Query 033281
Match_columns 122
No_of_seqs 131 out of 1020
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 19:59:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ex2_A Protein MAF; structural 99.9 2.4E-25 8.1E-30 169.8 10.4 76 38-120 3-78 (189)
2 2amh_A Septum formation protei 99.9 2.8E-25 9.6E-30 171.4 9.5 83 38-120 9-97 (207)
3 2p5x_A ASMTL, N-acetylserotoni 99.9 5.3E-25 1.8E-29 172.1 10.0 83 37-120 3-87 (230)
4 1vp2_A Putative xanthosine tri 95.0 0.2 6.8E-06 38.2 9.3 71 34-119 12-87 (208)
5 1b78_A Pyrophosphatase; struct 93.9 0.25 8.4E-06 37.2 7.7 67 38-119 9-80 (193)
6 2car_A Inosine triphosphate py 93.9 0.32 1.1E-05 36.6 8.3 67 38-119 10-81 (196)
7 3tqu_A Non-canonical purine NT 92.9 0.3 1E-05 37.0 6.7 71 38-118 5-78 (203)
8 1v7r_A Hypothetical protein PH 92.3 0.6 2E-05 34.8 7.7 68 38-119 1-72 (186)
9 1k7k_A Hypothetical protein YG 91.0 1.3 4.4E-05 33.9 8.4 71 39-119 25-98 (221)
10 1gtk_A Porphobilinogen deamina 61.8 5.5 0.00019 32.0 3.0 25 40-64 123-147 (313)
11 3ecr_A Porphobilinogen deamina 57.4 7.1 0.00024 32.1 3.0 25 40-64 144-168 (364)
12 1u6t_A SH3 domain-binding glut 55.3 9.5 0.00033 26.3 3.0 30 39-68 3-41 (121)
13 4glt_A Glutathione S-transfera 53.2 23 0.00079 25.2 5.0 33 37-69 22-57 (225)
14 2kta_A Putative helicase; PSI, 46.2 9.5 0.00032 24.2 1.7 19 43-61 48-66 (74)
15 4a2c_A Galactitol-1-phosphate 42.5 30 0.001 26.2 4.3 29 38-66 186-214 (346)
16 4b4k_A N5-carboxyaminoimidazol 40.8 18 0.00063 26.9 2.8 28 39-66 26-58 (181)
17 4g9b_A Beta-PGM, beta-phosphog 40.3 36 0.0012 24.2 4.3 28 37-64 111-140 (243)
18 1t1v_A SH3BGRL3, SH3 domain-bi 39.7 30 0.001 21.3 3.4 28 39-66 5-41 (93)
19 3op1_A Macrolide-efflux protei 39.3 13 0.00045 29.5 1.9 40 43-84 78-117 (308)
20 4hoj_A REGF protein; GST, glut 38.7 47 0.0016 23.0 4.6 32 37-68 3-37 (210)
21 3msz_A Glutaredoxin 1; alpha-b 31.6 24 0.00081 20.8 1.8 22 48-69 19-40 (89)
22 3lyp_A Stringent starvation pr 31.1 62 0.0021 22.3 4.2 39 28-68 1-42 (215)
23 2lqo_A Putative glutaredoxin R 27.1 37 0.0013 21.6 2.2 19 48-66 19-37 (92)
24 1aba_A Glutaredoxin; electron 26.7 45 0.0015 20.1 2.5 20 47-66 18-37 (87)
25 2x0k_A Riboflavin biosynthesis 26.5 91 0.0031 24.6 4.9 38 44-83 72-109 (338)
26 3ik5_A Protein NEF; protein-pr 25.8 51 0.0017 23.6 2.9 27 45-71 42-94 (143)
27 3h8q_A Thioredoxin reductase 3 24.1 62 0.0021 20.7 2.9 30 39-68 18-52 (114)
28 4g10_A Glutathione S-transfera 23.6 1.4E+02 0.0048 21.7 5.2 33 37-69 6-41 (265)
29 3f6d_A Adgstd4-4, glutathione 23.2 1.2E+02 0.0039 20.8 4.4 31 39-69 2-35 (219)
30 3qav_A RHO-class glutathione S 23.1 1.4E+02 0.0049 21.0 5.0 34 36-69 25-61 (243)
31 3nx4_A Putative oxidoreductase 23.0 49 0.0017 24.7 2.6 32 38-69 172-203 (324)
32 4grd_A N5-CAIR mutase, phospho 22.9 78 0.0027 23.3 3.5 28 39-66 16-48 (173)
33 3trh_A Phosphoribosylaminoimid 21.9 84 0.0029 23.0 3.5 28 39-66 10-42 (169)
34 1lss_A TRK system potassium up 21.7 73 0.0025 20.0 2.9 9 39-47 72-80 (140)
35 3s2e_A Zinc-containing alcohol 21.7 1.1E+02 0.0038 23.0 4.3 26 38-63 191-216 (340)
36 1e6b_A Glutathione S-transfera 21.0 1.6E+02 0.0054 20.2 4.8 32 37-68 8-42 (221)
37 3rg8_A Phosphoribosylaminoimid 20.7 85 0.0029 22.7 3.3 28 39-66 6-38 (159)
38 3vk9_A Glutathione S-transfera 20.6 1.2E+02 0.0042 20.9 4.2 32 38-69 3-37 (216)
39 4hi7_A GI20122; GST, glutathio 20.5 1.6E+02 0.0053 20.5 4.7 31 39-69 5-38 (228)
40 3ir4_A Glutaredoxin 2; glutath 20.4 1.8E+02 0.0062 19.9 5.0 33 37-69 3-38 (218)
No 1
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=99.92 E-value=2.4e-25 Score=169.77 Aligned_cols=76 Identities=32% Similarity=0.365 Sum_probs=70.4
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcceEEEe
Q 033281 38 IKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITADTGLFE 117 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~lGi~FeVi~sdiDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgADTVVv~ 117 (122)
.+|||||+||||++||+++|++|+++++++||+..+.++|.+|+.++|+.||+++.+++. +.+||||||||++
T Consensus 3 ~~lILAS~SPrR~eLL~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~av~~~~~-------~~~VigaDTvV~~ 75 (189)
T 1ex2_A 3 KPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHP-------HAIVIGADTMVCL 75 (189)
T ss_dssp CCEEECCCCHHHHHHHHTTCCCCEECCCCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHCT-------TSEEEEEEEEEEE
T ss_pred CCEEEECCCHHHHHHHHhCCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcC-------CCeEEEeCeEEEE
Confidence 369999999999999999999999999999999888889999999999999999998763 2489999999999
Q ss_pred cce
Q 033281 118 VIS 120 (122)
Q Consensus 118 d~~ 120 (122)
|+.
T Consensus 76 ~g~ 78 (189)
T 1ex2_A 76 DGE 78 (189)
T ss_dssp TTE
T ss_pred CCE
Confidence 975
No 2
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2
Probab=99.92 E-value=2.8e-25 Score=171.39 Aligned_cols=83 Identities=27% Similarity=0.390 Sum_probs=72.1
Q ss_pred CeE-EEccCCHHHHHHHHhc----CCceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCCEEEEc
Q 033281 38 IKI-ILGSSSMARKEILAEM----GYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQ-LNPTTLLITA 111 (122)
Q Consensus 38 ~~i-ILASsSPrR~eLL~~l----Gi~FeVi~sdiDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~-~~~~~lVIgA 111 (122)
++| ||||+||||++||+++ |++|++++++|||+..+.++|.+||.++|+.||+++++++..+.. ...+.+||||
T Consensus 9 ~~l~ILAS~SPrR~eLL~~~~~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA~av~~~~~~~~~~~~~~~~VIga 88 (207)
T 2amh_A 9 IRTMIIGTSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRAADPFELTESIARAKMKAVLEKARQHSPPISGPAIALTF 88 (207)
T ss_dssp CCEEEECCCCHHHHHHHHHHHTTTCSEEEECCCCCCGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTC------CEEEEEE
T ss_pred CcEEEEccCCHHHHHHHHhhhhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCCCEEEEE
Confidence 689 9999999999999999 999999999999998888899999999999999999998742110 0114699999
Q ss_pred ceEEEecce
Q 033281 112 DTGLFEVIS 120 (122)
Q Consensus 112 DTVVv~d~~ 120 (122)
||||++|+.
T Consensus 89 DTvV~~~g~ 97 (207)
T 2amh_A 89 DQVVVKGDE 97 (207)
T ss_dssp EEEEEETTE
T ss_pred CeEEEECCE
Confidence 999999974
No 3
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=99.92 E-value=5.3e-25 Score=172.15 Aligned_cols=83 Identities=30% Similarity=0.358 Sum_probs=72.5
Q ss_pred CCeEEEccCCHHHHHHHHhcCCceEEEeCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcceE
Q 033281 37 PIKIILGSSSMARKEILAEMGYEFTVVTAEIDEKSIRKD--KPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITADTG 114 (122)
Q Consensus 37 ~~~iILASsSPrR~eLL~~lGi~FeVi~sdiDE~~~~~~--~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgADTV 114 (122)
+++|||||+||||++||+++|++|++++++|||+..+.+ +|.+||.++|+.||+++++++.... ..++.+|||||||
T Consensus 3 ~~~lILAS~SPrR~eLL~~~Gi~f~v~~~~iDE~~~~~~~~~p~~~v~~lA~~KA~av~~~~~~~~-~~~~~~VIgaDTv 81 (230)
T 2p5x_A 3 HKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKD-LRAPDVVIGADTI 81 (230)
T ss_dssp TSCEEECCCCHHHHHHHHHTTCCCEECCCCCCCCCCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHH-SCCCSEEEEEEEE
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEeCCCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCEEEEeCeE
Confidence 468999999999999999999999999999999988776 8999999999999999998864210 0135699999999
Q ss_pred EEecce
Q 033281 115 LFEVIS 120 (122)
Q Consensus 115 Vv~d~~ 120 (122)
|++|+.
T Consensus 82 V~~dg~ 87 (230)
T 2p5x_A 82 VTVGGL 87 (230)
T ss_dssp EEETTE
T ss_pred EEECCE
Confidence 999974
No 4
>1vp2_A Putative xanthosine triphosphate pyrophosphatase/ protein homolog; structural genomics, joint center for structural genomics, JCSG; 1.78A {Thermotoga maritima} SCOP: c.51.4.1
Probab=94.96 E-value=0.2 Score=38.22 Aligned_cols=71 Identities=13% Similarity=0.185 Sum_probs=49.0
Q ss_pred CCCCCeEEEccCCHHHHHHHHh-cCCceEEEeCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEE
Q 033281 34 ESSPIKIILGSSSMARKEILAE-MGYEFTVVTAE----IDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLL 108 (122)
Q Consensus 34 ~~~~~~iILASsSPrR~eLL~~-lGi~FeVi~sd----iDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lV 108 (122)
+|++++|||||+-+-..+-++. |+-.+++++.+ ++|+- .+ ....|..||+.+++... .++
T Consensus 12 ~~~~~~iv~aT~N~~Kl~E~~~iL~~~iev~~~~~~~ei~E~g---~T----f~eNA~~KA~~aa~~~g--------~pv 76 (208)
T 1vp2_A 12 HMKKLTVYLATTNPHKVEEIKMIAPEWMEILPSPEKIEVVEDG---ET----FLENSVKKAVVYGKKLK--------HPV 76 (208)
T ss_dssp ---CEEEEESCCCHHHHHHHHTTCCTTEEEEECSSCCCCCCCC---SS----HHHHHHHHHHHHHHHHC--------SCE
T ss_pred hcccCeEEEEcCCHHHHHHHHHHhhcCcEEEecccCCCCCCCC---CC----HHHHHHHHHHHHHHHHC--------CCE
Confidence 4778899999999998888877 44227887733 33321 12 34578899999988753 469
Q ss_pred EEcceEEEecc
Q 033281 109 ITADTGLFEVI 119 (122)
Q Consensus 109 IgADTVVv~d~ 119 (122)
|+=||=..+|-
T Consensus 77 laDDSGL~VdA 87 (208)
T 1vp2_A 77 MADDSGLVIYS 87 (208)
T ss_dssp EEEEEEEEEGG
T ss_pred EeeccEEEEec
Confidence 99999888763
No 5
>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanocaldococcus jannaschii} SCOP: c.51.4.1 PDB: 2mjp_A*
Probab=93.93 E-value=0.25 Score=37.19 Aligned_cols=67 Identities=18% Similarity=0.211 Sum_probs=44.3
Q ss_pred CeEEEccCCHHHHHHHHh-c---C-CceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcc
Q 033281 38 IKIILGSSSMARKEILAE-M---G-YEFTVVTAEIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITAD 112 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~-l---G-i~FeVi~sdiDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgAD 112 (122)
++|+|||+-+-..+-++. | | +++.....+++|.. .-....|..||+.+++... .++|+=|
T Consensus 9 m~iv~aT~N~~K~~E~~~iL~~~~~i~v~~~~~~~~E~~-------~tf~enA~~KA~~a~~~~g--------~p~laDD 73 (193)
T 1b78_A 9 MKIYFATGNPNKIKEANIILKDLKDVEIEQIKISYPEIQ-------GTLEEVAEFGAKWVYNILK--------KPVIVED 73 (193)
T ss_dssp -CEEEECSCHHHHHHHHHHTTTCTTCCEEEECCCCCCBS-------SCHHHHHHHHHHHHHHHHC--------SCEEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHhcccCCeEEEECCCCCCCCC-------CCHHHHHHHHHHHHHHHHC--------CCEEEEc
Confidence 579999999988665554 3 3 44433333333332 2245578999999988763 4699999
Q ss_pred eEEEecc
Q 033281 113 TGLFEVI 119 (122)
Q Consensus 113 TVVv~d~ 119 (122)
|=..+|.
T Consensus 74 SGL~vdA 80 (193)
T 1b78_A 74 SGFFVEA 80 (193)
T ss_dssp EEEEEGG
T ss_pred CEEEEhh
Confidence 9887763
No 6
>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} SCOP: c.51.4.1 PDB: 2j4e_A* 2i5d_A
Probab=93.91 E-value=0.32 Score=36.62 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=46.6
Q ss_pred CeEEEccCCHHHHHHHHh-cC--CceEEEe--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcc
Q 033281 38 IKIILGSSSMARKEILAE-MG--YEFTVVT--AEIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITAD 112 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~-lG--i~FeVi~--sdiDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgAD 112 (122)
++|+|||+-+-..+-++. |+ +.+++++ .+++|.. .+ ....|..||+.+++... .++|+=|
T Consensus 10 ~~iv~aT~N~~K~~E~~~iL~~~~~i~v~~~~~~~~E~~---~t----f~enA~~KA~~a~~~~g--------~pvlaDD 74 (196)
T 2car_A 10 KKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQ---GE----PDEISIQKCQEAVRQVQ--------GPVLVED 74 (196)
T ss_dssp CEEEEECSCHHHHHHHHHHHCTTCCSEEEEECCCCCCBC---SC----HHHHHHHHHHHHHHHHS--------SCEEEEE
T ss_pred ceEEEEcCCHHHHHHHHHHcCCCCCcEEEECCCCCCCCC---CC----HHHHHHHHHHHHHHHHC--------CCEEeec
Confidence 579999999987665555 33 3455555 4455543 23 34578999999988763 4699999
Q ss_pred eEEEecc
Q 033281 113 TGLFEVI 119 (122)
Q Consensus 113 TVVv~d~ 119 (122)
|=..+|-
T Consensus 75 SGL~vdA 81 (196)
T 2car_A 75 TCLCFNA 81 (196)
T ss_dssp EEEEEGG
T ss_pred cEEEEec
Confidence 9887763
No 7
>3tqu_A Non-canonical purine NTP pyrophosphatase; HAM1 protein, hydrolase; HET: MSE; 1.90A {Coxiella burnetii}
Probab=92.88 E-value=0.3 Score=36.96 Aligned_cols=71 Identities=18% Similarity=0.246 Sum_probs=46.7
Q ss_pred CeEEEccCCHHHHHHHHh-cC-CceEEEe-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcceE
Q 033281 38 IKIILGSSSMARKEILAE-MG-YEFTVVT-AEIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITADTG 114 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~-lG-i~FeVi~-sdiDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgADTV 114 (122)
++|||||+-+-..+-++. |+ +.+++++ .+++-..+. ++- .-....|..||+.+++... .++|+=||=
T Consensus 5 ~~iv~aT~N~~K~~E~~~iL~~~~i~v~~~~~~~~~ei~-E~g-~tf~eNA~~KA~~~~~~~g--------~pvlaDDSG 74 (203)
T 3tqu_A 5 LEIVLASQNSSKLAEMQELLRDLEIKFIPQTEFSVPDIE-ETG-STFVENAIIKARHAAKQTG--------LPALADDSG 74 (203)
T ss_dssp EEEEECCCCHHHHHHHHHHTTTSSEEEEEGGGGTCCCCC-CCC-SSHHHHHHHHHHHHHHHHS--------SCEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHhhhcCcEEEEhhhcCCCCCC-CCC-CCHHHHHHHHHHHHHHHHC--------cCEEEeccE
Confidence 479999999987665555 43 3577775 344311111 111 1234578899999988763 569999998
Q ss_pred EEec
Q 033281 115 LFEV 118 (122)
Q Consensus 115 Vv~d 118 (122)
..+|
T Consensus 75 L~vd 78 (203)
T 3tqu_A 75 LTIA 78 (203)
T ss_dssp EEEG
T ss_pred EEEh
Confidence 8876
No 8
>1v7r_A Hypothetical protein PH1917; ntpase, structural genomics, riken structural genomics/prote initiative, RSGI, hydrolase; HET: CIT; 1.40A {Pyrococcus horikoshii} SCOP: c.51.4.1 PDB: 2dvn_A* 2dvo_A* 2dvp_A 2ehk_A 2zti_A 2e5x_A*
Probab=92.33 E-value=0.6 Score=34.84 Aligned_cols=68 Identities=18% Similarity=0.323 Sum_probs=44.2
Q ss_pred CeEEEccCCHHHHH----HHHhcCCceEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcce
Q 033281 38 IKIILGSSSMARKE----ILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITADT 113 (122)
Q Consensus 38 ~~iILASsSPrR~e----LL~~lGi~FeVi~sdiDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgADT 113 (122)
++|+|||+-+-..+ ||..+|+ ++++.+++-..+++.+ ....|..||+.+++... .++|+=||
T Consensus 1 mkiv~aT~N~~K~~E~~~il~~~~i--~v~~~~~~~~e~~g~t----f~enA~~KA~~~~~~~g--------~p~laDDS 66 (186)
T 1v7r_A 1 MKIFFITSNPGKVREVANFLGTFGI--EIVQLKHEYPEIQAEK----LEDVVDFGISWLKGKVP--------EPFMIEDS 66 (186)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTC--EEEEECCCCCCCCCSS----HHHHHHHHHHHHTTTSC--------SSEEEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHhhhcCc--EEEECCCCCCCCCCCC----HHHHHHHHHHHHHHHHC--------CCeEecCc
Confidence 36999999988764 4544554 5555444322222223 44578899999977643 46999999
Q ss_pred EEEecc
Q 033281 114 GLFEVI 119 (122)
Q Consensus 114 VVv~d~ 119 (122)
=..+|-
T Consensus 67 GL~vdA 72 (186)
T 1v7r_A 67 GLFIES 72 (186)
T ss_dssp EEEEGG
T ss_pred EEEEee
Confidence 887763
No 9
>1k7k_A Hypothetical protein YGGV; MAD, His-TAG, large groove, disordered Se-Met, structural genomics, putative ribosomal protein, PSI; HET: MSE; 1.50A {Escherichia coli} SCOP: c.51.4.1 PDB: 2q16_A* 2pyu_A*
Probab=90.99 E-value=1.3 Score=33.95 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=46.0
Q ss_pred eEEEccCCHHHHHHHHh-cC-CceEEEeC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEcceEE
Q 033281 39 KIILGSSSMARKEILAE-MG-YEFTVVTA-EIDEKSIRKDKPEDLVMALAEAKAEAIRSRLQSAGQLNPTTLLITADTGL 115 (122)
Q Consensus 39 ~iILASsSPrR~eLL~~-lG-i~FeVi~s-diDE~~~~~~~p~d~v~~lA~~KA~av~~~l~~~~~~~~~~lVIgADTVV 115 (122)
+|||||+-+-..+-++. |+ +.+++++. +++-..++. +-. -....|..||+++++... .++|+=||=.
T Consensus 25 ~iv~AT~N~~Kl~E~~~iL~~~~iev~~~~d~~~~ei~E-~g~-Tf~eNA~~KA~~aa~~~g--------~pvlaDDSGL 94 (221)
T 1k7k_A 25 KVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEE-TGL-TFIENAILKARHAAKVTA--------LPAIADDSGL 94 (221)
T ss_dssp EEEESCCCHHHHHHHHHHHGGGTEEEEETTTTTCCCCCC-CCS-SHHHHHHHHHHHHHHHHS--------SCEEEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHhhhcCeEEEEhhhcCCCCccc-CCC-CHHHHHHHHHHHHHHHHC--------CCEEeeccEE
Confidence 79999999987655444 32 24777764 353321221 111 234578899999988763 4699999988
Q ss_pred Eecc
Q 033281 116 FEVI 119 (122)
Q Consensus 116 v~d~ 119 (122)
.+|.
T Consensus 95 ~VdA 98 (221)
T 1k7k_A 95 AVDV 98 (221)
T ss_dssp EEGG
T ss_pred EEee
Confidence 8763
No 10
>1gtk_A Porphobilinogen deaminase; lyase, biosynthesis of linear tetrapyrrole, all alpha/beta; HET: DPM; 1.66A {Escherichia coli} SCOP: c.94.1.1 d.50.2.1 PDB: 1ah5_A* 2ypn_A* 1ypn_A* 1pda_A*
Probab=61.76 E-value=5.5 Score=32.01 Aligned_cols=25 Identities=32% Similarity=0.413 Sum_probs=22.1
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEe
Q 033281 40 IILGSSSMARKEILAEMGYEFTVVT 64 (122)
Q Consensus 40 iILASsSPrR~eLL~~lGi~FeVi~ 64 (122)
-+.|++|+||+..|+.+..+.++++
T Consensus 123 a~VGTSSlRR~aQL~~~rPdl~i~~ 147 (313)
T 1gtk_A 123 SIVGTSSLRRQCQLAERRPDLIIRS 147 (313)
T ss_dssp CEEECCCHHHHHHHHHHCTTSEEEC
T ss_pred CEEecCCHHHHHHHHHHCCCCEEEe
Confidence 5889999999999999988877775
No 11
>3ecr_A Porphobilinogen deaminase; heme biosynthesis, porphobilinogen hinge, alternative splicing, cytoplasm, disease mutation, porphyrin biosynthesis; HET: DPM; 2.18A {Homo sapiens} PDB: 3eq1_A*
Probab=57.44 E-value=7.1 Score=32.07 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=22.1
Q ss_pred EEEccCCHHHHHHHHhcCCceEEEe
Q 033281 40 IILGSSSMARKEILAEMGYEFTVVT 64 (122)
Q Consensus 40 iILASsSPrR~eLL~~lGi~FeVi~ 64 (122)
-+.+++|+||+..|+.+..+.++++
T Consensus 144 a~VGTSSlRR~aQL~~~rPdL~i~~ 168 (364)
T 3ecr_A 144 SVVGTSSLRRAAQLQRKFPHLEFRS 168 (364)
T ss_dssp CEEECCCHHHHHHHHHHCTTSEEEC
T ss_pred CEEeCCcHHHHHHHHHHCCCCEEEE
Confidence 5789999999999999988887775
No 12
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=55.26 E-value=9.5 Score=26.29 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=23.9
Q ss_pred eEEEccCCHHH---------HHHHHhcCCceEEEeCCCC
Q 033281 39 KIILGSSSMAR---------KEILAEMGYEFTVVTAEID 68 (122)
Q Consensus 39 ~iILASsSPrR---------~eLL~~lGi~FeVi~sdiD 68 (122)
.|...|.+|.+ +.||+..||+|+.+..+-|
T Consensus 3 ~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~d 41 (121)
T 1u6t_A 3 RVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAAN 41 (121)
T ss_dssp EEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred EEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECCCC
Confidence 57778888887 6899999999988766543
No 13
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=53.24 E-value=23 Score=25.17 Aligned_cols=33 Identities=15% Similarity=0.302 Sum_probs=24.7
Q ss_pred CCeEEEccCCH--HHHHH-HHhcCCceEEEeCCCCC
Q 033281 37 PIKIILGSSSM--ARKEI-LAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 37 ~~~iILASsSP--rR~eL-L~~lGi~FeVi~sdiDE 69 (122)
.|+++-...|| ||..+ |...||+|+.+..+..+
T Consensus 22 ~MKLy~~~~SP~~~rVr~~L~e~gi~~e~~~v~~~~ 57 (225)
T 4glt_A 22 SMKLLYSNTSPYARKVRVVAAEKRIDVDMVLVVLAD 57 (225)
T ss_dssp CCEEEECSSCHHHHHHHHHHHHHTCCCEEEECCTTC
T ss_pred CceEecCCCCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 37899999998 44444 55699999988877643
No 14
>2kta_A Putative helicase; PSI, NESG, GFT ATP-binding, nucleotide-binding, structu genomics, protein structure initiative; NMR {Bacteroides vulgatus}
Probab=46.17 E-value=9.5 Score=24.22 Aligned_cols=19 Identities=21% Similarity=0.566 Sum_probs=15.8
Q ss_pred ccCCHHHHHHHHhcCCceE
Q 033281 43 GSSSMARKEILAEMGYEFT 61 (122)
Q Consensus 43 ASsSPrR~eLL~~lGi~Fe 61 (122)
+.=|+.|.++|+.+|+.|.
T Consensus 48 g~Ls~eRi~~L~~lGf~w~ 66 (74)
T 2kta_A 48 GKLPNDRRLLLDKIGFVWS 66 (74)
T ss_dssp TCCCHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHcCCEec
Confidence 3458999999999999764
No 15
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=42.46 E-value=30 Score=26.18 Aligned_cols=29 Identities=14% Similarity=0.052 Sum_probs=24.1
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEeCC
Q 033281 38 IKIILGSSSMARKEILAEMGYEFTVVTAE 66 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~lGi~FeVi~sd 66 (122)
..+|..+.|+.|.++++++|.+..+...+
T Consensus 186 ~~vi~~~~~~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 186 KSVTAIDISSEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp SEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred cEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence 46889999999999999999887665543
No 16
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.77 E-value=18 Score=26.88 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=23.0
Q ss_pred eEEEccCCHHH-----HHHHHhcCCceEEEeCC
Q 033281 39 KIILGSSSMAR-----KEILAEMGYEFTVVTAE 66 (122)
Q Consensus 39 ~iILASsSPrR-----~eLL~~lGi~FeVi~sd 66 (122)
-||.||.|-+- .++|+.+||+|++....
T Consensus 26 ~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~S 58 (181)
T 4b4k_A 26 GVIMGSTSDWETMKYACDILDELNIPYEKKVVS 58 (181)
T ss_dssp EEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEc
Confidence 48999999765 47999999999877654
No 17
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=40.29 E-value=36 Score=24.23 Aligned_cols=28 Identities=32% Similarity=0.413 Sum_probs=23.0
Q ss_pred CCeEEEccCCHHHHHHHHhcCCc--eEEEe
Q 033281 37 PIKIILGSSSMARKEILAEMGYE--FTVVT 64 (122)
Q Consensus 37 ~~~iILASsSPrR~eLL~~lGi~--FeVi~ 64 (122)
..++.+.|+|++...+|+.+|+. |..+.
T Consensus 111 g~~i~i~t~~~~~~~~l~~~gl~~~fd~i~ 140 (243)
T 4g9b_A 111 QISVGLASVSLNAPTILAALELREFFTFCA 140 (243)
T ss_dssp TCEEEECCCCTTHHHHHHHTTCGGGCSEEC
T ss_pred cccceecccccchhhhhhhhhhcccccccc
Confidence 46899999999999999999994 55444
No 18
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=39.69 E-value=30 Score=21.31 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=19.2
Q ss_pred eEEEccCCHHH---------HHHHHhcCCceEEEeCC
Q 033281 39 KIILGSSSMAR---------KEILAEMGYEFTVVTAE 66 (122)
Q Consensus 39 ~iILASsSPrR---------~eLL~~lGi~FeVi~sd 66 (122)
.|+-.|..|.+ +++|+..|++|+.+..+
T Consensus 5 ~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~ 41 (93)
T 1t1v_A 5 RVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDIS 41 (93)
T ss_dssp EEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETT
T ss_pred EEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECC
Confidence 34445555555 57899999999877554
No 19
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=39.30 E-value=13 Score=29.46 Aligned_cols=40 Identities=10% Similarity=0.109 Sum_probs=29.2
Q ss_pred ccCCHHHHHHHHhcCCceEEEeCCCCCCCCCCCCHHHHHHHH
Q 033281 43 GSSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMAL 84 (122)
Q Consensus 43 ASsSPrR~eLL~~lGi~FeVi~sdiDE~~~~~~~p~d~v~~l 84 (122)
=++-..|.++|+.+|++.-++ .+|+++ ....+|++++..+
T Consensus 78 Lt~~~eK~~ll~~lGVD~v~~-~~F~~~-~a~ls~e~Fv~~l 117 (308)
T 3op1_A 78 ILNPAERERKLKREGVEELYL-LDFSSQ-FASLTAQEFFATY 117 (308)
T ss_dssp SSCHHHHHHHHHHHTCCEEEE-ECCCHH-HHTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEE-ecCCHH-HHcCCHHHHHHHH
Confidence 355688999999999876543 567765 3456899988754
No 20
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=38.67 E-value=47 Score=22.98 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=23.6
Q ss_pred CCeEEEccCCH--HHHH-HHHhcCCceEEEeCCCC
Q 033281 37 PIKIILGSSSM--ARKE-ILAEMGYEFTVVTAEID 68 (122)
Q Consensus 37 ~~~iILASsSP--rR~e-LL~~lGi~FeVi~sdiD 68 (122)
.++++-...|| +|.. +|+..|++|+.+..|..
T Consensus 3 Mm~LY~~~~sP~~~rvr~~L~e~gi~~e~~~v~~~ 37 (210)
T 4hoj_A 3 MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDIDIY 37 (210)
T ss_dssp -CEEEECTTCHHHHHHHHHHHHHTCCCEEEECCTT
T ss_pred eEEEecCCCChHHHHHHHHHHHcCCCCEEEEeCCC
Confidence 36788888887 4544 46679999999987764
No 21
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=31.64 E-value=24 Score=20.85 Aligned_cols=22 Identities=14% Similarity=0.030 Sum_probs=16.6
Q ss_pred HHHHHHHhcCCceEEEeCCCCC
Q 033281 48 ARKEILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 48 rR~eLL~~lGi~FeVi~sdiDE 69 (122)
+=+.+|+.+|++|+.+..|+++
T Consensus 19 ~~~~~L~~~~i~~~~~~vd~~~ 40 (89)
T 3msz_A 19 WAKQWFEENNIAFDETIIDDYA 40 (89)
T ss_dssp HHHHHHHHTTCCCEEEECCSHH
T ss_pred HHHHHHHHcCCCceEEEeecCC
Confidence 3456888899999988776654
No 22
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=31.14 E-value=62 Score=22.33 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=21.7
Q ss_pred cccccCCCCCCeEEEccCCH--HHHH-HHHhcCCceEEEeCCCC
Q 033281 28 RGMARSESSPIKIILGSSSM--ARKE-ILAEMGYEFTVVTAEID 68 (122)
Q Consensus 28 ~~~~~~~~~~~~iILASsSP--rR~e-LL~~lGi~FeVi~sdiD 68 (122)
|+|+.. ++++++-...|| +|.. +|+..|++|+.+..+..
T Consensus 1 Msm~~~--~~~~Ly~~~~s~~~~~v~~~L~~~gi~~e~~~v~~~ 42 (215)
T 3lyp_A 1 MSLGVT--NRLACYSDPADHYSHRVRIVLAEKGVSAEIISVEAG 42 (215)
T ss_dssp ---------CCEEEECTTCHHHHHHHHHHHHHTCCCEEEECC--
T ss_pred CCCCCC--CCeEEEeCCCCchHHHHHHHHHHCCCCcEEEecCcc
Confidence 345543 246777777776 4444 45569999999887765
No 23
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=27.11 E-value=37 Score=21.65 Aligned_cols=19 Identities=21% Similarity=0.170 Sum_probs=15.0
Q ss_pred HHHHHHHhcCCceEEEeCC
Q 033281 48 ARKEILAEMGYEFTVVTAE 66 (122)
Q Consensus 48 rR~eLL~~lGi~FeVi~sd 66 (122)
+=+++|++.||+|+.+..+
T Consensus 19 ~aK~~L~~~gi~y~~idi~ 37 (92)
T 2lqo_A 19 RLKTALTANRIAYDEVDIE 37 (92)
T ss_dssp HHHHHHHHTTCCCEEEETT
T ss_pred HHHHHHHhcCCceEEEEcC
Confidence 4578999999999876543
No 24
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=26.71 E-value=45 Score=20.08 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=15.8
Q ss_pred HHHHHHHHhcCCceEEEeCC
Q 033281 47 MARKEILAEMGYEFTVVTAE 66 (122)
Q Consensus 47 PrR~eLL~~lGi~FeVi~sd 66 (122)
.+=+++|+..|++|+.+..+
T Consensus 18 ~~ak~~L~~~gi~y~~idI~ 37 (87)
T 1aba_A 18 DNAKRLLTVKKQPFEFINIM 37 (87)
T ss_dssp HHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHcCCCEEEEEee
Confidence 44578999999999987654
No 25
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=26.49 E-value=91 Score=24.64 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=27.4
Q ss_pred cCCHHHHHHHHhcCCceEEEeCCCCCCCCCCCCHHHHHHH
Q 033281 44 SSSMARKEILAEMGYEFTVVTAEIDEKSIRKDKPEDLVMA 83 (122)
Q Consensus 44 SsSPrR~eLL~~lGi~FeVi~sdiDE~~~~~~~p~d~v~~ 83 (122)
..-..|.++|+.+|++..++ .+|++.. ...+|++++..
T Consensus 72 ~~~~eR~~ll~~~gVD~v~v-~~F~~~~-a~ls~e~Fi~~ 109 (338)
T 2x0k_A 72 TTLAERFALAESFGIDGVLV-IDFTREL-SGTSPEKYVEF 109 (338)
T ss_dssp SCHHHHHHHHHHTTCSEEEE-ECTTTSS-SSCCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEE-ccccHHH-HhCCHHHHHHH
Confidence 34578999999999987544 4577764 45678887764
No 26
>3ik5_A Protein NEF; protein-protein complex, cell membrane, lipoprotein, membran myristate; 2.05A {Simian immunodeficiency virus} SCOP: d.102.1.0 PDB: 3ioz_A
Probab=25.85 E-value=51 Score=23.62 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=17.0
Q ss_pred CCHHHHHHHHhc--------------------------CCceEEEeCCCCCCC
Q 033281 45 SSMARKEILAEM--------------------------GYEFTVVTAEIDEKS 71 (122)
Q Consensus 45 sSPrR~eLL~~l--------------------------Gi~FeVi~sdiDE~~ 71 (122)
-|++|++||..- |+=|..+|.+.+|+.
T Consensus 42 yS~kR~~ILdl~~y~~qG~~pdWqnYT~GPG~RyPltFGWcfkLvPV~~~eea 94 (143)
T 3ik5_A 42 YSARRHRILDIYLEKEEGIIPDWQDYTSGPGIRYPKTFGWLWKLVPVNVSDEA 94 (143)
T ss_dssp CCHHHHHHHHHHHHHTTCBCSCCCCBCCCSSSBCBSSTTCCEEEEEC------
T ss_pred eccchhhcceeEEEeeccccCCcceeCCCCCccccccCceeEEEeECCcCccc
Confidence 389999999752 666899998888753
No 27
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=24.05 E-value=62 Score=20.69 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=21.1
Q ss_pred eEEEccCC-----HHHHHHHHhcCCceEEEeCCCC
Q 033281 39 KIILGSSS-----MARKEILAEMGYEFTVVTAEID 68 (122)
Q Consensus 39 ~iILASsS-----PrR~eLL~~lGi~FeVi~sdiD 68 (122)
+|++=|++ .+=+++|+.+|++|+.+..+.+
T Consensus 18 ~v~vy~~~~Cp~C~~ak~~L~~~~i~~~~~dvd~~ 52 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQV 52 (114)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTS
T ss_pred CEEEEEcCCCCcHHHHHHHHHHcCCCcEEEEecCC
Confidence 45554443 4567899999999988876643
No 28
>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}
Probab=23.61 E-value=1.4e+02 Score=21.74 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=24.2
Q ss_pred CCeEEEccCCHH--HHH-HHHhcCCceEEEeCCCCC
Q 033281 37 PIKIILGSSSMA--RKE-ILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 37 ~~~iILASsSPr--R~e-LL~~lGi~FeVi~sdiDE 69 (122)
.++|.-...||. |.. +|+..||+|+.+..|+.+
T Consensus 6 ~~~LY~~~~sP~~~rv~i~L~e~gi~ye~~~vd~~~ 41 (265)
T 4g10_A 6 ELTIYHIPGCPFSERVEIMLELKGLRMKDVEIDISK 41 (265)
T ss_dssp CCEEEECTTCHHHHHHHHHHHHHTCCCEEEECCTTS
T ss_pred ceEEEecCCChHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 367887888874 544 456699999999887654
No 29
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=23.18 E-value=1.2e+02 Score=20.84 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=22.2
Q ss_pred eEEEccCCH--HHHH-HHHhcCCceEEEeCCCCC
Q 033281 39 KIILGSSSM--ARKE-ILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 39 ~iILASsSP--rR~e-LL~~lGi~FeVi~sdiDE 69 (122)
++.-...|| +|.. +|+..|++|+.+..+...
T Consensus 2 ~Ly~~~~s~~~~~v~~~L~~~gi~ye~~~v~~~~ 35 (219)
T 3f6d_A 2 DFYYLPGSAPCRAVQMTAAAVGVELNLKLTNLMA 35 (219)
T ss_dssp EEEECTTCHHHHHHHHHHHHHTCCCEEEECCTTT
T ss_pred EEEeCCCCCchHHHHHHHHHcCCCceEEEccCcc
Confidence 455566677 4544 577899999999887654
No 30
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*
Probab=23.09 E-value=1.4e+02 Score=20.98 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=24.6
Q ss_pred CCCeEEEccCCH-HH-H-HHHHhcCCceEEEeCCCCC
Q 033281 36 SPIKIILGSSSM-AR-K-EILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 36 ~~~~iILASsSP-rR-~-eLL~~lGi~FeVi~sdiDE 69 (122)
++++++-...|| .| . -+|+..|++|+.+..+++.
T Consensus 25 ~~~~Ly~~~~sp~~~rv~~~L~~~gi~ye~~~v~~~~ 61 (243)
T 3qav_A 25 SKPFVYWGSGSPPCWKVLLVLQEKKIDYDEKIISFSK 61 (243)
T ss_dssp CCCEEEECTTCHHHHHHHHHHHHTTCCCEEEECCTTT
T ss_pred CccEEEeCCCCcchHHHHHHHHHcCCCceEEEecCcc
Confidence 347888888897 33 2 3566699999998877653
No 31
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=23.01 E-value=49 Score=24.72 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=25.5
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEEeCCCCC
Q 033281 38 IKIILGSSSMARKEILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~lGi~FeVi~sdiDE 69 (122)
.++|.-..|+.|+++++++|.+..+...+.++
T Consensus 172 a~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~ 203 (324)
T 3nx4_A 172 YQVAAVSGRESTHGYLKSLGANRILSRDEFAE 203 (324)
T ss_dssp CCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC
T ss_pred CEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH
Confidence 36888888999999999999887766655544
No 32
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=22.89 E-value=78 Score=23.26 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=23.2
Q ss_pred eEEEccCCHHH-----HHHHHhcCCceEEEeCC
Q 033281 39 KIILGSSSMAR-----KEILAEMGYEFTVVTAE 66 (122)
Q Consensus 39 ~iILASsSPrR-----~eLL~~lGi~FeVi~sd 66 (122)
-||.||.|-+. .++|+.+|++|++....
T Consensus 16 ~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~s 48 (173)
T 4grd_A 16 GVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVS 48 (173)
T ss_dssp EEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEc
Confidence 59999999765 57899999999877654
No 33
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.94 E-value=84 Score=22.98 Aligned_cols=28 Identities=25% Similarity=0.306 Sum_probs=22.5
Q ss_pred eEEEccCCHHH-----HHHHHhcCCceEEEeCC
Q 033281 39 KIILGSSSMAR-----KEILAEMGYEFTVVTAE 66 (122)
Q Consensus 39 ~iILASsSPrR-----~eLL~~lGi~FeVi~sd 66 (122)
-||.||.|-.- .++|+.+|++|++....
T Consensus 10 ~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~S 42 (169)
T 3trh_A 10 AILMGSDSDLSTMETAFTELKSLGIPFEAHILS 42 (169)
T ss_dssp EEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEc
Confidence 48999999654 47899999999877654
No 34
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=21.73 E-value=73 Score=20.05 Aligned_cols=9 Identities=11% Similarity=-0.093 Sum_probs=4.3
Q ss_pred eEEEccCCH
Q 033281 39 KIILGSSSM 47 (122)
Q Consensus 39 ~iILASsSP 47 (122)
-+|++..++
T Consensus 72 ~vi~~~~~~ 80 (140)
T 1lss_A 72 MYIAVTGKE 80 (140)
T ss_dssp EEEECCSCH
T ss_pred EEEEeeCCc
Confidence 345554444
No 35
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=21.66 E-value=1.1e+02 Score=23.02 Aligned_cols=26 Identities=15% Similarity=0.226 Sum_probs=21.8
Q ss_pred CeEEEccCCHHHHHHHHhcCCceEEE
Q 033281 38 IKIILGSSSMARKEILAEMGYEFTVV 63 (122)
Q Consensus 38 ~~iILASsSPrR~eLL~~lGi~FeVi 63 (122)
.++|....|+.|.++++++|.+..+.
T Consensus 191 a~Vi~~~~~~~~~~~~~~lGa~~~i~ 216 (340)
T 3s2e_A 191 LRVAAVDIDDAKLNLARRLGAEVAVN 216 (340)
T ss_dssp CEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CeEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 47888889999999999999876543
No 36
>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5
Probab=20.99 E-value=1.6e+02 Score=20.21 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=21.7
Q ss_pred CCeEEEccCCH--HHHH-HHHhcCCceEEEeCCCC
Q 033281 37 PIKIILGSSSM--ARKE-ILAEMGYEFTVVTAEID 68 (122)
Q Consensus 37 ~~~iILASsSP--rR~e-LL~~lGi~FeVi~sdiD 68 (122)
.++++-...|| +|.. +|+..|++|+.+..++.
T Consensus 8 ~~~Ly~~~~s~~~~~v~~~L~~~gi~~e~~~v~~~ 42 (221)
T 1e6b_A 8 KLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLL 42 (221)
T ss_dssp CCEEEECTTCHHHHHHHHHHHHTTCCCEEEECCTT
T ss_pred CeEEEecCCCCchHHHHHHHHHcCCCCEEEEecCC
Confidence 35666555666 3444 46669999999887764
No 37
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=20.71 E-value=85 Score=22.67 Aligned_cols=28 Identities=29% Similarity=0.413 Sum_probs=22.2
Q ss_pred eEEEccCCHHH-----HHHHHhcCCceEEEeCC
Q 033281 39 KIILGSSSMAR-----KEILAEMGYEFTVVTAE 66 (122)
Q Consensus 39 ~iILASsSPrR-----~eLL~~lGi~FeVi~sd 66 (122)
-||.||.|-.- .++|+.+|++|++-...
T Consensus 6 ~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~s 38 (159)
T 3rg8_A 6 IILMGSSSDMGHAEKIASELKTFGIEYAIRIGS 38 (159)
T ss_dssp EEEESSGGGHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEc
Confidence 48899999654 47899999999877654
No 38
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=20.64 E-value=1.2e+02 Score=20.92 Aligned_cols=32 Identities=6% Similarity=0.101 Sum_probs=23.4
Q ss_pred CeEEEccCCH--HHHH-HHHhcCCceEEEeCCCCC
Q 033281 38 IKIILGSSSM--ARKE-ILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 38 ~~iILASsSP--rR~e-LL~~lGi~FeVi~sdiDE 69 (122)
+++.-...|| ||.. +|+..|++|+.+..|+..
T Consensus 3 mkLY~~~~S~~~~~v~~~l~~~gi~~e~~~v~~~~ 37 (216)
T 3vk9_A 3 IDLYYVPGSAPCRAVLLTAKALNLNLNLKLVDLHH 37 (216)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCCEEEECCGGG
T ss_pred EEEEeCCCChhHHHHHHHHHHcCCCCEEEEeCCCC
Confidence 5777777787 4443 467799999998877643
No 39
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=20.48 E-value=1.6e+02 Score=20.46 Aligned_cols=31 Identities=10% Similarity=0.016 Sum_probs=21.4
Q ss_pred eEEEccCCH--HHHH-HHHhcCCceEEEeCCCCC
Q 033281 39 KIILGSSSM--ARKE-ILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 39 ~iILASsSP--rR~e-LL~~lGi~FeVi~sdiDE 69 (122)
.|.-...|| ||.. +|+..|++|+.+..|+..
T Consensus 5 iLY~~~~Sp~~~~vr~~L~~~gi~ye~~~v~~~~ 38 (228)
T 4hi7_A 5 ILYGIDASPPVRAVKLTLAALQLPYDYKIVNLMN 38 (228)
T ss_dssp EEEECTTCHHHHHHHHHHHHHTCCCEEEECCTTT
T ss_pred EEEECCCChHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 344556676 5544 467799999998877654
No 40
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=20.44 E-value=1.8e+02 Score=19.87 Aligned_cols=33 Identities=9% Similarity=0.094 Sum_probs=23.7
Q ss_pred CCeEEEccCCHH--HH-HHHHhcCCceEEEeCCCCC
Q 033281 37 PIKIILGSSSMA--RK-EILAEMGYEFTVVTAEIDE 69 (122)
Q Consensus 37 ~~~iILASsSPr--R~-eLL~~lGi~FeVi~sdiDE 69 (122)
++++.-...||+ |. -+|+..|++|+.+..+.++
T Consensus 3 ~~~Ly~~~~sp~~~~v~~~l~~~gi~~~~~~v~~~~ 38 (218)
T 3ir4_A 3 AMKLYIYDHCPFCVKARMIFGLKNIPVELNVLQNDD 38 (218)
T ss_dssp CCEEEECTTCHHHHHHHHHHHHHTCCCEEEECCTTC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCceEEEECCCcc
Confidence 367777777864 32 3566699999999888754
Done!