAQEGDML 115
Query: 108 LSYCRA 113
YC
Sbjct: 116 QGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 19/129 (14%)
Query: 7 FLIILFLITSLVANASAMNKPASYNLKEGLQASGGPGGQFNECLKAYQELNKCLAVIYQF 66
FL++ +LI++ A + + K SG G +C A EL C I +F
Sbjct: 14 FLMMSYLISTFHVITVAEGRTLQFT-KMATDHSGA--GNLMDCWNAGLELKSCTDEIVKF 70
Query: 67 FFTGMTNVGP---------CCGAIENVTRKCAWPSTLPWFGYTPQQSNILLSYCR----- 112
F + P CCGAI V + C W G T + N L YC
Sbjct: 71 FLSQTGTSEPPVKGGIDKDCCGAIGLVVKDC-WSVMFTSLGLTTMEGNNLREYCEFQAEK 129
Query: 113 -AISPAPSP 120
+SP+P+P
Sbjct: 130 SELSPSPAP 138
>sp|A4VPC3|ISPE_PSEU5 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase OS=Pseudomonas
stutzeri (strain A1501) GN=ispE PE=3 SV=1
Length = 284
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 43 GGQFNECL----KAYQELNKCLAVIYQFFFTGMTNVGPCC-------GAIENVTRKCAWP 91
GG N+C K Y E+ L+++ +F MT G C G + V R+ P
Sbjct: 198 GGGHNDCQPIVEKRYPEVRNALSLLNKFVPASMTGTGACVFGSFPNEGEADKVRRQL--P 255
Query: 92 STLPWF 97
TLP F
Sbjct: 256 DTLPSF 261
>sp|Q9FGN3|FB290_ARATH F-box protein At5g51380 OS=Arabidopsis thaliana GN=At5g51380 PE=2
SV=1
Length = 479
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 68 FTGMTNVGPCCGAIENVT-----RKCAWPSTLPWFGYTPQQSNILLSYCRAISPAPSPAQ 122
F G+ +G CC +E ++ W + L +F +L+S CR I +P P +
Sbjct: 278 FDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYF---ESLKTLLISSCRKIDSSPGPGK 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,146,670
Number of Sequences: 539616
Number of extensions: 1726561
Number of successful extensions: 3193
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3186
Number of HSP's gapped (non-prelim): 8
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)