Your job contains 1 sequence.
>033276
MEISSKNNEIVDVSYVDDECSEQSWMLRSLSESTVACITGDYAMQNVILQMGLRLLAPGG
MQIRQLHRYIVDKCLKLFSSPFPLVICIKSNHEIRISPVFMLILICLYIQVDTEMPCLLH
YHC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033276
(123 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163071 - symbol:NOB1 species:3702 "Arabidopsi... 264 5.7e-22 1
UNIPROTKB|Q3T042 - symbol:NOB1 "RNA-binding protein NOB1"... 120 1.1e-06 1
UNIPROTKB|Q9ULX3 - symbol:NOB1 "RNA-binding protein NOB1"... 119 1.4e-06 1
MGI|MGI:1914869 - symbol:Nob1 "NIN1/RPN12 binding protein... 118 1.7e-06 1
RGD|735222 - symbol:Nob1 "NIN1/RPN12 binding protein 1 ho... 118 1.7e-06 1
SGD|S000005582 - symbol:NOB1 "Protein involved in proteas... 102 0.00011 1
POMBASE|SPAC1486.09 - symbol:SPAC1486.09 "ribosome biogen... 101 0.00011 1
FB|FBgn0030177 - symbol:CG2972 species:7227 "Drosophila m... 101 0.00015 1
WB|WBGene00021843 - symbol:Y54E10BR.4 species:6239 "Caeno... 98 0.00021 1
>TAIR|locus:2163071 [details] [associations]
symbol:NOB1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006606 "protein import
into nucleus" evidence=RCA] [GO:0000469 "cleavage involved in rRNA
processing" evidence=IDA] [GO:0004521 "endoribonuclease activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] EMBL:CP002688 EMBL:AB010072 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY IPI:IPI00524371 RefSeq:NP_198935.1
UniGene:At.51074 ProteinModelPortal:Q9FLL1 SMR:Q9FLL1 STRING:Q9FLL1
PRIDE:Q9FLL1 EnsemblPlants:AT5G41190.1 GeneID:834121
KEGG:ath:AT5G41190 TAIR:At5g41190 InParanoid:Q9FLL1
PhylomeDB:Q9FLL1 ProtClustDB:CLSN2686224 Genevestigator:Q9FLL1
Uniprot:Q9FLL1
Length = 602
Score = 264 (98.0 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 54/75 (72%), Positives = 64/75 (85%)
Query: 1 MEISSKNNEIVDVSYV-DDECSEQSWMLRSLSESTVACITGDYAMQNVILQMGLRLLAPG 59
+EI+S+ + + S + DD SEQSW LR+LSES+VACITGDYAMQNVILQMGLRLLAPG
Sbjct: 389 LEIASEAEDTFEASSIGDDGSSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPG 448
Query: 60 GMQIRQLHRYIVDKC 74
GMQIRQLHR+I+ KC
Sbjct: 449 GMQIRQLHRWIL-KC 462
>UNIPROTKB|Q3T042 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 EMBL:AY336977 EMBL:BC102577
IPI:IPI00690132 RefSeq:NP_898906.1 UniGene:Bt.49199
ProteinModelPortal:Q3T042 SMR:Q3T042 STRING:Q3T042 PRIDE:Q3T042
GeneID:360191 KEGG:bta:360191 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 InParanoid:Q3T042 KO:K11883
OrthoDB:EOG4S4PGJ NextBio:20812791 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 Uniprot:Q3T042
Length = 413
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKCLKLF--SSPFPLVIC 87
V C+T D+AMQNV+LQMGL +LA GM IR+ YI+ +C F +S V C
Sbjct: 233 VGCVTTDFAMQNVLLQMGLHVLAVNGMLIREARSYIL-RCHGCFKTTSDMSRVFC 286
>UNIPROTKB|Q9ULX3 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CleanEx:HS_ART4 CTD:28987
eggNOG:COG1439 HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883
OrthoDB:EOG4S4PGJ InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 EMBL:AB026125 EMBL:AY487344
EMBL:AK001028 EMBL:BC000050 EMBL:BC064630 EMBL:AF190161
IPI:IPI00022373 PIR:A61382 RefSeq:NP_054781.1 UniGene:Hs.271695
ProteinModelPortal:Q9ULX3 SMR:Q9ULX3 IntAct:Q9ULX3 STRING:Q9ULX3
DMDM:74753398 PaxDb:Q9ULX3 PRIDE:Q9ULX3 DNASU:28987
Ensembl:ENST00000268802 GeneID:28987 KEGG:hsa:28987 UCSC:uc002exs.3
GeneCards:GC16M069775 HGNC:HGNC:29540 HPA:HPA049430 MIM:613586
neXtProt:NX_Q9ULX3 PharmGKB:PA143485585 InParanoid:Q9ULX3
OMA:KEPLPEY GenomeRNAi:28987 NextBio:51895 Bgee:Q9ULX3
CleanEx:HS_NOB1 Genevestigator:Q9ULX3 GermOnline:ENSG00000141101
Uniprot:Q9ULX3
Length = 412
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKCLKLF--SSPFPLVIC 87
V C+T D+AMQNV+LQMGL +LA GM IR+ YI+ +C F +S V C
Sbjct: 232 VGCLTTDFAMQNVLLQMGLHVLAVNGMLIREARSYIL-RCHGCFKTTSDMSRVFC 285
>MGI|MGI:1914869 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISA] [GO:0005730 "nucleolus" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
MGI:MGI:1914869 InterPro:IPR006596 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0030490 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY EMBL:AK075755 EMBL:AK021194
EMBL:BC054835 EMBL:BC103793 IPI:IPI00225974 RefSeq:NP_080553.1
UniGene:Mm.334793 PDB:2CON PDBsum:2CON ProteinModelPortal:Q8BW10
SMR:Q8BW10 IntAct:Q8BW10 STRING:Q8BW10 PhosphoSite:Q8BW10
PaxDb:Q8BW10 PRIDE:Q8BW10 Ensembl:ENSMUST00000003946 GeneID:67619
KEGG:mmu:67619 GeneTree:ENSGT00390000015857 InParanoid:Q8BW10
ChiTaRS:NOB1 EvolutionaryTrace:Q8BW10 NextBio:325057 Bgee:Q8BW10
Genevestigator:Q8BW10 GermOnline:ENSMUSG00000003848 Uniprot:Q8BW10
Length = 403
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKCLKLF--SSPFPLVIC 87
V C+T D+AMQNV+LQMGL +LA GM +R+ YI+ +C F +S V C
Sbjct: 223 VGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARSYIL-RCHGCFKTTSDMNRVFC 276
>RGD|735222 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006596 RGD:735222 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
EMBL:AY341886 EMBL:BC126076 IPI:IPI00396864 RefSeq:NP_954517.1
UniGene:Rn.102586 ProteinModelPortal:Q6VEU1 SMR:Q6VEU1
STRING:Q6VEU1 Ensembl:ENSRNOT00000034386 GeneID:291996
KEGG:rno:291996 UCSC:RGD:735222 InParanoid:Q6VEU1 NextBio:633580
ArrayExpress:Q6VEU1 Genevestigator:Q6VEU1
GermOnline:ENSRNOG00000021890 Uniprot:Q6VEU1
Length = 410
Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKCLKLF--SSPFPLVIC 87
V C+T D+AMQNV+LQMGL +LA GM +R+ YI+ +C F +S V C
Sbjct: 230 VGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARSYIL-RCHGCFKTTSDMNRVFC 283
>SGD|S000005582 [details] [associations]
symbol:NOB1 "Protein involved in proteasomal and 40S
ribosomal subunit biogenesis" species:4932 "Saccharomyces
cerevisiae" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IDA;IPI] [GO:0070181 "SSU rRNA binding" evidence=IDA]
[GO:0043248 "proteasome assembly" evidence=IMP;IPI] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEP;IMP] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030688 "preribosome, small subunit
precursor" evidence=IDA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0004521 "endoribonuclease
activity" evidence=IDA] [GO:0030490 "maturation of SSU-rRNA"
evidence=IDA] SGD:S000005582 InterPro:IPR006596 GO:GO:0005783
GO:GO:0005737 GO:GO:0005730 EMBL:BK006948 GO:GO:0046872
GO:GO:0043248 GO:GO:0004521 EMBL:Z70678 GO:GO:0070181 GO:GO:0000462
SMART:SM00670 GO:GO:0030688 eggNOG:COG1439 HOGENOM:HOG000159692
KO:K11883 InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
HSSP:Q8BW10 OrthoDB:EOG4CRQ7R EMBL:Z74964 PIR:S66939
RefSeq:NP_014699.1 ProteinModelPortal:Q08444 SMR:Q08444
DIP:DIP-6440N IntAct:Q08444 MINT:MINT-621960 STRING:Q08444
PaxDb:Q08444 PeptideAtlas:Q08444 EnsemblFungi:YOR056C GeneID:854221
KEGG:sce:YOR056C CYGD:YOR056c NextBio:976086 Genevestigator:Q08444
Uniprot:Q08444
Length = 459
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 19 ECSEQS-WMLRSLSESTVACITGDYAMQNVILQMGLRLLA-PGGMQIRQLHRYIV--DKC 74
E SE+ + + E+ VA TGD+A+QNV LQM L L+ G++I+++ Y++ C
Sbjct: 248 EASEEDRHVALNRPENQVALATGDFAVQNVALQMNLNLMNFMSGLKIKRIRNYMLRCHAC 307
Query: 75 LKLFSSP 81
K+F P
Sbjct: 308 FKIFPLP 314
>POMBASE|SPAC1486.09 [details] [associations]
symbol:SPAC1486.09 "ribosome biogenesis protein Nob1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004521 "endoribonuclease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030688 "preribosome, small subunit precursor" evidence=ISO]
[GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO]
[GO:0043248 "proteasome assembly" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] PomBase:SPAC1486.09 InterPro:IPR006596
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003723 GO:GO:0043248
GO:GO:0004521 GO:GO:0042274 SMART:SM00670 GO:GO:0030688
eggNOG:COG1439 HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 PIR:T50078
RefSeq:NP_594097.1 HSSP:Q8BW10 ProteinModelPortal:Q9UTK0
STRING:Q9UTK0 EnsemblFungi:SPAC1486.09.1 GeneID:2541448
KEGG:spo:SPAC1486.09 OMA:TTSVMTK OrthoDB:EOG4CRQ7R NextBio:20802550
Uniprot:Q9UTK0
Length = 388
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKC 74
VAC T D++MQNV+LQ+GL L++ G +I+ + R+++ +C
Sbjct: 218 VACATTDFSMQNVLLQIGLNLVSSDGFKIQNVKRFVL-RC 256
>FB|FBgn0030177 [details] [associations]
symbol:CG2972 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] GO:GO:0022008
EMBL:AE014298 eggNOG:COG1439 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
GeneTree:ENSGT00390000015857 EMBL:AY119594 RefSeq:NP_572603.1
UniGene:Dm.11186 SMR:Q9W2Y4 IntAct:Q9W2Y4 MINT:MINT-874469
STRING:Q9W2Y4 EnsemblMetazoa:FBtr0071430 GeneID:31943
KEGG:dme:Dmel_CG2972 UCSC:CG2972-RA FlyBase:FBgn0030177
InParanoid:Q9W2Y4 OrthoDB:EOG42548K GenomeRNAi:31943 NextBio:776063
Uniprot:Q9W2Y4
Length = 472
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKCLKLFSS 80
VAC+T DYA+QNV+ Q+ L L A G I+QL YI+ +C + +
Sbjct: 291 VACMTTDYALQNVLKQLNLHLAALNGRIIKQLRTYIL-RCYACYKT 335
>WB|WBGene00021843 [details] [associations]
symbol:Y54E10BR.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0008340 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0071688 GO:GO:0040035 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125
GeneTree:ENSGT00390000015857 OMA:TTSVMTK EMBL:FO081636
RefSeq:NP_491090.1 ProteinModelPortal:Q9N3D3 SMR:Q9N3D3
STRING:Q9N3D3 PaxDb:Q9N3D3 EnsemblMetazoa:Y54E10BR.4 GeneID:171874
KEGG:cel:CELE_Y54E10BR.4 UCSC:Y54E10BR.4 CTD:171874
WormBase:Y54E10BR.4 InParanoid:Q9N3D3 NextBio:873055 Uniprot:Q9N3D3
Length = 364
Score = 98 (39.6 bits), Expect = 0.00021, P = 0.00021
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRYIVDKCLKLFSS 80
V C+T D+A+QNV+L M L L++ G +IR+L +++ +C FS+
Sbjct: 196 VGCLTTDFALQNVLLAMNLSLVSLSGYRIRKLKSFVL-RCRTCFST 240
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.140 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 123 123 0.00091 102 3 11 22 0.42 30
29 0.50 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 598 (64 KB)
Total size of DFA: 141 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.97u 0.10s 13.07t Elapsed: 00:00:01
Total cpu time: 12.97u 0.10s 13.07t Elapsed: 00:00:01
Start: Fri May 10 21:22:13 2013 End: Fri May 10 21:22:14 2013